Pregenerated sensors for MTM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171100Ensembl transcript IDs: ENST00000306167.11, ENST00000370393.5, ENST00000370396.7, ENST00000424519.1, ENST00000490530.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTACAAATGCCCCAAATaGAAGTCAGCTATCGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SNICENIPLSSRMLPTSLYKCPK*KSAIAF Trigger: AAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCTCCTTTCTTCTGATTaGCGTGTGGACCCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SKDDALAIAHASKTVALHLLSSD*RVDPVV Trigger: AACTACAGGGTCCACACGGCAATCAGAAGAAAGGAG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGCTCTCTTTGGGGTTTaGCACAACCCGAAAACCATT | + |
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Preference number: 2 (lower is better) Translates to: SKDDALAIAHASKTVALHALFGV*HNPKTI Trigger: AATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR CCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTTGCTCCCGACATCCTTaGACAGTGCTCTCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QPEKANGLVLQVKICRTSCSRHP*TVLSLG Trigger: CCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCA...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTTAAGTCACCACTCATaGTGGTATAAAAGCTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: SKDDALAIAHASKTVALHLSHHS*WYKSWQ Trigger: TTGCCAGCTTTTATACCATCATGAGTGGTGACTTAA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR TCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTCTACATTTTGGCAGATaGGCTGGACTGACTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QPEKANGLVLQVKICRTSLHFGR*AGLTRA Trigger: TGCTCTAGTCAGTCCAGCTCATCTGCCAAAATGTAG...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTTCTAGCAATAGCTCATaGATCCAAGACGGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QPEKANGLVLQVKICRTSSSNSS*IQDGSP Trigger: AGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGA...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGTTTTGGCAGTAACATaGATCTTTCACATTTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SKDDALAIAHASKTVALHVLAVT*IFHIWI Trigger: AATCCAAATGTGAAAGATGCATGTTACTGCCAAAAC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR GCA 72 bp | CCTAAGCAGCAGGATGCTCCCGACATCCTTGGACAGTaGTCTCTTTGGGGTTTGCCACAACCCGAAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: PKQQDAPDILGQ*SLWGLPQPENH Trigger: ATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCATCCTGCTGCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR CCA 72 bp | CAGGATGCTCCCGACATCCTTGGACAGTGCTCTCTTTaGGGTTTGCCACAACCCGAAAACCATTCCGAATTT | + |
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Preference number: 3 (lower is better) Translates to: QDAPDILGQCSL*GLPQPENHSEF Trigger: AAATTCGGAATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTGCTCTCTTTGGGGTTaGCCACAACCCGAAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SNICENIPLSSRMLPTSLCSLWG*PQPENH Trigger: ATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGCA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR TCA 72 bp | CATGCATCCAAGACGGTAGCCCTACATTTTGGCAGATaGGCTGGACTGACTAGAGCAACATTTGCGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HASKTVALHFGR*AGLTRATFAKT Trigger: TGTTTTCGCAAATGTTGCTCTAGTCAGTCCAGCTCATCTGCCAAAATGTAGGGCTACCGTCTTGGATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGAAGCTGAGCTCAATTaGGTTTTGGCAGTAACATGC | + |
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Preference number: 3 (lower is better) Translates to: SKDDALAIAHASKTVALHEAELN*VLAVTC Trigger: GCATGTTACTGCCAAAACCAAATTGAGCTCAGCTTC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR CAA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTATGCTCCCGACATCCTaGGACAGTGCTCTCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPEKANGLVLQVKICRTSMLPTS*DSALFG Trigger: CCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCAT...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGAGCTCAATTTGGTTTaGGCAGTAACATGCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: SKDDALAIAHASKTVALHELNLV*AVTCIF Trigger: AAAGATGCATGTTACTGCCAAAACCAAATTGAGCTC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR TCA 72 bp | CATCTATACAGCTATTTCTCCTTAAGTCACCACTCATaGTGGTATAAAAGCTGGCAATTACTTAAACACCTT | + |
