RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTMR10 (Homo sapiens)

Ensembl gene IDs: ENSG00000166912

Ensembl transcript IDs: ENST00000435680.6, ENST00000563714.5, ENST00000564787.1, ENST00000565728.5, ENST00000566338.5, ENST00000566981.1, ENST00000567567.5, ENST00000568547.5, ENST00000568604.5, ENST00000568611.5, ENST00000621195.3

Found 711 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGCGTTaGAGTACATCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: TPVSPRCRCGEGRWR*STSCSGPAPHSRPP
Trigger: TGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR GCA 90 bp CCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTaGCTAGCCCAGGGCCTTACGGCTGAGGCTGAAGACCCCGGAGCT +
Preference number: 1 (lower is better)
Translates to: PDQGQNSGFPLPRSH*LAQGLTAEAEDPGA
Trigger: AGCTCCGGGGTCTTCAGCCTCAGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR GCA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTaGGCTGTTGCCGCAGCATCCTGCTCAGTACGTCGACTTCATCAG +
Preference number: 1 (lower is better)
Translates to: SCSGPAPHSRPPGGH*AVAAASCSVRRLHQ
Trigger: CTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 90 bp AATGAGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTaGGGGCCGCTGGCGTTGAAGTACATCCTGCTCTGGCCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: NEEERNSGVPEVSVW*GPLALKYILLWPSS
Trigger: GGAGCTGGGCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 90 bp GTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTaGCGGCAGAGGTGGTATAAGCAGCTTCACCCTGGCCCGACTGAA +
Preference number: 1 (lower is better)
Translates to: VRPVQPHHCCHHMSL*RQRWYKQLHPGPTE
Trigger: TTCAGTCGGGCCAGGGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR GCA 90 bp CATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCATCAGCCAGGAGGGAGAGCTTGTGAA +
Preference number: 1 (lower is better)
Translates to: HSRPPGGHCAVAAAS*SVRRLHQPGGRACE
Trigger: TTCACAAGCTCTCCCTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGGCCTGCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 90 bp GATCACGGTTACAAGAGCCAGACCGTGCTTTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAGGTGCCAAACAGTGAGATCCGGGTG +
Preference number: 1 (lower is better)
Translates to: DHGYKSQTVLCFTRW*GELNRKVPNSEIRV
Trigger: CACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTCTGGCTCTTGTAACCGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568547.5
3UTR TCA 90 bp CTTCACTCGCTGGTGAGGGGAGTTGAACAGGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATACAACACTGCCAGGTAGGTTTCGGA +
Preference number: 1 (lower is better)
Translates to: LHSLVRGVEQEGAKQ*DPGAVIQHCQVGFG
Trigger: TCCGAAACCTACCTGGCAGTGTTGTATGACAGCACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR TCA 90 bp ACAAGAGCCAGACCGTGCTTTGCTTCACTCGCTGGTGAGGGGAGTTaGACAGGAAGGTGCCAAACAGTGAGATCCGGGTGCTGTCATACA +
Preference number: 1 (lower is better)
Translates to: TRARPCFASLAGEGS*TGRCQTVRSGCCHT
Trigger: TGTATGACAGCACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTCTGGCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568547.5
3UTR CCA 90 bp CCATTTTACAGGTTAGCAACCTGGACTCTCAGGCTGAAGCCTGAGTaGAACATGGGCCTAGCACTTTTCCCAGACCAGGGCCAGAACTCA +
Preference number: 1 (lower is better)
Translates to: PFYRLATWTLRLKPE*NMGLALFPDQGQNS
Trigger: TGAGTTCTGGCCCTGGTCTGGGAAAAGTGCTAGGCCCATGTTCCACTCAGGCTTCAGCCTGAGAGTCCAGGTTGCTAACCTGTAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR TCA 90 bp AGATCCATTTTACAGGTTAGCAACCTGGACTCTCAGGCTGAAGCCTaGGTGGAACATGGGCCTAGCACTTTTCCCAGACCAGGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: RSILQVSNLDSQAEA*VEHGPSTFPRPGPE
Trigger: TTCTGGCCCTGGTCTGGGAAAAGTGCTAGGCCCATGTTCCACTCAGGCTTCAGCCTGAGAGTCCAGGTTGCTAACCTGTAAAATGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR GCA 90 bp AATGGGGCTTTAGTAAATCAGGCTTGCAGGCTCAAAGCTGCAATCTaGCCACTCTCAGGTACTGAGACTTTGTGGGCCTCAGACACCAGG +
Preference number: 1 (lower is better)
Translates to: NGALVNQACRLKAAI*PLSGTETLWASDTR
Trigger: CCTGGTGTCTGAGGCCCACAAAGTCTCAGTACCTGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR CCA 90 bp CAGCACGCCTCCCAGCAAGCCTTGTTTGTTTTTGAGGGCGAGTTTTaGCATAGATGGCACTCTCCTGTCTACAGCATACACCTCTGTGGA +
Preference number: 1 (lower is better)
Translates to: QHASQQALFVFEGEF*HRWHSPVYSIHLCG
Trigger: TCCACAGAGGTGTATGCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGCGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR TCA 90 bp TTTCCAGGGGGAAGTGCCAGCAATAGTTTACCACACTGGAAATACTaGTGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTTGTTTGTTTT +
Preference number: 1 (lower is better)
Translates to: FPGGSASNSLPHWKY*WPSPARLPASLVCF
Trigger: AAAACAAACAAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAGTATTTCCAGTGTGGTAAACTATTGCTGGCACTTCCCCCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR GCA 90 bp AAGACACTGTACACCTTTACGTTCAATACTAGAAATTTCACCCAGTaGATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: KTLYTFTFNTRNFTQ*ISICAAFPQHGLCW
Trigger: CCAGCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAAAGGTGTACAGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR CCA 90 bp TCCCAGCAAGCCTTGTTTGTTTTTGAGGGCGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGCATACACCTCTGTGGAATCAGCACC +
Preference number: 1 (lower is better)
Translates to: SQQALFVFEGEFWHR*HSPVYSIHLCGIST
Trigger: GGTGCTGATTCCACAGAGGTGTATGCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR CCA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCCACCACCAGCTCCATTACCTCCTCC +
Preference number: 1 (lower is better)
Translates to: CPLDFSVPIRVSFKE*SFLAAATTSSITSS
Trigger: GGAGGAGGTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
3UTR TCA 90 bp ATGTTTTTGCTTATAGCAAATTCCGTGCTTTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAGGTGCCAAACAGTGAGATCCGGGTG +
Preference number: 1 (lower is better)
Translates to: MFLLIANSVLCFTRW*GELNRKVPNSEIRV
Trigger: CACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCTATAAGCAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CCA 90 bp CCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTG +
Preference number: 1 (lower is better)
Translates to: PRHLSASVVGSRWVK*HFGSEWFQVWLETL
Trigger: CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR TCA 90 bp GGTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGA +
Preference number: 1 (lower is better)
Translates to: GLHGICQLLLLVRGG*NGTLVQNGFKFGLR
Trigger: TCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CCA 90 bp GAAGTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTaGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTC +
Preference number: 1 (lower is better)
Translates to: EVAQFPQFYVCSRDT*QNNTVQVGGFGKPF
Trigger: GAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CCA 90 bp CAATGGTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTaGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTT +
Preference number: 1 (lower is better)
Translates to: QWSPRHLSASVVGSR*VKWHFGSEWFQVWL
Trigger: AAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CCA 90 bp GGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTaGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: GILLPTKEWEKIFRS*SAKELGTTMYSGRQ
Trigger: TTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR GCA 90 bp GTGGATGAGTGGGCATCTTTCACTCACAAATTAATGAATTCTGACTaGAGTGTGTGGAAATTTCAGGCTCCTTTTGATCTTAAAGATGCA +
Preference number: 1 (lower is better)
Translates to: VDEWASFTHKLMNSD*SVWKFQAPFDLKDA
Trigger: TGCATCTTTAAGATCAAAAGGAGCCTGAAATTTCCACACACTGCAGTCAGAATTCATTAATTTGTGAGTGAAAGATGCCCACTCATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR TCA 90 bp TGCTGCCTGTACTTCTTGAATATTAGGCAAGGTCTTATCCAAATCTaGTTTGTAAACATCACTTCTCTGTGGGTGACTTTTAGTTATTGC +
Preference number: 1 (lower is better)
Translates to: CCLYFLNIRQGLIQI*FVNITSLWVTFSYC
Trigger: GCAATAACTAAAAGTCACCCACAGAGAAGTGATGTTTACAAATCAGATTTGGATAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR CCA 90 bp GGCTTTGGTTTTAATATCAATGAATTTCTCCTTGGAAGTAATTCTTaGTCACTGATGATTCCATTCTTTAAGGCAGACGGCATTCCTCTT +
Preference number: 1 (lower is better)
Translates to: GFGFNINEFLLGSNS*SLMIPFFKADGIPL
Trigger: AAGAGGAATGCCGTCTGCCTTAAAGAATGGAATCATCAGTGACCAAGAATTACTTCCAAGGAGAAATTCATTGATATTAAAACCAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CAA 90 bp CTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTaGCCGCAGCATCCTGCTCAGTACGTCGACTTCATCAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LAQLPIAGLQGATAL*PQHPAQYVDFISQE
Trigger: CTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGTCCAAAGTTGGGGGCTaGGGGAGCACTTCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQSKVGG*GSTSVA
Trigger: AGCGACAGAAGTGCTCCCCCAGCCCCCAACTTTGGA...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGCACCACATGTCCCTCTaGCGGCAGAGGTGGTATAAG +
Preference number: 2 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQHHMSL*RQRWYK
Trigger: CTTATACCACCTCTGCCGTCAGAGGGACATGTGGTG...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCAGGAGTGTGGGGGAGGTaGTGCCCCGTTTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: CDGATQADLGLGNPAEVAGVWGR*CPVSLL
Trigger: CAGCAGTGAAACGGGGCACCACCTCCCCCACACTCC...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCCAGCACGGGCTCTGCTaGCGGGCAGCAGGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSQHGLC*RAAGVL
Trigger: CAGCACCCCTGCTGCCCGCCAGCAGAGCCCGTGCTG...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGCCACACTGGAAATACTaGTGGCCAAGCCCAGCACGC +
Preference number: 2 (lower is better)
Translates to: APCAATPLLSPHVPLTAEPHWKY*WPSPAR
Trigger: GCGTGCTGGGCTTGGCCATCAGTATTTCCAGTGTGG...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 2 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGGGCCACTGCGCTGTTaGCGCAGCATCCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSGPLRC*RSILLS
Trigger: ACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCAGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 2 (lower is better)
Translates to: CDGATQADLGLGNPAEVAEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCAGCATACACCTCTGTaGAATCAGCACCCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSQHTPL*NQHPRG
Trigger: GCCTCTGGGGTGCTGATTCCACAGAGGTGTATGCTG...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVCFTRW*GELNRK
Trigger: CTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCA...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGC +
Preference number: 2 (lower is better)
Translates to: APCAATPLLSPHVPLTAEEFWHR*HSPVYS
Trigger: GCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTC...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGTCCTTTGCTGTAAACTaGAGAGACCAGTCCCAAACA +
Preference number: 2 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWSFAVN*RDQSQT
Trigger: TGTTTGGGACTGGTCTCTCCAGTTTACAGCAAAGGA...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTGGCTGTCGGTTTGCTaGGCTGGATCTGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSWLSVC*AGSGFG
Trigger: ACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCAT +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSVAAAS*SVRRLH
Trigger: ATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAAC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp CAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGTCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGG +
Preference number: 2 (lower is better)
Translates to: QNSGFPLPRSHCLAQGLTSRWVK*HFGSEW
Trigger: CCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA...CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CCA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTGTTGTTGGTTCGAGGTaGGTGAAATGGCACTTTGGT +
Preference number: 2 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTAVVGSR*VKWHFG
Trigger: ACCAAAGTGCCATTTCACCCACCTCGAACCAACAAC...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CCA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAAGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CAA 90 bp CTGATGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTTGTTTGTTTTaGAGGGCGAGTTTTGGCATAGATGGCACTCTCCTGTCTACAGCA +
Preference number: 2 (lower is better)
Translates to: LMAKPSTPPSKPCLF*RASFGIDGTLLSTA
Trigger: TGCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCGGGCAGCAGGGGTGCTaGGCTCTCTCTAGTGCGCCC +
Preference number: 2 (lower is better)
Translates to: LRSILEISPSASASVRHSGQQGC*ALSSAP
Trigger: GGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCC...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCAGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: CDGATQADLGLGNPAEVAAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCATCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 2 (lower is better)
Translates to: CDGATQADLGLGNPAEVASSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR GCA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCAACTTTCCTGTTGTCTaGTGCCTGGGGCTGCTAATG +
Preference number: 2 (lower is better)
Translates to: NFTQCISICAAFPQHGLCNFPVV*CLGLLM
Trigger: CATTAGCAGCCCCAGGCAGCAGACAACAGGAAAGTT...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGGTGCCCCGTTTCACTaGTGTAAGAAGCTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSGAPFH*CKKLQL
Trigger: AAGCTGAAGCTTCTTACAGCAGTGAAACGGGGCACC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 2 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 2 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCAGAGGAACAAGACTCTaGGGACTCCTGGCTATGAAG +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSRGTRL*GLLAMK
Trigger: CTTCATAGCCAGGAGTCCCCAGAGTCTTGTTCCTCT...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGATTTCAAAACACAGTaGTCTAAGGTTCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: APCAATPLLSPHVPLTAEDFKTQ*SKVPKK
Trigger: CTTCTTTGGAACCTTAGATCACTGTGTTTTGAAATC...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp GCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: AEDPGAHYEGNPLPRKASLVRGG*NGTLVQ
Trigger: CTGAACCAAAGTGCCATTTCACCCACCTCGAACCAA...GGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CCA 90 bp CGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAATCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGG +
Preference number: 2 (lower is better)
Translates to: RLRLKTPELTMRAILFLESRWVK*HFGSEW
Trigger: CCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA...TTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CAA 90 bp GAAATACTGATGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTTGTTaGTTTTTGAGGGCGAGTTTTGGCATAGATGGCACTCTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: EILMAKPSTPPSKPC*FLRASFGIDGTLLS
Trigger: AGACAGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAGTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR CAA 90 bp ACTGGAAATACTGATGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAGTTTTGGCATAGATGGCACTCTCCT +
Preference number: 2 (lower is better)
Translates to: TGNTDGQAQHASQQA*FVFEGEFWHRWHSP
Trigger: AGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAGTATTTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTTTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: TPELTMRAILFLERLPEGLVRGG*NGTLVQ
Trigger: CTGAACCAAAGTGCCATTTCACCCACCTCGAACCAA...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR GCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: APCAATPLLSPHVPLTAEVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCGGAGTGTGGGGGAGGTaGTGCCCCGTTTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: LRSILEISPSASASVRHSGVWGR*CPVSLL
Trigger: CAGCAGTGAAACGGGGCACCACCTCCCCCACACTCC...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 2 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp ATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 2 (lower is better)
Translates to: MCVPETRGRITPCRLAGLWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...CAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGGGGCCACTGCGCTGTTaGCGCAGCATCCTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRGPLRC*RSILLS
Trigger: ACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCC...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATAGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: AVIQHCQVGFGELKSCRIVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CCA 90 bp ATGGGCCTAGCACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTGGTGAAATGGCACTTTaGTTCAGAATGGTTTCAAGT +
Preference number: 2 (lower is better)
Translates to: MGLALFPDQGQNSGFPLPGEMAL*FRMVSS
Trigger: ACTTGAAACCATTCTGAACCAAAGTGCCATTTCACC...AGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTGCTAGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR-3UTR CCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 2 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCAAAAAGGGAGAATTGTaGTTACACTGTCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: NFTQCISICAAFPQHGLCKKGEL*LHCQWQ
Trigger: CTGCCATTGACAGTGTAATCACAATTCTCCCTTTTT...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTGGGATACAGTCATTTaGGTTAAAAAGGGAATGACC +
Preference number: 2 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSWDTVI*VKKGMT
Trigger: GGTCATTCCCTTTTTAACTCAAATGACTGTATCCCA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR TCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAAGTTCAAGAGTGGATaGGTGGGCATCTTTCACTCA +
Preference number: 2 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTKFKSG*VGIFHS
Trigger: TGAGTGAAAGATGCCCACTCATCCACTCTTGAACTT...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR GCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 2 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CAA 90 bp GTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTaGGAAAACCATTCTCTAAAATACTGCTCCGTATCACTGTTCTGG +
Preference number: 2 (lower is better)
Translates to: VPETRGRITPCRLAG*ENHSLKYCSVSLFW
Trigger: CCAGAACAGTGATACGGAGCAGTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAAGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 2 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 2 (lower is better)
Translates to: TRGRITPCRLAGLENHSLTDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...TAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 2 (lower is better)
Translates to: GRITPCRLAGLENHSLKYEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGTGCATCAGCATCTGTaGGGCATTCCCTCAGCACGG +
Preference number: 2 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNVHQHL*GIPSAR
Trigger: CCGTGCTGAGGGAATGCCGCACAGATGCTGATGCAC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 2 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACTTGCAGGCTCAAAGCTaGAATCTGCCCACTCTCAGG +
