Pregenerated sensors for MTHFD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000065911Ensembl transcript IDs: ENST00000394053.7, ENST00000488086.1, ENST00000489041.2, ENST00000677170.1, ENST00000677299.1, ENST00000677377.1, ENST00000677997.1, ENST00000678228.1, ENST00000678340.1, ENST00000678684.1, ENST00000678731.1, ENST00000678955.1, ENST00000679055.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCATTTTATCTTCAATCCACATTTAATGAACACCAACCATGTTaGTTTAATGCCTACTATGACCCTGACAGCCACAGTGCATCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QSFYLQSTFNEHQPC*FNAYYDPDSHSASD Trigger: GTCAGATGCACTGTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATGTGGATTGAAGATAAAATGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCTTGGGAGGCAGAGGTaGGGGGAATCAGCAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLGRQR*GESAEV Trigger: GACCTCTGCTGATTCCCCCCACCTCTGCCTCCCAAG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR GCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCCGAGAGGCAGAGGTTaGAGTGACCCGAGATCATGC | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNPRGRG*SDPRSC Trigger: GCATGATCTCGGGTCACTGCAACCTCTGCCTCTCGG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCTGTTTGGGTGTGGGTaGCCCAGGCCTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLFGCG*PRPVIP Trigger: TGGGATTACAGGCCTGGGCCACCCACACCCAAACAG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATGTAATCCCAGCCCTCTaGGAAGCTGAGGCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNVIPAL*EAEARG Trigger: TCCTCTTGCCTCAGCTTCCCAGAGGGCTGGGATTAC...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATACCTCTGTTTGGGTGTaGGTGGCCCAGGCCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNTSVWV*VAQACN Trigger: ATTACAGGCCTGGGCCACCCACACCCAAACAGAGGT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATTTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLRSGV*DQPGQC Trigger: ACATTGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATGGCACAAGAATTGTTTaGACCCGAGAGGCAGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNGTRIV*TREAEV Trigger: AACCTCTGCCTCTCGGGTTCAAACAATTCTTGTGCC...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAAGAATAACGCCAGCTaGCAGAAGAACGAGGACGGA | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNKNNAS*QKNEDG Trigger: TCCGTCCTCGTTCTTCTGCCAGCTGGCGTTATTCTT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAGAGGATTGATTGCTTaGGGCCAGGAGTTCAATACC | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNRGLIA*GQEFNT Trigger: GGTATTGAACTCCTGGCCTCAAGCAATCAATCCTCT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR GCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAGCAGGAGCTACTTCTaGTCGCATGAAAGCCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNSRSYF*SHESQK Trigger: CTTTTGGCTTTCATGCGAGCAGAAGTAGCTCCTGCT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCTACTTCTGCTCGCATaGAAGCCAAAAGCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLLLLA*KPKAKT Trigger: TGTTTTGGCTTTTGGCTTTCATGCGAGCAGAAGTAG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAACAAACAAAGAGACTaGAGGACGAGGCTGGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNNKQRD*RTRLVS Trigger: AGAAACCAGCCTCGTCCTCCAGTCTCTTTGTTTGTT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAGCCAGGGAGACAGCTaGAATCCATGTCTTATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNSQGDS*NPCLIN Trigger: GTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR CAA 90 bp | TGTATAAACCCCGAAAGATATAGTCTGATTTCCTATGACAAAGTTTaGGGATACAGTTCAATCACATTAGCCTCCTCTGCTTGGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CINPERYSLISYDKV*GYSSITLASSAWVS Trigger: GGAAACCCAAGCAGAGGAGGCTAATGTGATTGAACTGTATCCCAAAACTTTGTCATAGGAAATCAGACTATATCTTTCGGGGTTTATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678228.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAAATTTAATCCTGTCTaGTCATCTTGCTCCACATTT | + |
