RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTHFD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100714

Ensembl transcript IDs: ENST00000545908.6, ENST00000553405.1, ENST00000554677.1, ENST00000554739.5, ENST00000554768.6, ENST00000555252.5, ENST00000555709.7, ENST00000556284.1, ENST00000556771.5, ENST00000557370.3, ENST00000557539.1, ENST00000650853.1, ENST00000651537.1, ENST00000652179.1, ENST00000652337.1, ENST00000652503.1

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCAGGGAGGTGGGTGAGGCTCTCTGCCATAGAGCTGGGGCTCTaGACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGCGCTATC +
Preference number: 1 (lower is better)
Translates to: EAGRWVRLSAIELGL*TVTPLPYASQGSAI
Trigger: GATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATGGCAGAGAGCCTCACCCACCTCCCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 90 bp CTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATaGAGCATCCTCTGGAAGGATCCAGTGGAGGGAGACAAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: LLCQHQQCLALAPVG*SILWKDPVEGDKGK
Trigger: TTTCCCCTTGTCTCCCTCCACTGGATCCTTCCAGAGGATGCTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 90 bp CCGTTCCCTGGGACACCATTGAATGAACCTGAGGCTCCAAGTCTCTaGTGGTTTCATCTGTTCCTGGGCACCATGAGGGTTGCACAGAGC +
Preference number: 1 (lower is better)
Translates to: PFPGTPLNEPEAPSL*WFHLFLGTMRVAQS
Trigger: GCTCTGTGCAACCCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 90 bp TTCCCTGGGACACCATTGAATGAACCTGAGGCTCCAAGTCTCTGGTaGTTTCATCTGTTCCTGGGCACCATGAGGGTTGCACAGAGCCAA +
Preference number: 1 (lower is better)
Translates to: FPGTPLNEPEAPSLW*FHLFLGTMRVAQSQ
Trigger: TTGGCTCTGTGCAACCCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp CTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATaGGGGTTGCACAGAGCCAACACAAACTCAATAGTAATACTGTTG +
Preference number: 1 (lower is better)
Translates to: LRLQVSGGFICSWAP*GLHRANTNSIVILL
Trigger: CAACAGTATTACTATTGAGTTTGTGTTGGCTCTGTGCAACCCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 90 bp AAAAAGTACCAGAAGCAATTAACTCTGCAAACAGGGCCTGGAGGATaGTGTGCAACAGGAACTGACAAGTGCTTACAATGTGCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: KKYQKQLTLQTGPGG*CATGTDKCLQCARP
Trigger: GGGCCTGGCACATTGTAAGCACTTGTCAGTTCCTGTTGCACAGCATCCTCCAGGCCCTGTTTGCAGAGTTAATTGCTTCTGGTACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 90 bp CACCTACTCACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTaGCAGTATCAGTCGTATGAGAGAGGATGGAGGAGGAGAGAAGCA +
Preference number: 1 (lower is better)
Translates to: HLLTSILKGRRQNNT*QYQSYERGWRRREA
Trigger: TGCTTCTCTCCTCCTCCATCCTCTCTCATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGTGAGTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR GCA 90 bp TCTGGAGGGACTCTTAGCACCAAGGTAAAGGCACTAGACCTTCTCTaGCAGCACATGCTAATAGTTACCCCAAGCACTAATGCTTCTATA +
Preference number: 1 (lower is better)
Translates to: SGGTLSTKVKALDLL*QHMLIVTPSTNASI
Trigger: TATAGAAGCATTAGTGCTTGGGGTAACTATTAGCATGTGCTGGCAGAGAAGGTCTAGTGCCTTTACCTTGGTGCTAAGAGTCCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp TTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATaGCCATCCTTCTTGAGCACTCTAAACATAGACAGTGCTAAAGCT +
Preference number: 1 (lower is better)
Translates to: LLHQQNRGSPKANAA*PSFLSTLNIDSAKA
Trigger: AGCTTTAGCACTGTCTATGTTTAGAGTGCTCAAGAAGGATGGTCATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp AAGGTAAGTCATCAACTTCCAACCCAACCCTCTCAGGAGGTCCCCTaGATTATGTGTCCTCTCAGAAATACACAAGCATGCATACATTTC +
Preference number: 1 (lower is better)
Translates to: KVSHQLPTQPSQEVP*IMCPLRNTQACIHF
Trigger: GAAATGTATGCATGCTTGTGTATTTCTGAGAGGACACATAATTCAGGGGACCTCCTGAGAGGGTTGGGTTGGAAGTTGATGACTTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp TGTTGCAATCTGTTTAATGTGGCAGCACATAAATGCTATCTCTTTTaGATTAAGACTGTGTGTACATCTTCAGTGCACAGAAACAGCCTC +
Preference number: 1 (lower is better)
Translates to: CCNLFNVAAHKCYLF*IKTVCTSSVHRNSL
Trigger: GAGGCTGTTTCTGTGCACTGAAGATGTACACACAGTCTTAATTCAAAAGAGATAGCATTTATGTGCTGCCACATTAAACAGATTGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp TACCTCATGCATGAAAGAAACCTGTCATTCCTGAATTCAGGTAAGTaGCAACGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACT +
Preference number: 1 (lower is better)
Translates to: YLMHERNLSFLNSGK*QRRLFKLLPISLST
Trigger: AGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCGTTGTCACTTACCTGAATTCAGGAATGACAGGTTTCTTTCATGCATGAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 90 bp TTTAATGTATCCAGTACCTCATGCATGAAAGAAACCTGTCATTCCTaGATTCAGGTAAGTGACAACGAAGGCTGTTTAAGCTATTACCCA +
Preference number: 1 (lower is better)
Translates to: FNVSSTSCMKETCHS*IQVSDNEGCLSYYP
Trigger: TGGGTAATAGCTTAAACAGCCTTCGTTGTCACTTACCTGAATTCAGGAATGACAGGTTTCTTTCATGCATGAGGTACTGGATACATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 90 bp ATAAATGCTATCTCTTTTGAATTAAGACTGTGTGTACATCTTCAGTaGACAGAAACAGCCTCTGAAGTGAGATCAGAGAATGTACAATTT +
Preference number: 1 (lower is better)
Translates to: INAISFELRLCVHLQ*TETASEVRSENVQF
Trigger: AAATTGTACATTCTCTGATCTCACTTCAGAGGCTGTTTCTGTGCACTGAAGATGTACACACAGTCTTAATTCAAAAGAGATAGCATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCCCAGACCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDTPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTCTGGGGT...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGACCTGGGGTTATAGGTaGCTGCCACCACACCCAGCT +
Preference number: 2 (lower is better)
Translates to: HRAGALHCDPFAICLSRQTWGYR*LPPHPA
Trigger: AGCTGGGTGTGGTGGCAGGCACCTATAACCCCAGGT...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTGGAGTGCAGCAGCATaGTCCTGGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRWSAAA*SWLTAT
Trigger: GGTTGCAGTGAGCCAGGATCATGCTGCTGCACTCCA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CAA 90 bp GTGAGGCTCTCTGCCATAGAGCTGGGGCTCTGCACTGTGACCCCTTaGCCATATGCCTCTCAAGGCAGCGCTATCATTTCTGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: VRLSAIELGLCTVTP*PYASQGSAIISVDC
Trigger: ACAGTCCACAGAAATGATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATGGCAGAGAGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGGGTCTGCCTGACAAATaGGCTCACAAAGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: HRAGALHCDPFAICLSRQGLPDK*AHKGWQ
Trigger: CTGCCATCCTTTGTGAGCTCATTTGTCAGGCAGACC...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGATGATCCTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRMILAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAGGATCAT...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACGGATGCAGCATCCTCTaGAAGGATCCAGTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDGCSIL*KDPVEG
Trigger: TCCCTCCACTGGATCCTTCCAGAGGATGCTGCATCC...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CAA 90 bp GGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATaGAATGAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTC +
Preference number: 2 (lower is better)
Translates to: GLLGISPPTPFPGTP*NEPEAPSLWWFHLF
Trigger: GAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGGAGGTTGCAGTGAGCTaGGATCACGTCACTACACTG +
Preference number: 2 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMREVAVS*DHVTTL
Trigger: CAGTGTAGTGACGTGATCTCAGCTCACTGCAACCTC...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGTCTCCCAGGCTGGAGTaGAGCAGCATGATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: NTALPTSAVFSTGASGMQSPRLE*SSMILA
Trigger: AGCCAGGATCATGCTGCTGCACTCCAGCCTGGGAGA...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACGGGCACCATGAGGGTTaGACAGAGCCAACACAAACT +
Preference number: 2 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDGHHEG*TEPTQT
Trigger: AGTTTGTGTTGGCTCTGTGCAACCCTCATGGTGCCC...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAATCTGGAAGGATCCAGTaGAGGGAGACAAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIESGRIQ*RETRGK
Trigger: TTTTCCCCTTGTCTCCCTCCACTGGATCCTTCCAGA...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAAAGGCTAATGCTGCATaGCCATCCTTCTTGAGCACT +
Preference number: 2 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEKANAA*PSFLST
Trigger: AGTGCTCAAGAAGGATGGTCATGCAGCATTAGCCTT...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACAGGAACTGACAAGTaGTTACAATGTGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDTGTDK*LQCARP
Trigger: GGGCCTGGCACATTGTAAGCACTTGTCAGTTCCTGT...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACGAGGCTCCAAGTCTCTaGTGGTTTCATCTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDEAPSL*WFHLFL
Trigger: CAGGAACAGATGAAACCACCAGAGACTTGGAGCCTC...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRRRRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGGTGGGTGAGGCTCTCTaGCATAGAGCTGGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRVGEAL*HRAGAL
Trigger: CAGAGCCCCAGCTCTATGGCAGAGAGCCTCACCCAC...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGCACTGGGAAAAATACTaGTTTGCCAACATCAGCAGT +
Preference number: 2 (lower is better)
Translates to: HRAGALHCDPFAICLSRQHWEKY*FANISS
Trigger: ACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTG...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGGCACTAGACCTTCTCTaGCAGCACATGCTAATAGTT +
Preference number: 2 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRALDLL*QHMLIV
Trigger: AACTATTAGCATGTGCTGGCAGAGAAGGTCTAGTGC...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGAGCCTCCCAAGTACCTaGGGTTATAGGTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRSLPST*GYRCLP
Trigger: TGGCAGGCACCTATAACCCCAGGTACTTGGGAGGCT...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CAA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTaGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCG +
Preference number: 2 (lower is better)
Translates to: RRREAARSSASELIS*ERDKLLPSVCDPSP
Trigger: CGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGTTAGAAGAAACTCAATaGATACTTGCTGCACCAACA +
Preference number: 2 (lower is better)
Translates to: HRAGALHCDPFAICLSRQLEETQ*ILAAPT
Trigger: TGTTGGTGCAGCAAGTATTCATTGAGTTTCTTCTAA...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGGGCTGTAATTCATATTaGAACACCAAGATGGCAAAC +
Preference number: 2 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRGCNSY*NTKMAN
Trigger: GTTTGCCATCTTGGTGTTGCAATATGAATTACAGCC...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTGTTACCGTCCGTGTGTaGCCCTTCTCCGTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: EAILINFYARIFTWGSPPVTVRV*PFSVGA
Trigger: GGCTCCAACGGAGAAGGGTCACACACGGACGGTAAC...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTGGGGCTCTGCACTGTaGCCCCTTTGCCATATGCCT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAWGSAL*PLCHMP
Trigger: AGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCA...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAATTGCAACACCAAGATaGCAAACTTGTTTCCTTTTA +
Preference number: 2 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEIATPR*QTCFLL
Trigger: TAAAAGGAAACAAGTTTGCCATCTTGGTGTTGCAAT...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGGCAGGAGAATCACTTaGACCCAGGAGACGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAGRRIT*TQETEV
Trigger: AACCTCCGTCTCCTGGGTTCAAGTGATTCTCCTGCC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTTCTGGGCAGGGGCTaGCTTCTCTTGGCTTACTTA +
Preference number: 2 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTLLGRG*LLLAYL
Trigger: TAAGTAAGCCAAGAGAAGTCAGCCCCTGCCCAGAAG...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
3UTR-3UTR TCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTACACTGTCAACCTGTaGCAAGCCATGCTGCGCTTC +
Preference number: 2 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSYTVNL*QAMLRF
Trigger: GAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTA...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