Preference number: 2 (lower is better)
Translates to: GRITPCRLAGLENHSLKYLQAQS*NLPTLR
Trigger: CCTGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAA...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGGGCCTAGGACTTTCTaGTTCCTCTTGTGGTCGTTT +
Preference number: 2 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKGPRTF*FLLWSF
Trigger: AAACGACCACAAGAGGAAGCAGAAAGTCCTAGGCCC...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR-3UTR CCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACTACTATCAGCCTGAATaGGGGCGGGATGAGAGTACC +
Preference number: 2 (lower is better)
Translates to: GRITPCRLAGLENHSLKYYYQPE*GRDEST
Trigger: GGTACTCTCATCCCGCCCCCATTCAGGCTGATAGTA...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR TCA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATACATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 2 (lower is better)
Translates to: AVIQHCQVGFGELKSCRIHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp CATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTCAACTTTCCTGTTGTCTaGTGCCTGGGGCTGCTAATG +
Preference number: 2 (lower is better)
Translates to: HHLNKRSYTTAQVSSFLLNFPVV*CLGLLM
Trigger: CATTAGCAGCCCCAGGCAGCAGACAACAGGAAAGTT...GAGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp ACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 2 (lower is better)
Translates to: TCPLDFSVPIRVSFKEWSKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...ACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
3UTR-3UTR GCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCGGACATCTGTGCAGGTaGCCAACTCGTAACCTCATT +
Preference number: 2 (lower is better)
Translates to: LRSILEISPSASASVRHSGHLCR*PTRNLI
Trigger: AATGAGGTTACGAGTTGGGCACCTGCACAGATGTCC...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 2 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAATCTGTATACAAGGTGTaGTCTTTCCAATGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKSVYKV*SFQCRR
Trigger: CCTTCTACATTGGAAAGAGCACACCTTGTATACAGA...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGAGGCCACTCCCCAGTaGCTTTCAGAGGAACAAGAC +
Preference number: 2 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLEATPQ*LSEEQD
Trigger: GTCTTGTTCCTCTGAAAGCCACTGGGGAGTGGCCTC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATACTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 2 (lower is better)
Translates to: AVIQHCQVGFGELKSCRILTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp CCTAAAATAGGGATCCAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 2 (lower is better)
Translates to: PKIGIQHHLNKRSYTTAQKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...TTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCCCTATTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR CAA 90 bp TTTATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTaGGCGGGTTTGGAAAACCATTCTCTAAAATACTGCTCCGTATCA +
Preference number: 2 (lower is better)
Translates to: FMCVPETRGRITPCR*AGLENHSLKYCSVS
Trigger: TGATACGGAGCAGTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp GGGGCTTTAGTAAATCAGGCTTGCAGGCTCAAAGCTGCAATCTGCCCACTCTCATTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 2 (lower is better)
Translates to: GALVNQACRLKAAICPLSFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...TGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCAGAGAAGGACATCTGTaGAGGTGCCCAACTCGTAAC +
Preference number: 2 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCREGHL*RCPTRN
Trigger: GTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCT...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTAGAGGAACAAGACTCTaGGGACTCCTGGCTATGAAG +
Preference number: 2 (lower is better)
Translates to: ERFRSSKQLCLLILLNFARGTRL*GLLAMK
Trigger: CTTCATAGCCAGGAGTCCCCAGAGTCTTGTTCCTCT...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 2 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 2 (lower is better)
Translates to: GRITPCRLAGLENHSLKYLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGTGTTCCAGAGACACGTaGCAGAATAACACCGTGCAG +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRCSRDT*QNNTVQ
Trigger: CTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTCACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 2 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CCA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKEISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR-3UTR GCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCATACTTCCTAAAACCTaGTGGAGGTTTTATCAGATG +
Preference number: 2 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLILPKT*WRFYQM
Trigger: CATCTGATAAAACCTCCAGCAGGTTTTAGGAAGTAT...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGGACATCTGTGCAGGTaGCCAACTCGTAACCTCATT +
Preference number: 2 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWGHLCR*PTRNLI
Trigger: AATGAGGTTACGAGTTGGGCACCTGCACAGATGTCC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATAAGGGTGCGATCCTTTaGTGTAAACTGGAGAGACCA +
Preference number: 2 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNKGAIL*CKLERP
Trigger: TGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTT...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGC +
Preference number: 2 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNEFWHR*HSPVYS
Trigger: GCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATTTTGAGGGCGAGTTTTaGCATAGATGGCACTCTCCT +
Preference number: 2 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNFEGEF*HRWHSP
Trigger: AGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAA...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATTGGCAGGATACGCTGTaGTGTTATAAGGAGATTGGG +
Preference number: 2 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNWQDTL*CYKEIG
Trigger: CCCAATCTCCTTATAACACCACAGCGTATCCTGCCA...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 2 (lower is better)
Translates to: CLLSSMYTSSAECLRNALAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTTCAAGAGTGGATGAGTaGGCATCTTTCACTCACAAA +
Preference number: 2 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPSRVDE*ASFTHK
Trigger: TTTGTGAGTGAAAGATGCCCACTCATCCACTCTTGA...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR TCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGTGTTTGGTTACGTGTaGGCCAACATCACGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNVFGYV*ANITFC
Trigger: ACAAAACGTGATGTTGGCTCACACGTAACCAAACAC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR TCA 90 bp AGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGTGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 2 (lower is better)
Translates to: STCPLDFSVPIRVSFKEWCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...CCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR-3UTR TCA 90 bp CCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 2 (lower is better)
Translates to: PLDFSVPIRVSFKEWSFLSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...CAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR-3UTR GCA 90 bp CTTTTCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTATACAAGGTGTGGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: LFFVRLKDFTEPFCIQGVAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...CACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTGGCAGGATACGCTGTaGTGTTATAAGGAGATTGGG +
Preference number: 2 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLWQDTL*CYKEIG
Trigger: CCCAATCTCCTTATAACACCACAGCGTATCCTGCCA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CCA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGTCTGACTGCAGTGTGTaGAAATTTCAGGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLSDCSV*KFQAPF
Trigger: AAAAGGAGCCTGAAATTTCCACACACTGCAGTCAGA...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR TCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTTGCTCATCCCACTTaGACTCAAGTCATCAATTTT +
Preference number: 2 (lower is better)
Translates to: LRSILEISPSASASVRHSLAHPT*TQVINF
Trigger: AAAATTGATGACTTGAGTTCAAGTGGGATGAGCAAG...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR TCA 90 bp CATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTCTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 2 (lower is better)
Translates to: HHLNKRSYTTAQVSSFLLSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...GAGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp CTGCTTCAGTTTTACAAATGCTGCCTGTACTTCTTGAATATTAGGCAAGGTCTTTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 2 (lower is better)
Translates to: LLQFYKCCLYFLNIRQGLSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCATTTGTAAAACTGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAAGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: RGRITPCRLAGLENHSLKVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGTATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACCAAGAAATGGATAAATaGGGCTTTAGTAAATCAGGC +
Preference number: 2 (lower is better)
Translates to: GRITPCRLAGLENHSLKYQEMDK*GFSKSG
Trigger: GCCTGATTTACTAAAGCCCCATTTATCCATTTCTTG...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CCA 90 bp ACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 2 (lower is better)
Translates to: TCPLDFSVPIRVSFKEWSFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...ACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR CAA 90 bp CTCAAGTCTCTTCCTTCCTCCTCTTGTAGGACTACAGAGAGATGTTaGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: LKSLPSSSCRTTERC*LSSMYTSSAECLRN
Trigger: ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGAGGAGGAAGGAAGAGACTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR TCA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATAAAAAGGGAGAATTGTaGTTACACTGTCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNKKGEL*LHCQWQ
Trigger: CTGCCATTGACAGTGTAATCACAATTCTCCCTTTTT...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 2 (lower is better)
Translates to: LSSMYTSSAECLRNALTYSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR GCA 90 bp CATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTCTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 2 (lower is better)
Translates to: HHLNKRSYTTAQVSSFLLSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...GAGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp AAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGAGGAGAGGTAGGAAAAATGGATaGAGACAAAAATGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: KCFVCTDSLQEKMEMRRRGRKNG*RQKCSR
Trigger: TCTGCTACATTTTTGTCTCCATCCATTTTTCCTACC...TCTCCTCCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGTTCTATCAAGAACAATaGCAAACTGAACAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRFYQEQ*QTEQRQ
Trigger: CTGCCTCTGTTCAGTTTGCCATTGTTCTTGATAGAA...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR TCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGATTTCAAAACACAGTaGTCTAAGGTTCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: ERFRSSKQLCLLILLNFADFKTQ*SKVPKK
Trigger: CTTCTTTGGAACCTTAGATCACTGTGTTTTGAAATC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 2 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CCA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTTTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 2 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR-3UTR CCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGGTAGGAAAAATGGATaGAGACAAAAATGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWGRKNG*RQKCSR
Trigger: TCTGCTACATTTTTGTCTCCATCCATTTTTCCTACC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR GCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTTCCATTAATTTTGTTTaGTGCCTGCAAAAAGGACTT +
Preference number: 2 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLSINFV*CLQKGL
Trigger: AAGTCCTTTTTGCAGGCAGCAAACAAAATTAATGGA...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTTAATGAATTCTGACTaGAGTGTGTGGAAATTTCAG +
Preference number: 2 (lower is better)
Translates to: LSSMYTSSAECLRNALTYLMNSD*SVWKFQ
Trigger: CTGAAATTTCCACACACTGCAGTCAGAATTCATTAA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR GCA 72 bp GGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTaGGCTGTTGCCGCAGCATCCTGCTCAGTACGTCGA +
Preference number: 3 (lower is better)
Translates to: GPAPHSRPPGGH*AVAAASCSVRR
Trigger: TCGACGTACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 72 bp TCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGCGTTaGAGTACATCCTGCTCTGGCCCAGCTCCCCATAGC +
Preference number: 3 (lower is better)
Translates to: SPRCRCGEGRWR*STSCSGPAPHS
Trigger: GCTATGGGGAGCTGGGCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTCACCACACCGACACCTCGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGCTTTGCTGTCCAAAGTaGGGGGCTGGGGGAGCACTT +
Preference number: 3 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQLCCPK*GAGGAL
Trigger: AAGTGCTCCCCCAGCCCCCAACTTTGGACAGCAAAG...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR GCA 72 bp CCTCCAGGGGGCCACTGCGCTGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCATCAGCCAGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: PPGGHCAVAAAS*SVRRLHQPGGR
Trigger: TCTCCCTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 72 bp GAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTaGGGGCCGCTGGCGTTGAAGTACATCCTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: ERNSGVPEVSVW*GPLALKYILLW
Trigger: CCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR TCA 72 bp GTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTaGCGGCAGAGGTGGTATAAGCAGCTTCACCCTGGC +
Preference number: 3 (lower is better)
Translates to: VQPHHCCHHMSL*RQRWYKQLHPG
Trigger: GCCAGGGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCTCATTCTCCTCAACTTaGCTGTCCAAAGTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSSFSST*LSKVGG
Trigger: GCCCCCAACTTTGGACAGCAAAGTTGAGGAGAATGA...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCGTTCTGGCTGTCGGTTaGCTGAGCTGGATCTGGCTT +
Preference number: 3 (lower is better)
Translates to: NFTQCISICAAFPQHGLCVLAVG*LSWIWL
Trigger: AAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAAC...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR CCA 72 bp AGGTTAGCAACCTGGACTCTCAGGCTGAAGCCTGAGTaGAACATGGGCCTAGCACTTTTCCCAGACCAGGGC +
Preference number: 3 (lower is better)
Translates to: RLATWTLRLKPE*NMGLALFPDQG
Trigger: GCCCTGGTCTGGGAAAAGTGCTAGGCCCATGTTCCACTCAGGCTTCAGCCTGAGAGTCCAGGTTGCTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR CCA 72 bp ATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGCATCCTTCTCCCAACA +
Preference number: 3 (lower is better)
Translates to: MRAIRTRALPLE*LQHQSGILLPT
Trigger: TGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTATGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 3 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAATAACACCGTGCAGGTaGGCGGGTTTGGAAAACCAT +
Preference number: 3 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVITPCR*AGLENH
Trigger: ATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTAT...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGCCCAATTGGATGTTTTaGCTTATAGCAAATTCCGTG +
Preference number: 3 (lower is better)
Translates to: APCAATPLLSPHVPLTAEPNWMF*LIANSV
Trigger: CACGGAATTTGCTATAAGCAAAAACATCCAATTGGG...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR TCA 72 bp GGAAGTGCCAGCAATAGTTTACCACACTGGAAATACTaGTGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: GSASNSLPHWKY*WPSPARLPASL
Trigger: AAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAGTATTTCCAGTGTGGTAAACTATTGCTGGCACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCATTCCTAACTTTCCTGTaGTCTGCTGCCTGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPFLTFL*SAAWGC
Trigger: GCAGCCCCAGGCAGCAGACAACAGGAAAGTTAGGAA...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR TCA 72 bp TTACAGGTTAGCAACCTGGACTCTCAGGCTGAAGCCTaGGTGGAACATGGGCCTAGCACTTTTCCCAGACCA +
Preference number: 3 (lower is better)
Translates to: LQVSNLDSQAEA*VEHGPSTFPRP
Trigger: TGGTCTGGGAAAAGTGCTAGGCCCATGTTCCACTCAGGCTTCAGCCTGAGAGTCCAGGTTGCTAACCTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR CCA 72 bp GGCCACTCCCCAGTGGCTTTCAGAGGAACAAGACTCTaGGGACTCCTGGCTATGAAGCTTAGTATGAAAAGC +
Preference number: 3 (lower is better)
Translates to: GHSPVAFRGTRL*GLLAMKLSMKS
Trigger: GCTTTTCATACTAAGCTTCATAGCCAGGAGTCCCCAGAGTCTTGTTCCTCTGAAAGCCACTGGGGAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAAAGCAAATTCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKSKFRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCT...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCAGCCAACATCACGTTTaGTTAGCTGTGATTTACCTT +
Preference number: 3 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSSQHHV*LAVIYL
Trigger: AAGGTAAATCACAGCTAACAAAACGTGATGTTGGCT...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCGGTTTCAAGTTTGGCTaGAGACCCTGCTTAGTCATA +
Preference number: 3 (lower is better)
Translates to: AEDPGAHYEGNPLPRKASGFKFG*RPCLVI
Trigger: TATGACTAAGCAGGGTCTCAAGCCAAACTTGAAACC...GGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CAA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCAAGCCTTGTTTGTTTTaGAGGGCGAGTTTTGGCATA +
Preference number: 3 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTKPCLF*RASFGI
Trigger: TATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTT...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTCTTGCTCATCCCACTaGAACTCAAGTCATCAATTT +
Preference number: 3 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSSCSSH*NSSHQF
Trigger: AAATTGATGACTTGAGTTCAAGTGGGATGAGCAAGA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAATGGTCTCCACGGCATTaGTCAGCTTCTGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: ELTMRAILFLERLPEGPQWSPRH*SASVVG
Trigger: ACCAACAACAGAAGCTGACAAATGCCGTGGAGACCA...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CAA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 3 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR CCA 72 bp CAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTaGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGA +
Preference number: 3 (lower is better)
Translates to: QFPQFYVCSRDT*QNNTVQVGGFG
Trigger: TCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATCATTCTCCTCAACTTaGCTGTCCAAAGTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RGRITPCRLAGLENHSLKSFSST*LSKVGG