|
Preference number: 2 (lower is better) Translates to: LHSSQGDSWNPCLINNNNKFNPV*SSCSTF Trigger: AAATGTGGAGCAAGATGACCAGACAGGATTAAATTT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATTCTTTAAACCTCTGTTaGGGTGTGGGTGGCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LHSSQGDSWNPCLINNNNSLNLC*GVGGPG Trigger: GCCTGGGCCACCCACACCCAAACAGAGGTTTAAAGA...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATGCTGAGGCACAAGAATaGTTTGAACCCGAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LHSSQGDSWNPCLINNNNAEAQE*FEPERQ Trigger: CTGCCTCTCGGGTTCAAACAATTCTTGTGCCTCAGC...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATAAGAGGATTGATTGCTaGAGGCCAGGAGTTCAATAC | + |
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Preference number: 3 (lower is better) Translates to: LHSSQGDSWNPCLINNNNKRIDC*RPGVQY Trigger: GTATTGAACTCCTGGCCTCAAGCAATCAATCCTCTT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCTTAAGTATAAATTCTaGTCAGACACAGTGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLKYKF*SDTVAH Trigger: GTGAGCCACTGTGTCTGACAAGAATTTATACTTAAG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR TCA 72 bp | TATCTTCAATCCACATTTAATGAACACCAACCATGTTaGTTTAATGCCTACTATGACCCTGACAGCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLQSTFNEHQPC*FNAYYDPDSHS Trigger: ACTGTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATGTGGATTGAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| CDS-3UTR GCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCAGCTGTGCGCGGGCTaGAGCAGCCGGGCAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LHSSQGDSWNPCLINNNNQLCAG*SSRAAK Trigger: TTTGGCTGCCCGGCTGCTGCAGCCCGCGCACAGCTG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| CDS-3UTR GCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATTCAATATGCTCGAACTaGCGCGAGGTGGAAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LHSSQGDSWNPCLINNNNSICSN*REVERA Trigger: CGCCCTTTCCACCTCGCGGCAGTTCGAGCATATTGA...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677377.1 |
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| CDS-3UTR CCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATCTCATCAATATGCTCTaGAAGAGGCAACTGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: LHSSQGDSWNPCLINNNNLINML*KRQLNK Trigger: CTTGTTCAGTTGCCTCTTCCAGAGCATATTGATGAG...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394053.7 |
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| CDS-3UTR TCA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATGAACACCAACCATGTTaGTTTAATGCCTACTATGAC | + |
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Preference number: 4 (lower is better) Translates to: LHSSQGDSWNPCLINNNNEHQPC*FNAYYD Trigger: GTCATAGTAGGCATTAAATCAACATGGTTGGTGTTC...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394053.7 ENST00000677377.1 |
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| 3UTR CAA 72 bp | CCCGAAAGATATAGTCTGATTTCCTATGACAAAGTTTaGGGATACAGTTCAATCACATTAGCCTCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PERYSLISYDKV*GYSSITLASSA Trigger: AGCAGAGGAGGCTAATGTGATTGAACTGTATCCCAAAACTTTGTCATAGGAAATCAGACTATATCTTTCGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678228.1 |