3UTR-3UTR TCA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATCTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 2 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYLLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp TTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTCCAGGAAAGCAGTATCAGTCGTATaGGAGAGGATGGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: FNQFLCKDIHLGLSTSRKAVSVV*ERMEEE
Trigger: CTCCTCCTCCATCCTCTCTCATACGACTGATACTGC...TTTCCTGGAGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATTTTCTTCTGGGCAGTaGACTCTGCTCACTTGGCAT +
Preference number: 2 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQFSSGQ*TLLTWH
Trigger: ATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAAA...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
3UTR-3UTR TCA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAGCCCAAGGGTCTGCCTaGCAAATGAGCTCACAAAGG +
Preference number: 2 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLAQGSA*QMSSQR
Trigger: CCTTTGTGAGCTCATTTGTCAGGCAGACCCTTGGGC...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAGGCAGAGGTTGCAGTaGGCTGAGATCACGTCACTA +
Preference number: 2 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHRQRLQ*AEITSL
Trigger: TAGTGACGTGATCTCAGCTCACTGCAACCTCTGCCT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGACCCCTTTGCCATATaGCTCTCAAGGCAGCGCTAT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVADPFAI*LSRQRY
Trigger: ATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAGGTGTGAGCTACCATaGCCAGCCCCTACCAGTATT +
Preference number: 2 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHRCELP*PAPTSI
Trigger: AATACTGGTAGGGGCTGGGCATGGTAGCTCACACCT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTGCTCAGGCTGGAATaGGGTGGCTCAGTCATAGCT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVALLRLE*GGSVIA
Trigger: AGCTATGACTGAGCCACCGCATTCCAGCCTGAGCAA...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAACACTTGGCATTTGCTTaGTGGTTTCGGCAACACACT +
Preference number: 2 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSEHLAFA*WFRQHT
Trigger: AGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTG...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
3UTR-3UTR GCA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 2 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR GCA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATCTCTCTACTGTGCTCTaGATGAGCATTGCAACTGTC +
Preference number: 2 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYLSTVL*MSIATV
Trigger: GACAGTTGCAATGCTCATGCAGAGCACAGTAGAGAG...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR GCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGTATCCAACACTCTTTaGCAAGTTATGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLVSNTL*QVMVSG
Trigger: TCCAGAAACCATAACTTGGCAAAGAGTGTTGGATAC...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTACAGGGCCTGGAGGATaGTGTGCAACAGGAACTGAC +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFTGPGG*CATGTD
Trigger: GTCAGTTCCTGTTGCACAGCATCCTCCAGGCCCTGT...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGTTTAACCTTCGGATTTaGATGTCAGAGAACCTTCTC +
Preference number: 2 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLFNLRI*MSENLL
Trigger: GAGAAGGTTCTCTGACATCCAAATCCGAAGGTTAAA...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR CCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTCTGCAAACAGGGCCTaGAGGATGCTGTGCAACAGG +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFSANRA*RMLCNR
Trigger: CCTGTTGCACAGCATCCTCCAGGCCCTGTTTGCAGA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTCTCTGTTGCTCAGGCTaGAATGCGGTGGCTCAGTCA +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFLCCSG*NAVAQS
Trigger: TGACTGAGCCACCGCATTCCAGCCTGAGCAACAGAG...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTACCTGTGACAAGCCATaGTGCGCTTCTTCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSTCDKP*CASSKN
Trigger: ATTTTTGGAAGAAGCGCAGCATGGCTTGTCACAGGT...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
3UTR-3UTR TCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTCTCAGGAGGTCCCCTaGATTATGTGTCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFSQEVP*IMCPLR
Trigger: TCTGAGAGGACACATAATTCAGGGGACCTCCTGAGA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTAAGTCACCATATCTaGCAAGACTGCATCCTTCCC +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVALSHHI*QDCILP
Trigger: GGGAAGGATGCAGTCTTGTCAGATATGGTGACTTAA...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTCACAGAAACAGCCTCTaGAGTGAGATCAGAGAATGT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAHRNSL*SEIREC
Trigger: ACATTCTCTGATCTCACTTCAGAGGCTGTTTCTGTG...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTAAAAGCTGTCAGGAGTaGTCAATGCCACACACCTAC +
Preference number: 2 (lower is better)
Translates to: EAILINFYARIFTWGSPPKSCQE*SMPHTY
Trigger: GTAGGTGTGTGGCATTGAGCACTCCTGACAGCTTTT...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTTCAGCCCAAGGGTCTaGCTGACAAATGAGCTCACA +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFFSPRV*LTNELT
Trigger: TGTGAGCTCATTTGTCAGGCAGACCCTTGGGCTGAA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTCTCTACCCATTGCCTaGGCCTATAGCTACCAAAAA +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVASLPIA*AYSYQK
Trigger: TTTTTGGTAGCTATAGGCCCAGGCAATGGGTAGAGA...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTCCCTTGTCTACAAAATaGATTCCCAGCAAATCCCAT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAPLSTK*IPSKSH
Trigger: ATGGGATTTGCTGGGAATTCATTTTGTAGACAAGGG...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTGGAAAAACACACAGGTaGCACATGGGATTTATTGCA +
Preference number: 2 (lower is better)
Translates to: EAILINFYARIFTWGSPPGKTHR*HMGFIA
Trigger: TGCAATAAATCCCATGTGTCACCTGTGTGTTTTTCC...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTAAACAGCCTCTGAAGTaGGATCAGAGAATGTACAAT +
Preference number: 2 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAKQPLK*DQRMYN
Trigger: ATTGTACATTCTCTGATCTCACTTCAGAGGCTGTTT...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CCA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATTATATCAATGTCACTTaGAACAGGTGTCTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYYINVT*NRCLEV
Trigger: AACCTCAAGACACCTGTTCCAAGTGACATTGATATA...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR TCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTACAGTGCTAAAGCTGTaGCAGAAATGGGAATTCCAA +
Preference number: 2 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFTVLKL*QKWEFQ
Trigger: TTGGAATTCCCATTTCTGTCACAGCTTTAGCACTGT...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR TCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATACTGTATTACAACATTaGCATGGACCTAGGGAATTA +
Preference number: 2 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHTVLQH*HGPREL
Trigger: TAATTCCCTAGGTCCATGTCAATGTTGTAATACAGT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR GCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTGGTCAGTCTTTTCAATaGCTAGTCTCTTTAACCTTC +
Preference number: 2 (lower is better)
Translates to: EAILINFYARIFTWGSPPGQSFQ*LVSLTF
Trigger: GAAGGTTAAAGAGACTAGGCATTGAAAAGACTGACC...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR GCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTCAATTCATTGGTTATTaGCAACTCTCATTACTATCC +
Preference number: 2 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSQFIGY*QLSLLS
Trigger: GGATAGTAATGAGAGTTGGCAATAACCAATGAATTG...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
3UTR GCA 72 bp AGGTGGGTGAGGCTCTCTGCCATAGAGCTGGGGCTCTaGACTGTGACCCCTTTGCCATATGCCTCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: RWVRLSAIELGL*TVTPLPYASQG
Trigger: GCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATGGCAGAGAGCCTCACCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp CAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATaGAGCATCCTCTGGAAGGATCCAGTGGAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: QHQQCLALAPVG*SILWKDPVEGD
Trigger: GTCTCCCTCCACTGGATCCTTCCAGAGGATGCTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACTTGGCCAAGCTGGTCTaGAACCCCAGACCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDLAKLV*NPRPQV
Trigger: CACTTGAGGTCTGGGGTTCAAGACCAGCTTGGCCAA...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp AGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATaGCTCTCAAGGCAGCGCTATCATTTCTGTGGACTG +
Preference number: 3 (lower is better)
Translates to: RAGALHCDPFAI*LSRQRYHFCGL
Trigger: CAGTCCACAGAAATGATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp ATTCCAGAACCGCCCTCACGAGGTAGGTACCAACAGTaGTCCTATTTCCATGGTGAGGATGTGGAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: IPEPPSRGRYQQ*SYFHGEDVEAG
Trigger: CCCTGCCTCCACATCCTCACCATGGAAATAGGAGCACTGTTGGTACCTACCTCGTGAGGGCGGTTCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 72 bp TGTTTAGCACTGGCGCCAGTGGGATGCAGCATCCTCTaGAAGGATCCAGTGGAGGGAGACAAGGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: CLALAPVGCSIL*KDPVEGDKGKK
Trigger: CTTTTTCCCCTTGTCTCCCTCCACTGGATCCTTCCAGAGGATGCTGCATCCCACTGGCGCCAGTGCTAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACCAGGGTTTTACCATGTaGGCCAAGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDQGFTM*AKLVLN
Trigger: GTTCAAGACCAGCTTGGCCAACATGGTAAAACCCTG...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 72 bp GGGACACCATTGAATGAACCTGAGGCTCCAAGTCTCTaGTGGTTTCATCTGTTCCTGGGCACCATGAGGGTT +
Preference number: 3 (lower is better)
Translates to: GTPLNEPEAPSL*WFHLFLGTMRV
Trigger: AACCCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTCATTCAATGGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSRLKRA*SVWVSS
Trigger: TGAACTGACCCAGACAGACAAGGCTCTCTTTAATCG...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR CAA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR TCA 72 bp CAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATaGGGGTTGCACAGAGCCAACACAAACTCAATAGTA +
Preference number: 3 (lower is better)
Translates to: QVSGGFICSWAP*GLHRANTNSIV
Trigger: TACTATTGAGTTTGTGTTGGCTCTGTGCAACCCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp TTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTCCAGGAAAAAGCTCGCCCTCTCTTaGGCCTCGTCGTATGCCACA +
Preference number: 3 (lower is better)
Translates to: FNQFLCKDIHLGLSTSRKKLALS*ASSYAT
Trigger: TGTGGCATACGACGAGGCCAAAGAGAGGGCGAGCTT...TTTCCTGGAGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR CAA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGAGTTCAGGCAAAAACTaGTATAAGCAATACTTCCTC +
Preference number: 3 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRSSGKN*YKQYFL
Trigger: GAGGAAGTATTGCTTATACAAGTTTTTGCCTGAACT...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGAAACTCAATGAATACTaGCTGCACCAACAGAATAGA +
Preference number: 3 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRKLNEY*LHQQNR
Trigger: TCTATTCTGTTGGTGCAGCAAGTATTCATTGAGTTT...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAACTGCTCACTTGGCATTaGCTTGATGGTTTCGGCAAC +
Preference number: 3 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQLLTWH*LDGFGN
Trigger: GTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAG...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
3UTR GCA 72 bp CAGAAGCAATTAACTCTGCAAACAGGGCCTGGAGGATaGTGTGCAACAGGAACTGACAAGTGCTTACAATGT +
Preference number: 3 (lower is better)
Translates to: QKQLTLQTGPGG*CATGTDKCLQC
Trigger: ACATTGTAAGCACTTGTCAGTTCCTGTTGCACAGCATCCTCCAGGCCCTGTTTGCAGAGTTAATTGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CCA 72 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTaGCAGTATCAGTCGTATGAGAGAGGATGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TSILKGRRQNNT*QYQSYERGWRR
Trigger: CCTCCTCCATCCTCTCTCATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
3UTR-3UTR CAA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATTTCCCTGGGACACCATaGAATGAACCTGAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHFPGTP*NEPEAP