Trigger: GCCCCCAACTTTGGACAGCAAAGTTGAGGAGAATGA...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCAGCAAGCAGATTTTGTaGACAAATGTGAACAGCTTT +
Preference number: 3 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSSKQIL*TNVNSF
Trigger: AAAGCTGTTCACATTTGTCAACAAAATCTGCTTGCT...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR TCA 72 bp TCCATTACCTCCTCCTCCTCCTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTTGTTTGCTGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: SITSSSSSSSIS*GNSINFVCCLQ
Trigger: TTGCAGGCAGCAAACAAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGAGGAGGAGGAGGAGGTAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR GCA 72 bp TACACCTTTACGTTCAATACTAGAAATTTCACCCAGTaGATCAGCATCTGTGCGGCATTCCCTCAGCACGGG +
Preference number: 3 (lower is better)
Translates to: YTFTFNTRNFTQ*ISICAAFPQHG
Trigger: CCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAAAGGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR GCA 72 bp AATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTaGTGTAAACTGGAGAGACCAGTCCCAAACAGAGGG +
Preference number: 3 (lower is better)
Translates to: NVEGVMEKGAIL*CKLERPVPNRG
Trigger: CCCTCTGTTTGGGACTGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CCA 72 bp GCCTTGTTTGTTTTTGAGGGCGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGCATACACCTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: ALFVFEGEFWHR*HSPVYSIHLCG
Trigger: TCCACAGAGGTGTATGCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR CCA 72 bp TCAATGGTCTCCACGGCATTTGTCAGCTTCTGTTGTTaGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGA +
Preference number: 3 (lower is better)
Translates to: SMVSTAFVSFCC*FEVGEMALWFR
Trigger: TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CAA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAG +
Preference number: 3 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNASQQA*FVFEGE
Trigger: CTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGC...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGAGCAAATTCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLSKFRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCT...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp ATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGCCCAATTGGATGTTTTaGCTTATAGCAAATTCCGTG +
Preference number: 3 (lower is better)
Translates to: MCVPETRGRITPCRLAGLPNWMF*LIANSV
Trigger: CACGGAATTTGCTATAAGCAAAAACATCCAATTGGG...CAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCCTGAAAAAGAGGTGTTaGGTTACGTGTGAGCCAACA +
Preference number: 3 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLLKKRC*VTCEPT
Trigger: TGTTGGCTCACACGTAACCAAACACCTCTTTTTCAG...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAG +
Preference number: 3 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLASQQA*FVFEGE
Trigger: CTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTCAGGTACTGAGACTTaGTGGGCCTCAGACACCAGG +
Preference number: 3 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLSGTET*WASDTR
Trigger: CCTGGTGTCTGAGGCCCACAAAGTCTCAGTACCTGA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR GCA 72 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTaGCCAACTCGTAACCTCATTAGTTATTTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: ALGTMREGHLCR*PTRNLISYFQG
Trigger: CCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR GCA 72 bp ATTGCATTACAAATCCTCTGGTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGGGCCATTCGCACAAGA +
Preference number: 3 (lower is better)
Translates to: IALQILWSIFLC*STSLMRAIRTR
Trigger: TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR GCA 72 bp GTTATTGCATTACAAATCCTCTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATGAGGGCCATTCGCACA +
Preference number: 3 (lower is better)
Translates to: VIALQILWSIFL*CSTSLMRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGCAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR GCA 72 bp ATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTaGAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAA +
Preference number: 3 (lower is better)
Translates to: MCVPETRGRITP*RLAGLENHSLK
Trigger: TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR CCA 72 bp GGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATaGTTTCAAGTTTGGCTTGAGACCCTGCTTAGTCAT +
Preference number: 3 (lower is better)
Translates to: GSRWVKWHFGSE*FQVWLETLLSH
Trigger: ATGACTAAGCAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CCA 72 bp CCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTaGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: PRHLSASVVGSR*VKWHFGSEWFQ
Trigger: TTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CAA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: GRITPCRLAGLENHSLKYDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTGCTTCAGTTTTACAAATGCTGCCTGTACTTCTTGAATATTAGGCAAGGTCTTTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 3 (lower is better)
Translates to: LLQFYKCCLYFLNIRQGLCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCATTTGTAAAACTGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 3 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKETFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR TCA 72 bp GATGGTTGCATCTGTCTAGAAACTGATATCCTGCCATaGCCCACTCCTTCTGTATCAGACTCTGAAATCCAG +
Preference number: 3 (lower is better)
Translates to: DGCICLETDILP*PTPSVSDSEIQ
Trigger: CTGGATTTCAGAGTCTGATACAGAAGGAGTGGGTCATGGCAGGATATCAGTTTCTAGACAGATGCAACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR GCA 72 bp AAGAAATGGATAAATGGGGCTTTAGTAAATCAGGCTTaGAGGCTCAAAGCTGCAATCTGCCCACTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: KKWINGALVNQA*RLKAAICPLSG
Trigger: ACCTGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCCATTTATCCATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR-3UTR CAA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCGTGGTAGGTAGGCTCTaGTCACACAGTTTGGAAATA +
Preference number: 3 (lower is better)
Translates to: LRSILEISPSASASVRHSVVGRL*SHSLEI
Trigger: TATTTCCAAACTGTGTGACAAGAGCCTACCTACCAC...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp CCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 3 (lower is better)
Translates to: PLDFSVPIRVSFKEWSFLNFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...CAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564787.1
3UTR TCA 72 bp GGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAGAATGGTTTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: GICQLLLLVRGG*NGTLVQNGFKF
Trigger: AAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CCA 72 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: LSASVVGSRWVK*HFGSEWFQVWL
Trigger: AAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR-3UTR CAA 90 bp CCTAAAATAGGGATCCAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 3 (lower is better)
Translates to: PKIGIQHHLNKRSYTTAQDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...TTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCCCTATTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATAGGAATTCCATTAATTTaGTTTGCTGCCTGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: AVIQHCQVGFGELKSCRIGIPLI*FAACKK
Trigger: CTTTTTGCAGGCAGCAAACAAAATTAATGGAATTCC...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR-3UTR CAA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGTGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 3 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRCCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
3UTR-3UTR CAA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGAAGCCTTGTTTGTTTTaGAGGGCGAGTTTTGGCATA +
Preference number: 3 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWKPCLF*RASFGI
Trigger: TATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTT...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR-3UTR CAA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATTTTCTAGGCAACAAGTaGGCAAAAACCTTGGGTTTA +
Preference number: 3 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNFLGNK*AKTLGL
Trigger: TAAACCCAAGGTTTTTGCCAACTTGTTGCCTAGAAA...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR TCA 72 bp ATGAATCAAGGTGTCATCCAGAAGTTCAAGAGTGGATaGGTGGGCATCTTTCACTCACAAATTAATGAATTC +
Preference number: 3 (lower is better)
Translates to: MNQGVIQKFKSG*VGIFHSQINEF
Trigger: GAATTCATTAATTTGTGAGTGAAAGATGCCCACTCATCCACTCTTGAACTTCTGGATGACACCTTGATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR GCA 72 bp TGGGCATCTTTCACTCACAAATTAATGAATTCTGACTaGAGTGTGTGGAAATTTCAGGCTCCTTTTGATCTT +
Preference number: 3 (lower is better)
Translates to: WASFTHKLMNSD*SVWKFQAPFDL
Trigger: AAGATCAAAAGGAGCCTGAAATTTCCACACACTGCAGTCAGAATTCATTAATTTGTGAGTGAAAGATGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR TCA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTGAGGTGTCGGTGTGGTaGGGGCCGCTGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVEVSVW*GPLALK
Trigger: CTTCAACGCCAGCGGCCCTCACCACACCGACACCTC...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGGGCAGCAGGGGTGCTaGGCTCTCTCTAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAEGQQGC*ALSSAP
Trigger: GGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCC...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCAGCCGCGCTGCTGTaGGCAGGGAGACGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: QNSGFPLPRSHCLAQGLTAAALL*AGRRAQ
Trigger: CTGCGCGCGTCTCCCTGCCCACAGCAGCGCGGCTGC...CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGGTCAGTCTGGGGCGGTaGCAGGAGGTAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQVSLGR*QEVGPE
Trigger: TTCAGGTCCTACCTCCTGCCACCGCCCCAGACTGAC...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTTACGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTACGCGCGCAGCCTCCTaGGGTCCTCCAGTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LTAEAEDPGAHYEGNPLPTRAAS*GPPVPG
Trigger: CCCGGGAACTGGAGGACCCCAGGAGGCTGCGCGCGT...AGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGGGCAGAATAACACCGTaGAGGTTGGCGGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQGRITP*RLAGLE
Trigger: TTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCCCTCCAGGGGGCCACTaGGCTGTTGCCGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSPPGGH*AVAAAS
Trigger: GGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGG...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGGAGTGTGGGGGAGGTaGTGCCCCGTTTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSGVWGR*CPVSLL
Trigger: CAGCAGTGAAACGGGGCACCACCTCCCCCACACTCC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTACAGCACGGGCTCTGCTaGCGGGCAGCAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLQHGLC*RAAGVL
Trigger: CAGCACCCCTGCTGCCCGCCAGCAGAGCCCGTGCTG...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGTACTATCAGCCTGAATaGGGGCGGGATGAGAGTACC +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQYYQPE*GRDEST
Trigger: GGTACTCTCATCCCGCCCCCATTCAGGCTGATAGTA...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGCACCACATGTCCCTCTaGCGGCAGAGGTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAEHHMSL*RQRWYK
Trigger: CTTATACCACCTCTGCCGTCAGAGGGACATGTGGTG...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTGGGTTTGGGCGGCTTaGGGGAGAACATGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSWVWAA*GRTWCR
Trigger: GCGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAEEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGAAGGGTGCGATCCTTTaGTGTAAACTGGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQKGAIL*CKLERP
Trigger: TGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTT...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGTGCATCAGCATCTGTaGGGCATTCCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSVHQHL*GIPSAR
Trigger: CCGTGCTGAGGGAATGCCGCACAGATGCTGATGCAC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTAGAAATTTCACCCAGTaGATCAGCATCTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVRNFTQ*ISICAA
Trigger: TGCCGCACAGATGCTGATGCACTGGGTGAAATTTCT...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTACFTRW*GELNRK
Trigger: CTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCA...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCTGGCTGTCGGTTTGCTaGGCTGGATCTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSWLSVC*AGSGFG
Trigger: ACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCA...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGCCTAGAAAGGCTTCCTaGAGGTCCACAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QNSGFPLPRSHCLAQGLTPRKAS*RSTRAA
Trigger: GGCAGCTCTTGTGGACCTTCAGGAAGCCTTTCTAGG...CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QNSGFPLPRSHCLAQGLTVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp CACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTCTCCCTAGGTCACACTaGCTAGCCCAGGGCCTTACG +
Preference number: 4 (lower is better)
Translates to: HFSQTRARTQVSRSLGHTLPRSH*LAQGLT
Trigger: CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAG...AGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGCCCCACAAATCGTACTaGCTTGTGTCTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWPHKSY*LVSVAM
Trigger: CATTGCAACAGACACAAGCCAGTACGATTTGTGGGG...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTCCACCCAGGCTGATCTaGGCCTCGGGAACCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFPPRLI*ASGTQR
Trigger: CCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGG...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACATGGGTTTGGGCGGCTTaGGGGAGAACATGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTWVWAA*GRTWCR
Trigger: GCGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCA...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCTGGAGCCACCCAGGCTaGTCTGGGCCTCGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATWSHPG*SGPREP
Trigger: GGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCA...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR TCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAGAGGGCCGCTGGCGTTaGAGTACATCCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTEGRWR*STSCSG
Trigger: GCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTC...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGGTGTTTGGTTACGTGTaGGCCAACATCACGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWVFGYV*ANITFC
Trigger: ACAAAACGTGATGTTGGCTCACACGTAACCAAACAC...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAESIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCAT +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSVAAAS*SVRRLH
Trigger: ATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAAC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAGGGCCACTGCGCTGTTaGCGCAGCATCCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTGPLRC*RSILLS
Trigger: ACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCC...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAACCTCAGCACGGGCTCTaGTGGCGGGCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RGRITPCRLAGLENHSLKPQHGL*WRAAGV
Trigger: CACCCCTGCTGCCCGCCAGCAGAGCCCGTGCTGAGG...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAATCAGGCAGCCGCGCTaGTGTGGGCAGGGAGACGCG +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQIRQPR*CGQGDA
Trigger: CGCGTCTCCCTGCCCACAGCAGCGCGGCTGCCTGAT...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GGCCTAGCACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: GLALFPDQGQNSGFPLPRAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...CCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTGCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AEDPGAHYEGNPLPRKASALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...GGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AEAEDPGAHYEGNPLPRKALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...CTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCATGTTCCAGAGACACGTaGCAGAATAACACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CDGATQADLGLGNPAEVACSRDT*QNNTVQ
Trigger: CTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCATGGGTTTGGGCGGCTTaGGGGAGAACATGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPWVWAA*GRTWCR
Trigger: GCGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCA...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCATCTTCGGTTCCGAATTaGTCTTATCGTCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CDGATQADLGLGNPAEVASSVPN*SYRQSG
Trigger: CCCAGACTGACGATAAGATCAATTCGGAACCGAAGA...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGGATAACACATCTTCTTaGTCATCCCACTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQDNTSS*SSHLNS
Trigger: TGAGTTCAAGTGGGATGAGCAAGAAGATGTGTTATC...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGTTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAEISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCGCAGGAGGTAGGACCTaGAGGTGGGTTTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLAGGRT*RWVWAA
Trigger: AGCCGCCCAAACCCACCTTCAGGTCCTACCTCCTGC...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: HFSQTRARTQVSRSLGHTEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...AGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQCFTRW*GELNRK
Trigger: CTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCA...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTGGAGCCACCCAGGCTaGTCTGGGCCTCGGGAACCC +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLWSHPG*SGPREP
Trigger: GGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGATGGTGTTCCTAAAATaGTTCGTCTGCACAGATTCC +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAEMVFLK*FVCTDS
Trigger: GGAATCTGTGCAGACGAAGCATTTTAGGAACACCAT...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCCCCACAAATCGTACTaGCTTGTGTCTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSPHKSY*LVSVAM
Trigger: CATTGCAACAGACACAAGCCAGTACGATTTGTGGGG...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGCACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATGTTCCAGAGACACGTaGCAGAATAACACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVCSRDT*QNNTVQ
Trigger: CTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGGAGGCCACTCCCCAGTaGCTTTCAGAGGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQEATPQ*LSEEQD
Trigger: GTCTTGTTCCTCTGAAAGCCACTGGGGAGTGGCCTC...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGCAGCATACACCTCTGTaGAATCAGCACCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQQHTPL*NQHPRG