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| CDS CCA 90 bp | GTCTCACTGTTGATTCAGGCCAGTAACCCCACCCAGCCACGCGAGTaGTTTCACAGCCCTTCGAAGGAAAGGCCACCTGCTGCTCAGACC | + |
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Preference number: 5 (lower is better) Translates to: VSLLIQASNPTQPRE*FHSPSKERPPAAQT Trigger: GGTCTGAGCAGCAGGTGGCCTTTCCTTCGAAGGGCTGTGAAACCACTCGCGTGGCTGGGTGGGGTTACTGGCCTGAATCAACAGTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678731.1 |
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| CDS TCA 90 bp | GACCCCACCATATCATCCAAAGCTGACAGACCAGGAGTGAGTATGTaGCGCCAAGGGCAACAATCTCTAGGCTGGCCAGTGGTCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: DPTISSKADRPGVSM*RQGQQSLGWPVVQL Trigger: CAACTGGACCACTGGCCAGCCTAGAGATTGTTGCCCTTGGCGTCACATACTCACTCCTGGTCTGTCAGCTTTGGATGATATGGTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 90 bp | TTGGCAATGTGCTCTTCCCAGGGACCCCACCATATCATCCAAAGCTaGCAGACCAGGAGTGAGTATGTGACGCCAAGGGCAACAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: LAMCSSQGPHHIIQS*QTRSEYVTPRATIS Trigger: AGAGATTGTTGCCCTTGGCGTCACATACTCACTCCTGGTCTGTCAGCTTTGGATGATATGGTGGGGTCCCTGGGAAGAGCACATTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS GCA 90 bp | AATCAGGATCTAGAAGAACCTCCAGTTCCCAAAACCATGTTCAGCTaGCCGAAAGGCTGTCTCTTCCCAAAGAGAACTGCTTATGCAACT | + |
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Preference number: 5 (lower is better) Translates to: NQDLEEPPVPKTMFS*PKGCLFPKRTAYAT Trigger: AGTTGCATAAGCAGTTCTCTTTGGGAAGAGACAGCCTTTCGGGCAGCTGAACATGGTTTTGGGAACTGGAGGTTCTTCTAGATCCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 90 bp | TCTCTTCCCAAAGAGAACTGCTTATGCAACTCTTCCTGGGTTCCATaGAACCCAAATGTGGAAGAGTCCCAGTTTTCCTATTTTCACACA | + |
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Preference number: 5 (lower is better) Translates to: SLPKENCLCNSSWVP*NPNVEESQFSYFHT Trigger: TGTGTGAAAATAGGAAAACTGGGACTCTTCCACATTTGGGTTTCATGGAACCCAGGAAGAGTTGCATAAGCAGTTCTCTTTGGGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 90 bp | AGAAATCATAAATTAGAATGGACTTTGCCTCATATAAACCTCAACTaGACCGCAGTCGAGGTCTCAGAAGGACACATACCCACAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: RNHKLEWTLPHINLN*TAVEVSEGHIPTTA Trigger: TGCAGTTGTGGGTATGTGTCCTTCTGAGACCTCGACTGCGGTTCAGTTGAGGTTTATATGAGGCAAAGTCCATTCTAATTTATGATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488086.1 |
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| CDS CCA 90 bp | AGAACTGCTTATGCAACTCTTCCTGGGTTCCATGAAACCCAAATGTaGAAGAGTCCCAGTTTTCCTATTTTCACACATGTCCTTACAGTA | + |
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Preference number: 5 (lower is better) Translates to: RTAYATLPGFHETQM*KSPSFPIFTHVLTV Trigger: TACTGTAAGGACATGTGTGAAAATAGGAAAACTGGGACTCTTCCACATTTGGGTTTCATGGAACCCAGGAAGAGTTGCATAAGCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS-3UTR CAA 90 bp | CTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTATAAACAATAATAATATAATTGTCTCACTGTaGATTCCCACAACTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LHSSQGDSWNPCLINNNNIIVSL*IPTTAA Trigger: AGCTGCAGTTGTGGGAATCAACAGTGAGACAATTAT...ATTATTATTGTTTATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394053.7 |
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| CDS GCA 90 bp | AAAAAGCCTTTCCCTTTAGATCTCTGTCCTTGGTGTCATGAAGACTaGTCTAACCTCAAGACCAATGAAGTAATCTCCTCTTATATTCTA | + |