Trigger: TGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAA...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp ACTCTTAGCACCAAGGTAAAGGCACTAGACCTTCTCTaGCAGCACATGCTAATAGTTACCCCAAGCACTAAT +
Preference number: 3 (lower is better)
Translates to: TLSTKVKALDLL*QHMLIVTPSTN
Trigger: ATTAGTGCTTGGGGTAACTATTAGCATGTGCTGGCAGAGAAGGTCTAGTGCCTTTACCTTGGTGCTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTGCACTGTGACCCCTTaGCCATATGCCTCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFCTVTP*PYASQG
Trigger: GCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 72 bp CAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATaGCCATCCTTCTTGAGCACTCTAAACATAGACAGT +
Preference number: 3 (lower is better)
Translates to: QQNRGSPKANAA*PSFLSTLNIDS
Trigger: ACTGTCTATGTTTAGAGTGCTCAAGAAGGATGGTCATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp ATAATAAAACCAAGGTCACTGGGAAAAATACTGCTTTaGCAACATCAGCAGTGTTTAGCACTGGCGCCAGTG +
Preference number: 3 (lower is better)
Translates to: IIKPRSLGKILL*QHQQCLALAPV
Trigger: CACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 72 bp TCCAGTACCTCATGCATGAAAGAAACCTGTCATTCCTaGATTCAGGTAAGTGACAACGAAGGCTGTTTAAGC +
Preference number: 3 (lower is better)
Translates to: SSTSCMKETCHS*IQVSDNEGCLS
Trigger: GCTTAAACAGCCTTCGTTGTCACTTACCTGAATTCAGGAATGACAGGTTTCTTTCATGCATGAGGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAAACCCATGTGGCTGTaGGCGATATTAGGAAACCTA +
Preference number: 3 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHKPMWL*AILGNL
Trigger: TAGGTTTCCTAATATCGCCAACAGCCACATGGGTTT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR-3UTR CAA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTACCATTTATCCCATCTaGATCTCTACCCATTGCCTG +
Preference number: 3 (lower is better)
Translates to: RRLFKLLPISLSTTPLVATIYPI*ISTHCL
Trigger: CAGGCAATGGGTAGAGATCAAGATGGGATAAATGGT...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 72 bp ACTGTGTGTACATCTTCAGTGCACAGAAACAGCCTCTaGAGTGAGATCAGAGAATGTACAATTTGTTTATCA +
Preference number: 3 (lower is better)
Translates to: TVCTSSVHRNSL*SEIRECTICLS
Trigger: TGATAAACAAATTGTACATTCTCTGATCTCACTTCAGAGGCTGTTTCTGTGCACTGAAGATGTACACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR TCA 72 bp CATGAAAGAAACCTGTCATTCCTGAATTCAGGTAAGTaGCAACGAAGGCTGTTTAAGCTATTACCCATATCA +
Preference number: 3 (lower is better)
Translates to: HERNLSFLNSGK*QRRLFKLLPIS
Trigger: TGATATGGGTAATAGCTTAAACAGCCTTCGTTGTCACTTACCTGAATTCAGGAATGACAGGTTTCTTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR GCA 72 bp ATCTCTTTTGAATTAAGACTGTGTGTACATCTTCAGTaGACAGAAACAGCCTCTGAAGTGAGATCAGAGAAT +
Preference number: 3 (lower is better)
Translates to: ISFELRLCVHLQ*TETASEVRSEN
Trigger: ATTCTCTGATCTCACTTCAGAGGCTGTTTCTGTGCACTGAAGATGTACACACAGTCTTAATTCAAAAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGTGGGCCGTCCGTGTGTaGCCCTTCTCCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: HRAGALHCDPFAICLSRQWAVRV*PFSVGA
Trigger: GGCTCCAACGGAGAAGGGTCACACACGGACGGCCCA...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTGGGCCGTCCGTGTGTaGCCCTTCTCCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASWAVRV*PFSVGA
Trigger: GGCTCCAACGGAGAAGGGTCACACACGGACGGCCCA...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTGTTCCTGGGCACCATaGGGGTTGCACAGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRCSWAP*GLHRAN
Trigger: GTTGGCTCTGTGCAACCCTCATGGTGCCCAGGAACA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAAGAGCCAGTTCACAGTaGGCCTTTGTATTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIERASSQ*AFVFGG
Trigger: CCCGCCGAATACAAAGGCGCACTGTGAACTGGCTCT...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATCTGCGCCTGCGCCCCTaGCCGCTTCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHLRLRP*PLLPLQ
Trigger: CTGCAGGGGGAGAAGCGGGCAGGGGCGCAGGCGCAG...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGCTTCTGGGCAGGGGCTaGCTTCTCTTGGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: HRAGALHCDPFAICLSRQLLGRG*LLLAYL
Trigger: TAAGTAAGCCAAGAGAAGTCAGCCCCTGCCCAGAAG...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGGGCAGGAGAATCACTTaGACCCAGGAGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRGRRIT*TQETEV
Trigger: AACCTCCGTCTCCTGGGTTCAAGTGATTCTCCTGCC...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACCTCCTATTTCCATGGTaGGGATGTGGAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDLLFPW*GCGGRE
Trigger: CTCCCTGCCTCCACATCCTCACCATGGAAATAGGAG...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACAGGGCCTGGAGGATaGTGTGCAACAGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDTGPGG*CATGTD
Trigger: GTCAGTTCCTGTTGCACAGCATCCTCCAGGCCCTGT...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGCACGTGCTTAGGGACTaGCCAGGGGATCACACTACT +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRHVLRD*PGDHTT
Trigger: AGTAGTGTGATCCCCTGGCCAGTCCCTAAGCACGTG...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAACTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIELLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGAGGCAGAGGTTGCAGTaGGCTGAGATCACGTCACTA +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRRQRLQ*AEITSL
Trigger: TAGTGACGTGATCTCAGCTCACTGCAACCTCTGCCT...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGACCTGGGGTTATAGGTaGCTGCCACCACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQTWGYR*LPPHPA
Trigger: AGCTGGGTGTGGTGGCAGGCACCTATAACCCCAGGT...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CAA 72 bp TCTGCCATAGAGCTGGGGCTCTGCACTGTGACCCCTTaGCCATATGCCTCTCAAGGCAGCGCTATCATTTCT +
Preference number: 4 (lower is better)
Translates to: SAIELGLCTVTP*PYASQGSAIIS
Trigger: AGAAATGATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
3UTR CAA 72 bp GGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATaGAATGAACCTGAGGCTCCAAGTCTCTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GISPPTPFPGTP*NEPEAPSLWWF
Trigger: AAACCACCAGAGACTTGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGACTCTGTATCCGTCTTaGATGCATTCACGGCCACTA +
Preference number: 4 (lower is better)
Translates to: HRAGALHCDPFAICLSRQTLYPS*MHSRPL
Trigger: TAGTGGCCGTGAATGCATTCAAGACGGATACAGAGT...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTCTCAGGAGGTCCCCTaGATTATGTGTCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRSQEVP*IMCPLR
Trigger: TCTGAGAGGACACATAATTCAGGGGACCTCCTGAGA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGAAGGCTAATGCTGCATaGCCATCCTTCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: HRAGALHCDPFAICLSRQKANAA*PSFLST
Trigger: AGTGCTCAAGAAGGATGGTCATGCAGCATTAGCCTT...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATACCCCAGACCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHTPDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTCTGGGGT...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATGTGGGGCCGCCCCCGTaGATCTTGAGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHVGPPP*ILRALT
Trigger: TGTCAGGGCTCTCAAGATGCACGGGGGCGGCCCCAC...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATGCCCGCTTCTCCCCCTaGAGACGCGGTGGCGCATGC +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHARFSP*RRGGAC
Trigger: GCATGCGCCACCGCGTCTGCAGGGGGAGAAGCGGGC...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATTCACACTACTGCGCCTaGGCCCCTGCCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHSHYCA*APARFS
Trigger: GGAGAAGCGGGCAGGGGCGCAGGCGCAGTAGTGTGA...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAACAAGTGCTTACAATGTaGCAGGCCCTGTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEQVLTM*QALYKA
Trigger: TGCTTTGTACAGGGCCTGGCACATTGTAAGCACTTG...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGAACCAGCCCCAACGCTaGCGCGGATGTCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRNQPQR*RGCREW
Trigger: CCATTCGCGACATCCGCGCCAGCGTTGGGGCTGGTT...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTCTGGAAGGATCCAGTaGAGGGAGACAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRSGRIQ*RETRGK
Trigger: TTTTCCCCTTGTCTCCCTCCACTGGATCCTTCCAGA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGCTCTGTTGCTCAGGCTaGAATGCGGTGGCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQLCCSG*NAVAQS
Trigger: TGACTGAGCCACCGCATTCCAGCCTGAGCAACAGAG...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTCAAACTAGCTGGACATaGTGGCGGACGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAQTSWT*WRTPVI
Trigger: GATTACAGGCGTCCGCCACCATGTCCAGCTAGTTTG...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR TCA 90 bp CCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATCATGGGCCGTCCGTGTGTaGCCCTTCTCCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQQELYSSCFIAYDPQQSWAVRV*PFSVGA
Trigger: GGCTCCAACGGAGAAGGGTCACACACGGACGGCCCA...TGATTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR TCA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTGGGCCGTCCGTGTGTaGCCCTTCTCCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFWAVRV*PFSVGA
Trigger: GGCTCCAACGGAGAAGGGTCACACACGGACGGCCCA...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTCTTCTGGGCAGGGGCTaGCTTCTCTTGGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLLLGRG*LLLAYL
Trigger: TAAGTAAGCCAAGAGAAGTCAGCCCCTGCCCAGAAG...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACCCATTTATCCCATCTTaGTCTCTACCCATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDPFIPS*SLPIAW
Trigger: CCAGGCAATGGGTAGAGATCAAGATGGGATAAATGG...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTACACTGTCAACCTGTaGCAAGCCATGCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASYTVNL*QAMLRF
Trigger: GAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTA...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp CACCAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATGTGGGGCCGCCCCCGTaGATCTTGAGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: HQDGPQQELYSSCFIAYDVGPPP*ILRALT
Trigger: TGTCAGGGCTCTCAAGATGCACGGGGGCGGCCCCAC...ATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTTGGAAAGGACAACCCAACCCACGTaGTTAGGGACTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRREAARSSASELISLERTTQPT*LGTGQG
Trigger: CCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGT...CCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CCA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGAAAATCGGTGATGAATaGCTGGCGGAAATGATTGGC +
Preference number: 4 (lower is better)
Translates to: HRAGALHCDPFAICLSRQKIGDE*LAEMIG
Trigger: GCCAATCATTTCCGCCAGCCATTCATCACCGATTTT...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAAAACCAGCCCCAACGCTaGCGCGGATGTCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQNQPQR*RGCREW
Trigger: CCATTCGCGACATCCGCGCCAGCGTTGGGGCTGGTT...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGCACAGAAACAGCCTCTaGAGTGAGATCAGAGAATGT +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRHRNSL*SEIREC
Trigger: ACATTCTCTGATCTCACTTCAGAGGCTGTTTCTGTG...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCCTCTCTACTGTGCTCTaGATGAGCATTGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSLSTVL*MSIATV
Trigger: GACAGTTGCAATGCTCATGCAGAGCACAGTAGAGAG...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAGACGCGGTGGCGCATaGGCAGTTCGGAAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHRRGGA*AVRKDP
Trigger: CGGGTCCTTCCGAACTGCGCATGCGCCACCGCGTCT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTGGAGTCCAGGCATTGTaGTCATCGTTCCTACTAAGG +
Preference number: 4 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLGVQAL*SSFLLR
Trigger: CCTTAGTAGGAACGATGAGCACAATGCCTGGACTCC...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATGGCCGAAGAGGGAGCTaGAAAGGACTCCGGAATCCG +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHGRRGS*KGLRNP
Trigger: CGGATTCCGGAGTCCTTTCCAGCTCCCTCTTCGGCC...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTCCCCTGCAGACGCGGTaGCGCATGCGCAGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAPLQTR*RMRSSE