Trigger: GCCTCTGGGGTGCTGATTCCACAGAGGTGTATGCTG...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp TCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAATCCCGGGGGTCGGCCTaGAGGCTCCACGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: SVVGSRWVKWHFGSEWFQSRGSA*RLHGSA
Trigger: TGCGCTTCCGTGGAGCCTCCAGGCCGACCCCCGGGA...TTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp GCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: AEAEDPGAHYEGNPLPRKEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...CTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CTTACGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTTTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LTAEAEDPGAHYEGNPLPLVRGG*NGTLVQ
Trigger: CTGAACCAAAGTGCCATTTCACCCACCTCGAACCAA...AGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAATTGGTTCGAGGTGGGTaGAATGGCACTTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RLRLKTPELTMRAILFLELVRGG*NGTLVQ
Trigger: CTGAACCAAAGTGCCATTTCACCCACCTCGAACCAA...TTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGCTGGCTTGTGTCTGTTaGAATGCATTTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: APCAATPLLSPHVPLTAELACVC*NAFSHK
Trigger: TTTGTGAGAAAATGCATTGCAACAGACACAAGCCAG...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp ATGGGCCTAGCACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: MGLALFPDQGQNSGFPLPSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...AGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTGCTAGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGTGCATCAGCATCTGTaGGGCATTCCCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRVHQHL*GIPSAR
Trigger: CCGTGCTGAGGGAATGCCGCACAGATGCTGATGCAC...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAACAAGAGCCAGACCGTaGTTTGCTTCACTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLTRARP*FASLAG
Trigger: ACCAGCGAGTGAAGCAAAGCACGGTCTGGCTCTTGT...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568547.5
CDS-3UTR CCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCGTCAGTCTGGGGCGGTaGCAGGAGGTAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATVSLGR*QEVGPE
Trigger: TTCAGGTCCTACCTCCTGCCACCGCCCCAGACTGAC...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTAVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp CCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: PDQGQNSGFPLPRSHCLAILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...GGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGGGTAGGAAAAATGGATaGAGACAAAAATGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWGRKNG*RQKCSR
Trigger: TCTGCTACATTTTTGTCTCCATCCATTTTTCCTACC...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATCAGCACGGGCTCTGCTaGCGGGCAGCAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNQHGLC*RAAGVL
Trigger: CAGCACCCCTGCTGCCCGCCAGCAGAGCCCGTGCTG...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGATTTTCGCCGAGCCAGTaGGGGCTCCCGAGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FVSFCCWFEVGEMALWFRFSPSQ*GLPRRR
Trigger: GCGCCTTCTCGGGAGCCCCCACTGGCTCGGCGAAAA...TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563714.5
3UTR CAA 72 bp ACTGATGGCCAAGCCCAGCACGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAGTTTTGGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: TDGQAQHASQQA*FVFEGEFWHRW
Trigger: CCATCTATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGCGTGCTGGGCTTGGCCATCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSSSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCCATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: NFTQCISICAAFPQHGLCHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGATGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRCFTRW*GELNRK
Trigger: CTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCA...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATTGGAGCCACCCAGGCTaGTCTGGGCCTCGGGAACCC +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNWSHPG*SGPREP
Trigger: GGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCA...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCACACCACATGTCCCTCTaGCGGCAGAGGTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPHHMSL*RQRWYK
Trigger: CTTATACCACCTCTGCCGTCAGAGGGACATGTGGTG...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGGGCAGCAGGGGTGCTaGGCTCTCTCTAGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNGQQGC*ALSSAP
Trigger: GGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CACTTTTCCCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: HFSQTRARTQVSRSLGHTAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...AGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATCCTCCAGGGGGCCACTaGGCTGTTGCCGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNPPGGH*AVAAAS
Trigger: GGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGG...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCATGGTGTTCCTAAAATaGTTCGTCTGCACAGATTCC +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSMVFLK*FVCTDS
Trigger: GGAATCTGTGCAGACGAAGCATTTTAGGAACACCAT...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTCCTCAGCACGGGCTCTaGTGGCGGGCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLPQHGL*WRAAGV
Trigger: CACCCCTGCTGCCCGCCAGCAGAGCCCGTGCTGAGG...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAGCTCCAGCACCAGAGTaGCATCCTTCTCCCAACAAA +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTAPAPE*HPSPNK
Trigger: TTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAGC...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSEFWHR*HSPVYS
Trigger: GCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAGTTGTTGGTTCGAGGTaGGTGAAATGGCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: RLRLKTPELTMRAILFLEVVGSR*VKWHFG
Trigger: ACCAAAGTGCCATTTCACCCACCTCGAACCAACAAC...TTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTTDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTATGGCTGTCGGTTTGCTaGGCTGGATCTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TRGRITPCRLAGLENHSLWLSVC*AGSGFG
Trigger: ACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCA...TAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGGAGGGCCGCTGGCGTTaGAGTACATCCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLEGRWR*STSCSG
Trigger: GCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTC...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGAGGTGTCGGTGTGGTaGGGGCCGCTGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAEVSVW*GPLALK
Trigger: CTTCAACGCCAGCGGCCCTCACCACACCGACACCTC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAAAGGGTGCGATCCTTTaGTGTAAACTGGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLKGAIL*CKLERP
Trigger: TGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTT...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCAT +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTVAAAS*SVRRLH
Trigger: ATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAAC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGGGGCCACTGCGCTGTTaGCGCAGCATCCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLGPLRC*RSILLS
Trigger: ACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCC...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCCTAAAATGCTTCGTCTaGACAGATTCCCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: NFTQCISICAAFPQHGLCLKCFV*TDSLQE
Trigger: CTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAG...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGCTAAAATGCTTCGTCTaGACAGATTCCCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPLKCFV*TDSLQE
Trigger: CTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAG...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCGTGCAGCCACACCACTaGTGTCACCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPVQPHH*CHHMSL
Trigger: GAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCAC...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTCCCTAGGTCACACTaGCTAGCCCAGGGCCTTACG +
Preference number: 4 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETLPRSH*LAQGLT
Trigger: CGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAG...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCTTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTCCAGCACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LQHQSGILLPTKEWEKIFALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...AAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp CCAGACCAGGGCCAGAACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCTCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PDQGQNSGFPLPRSHCLASDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...GGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTCCTTTGCTGTAAACTaGAGAGACCAGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPSFAVN*RDQSQT
Trigger: TGTTTGGGACTGGTCTCTCCAGTTTACAGCAAAGGA...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGCCACCCAGGCTGATCTaGGCCTCGGGAACCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWPPRLI*ASGTQR
Trigger: CCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGG...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCTCCAAAGTTGGGGGCTaGGGGAGCACTTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPSKVGG*GSTSVA
Trigger: AGCGACAGAAGTGCTCCCCCAGCCCCCAACTTTGGA...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGGTACTGAGACTTTGTaGGCCTCAGACACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTGTETL*ASDTRK
Trigger: CTTCCTGGTGTCTGAGGCCCACAAAGTCTCAGTACC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPSSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTACGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LTAEAEDPGAHYEGNPLPAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...AGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTAFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGTDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGAGGGCCGCTGGCGTTaGAGTACATCCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAEGRWR*STSCSG
Trigger: GCCAGAGCAGGATGTACTTCAACGCCAGCGGCCCTC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCCACACTGGAAATACTaGTGGCCAAGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLPHWKY*WPSPAR
Trigger: GCGTGCTGGGCTTGGCCATCAGTATTTCCAGTGTGG...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATCTCAGGCTGAAGCCTaGGTGGAACATGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSESQAEA*VEHGPS
Trigger: GCTAGGCCCATGTTCCACTCAGGCTTCAGCCTGAGA...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAAGAACAATGGCAAACTaGACAGAGGCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPRTMAN*TEAVRR
Trigger: CCTCCTGACTGCCTCTGTTCAGTTTGCCATTGTTCT...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: TRGRITPCRLAGLENHSLEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...TAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TTACCTCCTCCTCCTCCTCCTCCTCCATCTCCTGAGGGAATTCCATTAATTTTGGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPPPPPPPPSPEGIPLILVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...CAAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGAGGAGGAGGAGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR GCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACATGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAATATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RLRLKTPELTMRAILFLEYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...TTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATCTGTATACAAGGTGTaGTCTTTCCAATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVSVYKV*SFQCRR
Trigger: CCTTCTACATTGGAAAGAGCACACCTTGTATACAGA...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGGACATCTGTGCAGGTaGCCAACTCGTAACCTCATT +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTGHLCR*PTRNLI
Trigger: AATGAGGTTACGAGTTGGGCACCTGCACAGATGTCC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTTAGTAAATCAGGCTTaGAGGCTCAAAGCTGCAATC +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSLVNQA*RLKAAI
Trigger: GATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp CGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: RLRLKTPELTMRAILFLEILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...TTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACGCACTGCCGTTAGAGTaGCTCCAGCACCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNALPLE*LQHQSG
Trigger: GCCACTCTGGTGCTGGAGCCACTCTAACGGCAGTGC...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp GCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AEDPGAHYEGNPLPRKASLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...GGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GGGGCTTTAGTAAATCAGGCTTGCAGGCTCAAAGCTGCAATCTGCCCACTCTCAAGAGGAACAAGACTCTaGGGACTCCTGGCTATGAAG +
Preference number: 4 (lower is better)
Translates to: GALVNQACRLKAAICPLSRGTRL*GLLAMK
Trigger: CTTCATAGCCAGGAGTCCCCAGAGTCTTGTTCCTCT...TGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCCAGCATACACCTCTGTaGAATCAGCACCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPQHTPL*NQHPRG
Trigger: GCCTCTGGGGTGCTGATTCCACAGAGGTGTATGCTG...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCGGAGTGTGGGGGAGGTaGTGCCCCGTTTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCGVWGR*CPVSLL
Trigger: CAGCAGTGAAACGGGGCACCACCTCCCCCACACTCC...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTGTTGTTGGTTCGAGGTaGGTGAAATGGCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGVVGSR*VKWHFG
Trigger: ACCAAAGTGCCATTTCACCCACCTCGAACCAACAAC...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTGTCAGCTTCTGTTGTTaGTTCGAGGTGGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGVSFCC*FEVGEM
Trigger: CATTTCACCCACCTCGAACCAACAACAGAAGCTGAC...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp CGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTAGGCTGAAGCCTGAGTaGAACATGGGCCTAGCACTT +
Preference number: 4 (lower is better)
Translates to: RHLSASVVGSRWVKWHFGRLKPE*NMGLAL
Trigger: AAGTGCTAGGCCCATGTTCCACTCAGGCTTCAGCCT...ACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCAAGAAATGGATAAATaGGGCTTTAGTAAATCAGGC +
Preference number: 4 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSQEMDK*GFSKSG
Trigger: GCCTGATTTACTAAAGCCCCATTTATCCATTTCTTG...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR CAA 72 bp CAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTaGCTGTCCAAAGTTGGGGGCTGGGGGAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: QANNCVCSFSST*LSKVGGWGSTS
Trigger: AGAAGTGCTCCCCCAGCCCCCAACTTTGGACAGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTTGGGTTTGGGCGGCTTaGGGGAGAACATGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFWVWAA*GRTWCR
Trigger: GCGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCA...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCTGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 4 (lower is better)
Translates to: NFTQCISICAAFPQHGLCCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp ATGGTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: MVSTAFVSFCCWFEVGEMKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...CATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPTDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTCATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRWVKWHFGSEWFQVWLECFTRW*GELNRK
Trigger: CTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCA...CTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCCACACTGGAAATACTaGTGGCCAAGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSPHWKY*WPSPAR
Trigger: GCGTGCTGGGCTTGGCCATCAGTATTTCCAGTGTGG...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCCTAGAAAGGCTTCCTaGAGGTCCACAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETPRKAS*RSTRAA
Trigger: GGCAGCTCTTGTGGACCTTCAGGAAGCCTTTCTAGG...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: TRGRITPCRLAGLENHSLTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...TAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGGGCCACTGCGCTGTTaGCGCAGCATCCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWGPLRC*RSILLS
Trigger: ACTGAGCAGGATGCTGCGGCAACAGCGCAGTGGCCC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATCCTCCAGGGGGCCACTaGGCTGTTGCCGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: ERCLLSSMYTSSAECLRNPPGGH*AVAAAS
Trigger: GGATGCTGCGGCAACAGCGCAGTGGCCCCCTGGAGG...ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCGGTGCCCCGTTTCACTaGTGTAAGAAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLGAPFH*CKKLQL
Trigger: AAGCTGAAGCTTCTTACAGCAGTGAAACGGGGCACC...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGTCAGTCTGGGGCGGTaGCAGGAGGTAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAVSLGR*QEVGPE
Trigger: TTCAGGTCCTACCTCCTGCCACCGCCCCAGACTGAC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTTACGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTTTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 4 (lower is better)
Translates to: LTAEAEDPGAHYEGNPLPFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...AGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AFVSFCCWFEVGEMALWFKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...GAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATCCACCCAGGCTGATCTaGGCCTCGGGAACCCAGCGG +
Preference number: 4 (lower is better)
Translates to: ERCLLSSMYTSSAECLRNPPRLI*ASGTQR
Trigger: CCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGG...ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAGGTAGGAAAAATGGATaGAGACAAAAATGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVGRKNG*RQKCSR
Trigger: TCTGCTACATTTTTGTCTCCATCCATTTTTCCTACC...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCATCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: VSTAFVSFCCWFEVGEMASRWVK*HFGSEW
Trigger: CCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA...TGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTATGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAACATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTTGGCTGTCGGTTTGCTaGGCTGGATCTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVWLSVC*AGSGFG
Trigger: ACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCA...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTACGGCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTTACATCAATGAATTGTaGCCAGAAACTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: LTAEAEDPGAHYEGNPLPYINEL*PETSNS
Trigger: CGAGTTTGAAGTTTCTGGTCACAATTCATTGATGTA...AGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGCCGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTGGGATACAGTCATTTaGGTTAAAAAGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTWDTVI*VKKGMT