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Preference number: 5 (lower is better) Translates to: KKPFPLDLCPWCHED*SNLKTNEVISSYIL Trigger: TAGAATATAAGAGGAGATTACTTCATTGGTCTTGAGGTTAGAGCAGTCTTCATGACACCAAGGACAGAGATCTAAAGGGAAAGGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS GCA 72 bp | GCACTCCAACCTGACCTAGGGAGAGATTCCCCGAACTaGCGCGAGGTGGAAAGGGCGAAGGCGAAGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALQPDLGRDSPN*REVERAKAKGA Trigger: TGCTCCCTTCGCCTTCGCCCTTTCCACCTCGCGGCAGTTCGGGGAATCTCTCCCTAGGTCAGGTTGGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000489041.2 ENST00000678228.1 ENST00000678340.1 ENST00000678955.1 ENST00000679055.1 |
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| CDS GCA 72 bp | GTGGTTTCACAGCCCTTCGAAGGAAAGGCCACCTGCTaGTCAGACCACAGGCCCACAGATGGGCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VVSQPFEGKATC*SDHRPTDGQAE Trigger: CTCTGCCTGCCCATCTGTGGGCCTGTGGTCTGAGCAGCAGGTGGCCTTTCCTTCGAAGGGCTGTGAAACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678731.1 |
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| CDS TCA 72 bp | TCCCAGCACTCTGGGAGGCTGAGGGGGCGGATCACCTaGGGCCTAGTTCGAGACCAGCTTGGTCAATATGGT | + |
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Preference number: 6 (lower is better) Translates to: SQHSGRLRGRIT*GLVRDQLGQYG Trigger: ACCATATTGACCAAGCTGGTCTCGAACTAGGCCTCAGGTGATCCGCCCCCTCAGCCTCCCAGAGTGCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677299.1 |
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| CDS CAA 72 bp | GCAGGGCAGGGGACTGGAGGAAGCTCCTTCTCACAGTaGGCAATGTGCTCTTCCCAGGGACCCCACCATATC | + |
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Preference number: 6 (lower is better) Translates to: AGQGTGGSSFSQ*AMCSSQGPHHI Trigger: GATATGGTGGGGTCCCTGGGAAGAGCACATTGCCAACTGTGAGAAGGAGCTTCCTCCAGTCCCCTGCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | CAGGGCAGGGGACTGGAGGAAGCTCCTTCTCACAGTTaGCAATGTGCTCTTCCCAGGGACCCCACCATATCA | + |
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Preference number: 6 (lower is better) Translates to: QGRGLEEAPSHS*QCALPRDPTIS Trigger: TGATATGGTGGGGTCCCTGGGAAGAGCACATTGCCAACTGTGAGAAGGAGCTTCCTCCAGTCCCCTGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | TTGATTCAGGCCAGTAACCCCACCCAGCCACGCGAGTaGTTTCACAGCCCTTCGAAGGAAAGGCCACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LIQASNPTQPRE*FHSPSKERPPA Trigger: AGCAGGTGGCCTTTCCTTCGAAGGGCTGTGAAACCACTCGCGTGGCTGGGTGGGGTTACTGGCCTGAATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678731.1 |
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| CDS TCA 72 bp | GGAGAATTGCTTGAACCTGGGAGGCCGCAGTTACAGTaGGCCAAGATCGCGCCATTGCATTCCAGCCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: GELLEPGRPQLQ*AKIAPLHSSLG Trigger: GCCTAGGCTGGAATGCAATGGCGCGATCTTGGCTCACTGTAACTGCGGCCTCCCAGGTTCAAGCAATTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000677170.1 ENST00000677997.1 ENST00000678684.1 |
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| CDS TCA 72 bp | TGCTCTTCCCAGGGACCCCACCATATCATCCAAAGCTaGCAGACCAGGAGTGAGTATGTGACGCCAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CSSQGPHHIIQS*QTRSEYVTPRA Trigger: TGCCCTTGGCGTCACATACTCACTCCTGGTCTGTCAGCTTTGGATGATATGGTGGGGTCCCTGGGAAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | GACTTTCCTGGTAAGAATAGGGGCAGGGCAGGGGACTaGAGGAAGCTCCTTCTCACAGTTGGCAATGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DFPGKNRGRAGD*RKLLLTVGNVL Trigger: GAGCACATTGCCAACTGTGAGAAGGAGCTTCCTCCAGTCCCCTGCCCTGCCCCTATTCTTACCAGGAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 72 bp | AAGTTCATGCAATTCTCCAGCTTTTGCCTCCATAGCTaGGAATACAGGCACCCACCACTGCACCCGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KFMQFSSFCLHS*EYRHPPLHPAS Trigger: ACTGGCCGGGTGCAGTGGTGGGTGCCTGTATTCTCAGCTATGGAGGCAAAAGCTGGAGAATTGCATGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS GCA 72 bp | TGCTCTGTTGCCCAGGCTGGAGCAATCTCAGCTCACTaGAGCCTCCCAAGTTCATGCAATTCTCCAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: CSVAQAGAISAH*SLPSSCNSPAF Trigger: AAAAGCTGGAGAATTGCATGAACTTGGGAGGCTGCAGTGAGCTGAGATTGCTCCAGCCTGGGCAACAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 72 bp | ATCCCAACACTTCGGGAAGCCAAGGTAGGCAGATCATaGGGTCAGGAGATTGAGACCATCCTGGCTCATATG | + |
