Pregenerated sensors for MTIF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000122033Ensembl transcript IDs: ENST00000381116.5, ENST00000381120.8, ENST00000405591.3, ENST00000460973.5, ENST00000461838.5, ENST00000464753.1, ENST00000471771.5, ENST00000483903.1, ENST00000484342.2, ENST00000485650.5, ENST00000485959.5, ENST00000493719.5
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCCAGTTGATGAGGAGAAGCTCTTCTGTGCTGGGGCAAGCGATTaGCATACTGTAGCGGACGCAAGTACAGCGGATCTGCGGCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: SPVDEEKLFCAGASD*HTVADASTADLRRV Trigger: GACTCGCCGCAGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGAAGAGCTTCTCCTCATCAACTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484342.2 |
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| CDS GCA 90 bp | CTGCCGCTCCTGGAGGATCTGCAATCCTGTCATGAGCTGATACTCTaGAGGTTCTGTGCTGGTGTTCCTTTGAACCAGTCGCAGGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: LPLLEDLQSCHELIL*RFCAGVPLNQSQVS Trigger: CGAGACCTGCGACTGGTTCAAAGGAACACCAGCACAGAACCTGCAGAGTATCAGCTCATGACAGGATTGCAGATCCTCCAGGAGCGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000381116.5 ENST00000381120.8 ENST00000405591.3 ENST00000460973.5 ENST00000461838.5 ENST00000471771.5 ENST00000485650.5 ENST00000485959.5 ENST00000493719.5 |
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| CDS TCA 90 bp | TCTCCCTCAGCCTCTGCCGCTCCTGGAGGATCTGCAATCCTGTCATaGGCTGATACTCTGCAGGTTCTGTGCTGGTGTTCCTTTGAACCA | + |
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Preference number: 5 (lower is better) Translates to: SPSASAAPGGSAILS*ADTLQVLCWCSFEP Trigger: TGGTTCAAAGGAACACCAGCACAGAACCTGCAGAGTATCAGCTCATGACAGGATTGCAGATCCTCCAGGAGCGGCAGAGGCTGAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000381116.5 ENST00000381120.8 ENST00000405591.3 ENST00000460973.5 ENST00000461838.5 ENST00000471771.5 ENST00000485650.5 ENST00000485959.5 ENST00000493719.5 |
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| CDS TCA 90 bp | AGCTCTTCTGTAGAGAAGAATGACAGCTGTGCTGGGGCAAGCGATTaGCATACTGTAGCGGACGCAAGTACAGCGGATCTGCGGCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSSVEKNDSCAGASD*HTVADASTADLRRV Trigger: GACTCGCCGCAGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGCTGTCATTCTTCTCTACAGAAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485650.5 |
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| CDS CAA 90 bp | GGCAGTAAGCCGCAAGAGCACTTCCGGGAGCCCCCGACCCGGTTGTaGGTAAGTCGGCGGCGACGCCCACCTGCAGAACGGGACCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSKPQEHFREPPTRL*VSRRRRPPAERDRR Trigger: CCGCCGGTCCCGTTCTGCAGGTGGGCGTCGCCGCCGACTTACCAACAACCGGGTCGGGGGCTCCCGGAAGTGCTCTTGCGGCTTACTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493719.5 |
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| CDS CAA 90 bp | CCAGGCAGTAAGCCGCAAGAGCACTTCCGGGAGCCCCCGACCCGGTaGTTGGTAAGTCGGCGGCGACGCCCACCTGCAGAACGGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: PGSKPQEHFREPPTR*LVSRRRRPPAERDR Trigger: CCGGTCCCGTTCTGCAGGTGGGCGTCGCCGCCGACTTACCAACAACCGGGTCGGGGGCTCCCGGAAGTGCTCTTGCGGCTTACTGCCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493719.5 |
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| CDS CAA 72 bp | CCGCAAGAGCACTTCCGGGAGCCCCCGACCCGGTTGTaGGTAAGTCGGCGGCGACGCCCACCTGCAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: PQEHFREPPTRL*VSRRRRPPAER Trigger: CCGTTCTGCAGGTGGGCGTCGCCGCCGACTTACCAACAACCGGGTCGGGGGCTCCCGGAAGTGCTCTTGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493719.5 |
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| CDS CAA 72 bp | AAGCCGCAAGAGCACTTCCGGGAGCCCCCGACCCGGTaGTTGGTAAGTCGGCGGCGACGCCCACCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KPQEHFREPPTR*LVSRRRRPPAE Trigger: TTCTGCAGGTGGGCGTCGCCGCCGACTTACCAACAACCGGGTCGGGGGCTCCCGGAAGTGCTCTTGCGGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493719.5 |
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| CDS TCA 72 bp | CCAGTTGATGAGGAGAAGCTCTTCTGTAGAGAAGAATaGCAGCTGCAGAACGGGACCGGCGGAGCGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PVDEEKLFCREE*QLQNGTGGAPG Trigger: CCCTGGCGCTCCGCCGGTCCCGTTCTGCAGCTGTCATTCTTCTCTACAGAAGAGCTTCTCCTCATCAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464753.1 |
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| CDS TCA 72 bp | TTAAGCCACGGAGCCCACTGTGCTGGGGCAAGCGATTaGCATACTGTAGCGGACGCAAGTACAGCGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: LSHGAHCAGASD*HTVADASTADL Trigger: CAGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGTGGGCTCCGTGGCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381116.5 |