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Preference number: 3 (lower is better) Translates to: HLYSYFSLSHHS*WYKSWQLLKHL Trigger: AAGGTGTTTAAGTAATTGCCAGCTTTTATACCATCATGAGTGGTGACTTAAGGAGAAATAGCTGTATAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR CAA 72 bp | AACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTaGGACAGTGCTCTCTTTGGGGTTTGCCACAACCCG | + |
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Preference number: 4 (lower is better) Translates to: NIPLSSRMLPTS*DSALFGVCHNP Trigger: CGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGATGCAGAAGCCATCCTaGAAACTCTCGGGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLMQKPS*KLSGSG Trigger: CCCGGAGCCCGAGAGTTTCCAGGATGGCTTCTGCAT...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| 3UTR CAA 72 bp | GCAGGATGCTCCCGACATCCTTGGACAGTGCTCTCTTaGGGGTTTGCCACAACCCGAAAACCATTCCGAATT | + |
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Preference number: 4 (lower is better) Translates to: AGCSRHPWTVLS*GFATTRKPFRI Trigger: AATTCGGAATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCATCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGGGGATCAGAAAGCTTaGCAGAGTTGGCGAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLGDQKA*QSWRAA Trigger: TGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGTTATTCTCCAATGGTaGTTGGGCAAGCCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLVILQW*LGKPCL Trigger: GAGGCAGGGCTTGCCCAATCACCATTGGAGAATAAC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTTCTCCAATGGTGATTaGGCAAGCCCTGCCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLFSNGD*ASPASC Trigger: ACAGGAGGCAGGGCTTGCCCAATCACCATTGGAGAA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGAATAATGGCAGACTGTaGGCCAGGGGAAACGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLNNGRL*ARGNAY Trigger: ATACGCGTTTCCCCTGGCTCACAGTCTGCCATTATT...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTCGGGACCTAAAAGTTaGAACTCTCCGGAGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLSGPKS*NSPEVI Trigger: GATGACCTCCGGAGAGTTGCAACTTTTAGGTCCCGA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGCAGAGTTGGCGAGCTaGAGTTCCTCAAGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHAELAS*SSSSRF Trigger: AAAGCGGCTTGAGGAACTGCAGCTCGCCAACTCTGC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGACATCCTTGGACAGTaGTCTCTTTGGGGTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLDILGQ*SLWGLP Trigger: TGGCAAACCCCAAAGAGAGCACTGTCCAAGGATGTC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGGATTCGGCTGTTGTTaGTTGATCCTGGGGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLGFGCC*LILGFH Trigger: ATGGAACCCCAGGATCAAGCAACAACAGCCGAATCC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTGCTCCCGACATCCTTaGACAGTGCTCTCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHCSRHP*TVLSLG Trigger: CCCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGGTAGCCCTACATTTTaGCAGATGAGCTGGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLGSPTF*QMSWTD Trigger: GTCAGTCCAGCTCATCTGCCAAAATGTAGGGCTACC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATATACCGACAAGAGGCTaGCTGCAACGCACAATGACC | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHIPTRG*LQRTMT Trigger: GGTCATTGTGCGTTGCAGTCAGCCTCTTGTCGGTAT...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTGCCTTGTTGGCCACTaGATTTACGCTGGGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHCLVGH*IYAGSC Trigger: GCAAGACCCAGCGTAAATGCAGTGGCCAACAAGGCA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGCTCTCTTTGGGGTTTaGCACAACCCGAAAACCATT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLALFGV*HNPKTI Trigger: AATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCTCCTGTTGCCTTGTTaGCCACTGCATTTACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHLLLPC*PLHLRW Trigger: CCAGCGTAAATGCAGTGGCCAACAAGGCAACAGGAG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTATCCAACATCAGCATaGCCAAGGATGTCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLYPTSA*PRMSAE Trigger: CTCAGCTGACATCCTTGGCCATGCTGATGTTGGATA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTATATGCACGCGTGGGGTaGGGAGGGGAAGCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALYARVG*GGEANT Trigger: GGTGTTGGCTTCCCCTCCCCACCCCACGCGTGCATA...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGACTGCAACGCACAATaGCCGTCTTATTTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLDCNAQ*PSYFLD Trigger: ATCCAGAAAATAAGACGGTCATTGTGCGTTGCAGTC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAGCCAAGGATGTCAGCTaGGCAGTCCTGTCCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALAKDVS*AVLSHP Trigger: CGGATGGGACAGGACTGCTCAGCTGACATCCTTGGC...