Trigger: TTCCGAACTGCGCATGCGCCACCGCGTCTGCAGGGG...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTAACCAGCCCCAACGCTaGCGCGGATGTCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSNQPQR*RGCREW
Trigger: CCATTCGCGACATCCGCGCCAGCGTTGGGGCTGGTT...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACAAACCAGCCCCAACGCTaGCGCGGATGTCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTNQPQR*RGCREW
Trigger: CCATTCGCGACATCCGCGCCAGCGTTGGGGCTGGTT...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTCTCTACCCATTGCCTaGGCCTATAGCTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRSLPIA*AYSYQK
Trigger: TTTTTGGTAGCTATAGGCCCAGGCAATGGGTAGAGA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCAACACACACTCTGTATCCGTCTTaGATGCATTCACGGCCACTA +
Preference number: 4 (lower is better)
Translates to: LGSELCSLGICLMVSATHTLYPS*MHSRPL
Trigger: TAGTGGCCGTGAATGCATTCAAGACGGATACAGAGT...GTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTAGGGGATCACACTACTaGGCCTGCGCCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFRGSHY*ACAPAR
Trigger: GCGGGCAGGGGCGCAGGCGCAGTAGTGTGATCCCCT...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACAACAACCCAACCCACGTaGTTAGGGACTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTTTQPT*LGTGQG
Trigger: CCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGT...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR GCA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTTGGAAAGGAGTCTCGCCCTTATTTaGGCGGAGATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RRREAARSSASELISLERSLALI*AEISFP
Trigger: CGGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACT...CCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGATGATCCTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRMILAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAGGATCAT...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGGGATGCAGCATCCTCTaGAAGGATCCAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRGCSIL*KDPVEG
Trigger: TCCCTCCACTGGATCCTTCCAGAGGATGCTGCATCC...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACCTTCTGGGCAGGGGCTaGCTTCTCTTGGCTTACTTA +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDLLGRG*LLLAYL
Trigger: TAAGTAAGCCAAGAGAAGTCAGCCCCTGCCCAGAAG...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGGGTCTGCCTGACAAATaGGCTCACAAAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRGLPDK*AHKGWQ
Trigger: CTGCCATCCTTTGTGAGCTCATTTGTCAGGCAGACC...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATGCCCAAGGGTCTGCCTaGCAAATGAGCTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHAQGSA*QMSSQR
Trigger: CCTTTGTGAGCTCATTTGTCAGGCAGACCCTTGGGC...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGTTAAGTCACCATATCTaGCAAGACTGCATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQLSHHI*QDCILP
Trigger: GGGAAGGATGCAGTCTTGTCAGATATGGTGACTTAA...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGAAACAGCCTCTGAAGTaGGATCAGAGAATGTACAAT +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRKQPLK*DQRMYN
Trigger: ATTGTACATTCTCTGATCTCACTTCAGAGGCTGTTT...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGCCAGTACCTCATGCATaGAAGAAACCTGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQPVPHA*KKPVIP
Trigger: AGGAATGACAGGTTTCTTTCATGCATGAGGTACTGG...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTCTCAGGAGGCTGATATaGGAGAATTGCTTGTATGCA +
Preference number: 4 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASLRRLI*ENCLYA
Trigger: TGCATACAAGCAATTCTCTCATATCAGCCTCCTGAG...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR TCA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTAGGTACTCAGGAGGCTaGTATGAGAGAATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLRYSGG*YERIAC
Trigger: ACAAGCAATTCTCTCATATCAGCCTCCTGAGTACCT...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR TCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACTACACTGTCAACCTGTaGCAAGCCATGCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDYTVNL*QAMLRF
Trigger: GAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTA...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTGTGGGGCCGCCCCCGTaGATCTTGAGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPVGPPP*ILRALT
Trigger: TGTCAGGGCTCTCAAGATGCACGGGGGCGGCCCCAC...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTACAACCCAACCCACGTaGTTAGGGACTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVATTQPT*LGTGQG
Trigger: CCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGT...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGTCAGGAGTGCTCAATaGCACACACCTACTCACTTC +
Preference number: 4 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLVRSAQ*HTPTHF
Trigger: GAAGTGAGTAGGTGTGTGGCATTGAGCACTCCTGAC...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCACACATGGGATTTATTaGAAAAGCTGTCAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSTHGIY*KSCQEC
Trigger: GCACTCCTGACAGCTTTTGCAATAAATCCCATGTGT...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAACGCCCACTACTCCCTTaGAGCATGCACTTACCGTTC +
Preference number: 4 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQRPLLP*SMHLPF
Trigger: GAACGGTAAGTGCATGCTGCAAGGGAGTAGTGGGCG...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAAGACGAGAAGTGCAGATaGGCCCACTACTCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQDEKCR*AHYSLA
Trigger: TGCAAGGGAGTAGTGGGCGCATCTGCACTTCTCGTC...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CCA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGTTTAACCTTCGGATTTaGATGTCAGAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRFNLRI*MSENLL
Trigger: GAGAAGGTTCTCTGACATCCAAATCCGAAGGTTAAA...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGCACTACACTGCAGCCTaGGCAAAAGAGCACGACTCT +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRHYTAA*AKEHDS
Trigger: AGAGTCGTGCTCTTTTGCCCAGGCTGCAGTGTAGTG...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGAAAATTAGCCAGGCATaGTGGTGCGAACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQKISQA*WCEPVI
Trigger: GATTACAGGTTCGCACCACCATGCCTGGCTAATTTT...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCCACACAGGTGACACATaGGATTTATTGCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSHTGDT*DLLQKL
Trigger: CAGCTTTTGCAATAAATCCCATGTGTCACCTGTGTG...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR TCA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTTGGAAAGGCTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: RRREAARSSASELISLERLLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...CCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR TCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACCTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDLLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATTGGAGTGCAGCAGCATaGTCCTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHWSAAA*SWLTAT
Trigger: GGTTGCAGTGAGCCAGGATCATGCTGCTGCACTCCA...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGCCCTTGTCTACAAAATaGATTCCCAGCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQPLSTK*IPSKSH
Trigger: ATGGGATTTGCTGGGAATTCATTTTGTAGACAAGGG...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CACCAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATAGTCTCGCCCTTATTTaGGCGGAGATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HQDGPQQELYSSCFIAYDSLALI*AEISFP
Trigger: CGGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACT...ATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTAGTCTCGCCCTTATTTaGGCGGAGATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSSLALI*AEISFP
Trigger: CGGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACT...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651537.1
CDS-3UTR GCA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTGGTCAGTCTTTTCAATaGCTAGTCTCTTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAGQSFQ*LVSLTF
Trigger: GAAGGTTAAAGAGACTAGGCATTGAAAAGACTGACC...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACAACTCAATGAATACTTaGTGCACCAACAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDNSMNT*CTNRIE
Trigger: CTCTATTCTGTTGGTGCAGCAAGTATTCATTGAGTT...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGAAAAGCTGTCAGGAGTaGTCAATGCCACACACCTAC +
Preference number: 4 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLKSCQE*SMPHTY
Trigger: GTAGGTGTGTGGCATTGAGCACTCCTGACAGCTTTT...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTAGAGGTCAAGTGGAATaGAGAATATTCTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASRGQVE*RIFSGL
Trigger: GAGTCCTGAGAATATTCTGCATTCCACTTGACCTCT...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR CCA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTTTAACCTTCGGATTTaGATGTCAGAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAFNLRI*MSENLL
Trigger: GAGAAGGTTCTCTGACATCCAAATCCGAAGGTTAAA...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGGGATTTAAACCCATGTaGCTGTTGGCGATATTAGGA +
Preference number: 4 (lower is better)
Translates to: NTALPTSAVFSTGASGMQGFKPM*LLAILG
Trigger: TCCTAATATCGCCAACAGCCACATGGGTTTAAATCC...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACACTCTGTATCCGTCTTaGATGCATTCACGGCCACTA +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDTLYPS*MHSRPL
Trigger: TAGTGGCCGTGAATGCATTCAAGACGGATACAGAGT...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGAGCCCCTACCAGTATTaGGGATTTAAACCCATGTGG +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRSPYQY*GFKPMW
Trigger: CCACATGGGTTTAAATCCTCAATACTGGTAGGGGCT...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATGCAGTATCAGTCGTATaGGAGAGGATGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYAVSVV*ERMEEE
Trigger: CTCCTCCTCCATCCTCTCTCATACGACTGATACTGC...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR TCA 90 bp CACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAACTCTGCCACTTGGCATTTGCTTaGTGGTTTCGGCAACACACT +
Preference number: 4 (lower is better)
Translates to: HSNHNRPDSNFLLGSELCHLAFA*WFRQHT
Trigger: AGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTG...GCAGAGTTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR TCA 90 bp TTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCATCCTGGCATCATTCTTaGTTTGACACCAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FLLGSELCSLGICLMVSASWHHS*FDTKMV
Trigger: GACCATCTTGGTGTCAAATCAAGAATGATGCCAGGA...TGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp CACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAACTCTGCACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 4 (lower is better)
Translates to: HSNHNRPDSNFLLGSELCTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...GCAGAGTTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTGTGGGTGAGGCTCTCTaGCATAGAGCTGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFVGEAL*HRAGAL
Trigger: CAGAGCCCCAGCTCTATGGCAGAGAGCCTCACCCAC...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAGAGAATTGCTTGTATaGAGGAGGCAGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDRELLV*RRQRLQ
Trigger: CTGCAACCTCTGCCTCCTGCATACAAGCAATTCTCT...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR GCA 90 bp CCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATCAACTTCAGACGAGAAGTaGAGATGCGCCCACTACTCC +
Preference number: 4 (lower is better)
Translates to: PQQELYSSCFIAYDPQQSTSDEK*RCAHYS
Trigger: GGAGTAGTGGGCGCATCTGCACTTCTCGTCTGAAGT...TGATTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CCA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTGATTTTATCCTCAACTaGGAGCTTGAGGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLDFILN*ELEVIK
Trigger: CTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATC...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAGCCTCCCAAGTACCTaGGGTTATAGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHSLPST*GYRCLP