Trigger: GGTCATTCCCTTTTTAACTCAAATGACTGTATCCCA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTAAGTTCAAGAGTGGATaGGTGGGCATCTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFKFKSG*VGIFHS
Trigger: TGAGTGAAAGATGCCCACTCATCCACTCTTGAACTT...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp CGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: RHLSASVVGSRWVKWHFGWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...ACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: AFVSFCCWFEVGEMALWFTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...GAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACGGCAGAATAACACCGTaGAGGTTGGCGGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRITPCRLAGLENHSLKYGRITP*RLAGLE
Trigger: TTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGGTGCAGCCACACCACTaGTGTCACCACATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRVQPHH*CHHMSL
Trigger: GAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCAC...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp TCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTCCCCACAAATCGTACTaGCTTGTGTCTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: STAFVSFCCWFEVGEMALPHKSY*LVSVAM
Trigger: CATTGCAACAGACACAAGCCAGTACGATTTGTGGGG...AAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTCAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HHLNKRSYTTAQVSSFLLKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...GAGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCATCCTTTGCTGTAAACTaGAGAGACCAGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPSFAVN*RDQSQT
Trigger: TGTTTGGGACTGGTCTCTCCAGTTTACAGCAAAGGA...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCGAGGCCACTCCCCAGTaGCTTTCAGAGGAACAAGAC +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSEATPQ*LSEEQD
Trigger: GTCTTGTTCCTCTGAAAGCCACTGGGGAGTGGCCTC...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GCGGAAGTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGGAGTTTTGGCATAGATaGCACTCTCCTGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: AEVAQFPQFYVCSRDTWQEFWHR*HSPVYS
Trigger: GCTGTAGACAGGAGAGTGCCATCTATGCCAAAACTC...CTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTACTTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAATCGAGGTGGGTGAAATaGCACTTTGGTTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQSRWVK*HFGSEW
Trigger: CCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAGTCAGCTTCTGTTGTTaGTTCGAGGTGGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQVSFCC*FEVGEM
Trigger: CATTTCACCCACCTCGAACCAACAACAGAAGCTGAC...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACATGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp ATGGTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: MVSTAFVSFCCWFEVGEMGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...CATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKTDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR TCA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATAACTGATATCCTGCCATaGCCCACTCCTTCTGTATCA +
Preference number: 4 (lower is better)
Translates to: AVIQHCQVGFGELKSCRITDILP*PTPSVS
Trigger: TGATACAGAAGGAGTGGGTCATGGCAGGATATCAGT...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGCCCACTCTCAGGTACTaGGACTTTGTGGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: FLKCFVCTDSLQEKMEMRPTLRY*DFVGLR
Trigger: TCTGAGGCCCACAAAGTCTCAGTACCTGAGAGTGGG...CCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGGAATAATGAGCTATTaGAAGGCATACCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLGIMSY*KAYLFS
Trigger: GCTAAAAAGGTATGCCTTGCAATAGCTCATTATTCC...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp ACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: TCPLDFSVPIRVSFKEWSEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...ACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR GCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTGAGTTTTCTGGCTGCTaGCACCACCAGCTCCATTAC +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVEFSGC*HHQLHY
Trigger: GTAATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTC...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp GCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCTCAATCTTCCTCTGCTaGAGCACGTCTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: AFVSFCCWFEVGEMALWFSIFLC*STSLMR
Trigger: CCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGA...GAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TTACCTCCTCCTCCTCCTCCTCCTCCATCTCCTGAGGGAATTCCATTAATTTTGTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LPPPPPPPPSPEGIPLILWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...CAAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGAGGAGGAGGAGGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAAACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSETVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACTTGCAGGCTCAAAGCTaGAATCTGCCCACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNLQAQS*NLPTLR
Trigger: CCTGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAA...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp CCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRHLSASVVGSRWVKWHFISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...AAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GCGGAAGTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AEVAQFPQFYVCSRDTWQISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...CTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTACTTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TCTGTTGGATTAAATTTCAGTTTCTGGTTGGGGCCTAGGACTTTCTGCTTCCTCAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SVGLNFSFWLGPRTFCFLKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...GAGGAAGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAATCCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564787.1
CDS-3UTR CCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp ACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAGAGTGGCTCCAGCACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: TSLMRAIRTRALPLEWLQHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...CTGGAGCCACTCTAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp ATGGTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MVSTAFVSFCCWFEVGEMALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...CATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTTCTCATCACCCAATTaGATGTTTTTGCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSFSSPN*MFLLIA
Trigger: TGCTATAAGCAAAAACATCCAATTGGGTGATGAGAA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGTCCAAAGTTGGGGGCTaGGGGAGCACTTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWSKVGG*GSTSVA
Trigger: AGCGACAGAAGTGCTCCCCCAGCCCCCAACTTTGGA...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCTACAGGTTAGCAACCTaGACTCTCAGGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETYRLAT*TLRLKP
Trigger: AGGCTTCAGCCTGAGAGTCCAGGTTGCTAACCTGTA...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp AGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGTCTTCGGTTCCGAATTaGTCTTATCGTCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: STCPLDFSVPIRVSFKEWSSVPN*SYRQSG
Trigger: CCCAGACTGACGATAAGATCAATTCGGAACCGAAGA...CCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAAAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: RGRITPCRLAGLENHSLKSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CTTTTCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTATACAAGGTGTGGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LFFVRLKDFTEPFCIQGVVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...CACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTGGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: WVKWHFGSEWFQVWLETLAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGTTGCCGCAGCATCCTaGTCAGTACGTCGACTTCAT +
Preference number: 4 (lower is better)
Translates to: PLDFSVPIRVSFKEWSFLVAAAS*SVRRLH
Trigger: ATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAAC...CAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp AAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGAGGAGAAGAGAAGGACATCTGTaGAGGTGCCCAACTCGTAAC +
Preference number: 4 (lower is better)
Translates to: KCFVCTDSLQEKMEMRRRREGHL*RCPTRN
Trigger: GTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCT...TCTCCTCCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp AAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGAGGAGAGGTGCCCCGTTTCACTaGTGTAAGAAGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KCFVCTDSLQEKMEMRRRGAPFH*CKKLQL
Trigger: AAGCTGAAGCTTCTTACAGCAGTGAAACGGGGCACC...TCTCCTCCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGTCAGTCTGGGGCGGTaGCAGGAGGTAGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: ERCLLSSMYTSSAECLRNVSLGR*QEVGPE
Trigger: TTCAGGTCCTACCTCCTGCCACCGCCCCAGACTGAC...ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp ATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGCACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: MCVPETRGRITPCRLAGLHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...CAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTTCTCATCACCCAATTaGATGTTTTTGCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTFSSPN*MFLLIA
Trigger: TGCTATAAGCAAAAACATCCAATTGGGTGATGAGAA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTTTGAGGGCGAGTTTTaGCATAGATGGCACTCTCCT +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLFEGEF*HRWHSP
Trigger: AGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGATTCTATCAAGAACAATaGCAAACTGAACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRFYQEQ*QTEQRQ
Trigger: CTGCCTCTGTTCAGTTTGCCATTGTTCTTGATAGAA...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR CAA 72 bp CAAGAAATGGATAAATGGGGCTTTAGTAAATCAGGCTaGCAGGCTCAAAGCTGCAATCTGCCCACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QEMDKWGFSKSG*QAQSCNLPTLR
Trigger: CCTGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCCATTTATCCATTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
3UTR CAA 72 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTaGGAAAACCATTCTCTAAAATACTGCTCCGTATCA +
Preference number: 4 (lower is better)
Translates to: TRGRITPCRLAG*ENHSLKYCSVS
Trigger: TGATACGGAGCAGTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTCTTCGGTTCCGAATTaGTCTTATCGTCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSSSVPN*SYRQSG
Trigger: CCCAGACTGACGATAAGATCAATTCGGAACCGAAGA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCTGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp GCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: AFVSFCCWFEVGEMALWFSSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...GAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAATCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAAGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSEGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCGGATCCAGCATCACTTaGACAAGAGAAGCTACACAA +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLGSSIT*TREATQ
Trigger: TTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCC...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGCATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: CWFEVGEMALWFRMVSSLHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...CAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTCATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTGAAGGTGCCAAACAGTaGGATCCGGGTGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLEGAKQ*DPGAVI
Trigger: TATGACAGCACCCGGATCTCACTGTTTGGCACCTTC...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp AATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGATTTCAAAACACAGTaGTCTAAGGTTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NLPLLQHVFDEGHSHKSTDFKTQ*SKVPKK
Trigger: CTTCTTTGGAACCTTAGATCACTGTGTTTTGAAATC...AGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCAAAAAGGGAGAATTGTaGTTACACTGTCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLKKGEL*LHCQWQ
Trigger: CTGCCATTGACAGTGTAATCACAATTCTCCCTTTTT...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCCTTGCTCATCCCACTTaGACTCAAGTCATCAATTTT +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLLAHPT*TQVINF
Trigger: AAAATTGATGACTTGAGTTCAAGTGGGATGAGCAAG...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCAAATCCTCTACATCAATaGATTGTGACCAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: VSTAFVSFCCWFEVGEMANPLHQ*IVTRNF
Trigger: GAAGTTTCTGGTCACAATTCATTGATGTAGAGGATT...TGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCAGGAATAATGAGCTATTaGAAGGCATACCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: VSTAFVSFCCWFEVGEMAGIMSY*KAYLFS
Trigger: GCTAAAAAGGTATGCCTTGCAATAGCTCATTATTCC...TGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAATGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: SVVGSRWVKWHFGSEWFQWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...TTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp ACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TPELTMRAILFLERLPEGVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...ACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATGAGGAGGAGAAAGGGTGCGATCCTTTaGTGTAAACTGGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: KCFVCTDSLQEKMEMRRRKGAIL*CKLERP
Trigger: TGGTCTCTCCAGTTTACAGCAAAGGATCGCACCCTT...TCTCCTCCTCATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTGGCAGAATAACACCGTaGAGGTTGGCGGGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLGRITP*RLAGLE
Trigger: TTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATAACTTTCCTGTTGTCTaGTGCCTGGGGCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNNFPVV*CLGLLM
Trigger: CATTAGCAGCCCCAGGCAGCAGACAACAGGAAAGTT...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCGGACATCTGTGCAGGTaGCCAACTCGTAACCTCATT +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCGHLCR*PTRNLI
Trigger: AATGAGGTTACGAGTTGGGCACCTGCACAGATGTCC...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAAGCAAACAACTGTGTCTaGTCATTCTCCTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: RGRITPCRLAGLENHSLKANNCV*SFSSTL
Trigger: CAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGC...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp AAGGTGTCATCCAGAAGTTCAAGAGTGGATGAGTGGGCATCTTTCACTCACAAACCCCACAAATCGTACTaGCTTGTGTCTGTTGCAATG +
Preference number: 4 (lower is better)
Translates to: KVSSRSSRVDEWASFTHKPHKSY*LVSVAM
Trigger: CATTGCAACAGACACAAGCCAGTACGATTTGTGGGG...TTTGTGAGTGAAAGATGCCCACTCATCCACTCTTGAACTTCTGGATGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCTTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CCA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKEVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CCA 90 bp AGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFHSFMCVPETRGRITPCVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...GCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGGCATTACAAATCCTCTaGTCAATCTTCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRWVKWHFGSEWFQVWLEALQIL*SIFLCC
Trigger: GCAGCAGAGGAAGATTGACCAGAGGATTTGTAATGC...CTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCATCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPSDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCATCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VSTAFVSFCCWFEVGEMASDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...TGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp AGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SFHSFMCVPETRGRITPCLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...GCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGACTTGGAAGTAATTCTTaGTCACTGATGATTCCATTC +
Preference number: 4 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRLGSNS*SLMIPF
Trigger: GAATGGAATCATCAGTGACCAAGAATTACTTCCAAG...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGTTCCAGAGACACGTaGCAGAATAACACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCCSRDT*QNNTVQ
Trigger: CTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTTTGAGGGCGAGTTTTaGCATAGATGGCACTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSFEGEF*HRWHSP
Trigger: AGGAGAGTGCCATCTATGCCAAAACTCGCCCTCAAA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTGGCAGGATACGCTGTaGTGTTATAAGGAGATTGGG +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSWQDTL*CYKEIG
Trigger: CCCAATCTCCTTATAACACCACAGCGTATCCTGCCA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAGGTGAAATGGCACTTTaGTTCAGAATGGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQGEMAL*FRMVSS
Trigger: ACTTGAAACCATTCTGAACCAAAGTGCCATTTCACC...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCGCATTCCTCTTAGTGTaGAGCTGTAGCTTTTCTATA +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLAFLLV*SCSFSI
Trigger: TATAGAAAAGCTACAGCTCCACACTAAGAGGAATGC...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATCAAGAGTGGATGAGTaGGCATCTTTCACTCACAAA +
Preference number: 4 (lower is better)
Translates to: RGRITPCRLAGLENHSLKSRVDE*ASFTHK
Trigger: TTTGTGAGTGAAAGATGCCCACTCATCCACTCTTGA...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR TCA 90 bp TTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: FCCWFEVGEMALWFRMVSSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...TGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKESSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp CGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: RHLSASVVGSRWVKWHFGSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...ACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAATACATCAATGAATTGTaGCCAGAAACTTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQYINEL*PETSNS
Trigger: CGAGTTTGAAGTTTCTGGTCACAATTCATTGATGTA...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGGGCCTAGGACTTTCTaGTTCCTCTTGTGGTCGTTT +
Preference number: 4 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLGPRTF*FLLWSF
Trigger: AAACGACCACAAGAGGAAGCAGAAAGTCCTAGGCCC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATGTGGAGTTTTCTGGCTaGTGCCACCACCAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYVEFSG*CHHQLH