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTGTCTGCTACTTGAATaGCTCCTGTCAAAACGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLCLLLE*LLSKRA Trigger: AGCTCGTTTTGACAGGAGCCATTCAAGTAGCAGACA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGTAACGCTGCTCCACTaGATTCGGCTGTTGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHVTLLH*IRLLLL Trigger: AAGCAACAACAGCCGAATCCAGTGGAGCAGCGTTAC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTACCGGAGGTCATCATCTaGGGCACGATACGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALPEVII*GTIRNH Trigger: GTGGTTCCGTATCGTGCCTCAGATGATGACCTCCGG...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGTCTTATTTTCTGGATaGATCCATGACAGCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLVLFSG*IHDSTG Trigger: TCCAGTGCTGTCATGGATTCATCCAGAAAATAAGAC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCTACATTTTGGCAGATaGGCTGGACTGACTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHLHFGR*AGLTRA Trigger: TGCTCTAGTCAGTCCAGCTCATCTGCCAAAATGTAG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATGTACATCTGGGGCACTaGTTTCTAAGGATGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHVHLGH*FLRMML Trigger: GAGCATCATCCTTAGAAATCAGTGCCCCAGATGTAC...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGCCTGTATTCTTCCACTaGATTGTAAACTGTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLPVFFH*IVNCPS Trigger: GGATGGACAGTTTACAATCCAGTGGAAGAATACAGG...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTTAAGTCACCACTCATaGTGGTATAAAAGCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLLSHHS*WYKSWQ Trigger: TTGCCAGCTTTTATACCATCATGAGTGGTGACTTAA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTTTCGAACCCTTCAATaGTCCTATAGAAGCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLFRTLQ*SYRSYP Trigger: TGGATAGCTTCTATAGGAGCATTGAAGGGTTCGAAA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS-3UTR CCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCCACTGCATTTACGCTaGGTCTTGCATCATAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHPLHLR*VLHHKW Trigger: CCATTTATGATGCAAGACCCAGCGTAAATGCAGTGG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGATTATATTTAGAAGTTaGTGCAGAAGCCATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLIIFRS*CRSHPG Trigger: TCCAGGATGGCTTCTGCATCAACTTCTAAATATAAT...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAACCCAGAGTTCCAAGTaGCGCATACTGGCAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALTQSSK*RILATG Trigger: TCCAGTTGCCAGTATGCGTCACTTGGAACTCTGGGT...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTACGAAGGACTGGAAGGTaGAGTTGGGGGATCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALRRTGR*SWGIRK Trigger: CTTTCTGATCCCCCAACTTCACCTTCCAGTCCTTCG...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTTCGGCGTTATGATATaGATCATCACTTTCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: SNICENIPLSSRMLPTSLFGVMI*IITFIS Trigger: GGATATGAAAGTGATGATGCATATCATAACGCCGAA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCAAACATATCTCTTCTaGTGTGGCCTTCCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHQTYLF*CGLPVS Trigger: TGAAACAGGAAGGCCACAGCAGAAGAGATATGTTTG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAGGACAGTGCTCTCTTTaGGGTTTGCCACAACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALGQCSL*GLPQPE Trigger: TTCGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCC...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAGCAGATGAGCTGGACTaGCTAGAGCAACATTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALADELD*LEQHLR Trigger: TCGCAAATGTTGCTCTAGTCAGTCCAGCTCATCTGC...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTTGTCCCATCCGTCACTaGAATGCACAAGCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSCPIRH*NAQALN Trigger: GTTCAGTGCTTGTGCATTGCAGTGACGGATGGGACA...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTAAAGCTTGGCAGAGTTaGCGAGCTGCAGTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSKAWQS*RAAVPQ Trigger: TTGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTT...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATAAACTGGACAACCAATaGGATTCTTCTACATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHKLDNQ*DSSTLG Trigger: TCCTAATGTAGAAGAATCTCATTGGTTGTCCAGTTT...