Trigger: TGGCAGGCACCTATAACCCCAGGTACTTGGGAGGCT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTCTGCAAACAGGGCCTaGAGGATGCTGTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVASANRA*RMLCNR
Trigger: CCTGTTGCACAGCATCCTCCAGGCCCTGTTTGCAGA...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTCCTCAACTGGGAGCTTaGGGTCATAAAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAPQLGA*GHKGAG
Trigger: TCCAGCTCCTTTATGACCTCAAGCTCCCAGTTGAGG...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAACTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSELLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR TCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTACTGTGCTCTGCATaGGCATTGCAACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTLLCSA*ALQLSW
Trigger: CCATGACAGTTGCAATGCTCATGCAGAGCACAGTAG...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTGGGGCTCTGCACTGTaGCCCCTTTGCCATATGCCT +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFWGSAL*PLCHMP
Trigger: AGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGAGGTTGCAGTGAGCTaGGATCACGTCACTACACTG +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAEVAVS*DHVTTL
Trigger: CAGTGTAGTGACGTGATCTCAGCTCACTGCAACCTC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATCAAACAAGTCATCCCTaGCCTCCACCAACACACATA +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHQTSHP*PPPTHI
Trigger: TATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTG...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGGAAAAACACACAGGTaGCACATGGGATTTATTGCA +
Preference number: 4 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLGKTHR*HMGFIA
Trigger: TGCAATAAATCCCATGTGTCACCTGTGTGTTTTTCC...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATCTCTCTACTGTGCTCTaGATGAGCATTGCAACTGTC +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHLSTVL*MSIATV
Trigger: GACAGTTGCAATGCTCATGCAGAGCACAGTAGAGAG...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAAGTCTCGCCCTTATTTaGGCGGAGATCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLSLALI*AEISFP
Trigger: CGGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACT...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATTTGCTCAGGCTGGAATaGGGTGGCTCAGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHLLRLE*GGSVIA
Trigger: AGCTATGACTGAGCCACCGCATTCCAGCCTGAGCAA...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATGGGCACCATGAGGGTTaGACAGAGCCAACACAAACT +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHGHHEG*TEPTQT
Trigger: AGTTTGTGTTGGCTCTGTGCAACCCTCATGGTGCCC...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACAGGAGTCCAGGCATTGTaGTCATCGTTCCTACTAAGG +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTGVQAL*SSFLLR
Trigger: CCTTAGTAGGAACGATGAGCACAATGCCTGGACTCC...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp CACCAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCTGGGCAGTGAACTCTaGTCACTTGGCATTTGCTTG +
Preference number: 4 (lower is better)
Translates to: HQDGPQQELYSSCFIAYDLGSEL*SLGICL
Trigger: CAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAG...ATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CCA 90 bp TTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTCCAGGAAAGCAAGGATATTCACTTaGGGCTCTCCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FNQFLCKDIHLGLSTSRKARIFT*GSPPPG
Trigger: TCCTGGAGGTGGAGAGCCCCAAGTGAATATCCTTGC...TTTCCTGGAGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CCA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCTACAAGGGAATAATATaGTACCTCTTAAACCAAGGA +
Preference number: 4 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSYKGII*YLLNQG
Trigger: TCCTTGGTTTAAGAGGTACCATATTATTCCCTTGTA...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CCA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCAACAAACAAACTAGCTaGACATGGTGGCGGACGCCT +
Preference number: 4 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFNKQTS*TWWRTP
Trigger: AGGCGTCCGCCACCATGTCCAGCTAGTTTGTTTGTT...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652179.1
3UTR CAA 72 bp GAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTaGGAAAGGGACAAATTGTTACCGTCCGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: EAARSSASELIS*ERDKLLPSVCD
Trigger: GTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR TCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACAACTCTGTATCCGTCTTaGATGCATTCACGGCCACTA +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTTLYPS*MHSRPL
Trigger: TAGTGGCCGTGAATGCATTCAAGACGGATACAGAGT...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAATGGCTGGCGGAAATaGTTGGCGGAAAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHNGWRK*LAERKS
Trigger: GCTCTTTCTTTCCGCCAATCATTTCCGCCAGCCATT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTATCCCTGGGACACCATTaGATGAACCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLSLGHH*MNLRLQ
Trigger: TTGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGA...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGCACTGGGAAAAATACTaGTTTGCCAACATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRHWEKY*FANISS
Trigger: ACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTG...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTCAATTCATTGGTTATTaGCAACTCTCATTACTATCC +
Preference number: 4 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASQFIGY*QLSLLS
Trigger: GGATAGTAATGAGAGTTGGCAATAACCAATGAATTG...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTCAATTCATTGGTTATTaGCAACTCTCATTACTATCC +
Preference number: 4 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLQFIGY*QLSLLS
Trigger: GGATAGTAATGAGAGTTGGCAATAACCAATGAATTG...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGAGGCTCCAAGTCTCTaGTGGTTTCATCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAEAPSL*WFHLFL
Trigger: CAGGAACAGATGAAACCACCAGAGACTTGGAGCCTC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTGCAGTGAGCCAAGATTaGACACAGCAAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSAVSQD*TQQDFI
Trigger: GATGAAGTCTTGCTGTGTCCAATCTTGGCTCACTGC...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR TCA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGATGATTTTATCCCTATaGAGGCCGCTTATAATCATG +
Preference number: 4 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLMILSL*RPLIIM
Trigger: CATGATTATAAGCGGCCTTCATAGGGATAAAATCAT...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTTGGAAAGGGGTCAGTCTTTTCAATaGCTAGTCTCTTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: RRREAARSSASELISLERGQSFQ*LVSLTF
Trigger: GAAGGTTAAAGAGACTAGGCATTGAAAAGACTGACC...CCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGGTATCCAACACTCTTTaGCAAGTTATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRVSNTL*QVMVSG
Trigger: TCCAGAAACCATAACTTGGCAAAGAGTGTTGGATAC...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTGACCCCTTTGCCATATaGCTCTCAAGGCAGCGCTAT +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFDPFAI*LSRQRY
Trigger: ATAGCGCTGCCTTGAGAGGCATATGGCAAAGGGGTC...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACAACCTGTGACAAGCCATaGTGCGCTTCTTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTTCDKP*CASSKN
Trigger: ATTTTTGGAAGAAGCGCAGCATGGCTTGTCACAGGT...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACGATTTTATCCTCAACTaGGAGCTTGAGGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDDFILN*ELEVIK
Trigger: CTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATC...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTCAGGCAGAGGTCAAGTaGAATGCAGAATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSQAEVK*NAEYSQ
Trigger: CTGAGAATATTCTGCATTCCACTTGACCTCTGCCTG...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR CCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAAATTCCAATTTTCTTCTaGGCAGTGAACTCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQIPIFF*AVNSAH
Trigger: GTGAGCAGAGTTCACTGCCCAGAAGAAAATTGGAAT...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
3UTR CAA 72 bp AATAATAAAACCAAGGTCACTGGGAAAAATACTGCTTaGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NNKTKVTGKNTA*PTSAVFSTGAS
Trigger: ACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 4 (lower is better)
Translates to: EAILINFYARIFTWGSPPTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTACAGGAACTGACAAGTaGTTACAATGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFTGTDK*LQCARP
Trigger: GGGCCTGGCACATTGTAAGCACTTGTCAGTTCCTGT...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATGCACTAGACCTTCTCTaGCAGCACATGCTAATAGTT +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHALDLL*QHMLIV
Trigger: AACTATTAGCATGTGCTGGCAGAGAAGGTCTAGTGC...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATGATTTTATCCTCAACTaGGAGCTTGAGGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHDFILN*ELEVIK
Trigger: CTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATC...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATTTAACCTTCGGATTTaGATGTCAGAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQFNLRI*MSENLL
Trigger: GAGAAGGTTCTCTGACATCCAAATCCGAAGGTTAAA...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTAGGCAGAACAACACCTaGCAGTATCAGTCGTATGAG +
Preference number: 4 (lower is better)
Translates to: EAILINFYARIFTWGSPPRQNNT*QYQSYE
Trigger: CTCATACGACTGATACTGCCAGGTGTTGTTCTGCCT...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CCA 90 bp CACCAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATGATTTGACACCAAGATaGTCCACAGCAAGAGCTATA +
Preference number: 4 (lower is better)
Translates to: HQDGPQQELYSSCFIAYDDLTPR*STARAI
Trigger: TATAGCTCTTGCTGTGGACCATCTTGGTGTCAAATC...ATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR TCA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATACTGTATTACAACATTaGCATGGACCTAGGGAATTA +
Preference number: 4 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHTVLQH*HGPREL
Trigger: TAATTCCCTAGGTCCATGTCAATGTTGTAATACAGT...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCAGAATCTAAAGGTAGCTaGACTAAGAACCCATGTACA +
Preference number: 4 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPESKGS*TKNPCT
Trigger: TGTACATGGGTTCTTAGTGCAGCTACCTTTAGATTC...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTGAATCTAAAGGTAGCTaGACTAAGAACCCATGTACA +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSESKGS*TKNPCT
Trigger: TGTACATGGGTTCTTAGTGCAGCTACCTTTAGATTC...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCGAATCTAAAGGTAGCTaGACTAAGAACCCATGTACA +
Preference number: 4 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFESKGS*TKNPCT
Trigger: TGTACATGGGTTCTTAGTGCAGCTACCTTTAGATTC...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTACAGTCGATGACTATTaGCCCAGGTTTGATCCACTC +
Preference number: 4 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPTVDDY*PRFDPL
Trigger: GAGTGGATCAAACCTGGGGCAATAGTCATCGACTGT...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAAGGTCAGTCTTTTCAATaGCTAGTCTCTTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSEGQSFQ*LVSLTF
Trigger: GAAGGTTAAAGAGACTAGGCATTGAAAAGACTGACC...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCAGTATCCAACACTCTTTaGCAAGTTATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPVSNTL*QVMVSG
Trigger: TCCAGAAACCATAACTTGGCAAAGAGTGTTGGATAC...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCGTATCCAACACTCTTTaGCAAGTTATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFVSNTL*QVMVSG
Trigger: TCCAGAAACCATAACTTGGCAAAGAGTGTTGGATAC...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR GCA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTGTATCCAACACTCTTTaGCAAGTTATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSVSNTL*QVMVSG