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Preference number: 6 (lower is better) Translates to: IPTLREAKVGRS*GQEIETILAHM Trigger: CATATGAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCTGCCTACCTTGGCTTCCCGAAGTGTTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS TCA 72 bp | ATATCATCCAAAGCTGACAGACCAGGAGTGAGTATGTaGCGCCAAGGGCAACAATCTCTAGGCTGGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ISSKADRPGVSM*RQGQQSLGWPV Trigger: CACTGGCCAGCCTAGAGATTGTTGCCCTTGGCGTCACATACTCACTCCTGGTCTGTCAGCTTTGGATGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS GCA 72 bp | TTTGCCTCCATAGCTGAGAATACAGGCACCCACCACTaGACCCGGCCAGTAACTGCTAATTTAAATGGGATT | + |
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Preference number: 6 (lower is better) Translates to: FASIAENTGTHH*TRPVTANLNGI Trigger: AATCCCATTTAAATTAGCAGTTACTGGCCGGGTGCAGTGGTGGGTGCCTGTATTCTCAGCTATGGAGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | AGGCTACTCTGTAGTCAGAGAACTACAGGCCGTGCCTaGCAACATAGATTGTCATCTGTACCCTTGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: RLLCSQRTTGRA*QHRLSSVPLIP Trigger: AGGAATCAAGGGTACAGATGACAATCTATGTTGCCAGGCACGGCCTGTAGTTCTCTGACTACAGAGTAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677997.1 |
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| CDS TCA 72 bp | AGTCCAAAGGAAAACAAAGTCAGATGGCCTAGAACATaGACCCAATTTTGCCTCATCAGTCAACTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPKENKVRWPRT*TQFCLISQLEL Trigger: CAGCTCCAGTTGACTGATGAGGCAAAATTGGGTTCATGTTCTAGGCCATCTGACTTTGTTTTCCTTTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677299.1 |
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| CDS GCA 72 bp | TTCCCTTTAGATCTCTGTCCTTGGTGTCATGAAGACTaGTCTAACCTCAAGACCAATGAAGTAATCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: FPLDLCPWCHED*SNLKTNEVISS Trigger: AGAGGAGATTACTTCATTGGTCTTGAGGTTAGAGCAGTCTTCATGACACCAAGGACAGAGATCTAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | TATGCAACTCTTCCTGGGTTCCATGAAACCCAAATGTaGAAGAGTCCCAGTTTTCCTATTTTCACACATGTC | + |
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Preference number: 6 (lower is better) Translates to: YATLPGFHETQM*KSPSFPIFTHV Trigger: GACATGTGTGAAAATAGGAAAACTGGGACTCTTCCACATTTGGGTTTCATGGAACCCAGGAAGAGTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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| CDS CCA 72 bp | CTAGAACATGAACCCAATTTTGCCTCATCAGTCAACTaGAGCTGTAACTTGCTACACATAATAAGGGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: LEHEPNFASSVN*SCNLLHIIRAK Trigger: TTTAGCCCTTATTATGTGTAGCAAGTTACAGCTCCAGTTGACTGATGAGGCAAAATTGGGTTCATGTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677299.1 |
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| CDS CAA 72 bp | TTCTTATCTGCTTATATGCCATTTGTAGTTCGTGTTTaGTCCCTGTTGTTAGCAGCCAGGCATGTATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FLSAYMPFVVRV*SLLLAARHVFQ Trigger: TTGAAATACATGCCTGGCTGCTAACAACAGGGACAAAACACGAACTACAAATGGCATATAAGCAGATAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678955.1 |
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