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTGGTTTTTATCACCATaGCCTATTCGAGATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKDDALAIAHASKTVALHWFLSP*PIRDAN Trigger: ATTTGCATCTCGAATAGGTCATGGTGATAAAAACCA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTATATCCTCCTCCTGTTaGCTTGTTGGCCACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSISSSC*LVGHCI Trigger: AATGCAGTGGCCAACAAGGCAACAGGAGGAGGATAT...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTACATCCGTCACTGCAATaGACAAGCACTGAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALHPSLQ*TSTELF Trigger: GAAGAGTTCAGTGCTTGTGCATTGCAGTGACGGATG...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTACATGGGGCATCATTTaGGAAGGACTGGAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSTWGII*EGLEGE Trigger: TTCACCTTCCAGTCCTTCGCAAATGATGCCCCATGT...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTCTCCTTTCTTCTGATTaGCGTGTGGACCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSLLSSD*RVDPVV Trigger: AACTACAGGGTCCACACGGCAATCAGAAGAAAGGAG...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTATCTAGCAATAGCTCATaGATCCAAGACGGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALSSNSS*IQDGSP Trigger: AGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGA...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTATCATTTGCGAAGGACTaGAAGGTGAAGTTGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALSFAKD*KVKLGD Trigger: ATCCCCCAACTTCACCTTCCAGTCCTTCGCAAATGA...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAGAAACGCGTATCTCGTaGGGATCTCAAACATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALETRIS*GSQTYL Trigger: GAGATATGTTTGAGATCCTCACGAGATACGCGTTTC...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTTTCTGGATGAATCCATaGCAGCACTGGAATTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSFWMNP*QHWNSI Trigger: AATCGAATTCCAGTGCTGTCATGGATTCATCCAGAA...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTATGTAGGGAACTGTTTTaGCATTTGCCACACACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALCRELF*HLPHTI Trigger: GATTGTGTGTGGCAAATGTCAAAACAGTTCCCTACA...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTCCAAGTGACGCATACTaGCAACTGGATATAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSPSDAY*QLDIKL Trigger: GAGTTTTATATCCAGTTGCCAGTATGCGTCACTTGG...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAATATGTTCTAACCAATaGGTAGACTCCAAACTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALICSNQ*VDSKLD Trigger: GTCCAGTTTGGAGTCTACTCATTGGTTAGAACATAT...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAAAAAGTTCGGCGTTATaGTATGCATCATCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFTNAPNESQLSPLFRALKSSAL*YASSLS Trigger: TGAAAGTGATGATGCATATCATAACGCCGAACTTTT...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR GCA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTATTTACGCTGGGTCTTaGATCATAAATGGTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPEKANGLVLQVKICRTSIYAGS*IINGEF Trigger: AAACTCACCATTTATGATGCAAGACCCAGCGTAAAT...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS TCA 90 bp | GAAGTGAGTTTGCACATGGGGCATCATTTGCGAAGGACTGGAAGGTaGAGTTGGGGGATCAGAAAGCTTGGCAGAGTTGGCGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVSLHMGHHLRRTGR*SWGIRKLGRVGELQ Trigger: CTGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAACTTCACCTTCCAGTCCTTCGCAAATGATGCCCCATGTGCAAACTCACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS GCA 90 bp | GAAGGTGAAGTTGGGGGATCAGAAAGCTTGGCAGAGTTGGCGAGCTaGAGTTCCTCAAGCCGCTTTATGTATTCGTCGCGTAAGGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGEVGGSESLAELAS*SSSSRFMYSSRKAK Trigger: CTTAGCCTTACGCGACGAATACATAAAGCGGCTTGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAACTTCACCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGTGGATTCGGCTGTTGTaGCTTGATCCTGGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SNICENIPLSSRMLPTSLWIRLL*LDPGVP Trigger: TGGAACCCCAGGATCAAGCAACAACAGCCGAATCCA...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS TCA 90 bp | TCGATTTCGGGACCTAAAAGTTGCAACTCTCCGGAGGTCATCATCTaGGGCACGATACGGAACCACCAAAAGAGCAGGGTAAGTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SISGPKSCNSPEVII*GTIRNHQKSRVSVT Trigger: TGTGACACTTACCCTGCTCTTTTGGTGGTTCCGTATCGTGCCTCAGATGATGACCTCCGGAGAGTTGCAACTTTTAGGTCCCGAAATCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306167.11 ENST00000370396.7 ENST00000490530.1 |