Trigger: ATGGAGCTGGTGGTGGCAGCAGCCAGAAAACTCCAC...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: CSRDTWQNNTVQVGGFGKISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSEYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAATCTGTATACAAGGTGTaGTCTTTCCAATGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKSVYKV*SFQCRR
Trigger: CCTTCTACATTGGAAAGAGCACACCTTGTATACAGA...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCATGGTGTTCCTAAAATaGTTCGTCTGCACAGATTCC +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLMVFLK*FVCTDS
Trigger: GGAATCTGTGCAGACGAAGCATTTTAGGAACACCAT...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGAACTTTCCTGTTGTCTaGTGCCTGGGGCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWNFPVV*CLGLLM
Trigger: CATTAGCAGCCCCAGGCAGCAGACAACAGGAAAGTT...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCCGTATCACTGTTCTGGCTGTCGGTTTGCTGAGCTGGATCTGGCTTTGGTTTTCCATTAATTTTGTTTaGTGCCTGCAAAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: LRITVLAVGLLSWIWLWFSINFV*CLQKGL
Trigger: AAGTCCTTTTTGCAGGCAGCAAACAAAATTAATGGA...AAACCAAAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAACAGTGATACGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR GCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAAACAACTTTTTATCCGTaGTTTGCTTCACTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSETTFYP*FASLAG
Trigger: ACCAGCGAGTGAAGCAAAGCACGGATAAAAAGTTGT...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566981.1
CDS-3UTR CCA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAATTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 4 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CCA 90 bp TCTGTTGGATTAAATTTCAGTTTCTGGTTGGGGCCTAGGACTTTCTGCTTCCTCATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVGLNFSFWLGPRTFCFLISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...GAGGAAGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAATCCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564787.1
CDS-3UTR CCA 90 bp TCTTGTAGGACTACAGAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTAAGAGTGGAGTTTTCTaGCTGCTGCCACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SCRTTERCLLSSMYTSSAKSGVF*LLPPPA
Trigger: AGCTGGTGGTGGCAGCAGCCAGAAAACTCCACTCTT...AGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp AGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: STCPLDFSVPIRVSFKEWILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...CCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp CGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTCACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: RHLSASVVGSRWVKWHFGHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...ACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp TTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCACTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: FCCWFEVGEMALWFRMVSLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...TGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACTCCTTTGCTGTAAACTaGAGAGACCAGTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNSFAVN*RDQSQT
Trigger: TGTTTGGGACTGGTCTCTCCAGTTTACAGCAAAGGA...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGGCTGCTGCCACCCTTGGAAGTAATTCTTaGTCACTGATGATTCCATTC +
Preference number: 4 (lower is better)
Translates to: SVPIRVSFKEWSFLAAATLGSNS*SLMIPF
Trigger: GAATGGAATCATCAGTGACCAAGAATTACTTCCAAG...GGTGGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGAGAGGAACAAGACTCTaGGGACTCCTGGCTATGAAG +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWRGTRL*GLLAMK
Trigger: CTTCATAGCCAGGAGTCCCCAGAGTCTTGTTCCTCT...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCTCTGACTGCAGTGTGTaGAAATTTCAGGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SFHSFMCVPETRGRITPCSDCSV*KFQAPF
Trigger: AAAAGGAGCCTGAAATTTCCACACACTGCAGTCAGA...GCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
3UTR CAA 72 bp AGTTTCTGGTTGGGGCCTAGGACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACAATTTGCTCAATACAT +
Preference number: 4 (lower is better)
Translates to: SFWLGPRTFCFL*WSFTVTICSIH
Trigger: ATGTATTGAGCAAATTGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGTCCTAGGCCCCAACCAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564787.1
CDS-3UTR TCA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTTCTTCGGTTCCGAATTaGTCTTATCGTCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFSSVPN*SYRQSG
Trigger: CCCAGACTGACGATAAGATCAATTCGGAACCGAAGA...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp TTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGATGTGGTCGTTTACTGTaGCAATTTGCTCAATACATG +
Preference number: 4 (lower is better)
Translates to: FVSFCCWFEVGEMALWFRCGRLL*QFAQYM
Trigger: CATGTATTGAGCAAATTGTCACAGTAAACGACCACA...TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR TCA 90 bp CCTAAAATAGGGATCCAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: PKIGIQHHLNKRSYTTAQSTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...TTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCCCTATTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp ACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: TCPLDFSVPIRVSFKEWSSSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...ACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR TCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTCTTGCTCATCCCACTTaGACTCAAGTCATCAATTTT +
Preference number: 4 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPLAHPT*TQVINF
Trigger: AAAATTGATGACTTGAGTTCAAGTGGGATGAGCAAG...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp TGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTGCTGGCTTGTGTCTGTTaGAATGCATTTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: WVKWHFGSEWFQVWLETLLACVC*NAFSHK
Trigger: TTTGTGAGAAAATGCATTGCAACAGACACAAGCCAG...CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR GCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAATCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: ELTMRAILFLERLPEGPQISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTTATTGTTCTAACAGCTaGCAGGTGGCATCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVYCSNS*QVASKN
Trigger: ATTCTTGGATGCCACCTGGCAGCTGTTAGAACAATA...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTCCAGCACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTCATTCTCTAAAATACTaGTCCGTATCACTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LQHQSGILLPTKEWEKIFHSLKY*SVSLFW
Trigger: CCAGAACAGTGATACGGAGCAGTATTTTAGAGAATG...AAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGAGAAATTTCACCCAGTaGATCAGCATCTGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWRNFTQ*ISICAA
Trigger: TGCCGCACAGATGCTGATGCACTGGGTGAAATTTCT...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTACGACAATTTCTCCTaGCAAAAGGACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLYDNFS*QKDWLQ
Trigger: CTGGAGCCAGTCCTTTTGCCAGGAGAAATTGTCGTA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATATTTCAGTTTCTGGTTaGGGCCTAGGACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNISVSG*GLGLSA
Trigger: AGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAAT...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp GCTGTCATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATACACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: AVIQHCQVGFGELKSCRIHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...TATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp CCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGCTAACAGCTGCCAGGTaGCATCCAAGAATAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PLDFSVPIRVSFKEWSFLLTAAR*HPRIAK
Trigger: TTTTGCTATTCTTGGATGCCACCTGGCAGCTGTTAG...CAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCCTTGGAAGTAATTCTTaGTCACTGATGATTCCATTC +
Preference number: 4 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPLGSNS*SLMIPF
Trigger: GAATGGAATCATCAGTGACCAAGAATTACTTCCAAG...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp AGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTCACTTTGGTTCAGAATaGTTTCAAGTTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SFCCWFEVGEMALWFRMVHFGSE*FQVWLE
Trigger: CTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTG...AACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp TGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTGCACTTTGGTTCAGAATaGTTTCAAGTTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: WVKWHFGSEWFQVWLETLHFGSE*FQVWLE
Trigger: CTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTG...CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CAA 72 bp CTTCCTTCCTCCTCTTGTAGGACTACAGAGAGATGTTaGCTTTCTAGCATGTATACAAGTTCTGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: LPSSSCRTTERC*LSSMYTSSAEC
Trigger: GCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGAGGAGGAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTCCTCCTCCATCTCCTaGGGGAATTCCATTAATTTT +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCSSSIS*GNSINF
Trigger: AAAATTAATGGAATTCCCTCAGGAGATGGAGGAGGA...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp GAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATAAGCACCTGTCCTCTTaGTTTCTCTGTCCCAATCCG +
Preference number: 4 (lower is better)
Translates to: ERCLLSSMYTSSAECLRNKHLSS*FLCPNP
Trigger: CGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTT...ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTGTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: WVKWHFGSEWFQVWLETLFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR TCA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKEFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR TCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTCATCTGTCTAGAAACTaGTATCCTGCCATGACCCAC +
Preference number: 4 (lower is better)
Translates to: CLLSSMYTSSAECLRNALHLSRN*YPAMTH
Trigger: GTGGGTCATGGCAGGATATCAGTTTCTAGACAGATG...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTAAAAAGGGAGAATTGTaGTTACACTGTCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVKKGEL*LHCQWQ
Trigger: CTGCCATTGACAGTGTAATCACAATTCTCCCTTTTT...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTTGGTCAATCTTCCTCTaGTGCAGCACGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: CLLSSMYTSSAECLRNALWSIFL*CSTSLM
Trigger: CATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATACAGTGAGATCCGGGTaGTGTCATACAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYTVRSG*CHTTLP
Trigger: TGGCAGTGTTGTATGACAGCACCCGGATCTCACTGT...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCGCAAACAACTGTGTCTaGTCATTCTCCTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCANNCV*SFSSTL
Trigger: CAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGC...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TCTGTTGGATTAAATTTCAGTTTCTGGTTGGGGCCTAGGACTTTCTGCTTCCTCTTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 4 (lower is better)
Translates to: SVGLNFSFWLGPRTFCFLFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...GAGGAAGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAATCCAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564787.1
CDS-3UTR CCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACTTCTGCTTCCTCTTGTaGTCGTTTACTGTGACAATT +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNFCFLL*SFTVTI
Trigger: AATTGTCACAGTAAACGACCACAAGAGGAAGCAGAA...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCATTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: FCCWFEVGEMALWFRMVSLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...TGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CCA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATATTCTGGAAGGCAAGTaGATATCATGTAACCCTCGT +
Preference number: 4 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNILEGK*ISCNPR
Trigger: ACGAGGGTTACATGATATCCACTTGCCTTCCAGAAT...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLSDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp GCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCCTTCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: ASLEQEKLHNSSSLFLPPSDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...AGGAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTTGGCAGGATACGCTGTaGTGTTATAAGGAGATTGGG +
Preference number: 4 (lower is better)
Translates to: CLLSSMYTSSAECLRNALWQDTL*CYKEIG
Trigger: CCCAATCTCCTTATAACACCACAGCGTATCCTGCCA...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CCA 90 bp TGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGGTGAAATGGCACTTTaGTTCAGAATGGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CWFEVGEMALWFRMVSSLGEMAL*FRMVSS
Trigger: ACTTGAAACCATTCTGAACCAAAGTGCCATTTCACC...CAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
3UTR CAA 72 bp ATAATTAACTCTGTTGGATTAAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGCTTCCTCTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: IINSVGLNFSFW*GPRTFCFLLWS
Trigger: CGACCACAAGAGGAAGCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAATCCAACAGAGTTAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564787.1
CDS-3UTR TCA 90 bp TCTTGTAGGACTACAGAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: SCRTTERCLLSSMYTSSASTFGT*FIKAKS
Trigger: AGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCT...AGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp TGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGAATCCTCTACATCAATaGATTGTGACCAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: CWFEVGEMALWFRMVSSLNPLHQ*IVTRNF
Trigger: GAAGTTTCTGGTCACAATTCATTGATGTAGAGGATT...CAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TCTTGGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAAGTGGATCTGGCTTGTGTCTGTTaGAATGCATTTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: SWSAKELGTTMYSGRQVDLACVC*NAFSHK
Trigger: TTTGTGAGAAAATGCATTGCAACAGACACAAGCCAG...ATCCACTTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp TTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: LSASVVGSRWVKWHFGSESLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...TTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CTCCAGCACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: LQHQSGILLPTKEWEKIFSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...AAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGTGCTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATCTCTTTAGATGGTTaGATCTGTCTAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: FVSFCCWFEVGEMALWFRISLDG*ICLETD
Trigger: ATCAGTTTCTAGACAGATGCAACCATCTAAAGAGAT...TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATGCTGTCATACAACACTaGCAGGTAGGTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYAVIQH*QVGFGE
Trigger: TTCTCCGAAACCTACCTGGCAGTGTTGTATGACAGC...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCCATTCTCTAAAATACTaGTCCGTATCACTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCHSLKY*SVSLFW
Trigger: CCAGAACAGTGATACGGAGCAGTATTTTAGAGAATG...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCATACTTCCTAAAACCTaGTGGAGGTTTTATCAGATG +
Preference number: 4 (lower is better)
Translates to: LRSILEISPSASASVRHSILPKT*WRFYQM
Trigger: CATCTGATAAAACCTCCAGCAGGTTTTAGGAAGTAT...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACATACTTCCTAAAACCTaGTGGAGGTTTTATCAGATG +
Preference number: 4 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNILPKT*WRFYQM
Trigger: CATCTGATAAAACCTCCAGCAGGTTTTAGGAAGTAT...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR GCA 90 bp CAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAGTCTCTTCCTTCCTCTTAATGAATTCTGACTaGAGTGTGTGGAAATTTCAG +
Preference number: 4 (lower is better)
Translates to: QHHLNKRSYTTAQVSSFLLMNSD*SVWKFQ
Trigger: CTGAAATTTCCACACACTGCAGTCAGAATTCATTAA...GAGGAAGGAAGAGACTTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp TCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAACACTACAATGTATTCTaGAAGGCAAGTGGATATCAT +
Preference number: 4 (lower is better)
Translates to: SVVGSRWVKWHFGSEWFQHYNVF*KASGYH
Trigger: ATGATATCCACTTGCCTTCCAGAATACATTGTAGTG...TTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CCA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACTTCTCATCACCCAATTaGATGTTTTTGCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: GRITPCRLAGLENHSLKYFSSPN*MFLLIA
Trigger: TGCTATAAGCAAAAACATCCAATTGGGTGATGAGAA...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTCATTCTCTAAAATACTaGTCCGTATCACTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLHSLKY*SVSLFW
Trigger: CCAGAACAGTGATACGGAGCAGTATTTTAGAGAATG...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATCTAAAATGCTTCGTCTaGACAGATTCCCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYLKCFV*TDSLQE
Trigger: CTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAG...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGATAACACATCTTCTTaGTCATCCCACTTGAACTCA +
Preference number: 4 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLDNTSS*SSHLNS
Trigger: TGAGTTCAAGTGGGATGAGCAAGAAGATGTGTTATC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CCA 90 bp CTTTTCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTATACAAGGTGTGTTAAATTTCAGTTTCTaGTTGGGGCCTAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: LFFVRLKDFTEPFCIQGVLNFSF*LGPRTF
Trigger: GAAAGTCCTAGGCCCCAACCAGAAACTGAAATTTAA...CACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATGTAAGTTTCAAAGAGTaGAGTTTTCTGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYVSFKE*SFLAAA
Trigger: GGCAGCAGCCAGAAAACTCCACTCTTTGAAACTTAC...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CCA 90 bp AGAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTCTGATCTCTTTAGATaGTTGCATCTGTCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: REIQIKQTTVSAHSPQLCSDLFR*LHLSRN
Trigger: GTTTCTAGACAGATGCAACCATCTAAAGAGATCAGA...GCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
3UTR CAA 72 bp AGAGGTGTTTGGTTACGTGTGAGCCAACATCACGTTTaGTTAGCTGTGATTTACCTTTGTCCGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RGVWLRVSQHHV*LAVIYLCPFKR
Trigger: TCTTTTAAACGGACAAAGGTAAATCACAGCTAACAAAACGTGATGTTGGCTCACACGTAACCAAACACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR TCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATGCTGCCTGTACTTCTTaGATATTAGGCAAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYAACTS*ILGKVL
Trigger: TAAGACCTTGCCTAATATTCAAGAAGTACAGGCAGC...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGATTTCAAAACACAGTaGTCTAAGGTTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWDFKTQ*SKVPKK
Trigger: CTTCTTTGGAACCTTAGATCACTGTGTTTTGAAATC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR GCA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGGGAATAATGAGCTATTaGAAGGCATACCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWGIMSY*KAYLFS