Trigger: TCCAGAAACCATAACTTGGCAAAGAGTGTTGGATAC...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CCA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAAGATTTTATCCTCAACTaGGAGCTTGAGGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSEDFILN*ELEVIK
Trigger: CTTTATGACCTCAAGCTCCCAGTTGAGGATAAAATC...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CCA 90 bp ATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACATTTAACCTTCGGATTTaGATGTCAGAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: ISPVVSSVVYWTAVFSPTFNLRI*MSENLL
Trigger: GAGAAGGTTCTCTGACATCCAAATCCGAAGGTTAAA...TGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR TCA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAGAAACCTGTCATTCCTaGATTCAGGTAAGTGACAAC +
Preference number: 4 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLETCHS*IQVSDN
Trigger: GTTGTCACTTACCTGAATTCAGGAATGACAGGTTTC...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGAATCTAAAGGTAGCTaGACTAAGAACCCATGTACA +
Preference number: 4 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAESKGS*TKNPCT
Trigger: TGTACATGGGTTCTTAGTGCAGCTACCTTTAGATTC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATGTATCCAGTACCTCATaGATGAAAGAAACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHVSSTS*MKETCH
Trigger: ATGACAGGTTTCTTTCATGCATGAGGTACTGGATAC...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCAGAGCTATATAGCTCCTaGTTTATAGCTTATGATCCA +
Preference number: 4 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPELYSS*FIAYDP
Trigger: TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTC...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR GCA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTGAATCTAAAGGTAGCTaGACTAAGAACCCATGTACA +
Preference number: 4 (lower is better)
Translates to: EAILINFYARIFTWGSPPESKGS*TKNPCT
Trigger: TGTACATGGGTTCTTAGTGCAGCTACCTTTAGATTC...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR GCA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAGGTCAGTCTTTTCAATaGCTAGTCTCTTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLGQSFQ*LVSLTF
Trigger: GAAGGTTAAAGAGACTAGGCATTGAAAAGACTGACC...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTGTGTACATCTTCAGTaGACAGAAACAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFCVHLQ*TETASE
Trigger: TTCAGAGGCTGTTTCTGTGCACTGAAGATGTACACA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR GCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTGGCTGTAATTCATATTaGAACACCAAGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFGCNSY*NTKMAN
Trigger: GTTTGCCATCTTGGTGTTGCAATATGAATTACAGCC...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATATTGCAACACCAAGATaGCAAACTTGTTTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHIATPR*QTCFLL
Trigger: TAAAAGGAAACAAGTTTGCCATCTTGGTGTTGCAAT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR TCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTTAGAAGAAACTCAATaGATACTTGCTGCACCAACA +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFLEETQ*ILAAPT
Trigger: TGTTGGTGCAGCAAGTATTCATTGAGTTTCTTCTAA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CCA 90 bp AGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTTTTTATATCAATGTCACTTaGAACAGGTGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLFKLLPISLSTTPLVAFYINVT*NRCLEV
Trigger: AACCTCAAGACACCTGTTCCAAGTGACATTGATATA...AAAAGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 90 bp CCCTCCGCAGCCAAGCAGGACAACCCAACCCACGTGCTTAGGGACTaGCCAGGGGATCACACTACTGCGCCTGCGCCCCTGCCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: PSAAKQDNPTHVLRD*PGDHTTAPAPLPAS
Trigger: AGAAGCGGGCAGGGGCGCAGGCGCAGTAGTGTGATCCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGTCCTGCTTGGCTGCGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 90 bp GAGGTTCCACTCCCTCCGCAGCCAAGCAGGACAACCCAACCCACGTaGTTAGGGACTGGCCAGGGGATCACACTACTGCGCCTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: EVPLPPQPSRTTQPT*LGTGQGITLLRLRP
Trigger: GGGGCGCAGGCGCAGTAGTGTGATCCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGTCCTGCTTGGCTGCGGAGGGAGTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS TCA 90 bp GAGTGCCAGTGGTCAGATGGCAGGAAGCTGGATGTGGCGCCACAGTaGCCACTGCCCTTGAGGAGCTATCTAGGCAGGAGAGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: ECQWSDGRKLDVAPQ*PLPLRSYLGRRAQD
Trigger: GTCCTGTGCTCTCCTGCCTAGATAGCTCCTCAAGGGCAGTGGTCACTGTGGCGCCACATCCAGCTTCCTGCCATCTGACCACTGGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS-3UTR CAA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGGTTCACAGTGCGCCTTaGTATTCGGCGGGAAACCCG +
Preference number: 5 (lower is better)
Translates to: HRAGALHCDPFAICLSRQVHSAP*YSAGNP
Trigger: CGGGTTTCCCGCCGAATACAAAGGCGCACTGTGAAC...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACTTGCCATGTGCGATGTaGGCAAACGGGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDLPCAM*ANGPAW
Trigger: CCATGCTGGCCCGTTTGCCAACATCGCACATGGCAA...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp GAACCTGAGGCTCCAAGTCTCTGGTGGTTTCATCTGTTCCTGGGCACCATGAGGCAGTCTCGCCCTTATTaGCGCGGAGATCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: EPEAPSLWWFHLFLGTMRQSRPY*RGDLLP
Trigger: GGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACTG...CCTCATGGTGCCCAGGAACAGATGAAACCACCAGAGACTTGGAGCCTCAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAATGCACTGTGACCCCTTaGCCATATGCCTCTCAAGGC +
Preference number: 5 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIECTVTP*PYASQG
Trigger: GCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCA...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTAAGCTCGCCCTCTCTTaGGCCTCGTCGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAKLALS*ASSYAT
Trigger: TGTGGCATACGACGAGGCCAAAGAGAGGGCGAGCTT...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CATAGAGCTGGGGCTCTGCACTGTGACCCCTTTGCCATATGCCTCTCAAGGCAGTTCCCTGGGACACCATaGAATGAACCTGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: HRAGALHCDPFAICLSRQFPGTP*NEPEAP
Trigger: TGGAGCCTCAGGTTCATTCAATGGTGTCCCAGGGAA...CTGCCTTGAGAGGCATATGGCAAAGGGGTCACAGTGCAGAGCCCCAGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAGACTCTGTATCCGTCTaGAATGCATTCACGGCCACT +
Preference number: 5 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEDSVSV*NAFTAT
Trigger: AGTGGCCGTGAATGCATTCAAGACGGATACAGAGTC...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp ACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTAAGCTCGCCCTCTCTTaGGCCTCGTCGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: TAVFSPTLSTCDKPCCASKLALS*ASSYAT
Trigger: TGTGGCATACGACGAGGCCAAAGAGAGGGCGAGCTT...AGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp AATACTGCTTTGCCAACATCAGCAGTGTTTAGCACTGGCGCCAGTGGGATGCAGTTGGCCAAGCTGGTCTaGAACCCCAGACCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: NTALPTSAVFSTGASGMQLAKLV*NPRPQV
Trigger: CACTTGAGGTCTGGGGTTCAAGACCAGCTTGGCCAA...CTGCATCCCACTGGCGCCAGTGCTAAACACTGCTGATGTTGGCAAAGCAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 90 bp GATGGTGATCTGCAATGTGTCATCAACTCTGAACCCCAAGCCTCCTaGGGCTTCAGCAGAGGGAGTCTAACCTCTCCTGTAGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: DGDLQCVINSEPQAS*GFSRGSLTSPVVSS
Trigger: AGAGGAAACTACAGGAGAGGTTAGACTCCCTCTGCTGAAGCCCCAGGAGGCTTGGGGTTCAGAGTTGATGACACATTGCAGATCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556284.1
CDS-3UTR CAA 90 bp TTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCAAAGCTCGCCCTCTCTTaGGCCTCGTCGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: FLLGSELCSLGICLMVSAKLALS*ASSYAT
Trigger: TGTGGCATACGACGAGGCCAAAGAGAGGGCGAGCTT...TGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDRLKRA*SVWVSS
Trigger: TGAACTGACCCAGACAGACAAGGCTCTCTTTAATCG...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAAAACCCATGTGGCTGTaGGCGATATTAGGAAACCTA +
Preference number: 5 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIEKPMWL*AILGNL
Trigger: TAGGTTTCCTAATATCGCCAACAGCCACATGGGTTT...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS TCA 90 bp GTGAGCCACCGCGCCTTGCAAGTGTGCTTTATAACCACTCTGCTCTaGCTGTCCAAAACCAATTCAAGAAGGCAGGAGTCACTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VSHRALQVCFITTLL*LSKTNSRRQESLCS
Trigger: TGAGCAGAGTGACTCCTGCCTTCTTGAATTGGTTTTGGACAGTCAGAGCAGAGTGGTTATAAAGCACACTTGCAAGGCGCGGTGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554677.1
CDS GCA 90 bp CCACTAAGAATGCAGGTGAGGGAACTACAAAGGGCAAACGAGGCATaGGCAGGGAAGGGAAAGTGGTCCACTTTACAAGTTGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: PLRMQVRELQRANEA*AGKGKWSTLQVEDR
Trigger: CCTGTCTTCAACTTGTAAAGTGGACCACTTTCCCTTCCCTGCGCATGCCTCGTTTGCCCTTTGTAGTTCCCTCACCTGCATTCTTAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS-3UTR CAA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACTTGCCATGTGCGATGTaGGCAAACGGGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDLPCAM*ANGPAW
Trigger: CCATGCTGGCCCGTTTGCCAACATCGCACATGGCAA...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGGAGCGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCC +
Preference number: 5 (lower is better)
Translates to: PWKGTNCYRPCVTLLRWSASFPA*MLVNPS
Trigger: GGATGGATTGACTAGCATCAATGCTGGGAAACTTGC...GCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CAA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCC +
Preference number: 5 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAASFPA*MLVNPS
Trigger: GGATGGATTGACTAGCATCAATGCTGGGAAACTTGC...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CTTACATTTCAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTTATCCCATCTaGATCTCTACCCATTGCCTG +
Preference number: 5 (lower is better)
Translates to: LTFQRPSGNKPSNPVPWDTIYPI*ISTHCL
Trigger: CAGGCAATGGGTAGAGATCAAGATGGGATAAATGGT...GTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTGAAATGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp ATTTCCTTGGAAAGGGACAAATTGTTACCGTCCGTGTGTGACCCTTCTCCGTTGTGCAAGGATATTCACTaGGGGCTCTCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ISLERDKLLPSVCDPSPLCKDIH*GLSTSR
Trigger: CCTGGAGGTGGAGAGCCCCAAGTGAATATCCTTGCA...CAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CAA 90 bp CTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCAACACACCTGCTCACTTGGCATTaGCTTGATGGTTTCGGCAAC +
Preference number: 5 (lower is better)
Translates to: LGSELCSLGICLMVSATHLLTWH*LDGFGN
Trigger: GTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAG...GTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS TCA 90 bp TCAGTCTCGCCCTTATTTGCCTGTAATCCCAGGTACTCAGGAGGCTaGTATGAGAGAATTGCTTGTATGCAGGAGGCAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVSPLFACNPRYSGG*YERIACMQEAEVAV
Trigger: CACTGCAACCTCTGCCTCCTGCATACAAGCAATTCTCTCATATCAGCCTCCTGAGTACCTGGGATTACAGGCAAATAAGGGCGAGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554739.5
CDS TCA 90 bp CCAATTTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTaGTGGTTTCGGCAACACACTTCAGACGAGAAGTGCAGATGCGCC +
Preference number: 5 (lower is better)
Translates to: PIFFWAVNSAHLAFA*WFRQHTSDEKCRCA
Trigger: GGCGCATCTGCACTTCTCGTCTGAAGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS GCA 90 bp TCATTTAATATAACTCCTCAGCACACTGCAGGCCTTTTGGCACCCTaGACCCTGGGTCACAGCAATAACCCATTCATTTCCACATGGGCC +
Preference number: 5 (lower is better)
Translates to: SFNITPQHTAGLLAP*TLGHSNNPFISTWA
Trigger: GGCCCATGTGGAAATGAATGGGTTATTGCTGTGACCCAGGGTGCAGGGTGCCAAAAGGCCTGCAGTGTGCTGAGGAGTTATATTAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556771.5
CDS CCA 90 bp AGGGAACTACAAAGGGCAAACGAGGCATGCGCAGGGAAGGGAAAGTaGTCCACTTTACAAGTTGAAGACAGGTATTCACCATGCGCAAGT +
Preference number: 5 (lower is better)
Translates to: RELQRANEACAGKGK*STLQVEDRYSPCAS
Trigger: ACTTGCGCATGGTGAATACCTGTCTTCAACTTGTAAAGTGGACCACTTTCCCTTCCCTGCGCATGCCTCGTTTGCCCTTTGTAGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS-3UTR CAA 90 bp CTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCAACACACGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCC +