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| CDS-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCCTCCTGTTGCCTTGTaGGCCACTGCATTTACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKDDALAIAHASKTVALHPPVAL*ATAFTL Trigger: CAGCGTAAATGCAGTGGCCAACAAGGCAACAGGAGG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAGGGGGATCAGAAAGCTaGGCAGAGTTGGCGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFTNAPNESQLSPLFRALGGSES*AELASC Trigger: GCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCC...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCCCTCAGAAGTGAGTTaGCACATGGGGCATCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKDDALAIAHASKTVALHPSEVS*HMGHHL Trigger: CAAATGATGCCCCATGTGCAAACTCACTTCTGAGGG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGAAGCTGAGCTCAATTaGGTTTTGGCAGTAACATGC | + |
|
Preference number: 5 (lower is better) Translates to: SNICENIPLSSRMLPTSLEAELN*VLAVTC Trigger: GCATGTTACTGCCAAAACCAAATTGAGCTCAGCTTC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTGCTCTCTTTGGGGTTaGCCACAACCCGAAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SKDDALAIAHASKTVALHCSLWG*PQPENH Trigger: ATGGTTTTCGGGTTGTGGCAAACCCCAAAGAGAGCA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATTTCGGCTGTTGTTGCTaGATCCTGGGGTTCCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: SKDDALAIAHASKTVALHFGCCC*ILGFHL Trigger: TAGATGGAACCCCAGGATCAAGCAACAACAGCCGAA...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGAACTTTGTCTGCTACTaGAATGGCTCCTGTCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNICENIPLSSRMLPTSLNFVCY*NGSCQN Trigger: GTTTTGACAGGAGCCATTCAAGTAGCAGACAAAGTT...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTACCTCCTCCTGTTGCCTaGTTGGCCACTGCATTTACG | + |
|
Preference number: 5 (lower is better) Translates to: LFTNAPNESQLSPLFRALPPPVA*LATAFT Trigger: CGTAAATGCAGTGGCCAACAAGGCAACAGGAGGAGG...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTGAAAGCTTGGCAGAGTaGGCGAGCTGCAGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPEKANGLVLQVKICRTSESLAE*ASCSSS Trigger: TGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTC...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGGAGCTCAATTTGGTTTaGGCAGTAACATGCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SNICENIPLSSRMLPTSLELNLV*AVTCIF Trigger: AAAGATGCATGTTACTGCCAAAACCAAATTGAGCTC...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTATGGACAGTGCTCTCTTaGGGGTTTGCCACAACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LFTNAPNESQLSPLFRALWTVLS*GFATTR Trigger: TCGGGTTGTGGCAAACCCCAAAGAGAGCACTGTCCA...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTTACAAATGCCCCAAATGAAAGTCAGCTATCGCCTTTATTTCGAGCTCTAATGCTCCCGACATCCTaGGACAGTGCTCTCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFTNAPNESQLSPLFRALMLPTS*DSALFG Trigger: CCCAAAGAGAGCACTGTCCAAGGATGTCGGGAGCAT...TAGAGCTCGAAATAAAGGCGATAGCTGACTTTCATTTGGGGCATTTGTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTGCGAAAACATTCCCCTAAGCAGCAGGATGCTCCCGACATCCTTGACTTATCCATTCTTTTaGTACCAGTATTTCGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SNICENIPLSSRMLPTSLTYPFF*YQYFEP Trigger: GGGTTCGAAATACTGGTACAAAAAGAATGGATAAGT...CAAGGATGTCGGGAGCATCCTGCTGCTTAGGGGAATGTTTTCGCAAATGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTCACTGGATTCGGCTGTaGTTGCTTGATCCTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPEKANGLVLQVKICRTSHWIRL*LLDPGV Trigger: AACCCCAGGATCAAGCAACAACAGCCGAATCCAGTG...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTTCAGTGAGATCTCGATaGACTCCATCTCGAGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPEKANGLVLQVKICRTSSVRSR*TPSRDV Trigger: GACGTCTCGAGATGGAGTCAATCGAGATCTCACTGA...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS-3UTR CAA 90 bp | TCTAAGGATGATGCTCTAGCAATAGCTCATGCATCCAAGACGGTAGCCCTACATCGAGCAGATTCACAGTaGAATAAGAAAGTACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SKDDALAIAHASKTVALHRADSQ*NKKVPN Trigger: ATTTGGTACTTTCTTATTCAACTGTGAATCTGCTCG...ATGTAGGGCTACCGTCTTGGATGCATGAGCTATTGCTAGAGCATCATCCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370396.7 |
||
| CDS GCA 90 bp | CAAAACTTATCCATTCTTTTTGTACCAGTATTTCGAACCCTTCAATaGTCCTATAGAAGCTATCCAACATCAGCATGGCCAAGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QNLSILFVPVFRTLQ*SYRSYPTSAWPRMS Trigger: TGACATCCTTGGCCATGCTGATGTTGGATAGCTTCTATAGGAGCATTGAAGGGTTCGAAATACTGGTACAAAAAGAATGGATAAGTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS-3UTR CAA 90 bp | CAACCTGAAAAAGCAAACGGCCTGGTACTTCAAGTAAAAATTTGTAGAACCAGTGGGAAGCCAACACCATaGAAATTGAAATGCATAAAC | + |