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| CDS TCA 72 bp | GCCTCTGCCGCTCCTGGAGGATCTGCAATCCTGTCATaGGCTGATACTCTGCAGGTTCTGTGCTGGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASAAPGGSAILS*ADTLQVLCWCS Trigger: GGAACACCAGCACAGAACCTGCAGAGTATCAGCTCATGACAGGATTGCAGATCCTCCAGGAGCGGCAGAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000381116.5 ENST00000381120.8 ENST00000405591.3 ENST00000460973.5 ENST00000461838.5 ENST00000471771.5 ENST00000485650.5 ENST00000485959.5 ENST00000493719.5 |
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| CDS CAA 72 bp | CTTAAGCCACGGAGCCCACTGTGCTGGGGCAAGCGATaGACATACTGTAGCGGACGCAAGTACAGCGGATCT | + |
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Preference number: 6 (lower is better) Translates to: LKPRSPLCWGKR*TYCSGRKYSGS Trigger: AGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGTGGGCTCCGTGGCTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381116.5 |
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| CDS TCA 72 bp | GATGAGGAGAAGCTCTTCTGTGCTGGGGCAAGCGATTaGCATACTGTAGCGGACGCAAGTACAGCGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: DEEKLFCAGASD*HTVADASTADL Trigger: CAGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGAAGAGCTTCTCCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484342.2 |
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| CDS TCA 72 bp | GTAGAGAAGAATGACAGCTGTGCTGGGGCAAGCGATTaGCATACTGTAGCGGACGCAAGTACAGCGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: VEKNDSCAGASD*HTVADASTADL Trigger: CAGATCCGCTGTACTTGCGTCCGCTACAGTATGTCAATCGCTTGCCCCAGCACAGCTGTCATTCTTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381120.8 ENST00000485650.5 |
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| CDS TCA 72 bp | CCAGTTGATGAGGAGAAGCTCTTCTGTAGAGAAGAATaGCAGCTGTGCCAGGCAGTAAGCCGCAAGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: PVDEEKLFCREE*QLCQAVSRKST Trigger: AGTGCTCTTGCGGCTTACTGCCTGGCACAGCTGTCATTCTTCTCTACAGAAGAGCTTCTCCTCATCAACTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493719.5 |
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| CDS GCA 72 bp | CTGGAGGATCTGCAATCCTGTCATGAGCTGATACTCTaGAGGTTCTGTGCTGGTGTTCCTTTGAACCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LEDLQSCHELIL*RFCAGVPLNQS Trigger: CGACTGGTTCAAAGGAACACCAGCACAGAACCTGCAGAGTATCAGCTCATGACAGGATTGCAGATCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000381116.5 ENST00000381120.8 ENST00000405591.3 ENST00000460973.5 ENST00000461838.5 ENST00000471771.5 ENST00000485650.5 ENST00000485959.5 ENST00000493719.5 |
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| CDS TCA 72 bp | CCAGTTGATGAGGAGAAGCTCTTCTGTAGAGAAGAATaGCAGCTGTGCTGGGGCAAGCGATTGACATACTGT | + |
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Preference number: 6 (lower is better) Translates to: PVDEEKLFCREE*QLCWGKRLTYC Trigger: ACAGTATGTCAATCGCTTGCCCCAGCACAGCTGTCATTCTTCTCTACAGAAGAGCTTCTCCTCATCAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381120.8 ENST00000485650.5 |
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| CDS TCA 72 bp | CCAGTTGATGAGGAGAAGCTCTTCTGTAGAGAAGAATaGCAGTTGAAACTGAGACTTCTCAGTAAGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: PVDEEKLFCREE*QLKLRLLSKRT Trigger: AGTTCTCTTACTGAGAAGTCTCAGTTTCAACTGTCATTCTTCTCTACAGAAGAGCTTCTCCTCATCAACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471771.5 ENST00000485959.5 |
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| CDS CCA 72 bp | TCTTTAGAAAAAGAGCAGCCATCTATTAAGTGGAAGTaGATCACCATAAAGGTCTTCATCCTCATTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLEKEQPSIKWK*ITIKVFILIVF Trigger: GAAGACAATGAGGATGAAGACCTTTATGGTGATCCACTTCCACTTAATAGATGGCTGCTCTTTTTCTAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000381116.5 ENST00000460973.5 ENST00000483903.1 ENST00000485650.5 |
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| CDS CCA 72 bp | TTAACCTCTTTAGAAAAAGAGCAGCCATCTATTAAGTaGAAGTGGATCACCATAAAGGTCTTCATCCTCATT | + |
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Preference number: 6 (lower is better) Translates to: LTSLEKEQPSIK*KWITIKVFILI Trigger: AATGAGGATGAAGACCTTTATGGTGATCCACTTCCACTTAATAGATGGCTGCTCTTTTTCTAAAGAGGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000381116.5 ENST00000460973.5 ENST00000483903.1 ENST00000485650.5 |
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