Preference number: 5 (lower is better)
Translates to: LGSELCSLGICLMVSATHASFPA*MLVNPS
Trigger: GGATGGATTGACTAGCATCAATGCTGGGAAACTTGC...GTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp CAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTTCTTCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: QQFSPLHCQPVTSHAALLRLKRA*SVWVSS
Trigger: TGAACTGACCCAGACAGACAAGGCTCTCTTTAATCG...AAGAAGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp TGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACAAGCCATGCTGCGCTGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: WTAVFSPTLSTCDKPCCAGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...AGCGCAGCATGGCTTGTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCATTGCCATGTGCGATGTaGGCAAACGGGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPLPCAM*ANGPAW
Trigger: CCATGCTGGCCCGTTTGCCAACATCGCACATGGCAA...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATCAGTCTCGCCCTTATTaGCGCGGAGATCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYQSRPY*RGDLLP
Trigger: GGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACTG...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CAA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGTCTCGCCCTTATTaGCGCGGAGATCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPQSRPY*RGDLLP
Trigger: GGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACTG...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp CAGAGGCCTTCTGGGAATAAGCCCTCCAACCCCGTTCCCTGGGACACCATTGAAAGTTCAGGCAAAAACTaGTATAAGCAATACTTCCTC +
Preference number: 5 (lower is better)
Translates to: QRPSGNKPSNPVPWDTIESSGKN*YKQYFL
Trigger: GAGGAAGTATTGCTTATACAAGTTTTTGCCTGAACT...TTCAATGGTGTCCCAGGGAACGGGGTTGGAGGGCTTATTCCCAGAAGGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAAGCGCCCACTACTCCCTaGCAGCATGCACTTACCGTT +
Preference number: 5 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSEAPTTP*QHALTV
Trigger: AACGGTAAGTGCATGCTGCAAGGGAGTAGTGGGCGC...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACGACTCTGTATCCGTCTaGAATGCATTCACGGCCACT +
Preference number: 5 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDDSVSV*NAFTAT
Trigger: AGTGGCCGTGAATGCATTCAAGACGGATACAGAGTC...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp TTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTGATGGTTTCGGCACGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: FLLGSELCSLGICLMVSARLKRA*SVWVSS
Trigger: TGAACTGACCCAGACAGACAAGGCTCTCTTTAATCG...TGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATCTTGATCTCTACCCATaGCCTGGGCCTATAGCTACC +
Preference number: 5 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHLDLYP*PGPIAT
Trigger: GGTAGCTATAGGCCCAGGCAATGGGTAGAGATCAAG...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 90 bp GATTCCAATTTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTaGTTGATGGTTTCGGCAACACACTTCAGACGAGAAGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: DSNFLLGSELCSLGI*LMVSATHFRREVQM
Trigger: CATCTGCACTTCTCGTCTGAAGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAAATTGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAAAGCTCGCCCTCTCTTaGGCCTCGTCGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLKLALS*ASSYAT
Trigger: TGTGGCATACGACGAGGCCAAAGAGAGGGCGAGCTT...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp AGGAGGAGAGAAGCAGCAAGATCTAGTGCCTCTGAACTAATTTCCTTGGAAAGGTTGGAAAGGGACAAATaGTTACCGTCCGTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: RRREAARSSASELISLERLERDK*LPSVCD
Trigger: GTCACACACGGACGGTAACAATTTGTCCCTTTCCAA...CCTTTCCAAGGAAATTAGTTCAGAGGCACTAGATCTTGCTGCTTCTCTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CAA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTTTGCCATGTGCGATGTaGGCAAACGGGCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPLPCAM*ANGPAW
Trigger: CCATGCTGGCCCGTTTGCCAACATCGCACATGGCAA...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CAAGATGGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCAGACTCTGTATCCGTCTaGAATGCATTCACGGCCACT +
Preference number: 5 (lower is better)
Translates to: QDGPQQELYSSCFIAYDPDSVSV*NAFTAT
Trigger: AGTGGCCGTGAATGCATTCAAGACGGATACAGAGTC...TGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCGACTCTGTATCCGTCTaGAATGCATTCACGGCCACT +
Preference number: 5 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFDSVSV*NAFTAT
Trigger: AGTGGCCGTGAATGCATTCAAGACGGATACAGAGTC...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTCAGTCTCGCCCTTATTaGCGCGGAGATCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPQSRPY*RGDLLP
Trigger: GGGAAGGAGATCTCCGCGCAAATAAGGGCGAGACTG...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651537.1
CDS-3UTR CAA 90 bp ATGAATACTTGCTGCACCAACAGAATAGAGGCTCACCTAAGGCTAATGCTGCATGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCC +
Preference number: 5 (lower is better)
Translates to: MNTCCTNRIEAHLRLMLHASFPA*MLVNPS
Trigger: GGATGGATTGACTAGCATCAATGCTGGGAAACTTGC...ATGCAGCATTAGCCTTAGGTGAGCCTCTATTCTGTTGGTGCAGCAAGTATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp TCCTCTGTAGTTTATTGGACAGCAGTTTTCTCCCCTACACTGTCAACCTGTGACGGAATGAAACAGTCATaGAGGTCACCTCTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: SSVVYWTAVFSPTLSTCDGMKQS*RSPLAS
Trigger: ACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCC...GTCACAGGTTGACAGTGTAGGGGAGAAAACTGCTGTCCAATAAACTACAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp GGTCCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATCACTTGGCATTTGCTaGATGGTTTCGGCAACACAC +
Preference number: 5 (lower is better)
Translates to: GPQQELYSSCFIAYDPQQSLGIC*MVSATH
Trigger: GTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGA...TTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTCAGTCTCGCCCTTATTaGCCTGTAGTCTCAGCTACT +
Preference number: 5 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSQSRPY*PVVSAT
Trigger: AGTAGCTGAGACTACAGGCAAATAAGGGCGAGACTG...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR CAA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTCGATTAAAGAGAGCCTaGTCTGTCTGGGTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSRLKRA*SVWVSS
Trigger: TGAACTGACCCAGACAGACAAGGCTCTCTTTAATCG...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGGGGAAAAATACTGCTTaGCCAACATCAGCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRGKNTA*PTSAVF
Trigger: AAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCC...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCTGCAGTGAGCCAAGATaGGACACAGCAAGACTTCAT +
Preference number: 5 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFCSEPR*DTARLH
Trigger: ATGAAGTCTTGCTGTGTCCAATCTTGGCTCACTGCA...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR CAA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTGCTGATATGAGAGAATaGCTTGTATGCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSADMRE*LVCRRQ
Trigger: CTGCCTCCTGCATACAAGCAATTCTCTCATATCAGC...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652179.1
CDS-3UTR CAA 90 bp ATAAAACCAAGGTCACTGGGAAAAATACTGCTTTGCCAACATCAGCAGTGTTTAGCAATGATGGAGGAATaGCCATGTGCGATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: IKPRSLGKILLCQHQQCLAMMEE*PCAMLA
Trigger: TGCCAACATCGCACATGGCAATTCCTCCATCATTGC...TAAACACTGCTGATGTTGGCAAAGCAGTATTTTTCCCAGTGACCTTGGTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATCAGGAATGAAACAGTCATaGAGGTCACCTCTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: PQQELYSSCFIAYDPQQSGMKQS*RSPLAS
Trigger: ACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCC...TGATTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCGGAATGAAACAGTCATaGAGGTCACCTCTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFGMKQS*RSPLAS
Trigger: ACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCC...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp ACTTCCATTTTAAAAGGGAGAAGGCAGAACAACACCTGGCAGTATCAGTCGTATGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TSILKGRRQNNTWQYQSYGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...ATACGACTGATACTGCCAGGTGTTGTTCTGCCTTCTCCCTTTTAAAATGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS-3UTR CAA 90 bp ATGATCCACAGCAATCATAATAGGCCCGATTCCAATTTTCTTCTGGGCAGTGAAGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: MIHSNHNRPDSNFLLGSEGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...TTCACTGCCCAGAAGAAAATTGGAATCGGGCCTATTATGATTGCTGTGGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS-3UTR CAA 90 bp TGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTTCGGTATCCAACACTCTTaGCCAAGTTATGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: WMVISPVVSSVVYWTAVFGIQHS*PSYGFW
Trigger: CCAGAAACCATAACTTGGCAAAGAGTGTTGGATACC...GAAAACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp AAGATGGATGGTGATCTCTCCTGTAGTTTCCTCTGTAGTTTATTGGACAGCAGTTTCCTCTGTAGTTTATaGGACAGCAGTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: KMDGDLSCSFLCSLLDSSFLCSL*DSSFLP
Trigger: GGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAA...ACTGCTGTCCAATAAACTACAGAGGAAACTACAGGAGAGATCACCATCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp CCACAGCAAGAGCTATATAGCTCCTGCTTTATAGCTTATGATCCACAGCAATCAGGCATCATTCTTGATTaGACACCAAGATGGTCCACA +
Preference number: 5 (lower is better)
Translates to: PQQELYSSCFIAYDPQQSGIILD*TPRWST
Trigger: TGTGGACCATCTTGGTGTCAAATCAAGAATGATGCC...TGATTGCTGTGGATCATAAGCTATAAAGCAGGAGCTATATAGCTCTTGCTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS TCA 90 bp TCTTGGATCTATGAGGACGTACGCAAGTTTTGCCCTATTGTTCTGTaGAGTTTTCTGTTTGAAAGAGTAGCCCACTCCACTAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: SWIYEDVRKFCPIVL*SFLFERVAHSTKNA
Trigger: TGCATTCTTAGTGGAGTGGGCTACTCTTTCAAACAGAAAACTTCACAGAACAATAGGGCAAAACTTGCGTACGTCCTCATAGATCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS-3UTR CAA 90 bp CGAAGGCTGTTTAAGCTATTACCCATATCATTGTCTACTACCCCATTAGTAGCTGGAATGAAACAGTCATaGAGGTCACCTCTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: RRLFKLLPISLSTTPLVAGMKQS*RSPLAS
Trigger: ACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCC...AGCTACTAATGGGGTAGTAGACAATGATATGGGTAATAGCTTAAACAGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp CCATTCCAGGTGAAGTTTCACAGGACATTAAGAAATGTACCAGAAAGCGGTCGGCTATTACCCATATCATaGTCTACTACCCCATTAGTA +
Preference number: 5 (lower is better)
Translates to: PFQVKFHRTLRNVPESGRLLPIS*STTPLV
Trigger: TACTAATGGGGTAGTAGACAATGATATGGGTAATAG...CCGACCGCTTTCTGGTACATTTCTTAATGTCCTGTGAAACTTCACCTGGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS-3UTR CAA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCC +
Preference number: 5 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPASFPA*MLVNPS
Trigger: GGATGGATTGACTAGCATCAATGCTGGGAAACTTGC...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp GAAGCAATTTTAATCAATTTCTATGCAAGGATATTCACTTGGGGCTCTCCACCTGGAATGAAACAGTCATaGAGGTCACCTCTAGCAAGT +
Preference number: 5 (lower is better)
Translates to: EAILINFYARIFTWGSPPGMKQS*RSPLAS
Trigger: ACTTGCTAGAGGTGACCTCAATGACTGTTTCATTCC...AGGTGGAGAGCCCCAAGTGAATATCCTTGCATAGAAATTGATTAAAATTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555709.7
CDS TCA 90 bp TGCAATGTCTTAAGTACAGCATTACATTTTGTTATTAATAACTGCTaGAAGACCCTAGGACAACAGACACAGATATGTCGCCAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: CNVLSTALHFVINNC*KTLGQQTQICRQAW
Trigger: CCAGGCTTGGCGACATATCTGTGTCTGTTGTCCTAGGGTCTTTCAGCAGTTATTAATAACAAAATGTAATGCTGTACTTAAGACATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555252.5
ENST00000650853.1
CDS TCA 90 bp AGCAACAAAGATAAAGCAATGGTACTCTTGATGTTCTCTGCAAATTaGAGTCATACACCCACTTTTAGAGATGCCCACAGGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: SNKDKAMVLLMFSAN*SHTPTFRDAHRMKM
Trigger: CATCTTCATCCTGTGGGCATCTCTAAAAGTGGGTGTATGACTTCAATTTGCAGAGAACATCAAGAGTACCATTGCTTTATCTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS TCA 90 bp TACACAGTAGTTGCTCCGTTAAAGATTGTTCCTTTCTTGGATCTATaGGGACGTACGCAAGTTTTGCCCTATTGTTCTGTGAAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: YTVVAPLKIVPFLDL*GRTQVLPYCSVKFS