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Preference number: 5 (lower is better) Translates to: QPEKANGLVLQVKICRTSGKPTP*KLKCIN Trigger: GTTTATGCATTTCAATTTCAATGGTGTTGGCTTCCC...ACTGGTTCTACAAATTTTTACTTGAAGTACCAGGCCGTTTGCTTTTTCAGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370396.7 |
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| CDS GCA 72 bp | GTTGGGGGATCAGAAAGCTTGGCAGAGTTGGCGAGCTaGAGTTCCTCAAGCCGCTTTATGTATTCGTCGCGT | + |
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Preference number: 6 (lower is better) Translates to: VGGSESLAELAS*SSSSRFMYSSR Trigger: ACGCGACGAATACATAAAGCGGCTTGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS CAA 72 bp | CATGGGGCATCATTTGCGAAGGACTGGAAGGTGAAGTaGGGGGATCAGAAAGCTTGGCAGAGTTGGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: HGASFAKDWKVK*GDQKAWQSWRA Trigger: AGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAACTTCACCTTCCAGTCCTTCGCAAATGATGCCCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS CAA 90 bp | GAGTTTGCACATGGGGCATCATTTGCGAAGGACTGGAAGGTGAAGTaGGGGGATCAGAAAGCTTGGCAGAGTTGGCGAGCTGCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EFAHGASFAKDWKVK*GDQKAWQSWRAAVP Trigger: AGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAACTTCACCTTCCAGTCCTTCGCAAATGATGCCCCATGTGCAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS TCA 72 bp | GGACCTAAAAGTTGCAACTCTCCGGAGGTCATCATCTaGGGCACGATACGGAACCACCAAAAGAGCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GPKSCNSPEVII*GTIRNHQKSRV Trigger: TACCCTGCTCTTTTGGTGGTTCCGTATCGTGCCTCAGATGATGACCTCCGGAGAGTTGCAACTTTTAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306167.11 ENST00000370396.7 ENST00000490530.1 |
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| CDS TCA 72 bp | ATGGCAGACTGTGAGCCAGGGGAAACGCGTATCTCGTaGGGATCTCAAACATATCTCTTCTGCTGTGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: MADCEPGETRIS*GSQTYLFCCGL Trigger: AAGGCCACAGCAGAAGAGATATGTTTGAGATCCTCACGAGATACGCGTTTCCCCTGGCTCACAGTCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370396.7 ENST00000490530.1 |
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| CDS CCA 72 bp | AGTGAGTTTGCACATGGGGCATCATTTGCGAAGGACTaGAAGGTGAAGTTGGGGGATCAGAAAGCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SEFAHGASFAKD*KVKLGDQKAWQ Trigger: CTGCCAAGCTTTCTGATCCCCCAACTTCACCTTCCAGTCCTTCGCAAATGATGCCCCATGTGCAAACTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS CAA 72 bp | GAAGGTGAAGTTGGGGGATCAGAAAGCTTGGCAGAGTaGGCGAGCTGCAGTTCCTCAAGCCGCTTTATGTAT | + |
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Preference number: 6 (lower is better) Translates to: EGEVGGSESLAE*ASCSSSSRFMY Trigger: ATACATAAAGCGGCTTGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTCTGATCCCCCAACTTCACCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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| CDS CAA 72 bp | CCTGGAAGTCGAGGAACAGCCTCAGTGAGATCTCGATaGACTCCATCTCGAGACGTCCTCTTAATAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: PGSRGTASVRSR*TPSRDVLLIDS Trigger: TGAGTCTATTAAGAGGACGTCTCGAGATGGAGTCAATCGAGATCTCACTGAGGCTGTTCCTCGACTTCCAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000306167.11 ENST00000370393.5 ENST00000370396.7 ENST00000424519.1 ENST00000490530.1 |
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| CDS CCA 72 bp | GTGATTGGGCAAGCCCTGCCTCCTGTATTCTTCCACTaGATTGTAAACTGTCCATCCATCCACGTTAAACTT | + |
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Preference number: 6 (lower is better) Translates to: VIGQALPPVFFH*IVNCPSIHVKL Trigger: AAGTTTAACGTGGATGGATGGACAGTTTACAATCCAGTGGAAGAATACAGGAGGCAGGGCTTGCCCAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306167.11 ENST00000370396.7 ENST00000490530.1 |
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| CDS GCA 72 bp | TCCATTCTTTTTGTACCAGTATTTCGAACCCTTCAATaGTCCTATAGAAGCTATCCAACATCAGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SILFVPVFRTLQ*SYRSYPTSAWP Trigger: TGGCCATGCTGATGTTGGATAGCTTCTATAGGAGCATTGAAGGGTTCGAAATACTGGTACAAAAAGAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306167.11 ENST00000370396.7 |
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