Trigger: GCTAAAAAGGTATGCCTTGCAATAGCTCATTATTCC...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435680.6
CDS-3UTR GCA 90 bp GGTGTTCCTAAAATGCTTCGTCTGCACAGATTCCCTACAGGAGAAAATGGAAATTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: GVPKMLRLHRFPTGENGNSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...ATTTCCATTTTCTCCTGTAGGGAATCTGTGCAGACGAAGCATTTTAGGAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp GAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATCTGGCTTGTGTCTGTTaGAATGCATTTTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: ERCLLSSMYTSSAECLRNLACVC*NAFSHK
Trigger: TTTGTGAGAAAATGCATTGCAACAGACACAAGCCAG...ATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR GCA 90 bp ACCAGAGTGGCATCCTTCTCCCAACAAAAGAATGGGAAAAGATCTTTAGATCTTTCATTAACGCATAGCTaGTTCAGTTTTACAAATGCT +
Preference number: 4 (lower is better)
Translates to: TRVASFSQQKNGKRSLDLSLTHS*FSFTNA
Trigger: AGCATTTGTAAAACTGAAGCAGCTATGCGTTAATGA...AAGATCTAAAGATCTTTTCCCATTCTTTTGTTGGGAGAAGGATGCCACTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTCACTTCTCTGTGGGTaGCTTTTAGTTATTGCATTA +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYSLLCG*LLVIAL
Trigger: TAATGCAATAACTAAAAGTCACCCACAGAGAAGTGA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR TCA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTTCTGTATCAGACTCTaGAATCCAGTAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LSSMYTSSAECLRNALTYFCIRL*NPVIVL
Trigger: TAGGACAATTACTGGATTTCAGAGTCTGATACAGAA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR GCA 90 bp TCTTGTAGGACTACAGAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGTGACTTTTAGTTATTaGATTACAAATCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SCRTTERCLLSSMYTSSAVTFSY*ITNPLV
Trigger: GACCAGAGGATTTGTAATGCAATAACTAAAAGTCAC...AGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS CCA 90 bp TCAGGCAGCCGCGCTGCTGTGGGCAGGGAGACGCGCGCAGCCTCCTaGGGTCCTCCAGTTCCCGGGGGTCGGCCTGGAGGCTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: SGSRAAVGRETRAAS*GPPVPGGRPGGSTE
Trigger: TTCCGTGGAGCCTCCAGGCCGACCCCCGGGAACTGGAGGACCCCAGGAGGCTGCGCGCGTCTCCCTGCCCACAGCAGCGCGGCTGCCTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS CCA 90 bp GAAGGCGCATTTCGCGGCGCCGGGAATCAGGCAGCCGCGCTGCTGTaGGCAGGGAGACGCGCGCAGCCTCCTGGGGTCCTCCAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: EGAFRGAGNQAAALL*AGRRAQPPGVLQFP
Trigger: CGGGAACTGGAGGACCCCAGGAGGCTGCGCGCGTCTCCCTGCCCACAGCAGCGCGGCTGCCTGATTCCCGGCGCCGCGAAATGCGCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CGCTGTTGCCGCAGCATCCTGCTCAGTACGTCGACTTCATCAGCCAGGAGGGAGGTGGGTTTGGGCGGCTaGAGGGAGAACATGGTGCCG +
Preference number: 5 (lower is better)
Translates to: RCCRSILLSTSTSSARREVGLGG*RENMVP
Trigger: CGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCAC...CTCCCTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAGTGGGTTTGGGCGGCTaGAGGGAGAACATGGTGCCG +
Preference number: 5 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVVGLGG*RENMVP
Trigger: CGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCAC...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGTTCCTAACTTTCCTGTaGTCTGCTGCCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: APCAATPLLSPHVPLTAEFLTFL*SAAWGC
Trigger: GCAGCCCCAGGCAGCAGACAACAGGAAAGTTAGGAA...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGTCATTCTCCTCAACTTaGCTGTCCAAAGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQSFSST*LSKVGG
Trigger: GCCCCCAACTTTGGACAGCAAAGTTGAGGAGAATGA...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCTCTGCTGGCGGGCAGCAGGGGTGCTGAGCTCTCTCTAGTGCGCCCTGTGCAGAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: ALLAGSRGAELSLVRPVQNFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...CTGCACAGGGCGCACTAGAGAGAGCTCAGCACCCCTGCTGCCCGCCAGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTATCTTCGGTTCCGAATaGATCTTATCGTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVIFGSE*ILSSVW
Trigger: CCAGACTGACGATAAGATCAATTCGGAACCGAAGAT...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTACCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS TCA 90 bp GCCACAGCCACAGGGTTGCTTACCGTGCTTTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAGGTGCCAAACAGTGAGATCCGGGTG +
Preference number: 5 (lower is better)
Translates to: ATATGLLTVLCFTRW*GELNRKVPNSEIRV
Trigger: CACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTAAGCAACCCTGTGGCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565728.5
CDS-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCAGCAAATTCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSSKFRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCT...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAGTTCTGGCTGTCGGTTaGCTGAGCTGGATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVVLAVG*LSWIWL
Trigger: AAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAAC...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGTGCAGGTTGGCGGGTTaGGAAAACCATTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: APCAATPLLSPHVPLTAECRLAG*ENHSLK
Trigger: TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCA...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp AACTCAGGTTTCCCGCTCCCTAGGTCACACTGCCTAGCCCAGGGCCTTACGGCTAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: NSGFPLPRSHCLAQGLTANFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...AGCCGTAAGGCCCTGGGCTAGGCAGTGTGACCTAGGGAGCGGGAAACCTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: AEAEDPGAHYEGNPLPRKCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...CTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp TCCTGCTCTGGCCCAGCTCCCCATAGCAGGCCTCCAGGGGGCCACTGCGCTGTTACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: SCSGPAPHSRPPGGHCAVTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...AACAGCGCAGTGGCCCCCTGGAGGCCTGCTATGGGGAGCTGGGCCAGAGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp AATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTCAGCACGGGCTCTGCAGCAAATTCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: NFTQCISICAAFPQHGLCSKFRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCT...GCAGAGCCCGTGCTGAGGGAATGCCGCACAGATGCTGATGCACTGGGTGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS TCA 90 bp CAGGGTTGCTTACCGTGCTTTGCTTCACTCGCTGGTGAGGGGAGTTaGACAGGAAGGTGCCAAACAGTGAGATCCGGGTGCTGTCATACA +
Preference number: 5 (lower is better)
Translates to: QGCLPCFASLAGEGS*TGRCQTVRSGCCHT
Trigger: TGTATGACAGCACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTAAGCAACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565728.5
CDS-3UTR CAA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAGTTCTGGCTGTCGGTTaGCTGAGCTGGATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTVLAVG*LSWIWL
Trigger: AAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAAC...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCATAACACCGTGCAGGTaGGCGGGTTTGGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSITPCR*AGLENH
Trigger: ATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTAT...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCTCATTCTCCTCAACTTaGCTGTCCAAAGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSSFSST*LSKVGG
Trigger: GCCCCCAACTTTGGACAGCAAAGTTGAGGAGAATGA...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp AGGAGGAGAGAAACTCCGGTGTCCCCGAGGTGTCGGTGTGGTGAGGGCCGCTGGAGCAAGCAGATTTTGTaGACAAATGTGAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: RRRETPVSPRCRCGEGRWSKQIL*TNVNSF
Trigger: AAAGCTGTTCACATTTGTCAACAAAATCTGCTTGCT...CCAGCGGCCCTCACCACACCGACACCTCGGGGACACCGGAGTTTCTCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACGTGGGTTTGGGCGGCTaGAGGGAGAACATGGTGCCG +
Preference number: 5 (lower is better)
Translates to: GRITPCRLAGLENHSLKYVGLGG*RENMVP
Trigger: CGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCAC...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGATGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CGCTGTTGCCGCAGCATCCTGCTCAGTACGTCGACTTCATCAGCCAGGAGGGAGTGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RCCRSILLSTSTSSARRECCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...CTCCCTCCTGGCTGATGAAGTCGACGTACTGAGCAGGATGCTGCGGCAACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCACCCAATTGGATGTTTTaGCTTATAGCAAATTCCGTG +
Preference number: 5 (lower is better)
Translates to: CDGATQADLGLGNPAEVAPNWMF*LIANSV
Trigger: CACGGAATTTGCTATAAGCAAAAACATCCAATTGGG...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTGATGGAGCCACCCAGGCTGATCTGGGCCTCGGGAACCCAGCGGAAGTAGCACTTCTCATCACCCAATaGGATGTTTTTGCTTATAGC +
Preference number: 5 (lower is better)
Translates to: CDGATQADLGLGNPAEVALLITQ*DVFAYS
Trigger: GCTATAAGCAAAAACATCCAATTGGGTGATGAGAAG...TGCTACTTCCGCTGGGTTCCCGAGGCCCAGATCAGCCTGGGTGGCTCCATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTTAATAACACCGTGCAGGTaGGCGGGTTTGGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: LCCSTSLMRAIRTRALPLITPCR*AGLENH
Trigger: ATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTAT...TAACGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTAGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: CAATPLLSPHVPLTAEVVDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...TACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCAAGCCTTGTTTGTTTTaGAGGGCGAGTTTTGGCATA +
Preference number: 5 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSKPCLF*RASFGI
Trigger: TATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTT...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPASQQA*FVFEGE
Trigger: CTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGC...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCCTCTGACGGCAGAGAGCAAGCAGATTTTGTaGACAAATGTGAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: APCAATPLLSPHVPLTAESKQIL*TNVNSF
Trigger: AAAGCTGTTCACATTTGTCAACAAAATCTGCTTGCT...CTCTGCCGTCAGAGGGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGCTTTTTATCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AEAEDPGAHYEGNPLPRKLFIRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGATAAAAAG...CTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566981.1
CDS-3UTR CAA 90 bp ACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTGTGGGTTTGGGCGGCTaGAGGGAGAACATGGTGCCG +
Preference number: 5 (lower is better)
Translates to: TCPLDFSVPIRVSFKEWSVGLGG*RENMVP
Trigger: CGGCACCATGTTCTCCCTCAAGCCGCCCAAACCCAC...ACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS TCA 90 bp GTACAACTTTTTATCCTACTGACCGTGCTTTGCTTCACTCGCTGGTaGGGGGAGTTGAACAGGAAGGTGCCAAACAGTGAGATCCGGGTG +
Preference number: 5 (lower is better)
Translates to: VQLFILLTVLCFTRW*GELNRKVPNSEIRV
Trigger: CACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTCAGTAGGATAAAAAGTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTNFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GGGGCTTTAGTAAATCAGGCTTGCAGGCTCAAAGCTGCAATCTGCCCACTCTCAGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: GALVNQACRLKAAICPLSEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...TGAGAGTGGGCAGATTGCAGCTTTGAGCCTGCAAGCCTGATTTACTAAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp TTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAGCACTGCCGTGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: FLCCSTSLMRAIRTRALPCCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...CGGCAGTGCTCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGCTCTCTCTAGTGCGCCCTGTGCAGCCACACCACTGCTGTCACCACATGTCCGCCCCACTTAAAAATTaGCTTAATGGTGTTCCTAAA +
Preference number: 5 (lower is better)
Translates to: ELSLVRPVQPHHCCHHMSAPLKN*LNGVPK
Trigger: TTTAGGAACACCATTAAGCAAATTTTTAAGTGGGGC...GGACATGTGGTGACAGCAGTGGTGTGGCTGCACAGGGCGCACTAGAGAGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCCTGCCTACTGACCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WVKWHFGSEWFQVWLETLPTDRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGTCAGTAGG...CAGGGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp GCTGAGGCTGAAGACCCCGGAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGGTTTCAAGTTTGGCTaGAGACCCTGCTTAGTCATA +
Preference number: 5 (lower is better)
Translates to: AEAEDPGAHYEGNPLPRKGFKFG*RPCLVI
Trigger: TATGACTAAGCAGGGTCTCAAGCCAAACTTGAAACC...CTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTCCGGGGTCTTCAGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS TCA 90 bp ACAACTTTTTATCCGTGCTTTGCTTCACTCGCTGGTGAGGGGAGTTaGACAGGAAGGTGCCAAACAGTGAGATCCGGGTGCTGTCATACA +
Preference number: 5 (lower is better)
Translates to: TTFYPCFASLAGEGS*TGRCQTVRSGCCHT
Trigger: TGTATGACAGCACCCGGATCTCACTGTTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGATAAAAAGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566981.1
CDS-3UTR CAA 90 bp TGTAGCAGACAACATGAACAGTTTGATCACGGTTACAAGAGCCAGACCTGTAATGACCTGAAGGTGGGTTaGGGCGGCTTGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: CSRQHEQFDHGYKSQTCNDLKVG*GGLREN
Trigger: GTTCTCCCTCAAGCCGCCCAAACCCACCTTCAGGTC...ATTACAGGTCTGGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTCTGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAGTAGCTGGAGGTCTGTaGGCTGGGAATAATGAGCTA +
Preference number: 5 (lower is better)
Translates to: ELTMRAILFLERLPEGPQVAGGL*AGNNEL
Trigger: TAGCTCATTATTCCCAGCCAACAGACCTCCAGCTAC...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp ACTGCTGTCACCACATGTCCCTCTGACGGCAGAGGTGGTATAAGCAGCTTCACCTGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TAVTTCPSDGRGGISSFTCCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...GGTGAAGCTGCTTATACCACCTCTGCCGTCAGAGGGACATGTGGTGACAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCCCCAATTGGATGTTTTaGCTTATAGCAAATTCCGTG +
Preference number: 5 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSPNWMF*LIANSV
Trigger: CACGGAATTTGCTATAAGCAAAAACATCCAATTGGG...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp ATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGTGCAGGTTGGCGGGTTaGGAAAACCATTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: MCVPETRGRITPCRLAGLCRLAG*ENHSLK
Trigger: TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCA...CAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCCTTTGCTGTCCAAAGTaGGGGGCTGGGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: LRSILEISPSASASVRHSLCCPK*GAGGAL
Trigger: AAGTGCTCCCCCAGCCCCCAACTTTGGACAGCAAAG...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CTCTGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAACAAATCGTACTGGCTaGTGTCTGTTGCAATGCATT +
Preference number: 5 (lower is better)
Translates to: LWSIFLCCSTSLMRAIRTTNRTG*CLLQCI
Trigger: AATGCATTGCAACAGACACAAGCCAGTACGATTTGT...TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CCCGGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: PGSTCPLDFSVPIRVSFKEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...TTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp ATGAGGAGTGTGGGGGAGGTGGTGCCCCGTTTCACTGCTGTAAGAAGCTTCAGCACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: MRSVGEVVPRFTAVRSFSTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...GCTGAAGCTTCTTACAGCAGTGAAACGGGGCACCACCTCCCCCACACTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CATACAACACTGCCAGGTAGGTTTCGGAGAACTCAAAAGCTGCAGGATATTGTTGCCTCCCAGCAAGCCTaGTTTGTTTTTGAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: HTTLPGRFRRTQKLQDIVASQQA*FVFEGE
Trigger: CTCGCCCTCAAAAACAAACAAGGCTTGCTGGGAGGC...AACAATATCCTGCAGCTTTTGAGTTCTCCGAAACCTACCTGGCAGTGTTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp TCTTGGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAAGTGGATCTTTGCTGTCCAAAGTaGGGGGCTGGGGGAGCACTT +
Preference number: 5 (lower is better)
Translates to: SWSAKELGTTMYSGRQVDLCCPK*GAGGAL
Trigger: AAGTGCTCCCCCAGCCCCCAACTTTGGACAGCAAAG...ATCCACTTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp CTGTGCAGGTGCCCAACTCGTAACCTCATTAGTTATTTCCAGGGGGAAGTGCCAGTGGTAGGTAGGCTCTaGTCACACAGTTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: LCRCPTRNLISYFQGEVPVVGRL*SHSLEI
Trigger: TATTTCCAAACTGTGTGACAAGAGCCTACCTACCAC...TGGCACTTCCCCCTGGAAATAACTAATGAGGTTACGAGTTGGGCACCTGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCTGGTCTCCACGGCATTaGTCAGCTTCTGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: AFVSFCCWFEVGEMALWFWSPRH*SASVVG
Trigger: ACCAACAACAGAAGCTGACAAATGCCGTGGAGACCA...GAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS CCA 90 bp GTAATCTTTCTACTGACAGGCCACATGGCAATACTGAGAAGTGAATaGGGAGAGTGGGACTGTTCACTACCAACTGAAGCTGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VIFLLTGHMAILRSE*GEWDCSLPTEAVAN
Trigger: GTTTGCCACAGCTTCAGTTGGTAGTGAACAGTCCCACTCTCCCCATTCACTTCTCAGTATTGCCATGTGGCCTGTCAGTAGAAAGATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566338.5
CDS-3UTR CAA 90 bp ACACGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 5 (lower is better)
Translates to: TRGRITPCRLAGLENHSLTFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...TAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp AGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACACCGTGCGTAGCTGGAGGTCTGTaGGCTGGGAATAATGAGCTA +
Preference number: 5 (lower is better)
Translates to: SFHSFMCVPETRGRITPCVAGGL*AGNNEL
Trigger: TAGCTCATTATTCCCAGCCAACAGACCTCCAGCTAC...GCACGGTGTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp GTCTCCACGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCATGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: VSTAFVSFCCWFEVGEMACCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...TGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCGTGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGATGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRCCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGGTCAATCTTCCTCTGCTGCAGCACGTCTTTGATGAGGGCCATTCGCACAAGAAAGCCTTGTTTGTTTTaGAGGGCGAGTTTTGGCATA +
Preference number: 5 (lower is better)
Translates to: WSIFLCCSTSLMRAIRTRKPCLF*RASFGI
Trigger: TATGCCAAAACTCGCCCTCAAAAACAAACAAGGCTT...TCTTGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCAGAGGAAGATTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp TTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGATGGTCTCCACGGCATTaGTCAGCTTCTGTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: FVSFCCWFEVGEMALWFRWSPRH*SASVVG
Trigger: ACCAACAACAGAAGCTGACAAATGCCGTGGAGACCA...TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp CCTAAAATAGGGATCCAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAATCAGGTACTGAGACTTaGTGGGCCTCAGACACCAGG +