Trigger: AGAAAACTTCACAGAACAATAGGGCAAAACTTGCGTACGTCCTCATAGATCCAAGAAAGGAACAATCTTTAACGGAGCAACTACTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS-3UTR CAA 90 bp AAATATTTCAATTCATTGGTTATTGCCAACTCTCATTACTATCCCCTCTCCCCTTTCCTCTGTAGTTTATaGGACAGCAGTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: KYFNSLVIANSHYYPLSPFLCSL*DSSFLP
Trigger: GGGGAGAAAACTGCTGTCCAATAAACTACAGAGGAA...AGGGGAGAGGGGATAGTAATGAGAGTTGGCAATAACCAATGAATTGAAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651537.1
ENST00000652179.1
CDS-3UTR CAA 90 bp ACTTCCTTAAGGTATATTACAAACAAGTCATCCCTGACCTCCACCAACACACATAAACTCAATGAATACTaGCTGCACCAACAGAATAGA +
Preference number: 5 (lower is better)
Translates to: TSLRYITNKSSLTSTNTHKLNEY*LHQQNR
Trigger: TCTATTCTGTTGGTGCAGCAAGTATTCATTGAGTTT...ATGTGTGTTGGTGGAGGTCAGGGATGACTTGTTTGTAATATACCTTAAGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 72 bp CACTACTGCGCCTGCGCCCCTGCCCGCTTCTCCCCCTaGAGACGCGGTGGCGCATGCGCAGTTCGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: HYCACAPARFSP*RRGGACAVRKD
Trigger: GTCCTTCCGAACTGCGCATGCGCCACCGCGTCTGCAGGGGGAGAAGCGGGCAGGGGCGCAGGCGCAGTAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 72 bp CTGCGCCCCTGCCCGCTTCTCCCCCTGCAGACGCGGTaGCGCATGCGCAGTTCGGAAGGACCCGAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: LRPCPLLPLQTR*RMRSSEGPESL
Trigger: AAGGGACTCGGGTCCTTCCGAACTGCGCATGCGCCACCGCGTCTGCAGGGGGAGAAGCGGGCAGGGGCGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 72 bp CCTGCCCGCTTCTCCCCCTGCAGACGCGGTGGCGCATaGGCAGTTCGGAAGGACCCGAGTCCCTTAACTAAC +
Preference number: 6 (lower is better)
Translates to: PARFSPCRRGGA*AVRKDPSPLTN
Trigger: GTTAGTTAAGGGACTCGGGTCCTTCCGAACTGCGCATGCGCCACCGCGTCTGCAGGGGGAGAAGCGGGCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 72 bp GCCAAGCAGGACAACCCAACCCACGTGCTTAGGGACTaGCCAGGGGATCACACTACTGCGCCTGCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: AKQDNPTHVLRD*PGDHTTAPAPL
Trigger: CAGGGGCGCAGGCGCAGTAGTGTGATCCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGTCCTGCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 72 bp CTCCCTCCGCAGCCAAGCAGGACAACCCAACCCACGTaGTTAGGGACTGGCCAGGGGATCACACTACTGCGC +
Preference number: 6 (lower is better)
Translates to: LPPQPSRTTQPT*LGTGQGITLLR
Trigger: GCGCAGTAGTGTGATCCCCTGGCCAGTCCCTAAGCACGTGGGTTGGGTTGTCCTGCTTGGCTGCGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 72 bp TTTGTATTCGGCGGGAAACCCGGCCGAAGAGGGAGCTaGAAAGGACTCCGGAATCCGGCCGTAATTCCAGCC +
Preference number: 6 (lower is better)
Translates to: FVFGGKPGRRGS*KGLRNPAVIPA
Trigger: GGCTGGAATTACGGCCGGATTCCGGAGTCCTTTCCAGCTCCCTCTTCGGCCGGGTTTCCCGCCGAATACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS CCA 72 bp ACCCTAGGACAACAGACACAGATATGTCGCCAAGCCTaGCGTGTCTGGGTACCCACCAGATCTTCGGCACTG +
Preference number: 6 (lower is better)
Translates to: TLGQQTQICRQA*RVWVPTRSSAL
Trigger: CAGTGCCGAAGATCTGGTGGGTACCCAGACACGCCAGGCTTGGCGACATATCTGTGTCTGTTGTCCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555252.5
ENST00000650853.1
CDS CAA 72 bp ATTGGCGGAAAGAAAGAGCCAGTTCACAGTGCGCCTTaGTATTCGGCGGGAAACCCGGCCGAAGAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: IGGKKEPVHSAP*YSAGNPAEEGA
Trigger: AGCTCCCTCTTCGGCCGGGTTTCCCGCCGAATACAAAGGCGCACTGTGAACTGGCTCTTTCTTTCCGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 72 bp GGAAATGATTGGCGGAAAGAAAGAGCCAGTTCACAGTaGGCCTTTGTATTCGGCGGGAAACCCGGCCGAAGA +
Preference number: 6 (lower is better)
Translates to: GNDWRKERASSQ*AFVFGGKPGRR
Trigger: TCTTCGGCCGGGTTTCCCGCCGAATACAAAGGCGCACTGTGAACTGGCTCTTTCTTTCCGCCAATCATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545908.6
CDS GCA 72 bp TGGTTTCGGCAACACACTTCAGACGAGAAGTGCAGATaGGCCCACTACTCCCTTGCAGCATGCACTTACCGT +
Preference number: 6 (lower is better)
Translates to: WFRQHTSDEKCR*AHYSLAACTYR
Trigger: ACGGTAAGTGCATGCTGCAAGGGAGTAGTGGGCGCATCTGCACTTCTCGTCTGAAGTGTGTTGCCGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS CCA 72 bp CTGCAATGTGTCATCAACTCTGAACCCCAAGCCTCCTaGGGCTTCAGCAGAGGGAGTCTAACCTCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: LQCVINSEPQAS*GFSRGSLTSPV
Trigger: TACAGGAGAGGTTAGACTCCCTCTGCTGAAGCCCCAGGAGGCTTGGGGTTCAGAGTTGATGACACATTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556284.1
CDS CAA 72 bp CTTCAGACGAGAAGTGCAGATGCGCCCACTACTCCCTaGCAGCATGCACTTACCGTTCCTACTAAGGGGTAC +
Preference number: 6 (lower is better)
Translates to: LQTRSADAPTTP*QHALTVPTKGY
Trigger: GTACCCCTTAGTAGGAACGGTAAGTGCATGCTGCAAGGGAGTAGTGGGCGCATCTGCACTTCTCGTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS GCA 72 bp TTCAGACGAGAAGTGCAGATGCGCCCACTACTCCCTTaGAGCATGCACTTACCGTTCCTACTAAGGGGTACA +
Preference number: 6 (lower is better)
Translates to: FRREVQMRPLLP*SMHLPFLLRGT
Trigger: TGTACCCCTTAGTAGGAACGGTAAGTGCATGCTGCAAGGGAGTAGTGGGCGCATCTGCACTTCTCGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS CAA 72 bp AGGGAGAGTGGGAGGGAGGTTAAAAACGGTGAAGGCTaGACAGTGACTAATGTTCCTGGCAGCTCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: RESGREVKNGEG*TVTNVPGSSAS
Trigger: AGACGCTGAGCTGCCAGGAACATTAGTCACTGTCAAGCCTTCACCGTTTTTAACCTCCCTCCCACTCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS CAA 90 bp CAAACGAGGCATGCGCAGGGAAGGGAAAGTGGTCCACTTTACAAGTaGAAGACAGGTATTCACCATGCGCAAGTGAGATCACAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: QTRHAQGRESGPLYK*KTGIHHAQVRSQAA
Trigger: TGCAGCCTGTGATCTCACTTGCGCATGGTGAATACCTGTCTTCAACTTGTAAAGTGGACCACTTTCCCTTCCCTGCGCATGCCTCGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS CAA 90 bp AAGCACGGTAGGGAGAGTGGGAGGGAGGTTAAAAACGGTGAAGGCTaGACAGTGACTAATGTTCCTGGCAGCTCAGCGTCTACATCTGAA +
Preference number: 6 (lower is better)
Translates to: KHGRESGREVKNGEG*TVTNVPGSSASTSE
Trigger: TTCAGATGTAGACGCTGAGCTGCCAGGAACATTAGTCACTGTCAAGCCTTCACCGTTTTTAACCTCCCTCCCACTCTCCCTACCGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS TCA 72 bp TTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTTaGTGGTTTCGGCAACACACTTCAGACGAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: FWAVNSAHLAFA*WFRQHTSDEKC
Trigger: GCACTTCTCGTCTGAAGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS CCA 72 bp CAAAGGGCAAACGAGGCATGCGCAGGGAAGGGAAAGTaGTCCACTTTACAAGTTGAAGACAGGTATTCACCA +
Preference number: 6 (lower is better)
Translates to: QRANEACAGKGK*STLQVEDRYSP
Trigger: TGGTGAATACCTGTCTTCAACTTGTAAAGTGGACCACTTTCCCTTCCCTGCGCATGCCTCGTTTGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS CAA 72 bp CTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTaGATGGTTTCGGCAACACACTTCAGACGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: LLGSELCSLGIC*MVSATHFRREV
Trigger: CACTTCTCGTCTGAAGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS CAA 90 bp TCCAATTTTCTTCTGGGCAGTGAACTCTGCTCACTTGGCATTTGCTaGATGGTTTCGGCAACACACTTCAGACGAGAAGTGCAGATGCGC +
Preference number: 6 (lower is better)
Translates to: SNFLLGSELCSLGIC*MVSATHFRREVQMR
Trigger: GCGCATCTGCACTTCTCGTCTGAAGTGTGTTGCCGAAACCATCAAGCAAATGCCAAGTGAGCAGAGTTCACTGCCCAGAAGAAAATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557370.3
CDS TCA 72 bp CGCGCCTTGCAAGTGTGCTTTATAACCACTCTGCTCTaGCTGTCCAAAACCAATTCAAGAAGGCAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: RALQVCFITTLL*LSKTNSRRQES
Trigger: TGACTCCTGCCTTCTTGAATTGGTTTTGGACAGTCAGAGCAGAGTGGTTATAAAGCACACTTGCAAGGCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554677.1
CDS CAA 72 bp CAGTCATTGAGGTCACCTCTAGCAAGTTTCCCAGCATaGATGCTAGTCAATCCATCCACATCCTTCTCGGGT +
Preference number: 6 (lower is better)
Translates to: QSLRSPLASFPA*MLVNPSTSFSG
Trigger: ACCCGAGAAGGATGTGGATGGATTGACTAGCATCAATGCTGGGAAACTTGCTAGAGGTGACCTCAATGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000545908.6
ENST00000554768.6
ENST00000555252.5
ENST00000555709.7
ENST00000557370.3
ENST00000557539.1
ENST00000650853.1
ENST00000651537.1
ENST00000652179.1
ENST00000652337.1
CDS CAA 72 bp GTCATCTTCCCTGTGACCTTACAGGACACTCCTCCATaGTCTAAAAGCTTCTTATTGCCAGTAAGACGGGCG +
Preference number: 6 (lower is better)
Translates to: VIFPVTLQDTPP*SKSFLLPVRRA
Trigger: CGCCCGTCTTACTGGCAATAAGAAGCTTTTAGACAATGGAGGAGTGTCCTGTAAGGTCACAGGGAAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 72 bp CAGCTGAAGGTGAAGGTGAAGTTGAACCTTATTCAGTaGTGTAGCCCAAGGCCTGGCATTGTGCTGGATACA +
Preference number: 6 (lower is better)
Translates to: QLKVKVKLNLIQ*CSPRPGIVLDT
Trigger: TGTATCCAGCACAATGCCAGGCCTTGGGCTACACAACTGAATAAGGTTCAACTTCACCTTCACCTTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS CAA 90 bp ACGTCTGAAAATATCCAGATAGATTCGGCTAGGTGTGAGCACATGTaGAAAGTCATCTTCCCTGTGACCTTACAGGACACTCCTCCATTG +
Preference number: 6 (lower is better)
Translates to: TSENIQIDSARCEHM*KVIFPVTLQDTPPL
Trigger: CAATGGAGGAGTGTCCTGTAAGGTCACAGGGAAGATGACTTTCAACATGTGCTCACACCTAGCCGAATCTATCTGGATATTTTCAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 72 bp AATATCCAGATAGATTCGGCTAGGTGTGAGCACATGTaGAAAGTCATCTTCCCTGTGACCTTACAGGACACT +
Preference number: 6 (lower is better)
Translates to: NIQIDSARCEHM*KVIFPVTLQDT
Trigger: AGTGTCCTGTAAGGTCACAGGGAAGATGACTTTCAACATGTGCTCACACCTAGCCGAATCTATCTGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 90 bp ATGTTGAAAGTCATCTTCCCTGTGACCTTACAGGACACTCCTCCATaGTCTAAAAGCTTCTTATTGCCAGTAAGACGGGCGTTAAGTCTA +
Preference number: 6 (lower is better)
Translates to: MLKVIFPVTLQDTPP*SKSFLLPVRRALSL
Trigger: TAGACTTAACGCCCGTCTTACTGGCAATAAGAAGCTTTTAGACAATGGAGGAGTGTCCTGTAAGGTCACAGGGAAGATGACTTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS TCA 72 bp GTTGCTCCGTTAAAGATTGTTCCTTTCTTGGATCTATaGGGACGTACGCAAGTTTTGCCCTATTGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: VAPLKIVPFLDL*GRTQVLPYCSV
Trigger: CACAGAACAATAGGGCAAAACTTGCGTACGTCCTCATAGATCCAAGAAAGGAACAATCTTTAACGGAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652503.1
CDS CAA 90 bp CCTGTGACCTTACAGGACACTCCTCCATTGTCTAAAAGCTTCTTATaGCCAGTAAGACGGGCGTTAAGTCTAGTTCTCATTCTTTTCATA +
Preference number: 6 (lower is better)
Translates to: PVTLQDTPPLSKSFL*PVRRALSLVLILFI
Trigger: TATGAAAAGAATGAGAACTAGACTTAACGCCCGTCTTACTGGCAATAAGAAGCTTTTAGACAATGGAGGAGTGTCCTGTAAGGTCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS TCA 72 bp GAAGTCATACACCCACTTTTAGAGATGCCCACAGGATaGAGATGTTACTCAAATCATCTGGAACTTGTGATC +
Preference number: 6 (lower is better)
Translates to: EVIHPLLEMPTG*RCYSNHLELVI
Trigger: GATCACAAGTTCCAGATGATTTGAGTAACATCTTCATCCTGTGGGCATCTCTAAAAGTGGGTGTATGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS TCA 72 bp GATAAAGCAATGGTACTCTTGATGTTCTCTGCAAATTaGAGTCATACACCCACTTTTAGAGATGCCCACAGG +
Preference number: 6 (lower is better)
Translates to: DKAMVLLMFSAN*SHTPTFRDAHR
Trigger: CCTGTGGGCATCTCTAAAAGTGGGTGTATGACTTCAATTTGCAGAGAACATCAAGAGTACCATTGCTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 72 bp TTACAGGACACTCCTCCATTGTCTAAAAGCTTCTTATaGCCAGTAAGACGGGCGTTAAGTCTAGTTCTCATT +
Preference number: 6 (lower is better)
Translates to: LQDTPPLSKSFL*PVRRALSLVLI
Trigger: AATGAGAACTAGACTTAACGCCCGTCTTACTGGCAATAAGAAGCTTTTAGACAATGGAGGAGTGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 90 bp CTGAAACCAATATTTGACATTCTAGGCTTACCCATGTTAGCCATCTaGGACCAATTGATACTTTCACCTGAATTGGACCATTCATGGTTT +
Preference number: 6 (lower is better)
Translates to: LKPIFDILGLPMLAI*DQLILSPELDHSWF
Trigger: AAACCATGAATGGTCCAATTCAGGTGAAAGTATCAATTGGTCCAAGATGGCTAACATGGGTAAGCCTAGAATGTCAAATATTGGTTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650853.1
CDS CAA 72 bp ATATTTGACATTCTAGGCTTACCCATGTTAGCCATCTaGGACCAATTGATACTTTCACCTGAATTGGACCAT +
Preference number: 6 (lower is better)
Translates to: IFDILGLPMLAI*DQLILSPELDH
Trigger: ATGGTCCAATTCAGGTGAAAGTATCAATTGGTCCAAGATGGCTAACATGGGTAAGCCTAGAATGTCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553405.1
ENST00000650853.1