Preference number: 5 (lower is better)
Translates to: PKIGIQHHLNKRSYTTAQSGTET*WASDTR
Trigger: CCTGGTGTCTGAGGCCCACAAAGTCTCAGTACCTGA...TTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCCCTATTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp CTGCTTCAGTTTTACAAATGCTGCCTGTACTTCTTGAATATTAGGCAAGGTCTTGAGCCAGACCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LLQFYKCCLYFLNIRQGLEPDRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGTCTGGCTC...AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCATTTGTAAAACTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568547.5
CDS-3UTR CAA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 5 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPTFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GGAAGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GSTCPLDFSVPIRVSFKENFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...CTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp AGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAATTTCAGTTTCTGGTaGGGGCCTAGGACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: STCPLDFSVPIRVSFKEWNFSFW*GPRTFC
Trigger: GCAGAAAGTCCTAGGCCCCAACCAGAAACTGAAATT...CCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp TCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: SVVGSRWVKWHFGSEWFQEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...TTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp CGGCATTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTGCTGCCTGTACTTCTaGAATATTAGGCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RHLSASVVGSRWVKWHFGCCLYF*NIRQGL
Trigger: AAGACCTTGCCTAATATTCAAGAAGTACAGGCAGCA...ACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGTTCTGGCTGTCGGTTaGCTGAGCTGGATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLVLAVG*LSWIWL
Trigger: AAGCCAGATCCAGCTCAGCAAACCGACAGCCAGAAC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTTCCTAACTTTCCTGTaGTCTGCTGCCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLFLTFL*SAAWGC
Trigger: GCAGCCCCAGGCAGCAGACAACAGGAAAGTTAGGAA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CGTGGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAACTGAAAAAGAGGTGTTaGGTTACGTGTGAGCCAACA +
Preference number: 5 (lower is better)
Translates to: RGRITPCRLAGLENHSLKLKKRC*VTCEPT
Trigger: TGTTGGCTCACACGTAACCAAACACCTCTTTTTCAG...TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp AGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 5 (lower is better)
Translates to: SFCCWFEVGEMALWFRMVTFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...AACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp AGCACCTGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 5 (lower is better)
Translates to: STCPLDFSVPIRVSFKEWTFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...CCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACAGGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTAGCAAATTCCGTGCTTaGCTTCACTCGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFSKFRA*LHSLVR
Trigger: CCTCACCAGCGAGTGAAGCAAAGCACGGAATTTGCT...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp TCTTGGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAAGTGGATATAACACCGTGCAGGTaGGCGGGTTTGGAAAACCAT +
Preference number: 5 (lower is better)
Translates to: SWSAKELGTTMYSGRQVDITPCR*AGLENH
Trigger: ATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTAT...ATCCACTTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGCTCACTATGAGGGCAATCCTCTTCCTAGAAAGGCTTCCTGAAGGTCCACAAGGCATAAGTGTTAGTTaGACAGATCCATTTTACAGG +
Preference number: 5 (lower is better)
Translates to: ELTMRAILFLERLPEGPQGISVS*TDPFYR
Trigger: CCTGTAAAATGGATCTGTCAAACTAACACTTATGCC...TTGTGGACCTTCAGGAAGCCTTTCTAGGAAGAGGATTGCCCTCATAGTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp AGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGACCACAAATCGTACTGGCTaGTGTCTGTTGCAATGCATT +
Preference number: 5 (lower is better)
Translates to: RWVKWHFGSEWFQVWLETTNRTG*CLLQCI
Trigger: AATGCATTGCAACAGACACAAGCCAGTACGATTTGT...GGTCTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTGTAGCTGGAGGTCTGTaGGCTGGGAATAATGAGCTA +
Preference number: 5 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLVAGGL*AGNNEL
Trigger: TAGCTCATTATTCCCAGCCAACAGACCTCCAGCTAC...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435680.6
CDS-3UTR CAA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTGCTGCAGCACGTCTTaGATGAGGGCCATTCGCACA +
Preference number: 5 (lower is better)
Translates to: LSSMYTSSAECLRNALTYCCSTS*MRAIRT
Trigger: TGTGCGAATGGCCCTCATCAAAGACGTGCTGCAGCA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GCGGAAGTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGGCCCCACTTAAAAATTaGCTTAATGGTGTTCCTAAA +
Preference number: 5 (lower is better)
Translates to: AEVAQFPQFYVCSRDTWQAPLKN*LNGVPK
Trigger: TTTAGGAACACCATTAAGCAAATTTTTAAGTGGGGC...CTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTACTTCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCAACTCGTAACCTCGTAGACAACCATATTTaGGCCCCACTTAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: ALGTMREGHLCRCPTRNLVDNHI*APLKNL
Trigger: CAAATTTTTAAGTGGGGCCAAAATATGGTTGTCTAC...GAGGTTACGAGTTGGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GTAGCACAGTTTCCACAGTTTTATGTGTGTTCCAGAGACACGTGGCAGAATAACGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: VAQFPQFYVCSRDTWQNNDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...GTTATTCTGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CCTCTATTCCTAAGCATTAGGAACTATGAGAGAAGGACATCTGTGCAGGTGCCCTCTTGCTCATCCCACTaGAACTCAAGTCATCAATTT +
Preference number: 5 (lower is better)
Translates to: PLFLSIRNYERRTSVQVPSCSSH*NSSHQF
Trigger: AAATTGATGACTTGAGTTCAAGTGGGATGAGCAAGA...GGGCACCTGCACAGATGTCCTTCTCTCATAGTTCCTAATGCTTAGGAATAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTATCTTCGGTTCCGAATaGATCTTATCGTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAIFGSE*ILSSVW
Trigger: CCAGACTGACGATAAGATCAATTCGGAACCGAAGAT...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTCTGATCTTCGGTTCCGAATaGATCTTATCGTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: PLDFSVPIRVSFKEWSFLIFGSE*ILSSVW
Trigger: CCAGACTGACGATAAGATCAATTCGGAACCGAAGAT...CAGAAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564787.1
ENST00000567567.5
CDS-3UTR CAA 90 bp CCTAAAATAGGGATCCAGCATCACTTGAACAAGAGAAGCTACACAACAGCTCAAATCTTCGGTTCCGAATaGATCTTATCGTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: PKIGIQHHLNKRSYTTAQIFGSE*ILSSVW
Trigger: CCAGACTGACGATAAGATCAATTCGGAACCGAAGAT...TTGAGCTGTTGTGTAGCTTCTCTTGTTCAAGTGATGCTGGATCCCTATTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp AAGGTGTCATCCAGAAGTTCAAGAGTGGATGAGTGGGCATCTTTCACTCACAAAACAAATCGTACTGGCTaGTGTCTGTTGCAATGCATT +
Preference number: 5 (lower is better)
Translates to: KVSSRSSRVDEWASFTHKTNRTG*CLLQCI
Trigger: AATGCATTGCAACAGACACAAGCCAGTACGATTTGT...TTTGTGAGTGAAAGATGCCCACTCATCCACTCTTGAACTTCTGGATGACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTACTTTCTGCTTCCTCTaGTGGTCGTTTACTGTGACA +
Preference number: 5 (lower is better)
Translates to: ERFRSSKQLCLLILLNFATFCFL*WSFTVT
Trigger: TGTCACAGTAAACGACCACAAGAGGAAGCAGAAAGT...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TCTTGTAGGACTACAGAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAAGCACCTGTCCTCTaGATTTCTCTGTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: SCRTTERCLLSSMYTSSAEAPVL*ISLSQS
Trigger: GGATTGGGACAGAGAAATCAAGAGGACAGGTGCTTC...AGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTGTGGTAGGTAGGCTCTaGTCACACAGTTTGGAAATA +
Preference number: 5 (lower is better)
Translates to: ERFRSSKQLCLLILLNFAVVGRL*SHSLEI
Trigger: TATTTCCAAACTGTGTGACAAGAGCCTACCTACCAC...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp GGCAGAATAACACCGTGCAGGTTGGCGGGTTTGGAAAACCATTCTCTAAAATACTCTTGCTCATCCCACTaGAACTCAAGTCATCAATTT +
Preference number: 5 (lower is better)
Translates to: GRITPCRLAGLENHSLKYSCSSH*NSSHQF
Trigger: AAATTGATGACTTGAGTTCAAGTGGGATGAGCAAGA...GTATTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCACGGTGTTATTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp TCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGGCTTGAGATCTTCGGTTCCGAATaGATCTTATCGTCAGTAAGT +
Preference number: 5 (lower is better)
Translates to: SRWVKWHFGSEWFQVWLEIFGSE*ILSSVS
Trigger: ACTTACTGACGATAAGATCAATTCGGAACCGAAGAT...CTCAAGCCAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS-3UTR CAA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTACAAATCGTACTGGCTaGTGTCTGTTGCAATGCATT +
Preference number: 5 (lower is better)
Translates to: ERFRSSKQLCLLILLNFATNRTG*CLLQCI
Trigger: AATGCATTGCAACAGACACAAGCCAGTACGATTTGT...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TTTGTCAGCTTCTGTTGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: FVSFCCWFEVGEMALWFRTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...TCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACAACAGAAGCTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp CTTTTCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTATACAAGGTGTGGACAACATGAACAGTTaGATCACGGTTACAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LFFVRLKDFTEPFCIQGVDNMNS*ITVTRA
Trigger: GGCTCTTGTAACCGTGATCAAACTGTTCATGTTGTC...CACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp TTACGTTCAATACTAGAAATTTCACCCAGTGCATCAGCATCTGTGCGGCATTCCTCAAGTTTTAACCACTaGAGGTTACTACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LRSILEISPSASASVRHSSSFNH*RLLLQQ
Trigger: TTGCTGCAGTAGTAACCTCAAGTGGTTAAAACTTGA...GGAATGCCGCACAGATGCTGATGCACTGGGTGAAATTTCTAGTATTGAACGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTTGGTTCGAGGTGGGTGAAATGGCACTTTGGTTCAGAATGGTTTCAAGTTTGACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: CWFEVGEMALWFRMVSSLTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...CAAACTTGAAACCATTCTGAACCAAAGTGCCATTTCACCCACCTCGAACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563714.5
ENST00000566981.1
CDS-3UTR CAA 90 bp GAGAGATTCAGATCAAGCAAACAACTGTGTCTGCTCATTCTCCTCAACTTTGCTCTTCTCATCACCCAATaGGATGTTTTTGCTTATAGC +
Preference number: 5 (lower is better)
Translates to: ERFRSSKQLCLLILLNFALLITQ*DVFAYS
Trigger: GCTATAAGCAAAAACATCCAATTGGGTGATGAGAAG...AGCAAAGTTGAGGAGAATGAGCAGACACAGTTGTTTGCTTGATCTGAATCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CTTTCCAATGTAGAAGGGGTTATGGAAAAGGGTGCGATCCTTTGCTGTAAACTGGTAGACAACCATATTTaGGCCCCACTTAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: LSNVEGVMEKGAILCCKLVDNHI*APLKNL
Trigger: CAAATTTTTAAGTGGGGCCAAAATATGGTTGTCTAC...CAGTTTACAGCAAAGGATCGCACCCTTTTCCATAACCCCTTCTACATTGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TCTTGGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAAGTGGATTTTCTAGGCAACAAGTaGGCAAAAACCTTGGGTTTA +
Preference number: 5 (lower is better)
Translates to: SWSAKELGTTMYSGRQVDFLGNK*AKTLGL
Trigger: TAAACCCAAGGTTTTTGCCAACTTGTTGCCTAGAAA...ATCCACTTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGTGCAGCAAGCAGATTTaGTTGACAAATGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWCSKQI*LTNVNS
Trigger: GCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCA...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTGCAGCAAGCAGATTTaGTTGACAAATGTGAACAGC +
Preference number: 5 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLCSKQI*LTNVNS
Trigger: GCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp TCTTGGTCTGCTAAAGAACTTGGCACTACAATGTATTCTGGAAGGCAAGTGGATACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: SWSAKELGTTMYSGRQVDTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...ATCCACTTGCCTTCCAGAATACATTGTAGTGCCAAGTTCTTTAGCAGACCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567567.5
ENST00000568547.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTACATATTGCAGGTTGGCGGGTTaGGAAAACCATTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: LSSMYTSSAECLRNALTYCRLAG*ENHSLK
Trigger: TTTTAGAGAATGGTTTTCCAAACCCGCCAACCTGCA...ATATGTAAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp CTAAAAATGACACGAAACACAAATTTCCTAACTTTCCTGTTGTCTGCTGCCTGGTTTCTAGGCAACAAGTaGGCAAAAACCTTGGGTTTA +
Preference number: 5 (lower is better)
Translates to: LKMTRNTNFLTFLLSAAWFLGNK*AKTLGL
Trigger: TAAACCCAAGGTTTTTGCCAACTTGTTGCCTAGAAA...CCAGGCAGCAGACAACAGGAAAGTTAGGAAATTTGTGTTTCGTGTCATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS-3UTR CAA 90 bp CACTTGAGGTTACTACTGCAGCAAGCAGATTTTGTTGACAAATGTGAACAGCTTTCAAGTTTTAACCACTaGAGGTTACTACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: HLRLLLQQADFVDKCEQLSSFNH*RLLLQQ
Trigger: TTGCTGCAGTAGTAACCTCAAGTGGTTAAAACTTGA...AAGCTGTTCACATTTGTCAACAAAATCTGCTTGCTGCAGTAGTAACCTCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435680.6
ENST00000568604.5
CDS TCA 90 bp GACATCCACAAAAACCTACAATTAATGTTATTCCCATTTCACTGGTaGAAGACTGGATACTCTCTCCCTAAGATCAGGAAGATGATAAGG +
Preference number: 5 (lower is better)
Translates to: DIHKNLQLMLFPFHW*KTGYSLPKIRKMIR
Trigger: CCTTATCATCTTCCTGATCTTAGGGAGAGAGTATCCAGTCTTTCACCAGTGAAATGGGAATAACATTAATTGTAGGTTTTTGTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566338.5
CDS-3UTR CAA 90 bp CTTTTCTTTGTCCGTTTAAAAGACTTCACGGAGCCATTCTGTATACAAGGTGTGACTACAGAGAGATGTTaGCTTTCTAGCATGTATACA +
Preference number: 5 (lower is better)
Translates to: LFFVRLKDFTEPFCIQGVTTERC*LSSMYT
Trigger: TGTATACATGCTAGAAAGCAAACATCTCTCTGTAGT...CACACCTTGTATACAGAATGGCTCCGTGAAGTCTTTTAAACGGACAAAGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTCCCAATTGGATGTTTTaGCTTATAGCAAATTCCGTG +
Preference number: 5 (lower is better)
Translates to: CLLSSMYTSSAECLRNALPNWMF*LIANSV
Trigger: CACGGAATTTGCTATAAGCAAAAACATCCAATTGGG...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTGCCCCACTTAAAAATTaGCTTAATGGTGTTCCTAAA +
Preference number: 5 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFAPLKN*LNGVPK
Trigger: TTTAGGAACACCATTAAGCAAATTTTTAAGTGGGGC...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp TCTTGTAGGACTACAGAGAGATGTTTGCTTTCTAGCATGTATACAAGTTCTGCTAGCCAACATCACGTTTaGTTAGCTGTGATTTACCTT +
Preference number: 5 (lower is better)
Translates to: SCRTTERCLLSSMYTSSASQHHV*LAVIYL
Trigger: AAGGTAAATCACAGCTAACAAAACGTGATGTTGGCT...AGCAGAACTTGTATACATGCTAGAAAGCAAACATCTCTCTGTAGTCCTACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568604.5
CDS-3UTR CAA 90 bp TGTCCTCTTGATTTCTCTGTCCCAATCCGAGTAAGTTTCAAAGAGTGGAGTTTTGGAATTCCATTAATTTaGTTTGCTGCCTGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: CPLDFSVPIRVSFKEWSFGIPLI*FAACKK
Trigger: CTTTTTGCAGGCAGCAAACAAAATTAATGGAATTCC...AAAACTCCACTCTTTGAAACTTACTCGGATTGGGACAGAGAAATCAAGAGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567567.5
CDS-3UTR CAA 90 bp TGTTTGCTTTCTAGCATGTATACAAGTTCTGCTGAATGCTTAAGGAATGCCCTTGTAGACAACCATATTTaGGCCCCACTTAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: CLLSSMYTSSAECLRNALVDNHI*APLKNL
Trigger: CAAATTTTTAAGTGGGGCCAAAATATGGTTGTCTAC...AAGGGCATTCCTTAAGCATTCAGCAGAACTTGTATACATGCTAGAAAGCAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567567.5
ENST00000568604.5
CDS CCA 72 bp CGCGCTGCTGTGGGCAGGGAGACGCGCGCAGCCTCCTaGGGTCCTCCAGTTCCCGGGGGTCGGCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: RAAVGRETRAAS*GPPVPGGRPGG
Trigger: GCCTCCAGGCCGACCCCCGGGAACTGGAGGACCCCAGGAGGCTGCGCGCGTCTCCCTGCCCACAGCAGCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS CCA 72 bp TTTCGCGGCGCCGGGAATCAGGCAGCCGCGCTGCTGTaGGCAGGGAGACGCGCGCAGCCTCCTGGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: FRGAGNQAAALL*AGRRAQPPGVL
Trigger: GAGGACCCCAGGAGGCTGCGCGCGTCTCCCTGCCCACAGCAGCGCGGCTGCCTGATTCCCGGCGCCGCGAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS CCA 72 bp ATTGATCTTATCGTCAGTAAGTTTTCGCCGAGCCAGTaGGGGCTCCCGAGAAGGCGCATTTCGCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: IDLIVSKFSPSQ*GLPRRRISRRR
Trigger: CCGGCGCCGCGAAATGCGCCTTCTCGGGAGCCCCCACTGGCTCGGCGAAAACTTACTGACGATAAGATCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563714.5
CDS CAA 72 bp AAACGTAGCCACAGCCACAGGGTTGCTTACCGTGCTTaGCTTCACTCGCTGGTGAGGGGAGTTGAACAGGAA +
Preference number: 6 (lower is better)
Translates to: KRSHSHRVAYRA*LHSLVRGVEQE
Trigger: TTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTAAGCAACCCTGTGGCTGTGGCTACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565728.5
CDS CAA 90 bp AAACAGGGAAAACGTAGCCACAGCCACAGGGTTGCTTACCGTGCTTaGCTTCACTCGCTGGTGAGGGGAGTTGAACAGGAAGGTGCCAAA +
Preference number: 6 (lower is better)
Translates to: KQGKRSHSHRVAYRA*LHSLVRGVEQEGAK
Trigger: TTTGGCACCTTCCTGTTCAACTCCCCTCACCAGCGAGTGAAGCAAAGCACGGTAAGCAACCCTGTGGCTGTGGCTACGTTTTCCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565728.5
CDS CCA 72 bp ATGAGTAGGGTTCTCCAATACGATGAGAACACCCACTaGATGAGAGAAATTGTGATTATTAGGCTCTGCATG +
Preference number: 6 (lower is better)
Translates to: MSRVLQYDENTH*MREIVIIRLCM
Trigger: CATGCAGAGCCTAATAATCACAATTTCTCTCATCCAGTGGGTGTTCTCATCGTATTGGAGAACCCTACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566338.5
CDS CCA 72 bp TGTACAATAAGGCCTTGGGCACTGGGAGCATCATCTTaGGGCAGTGATTATAGATACTATTTACATGTTTTT +
Preference number: 6 (lower is better)
Translates to: CTIRPWALGASS*GSDYRYYLHVF
Trigger: AAAAACATGTAAATAGTATCTATAATCACTGCCCCAAGATGATGCTCCCAGTGCCCAAGGCCTTATTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568611.5
CDS CAA 90 bp TGGAATTTCTGTAATGGCATTGGGTCATCTGTAATAAAGGAGATTTaGAAGTTACTGCATATCAGCTTTCCCCACAAATCGTACTGGCTT +
Preference number: 6 (lower is better)
Translates to: WNFCNGIGSSVIKEI*KLLHISFPHKSYWL
Trigger: AAGCCAGTACGATTTGTGGGGAAAGCTGATATGCAGTAACTTCAAAATCTCCTTTATTACAGATGACCCAATGCCATTACAGAAATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435680.6
ENST00000563714.5
ENST00000565728.5
ENST00000567567.5
ENST00000568604.5
ENST00000621195.3
CDS TCA 72 bp TATTGCAAGGCATACCTTTTTAGCACTTTCGGGACCTaGTTCATCAAAGCGAAATCTGACAATTCTGAAATC +
Preference number: 6 (lower is better)
Translates to: YCKAYLFSTFGT*FIKAKSDNSEI
Trigger: GATTTCAGAATTGTCAGATTTCGCTTTGATGAATCAGGTCCCGAAAGTGCTAAAAAGGTATGCCTTGCAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435680.6
ENST00000563714.5
ENST00000567567.5
ENST00000621195.3
CDS TCA 72 bp TATCAAAGTCAGCCAGGGAAATCAGAAGACAACTATTaGCCAATATCCCTTATGATTACAGATGTAAAAATC +
Preference number: 6 (lower is better)
Translates to: YQSQPGKSEDNY*PISLMITDVKI
Trigger: GATTTTTACATCTGTAATCATAAGGGATATTGGTCAATAGTTGTCTTCTGATTTCCCTGGCTGACTTTGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566338.5