RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000148824

Ensembl transcript IDs: ENST00000317502.11, ENST00000432508.3, ENST00000460848.5, ENST00000473735.1, ENST00000477902.6, ENST00000492266.1, ENST00000495014.5, ENST00000498790.5

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGGAAGCCTGGTGTCCACTCCCACCTGCTTGGGCCCTGCAACTaGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACA +
Preference number: 1 (lower is better)
Translates to: TGKPGVHSHLLGPCN*GPWSWPGCGAPEST
Trigger: TGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACACCAGGCTTCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR TCA 90 bp AGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTaGCGGCCTGCTCAGTGGAGCCAGGAGCTAACTCAGACCCCAAAG +
Preference number: 1 (lower is better)
Translates to: RPRNRAWVSAWWAGS*RPAQWSQELTQTPK
Trigger: CTTTGGGGTCTGAGTTAGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp AGGCCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTaGACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: RPGVSTAHAGRPSSH*TAKPCAGRPPQPCP
Trigger: AGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 90 bp CTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTaGCAGCTGACGGCCTGCTCAGTGGAGCCAGGAGCTAACTCAGAC +
Preference number: 1 (lower is better)
Translates to: LFQASEQGLGIRVVG*QLTACSVEPGANSD
Trigger: GTCTGAGTTAGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp TGTGGGACGGTCAGGCCACCACCGCAAAGAGGCAGCCGGAGCTTCTaGACAGGATGTCCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCA +
Preference number: 1 (lower is better)
Translates to: CGTVRPPPQRGSRSF*TGCPWPQVLQHLSP
Trigger: TGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGGTGGTGGCCTGACCGTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp GAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTaGTCAGTGGAGCCAGGAGCTAACTCAGACCCCAAAGCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: EQGLGIRVVGWQLTA*SVEPGANSDPKASR
Trigger: CCTGCTTGCTTTGGGGTCTGAGTTAGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 90 bp AGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTaGGAAGCCTGGTGTCCACTCCCACCTGCTTGGGCCCTGCAACTG +
Preference number: 1 (lower is better)
Translates to: SSGRTKHAELLRDVH*EAWCPLPPAWALQL
Trigger: CAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR TCA 90 bp CTTCCCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTaGGAGGTCTTGGGTCTGCCACGTTCTCTAGCTCTCCAGTCACCC +
Preference number: 1 (lower is better)
Translates to: LPSPASLGHPPWAQH*EVLGLPRSLALQSP
Trigger: GGGTGACTGGAGAGCTAGAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp AAGAGGCCTGAGCAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTaGTCAGGGACGTCCACTGGGAAGCCTGGTGTCCACTCCCACCTG +
Preference number: 1 (lower is better)
Translates to: KRPEQEAPGEPSMRS*SGTSTGKPGVHSHL
Trigger: CAGGTGGGAGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGCTCAGGCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR GCA 90 bp GAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTaGAGCACCTTAGTCCATACTACCAGCCCCACCCACCTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: EAAGASAQDVPGPRS*STLVHTTSPTHLPS
Trigger: GGAAGGAAGGTGGGTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 90 bp CCACCACCGCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTaGCCCCAGGTCCTGCAGCACCTTAGTCCATACTACCAGCCCCAC +
Preference number: 1 (lower is better)
Translates to: PPPQRGSRSFCTGCP*PQVLQHLSPYYQPH
Trigger: GTGGGGCTGGTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 90 bp ACACCTGTGTTAAGACCAGCCCTCTGCTTCCCAGTCCCGCCAGCCTaGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGC +
Preference number: 1 (lower is better)
Translates to: TPVLRPALCFPVPPA*GILHGLSTERSWVC
Trigger: GCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGGGAAGCAGAGGGCTGGTCTTAACACAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp CATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAACCAAGCATaGGGAGCTGCTCAGGGACGTCCACTGGGAAGCCTGGTGTCCACT +
Preference number: 1 (lower is better)
Translates to: HFSRGLSRKLRENQA*GAAQGRPLGSLVST
Trigger: AGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR TCA 90 bp ACCGGAGCCCCCTCAACTTTGCAGATGCCCACCTGGAAAATGGGCTaGGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATG +
Preference number: 1 (lower is better)
Translates to: TGAPSTLQMPTWKMG*AAPDPHTPQHCKLM
Trigger: CATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTCCAGGTGGGCATCTGCAAAGTTGAGGGGGCTCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp CAACCTGAATACTTCCTGCCCCAGGCGGTCAGGGTTATGGCACGATaGAGGTGGCACTCAGGGGCTAACTTCAGGCTGATGAGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: QPEYFLPQAVRVMAR*RWHSGANFRLMSVW
Trigger: CCACACACTCATCAGCCTGAAGTTAGCCCCTGAGTGCCACCTGCATCGTGCCATAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp AGCCCCCTCAACTTTGCAGATGCCCACCTGGAAAATGGGCTGAGCTaGACCAGACCCTCACACACCACAGCACTGCAAGCTGATGGAATG +
Preference number: 1 (lower is better)
Translates to: SPLNFADAHLENGLS*TRPSHTTALQADGM
Trigger: CATTCCATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTCCAGGTGGGCATCTGCAAAGTTGAGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 90 bp ATAGCTTTAACTCCTTCTGAGACAGCATCCATTTCTCAAGAGGCCTaGGCAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGG +
Preference number: 1 (lower is better)
Translates to: IALTPSETASISQEA*AGSSGRTKHAELLR
Trigger: CCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAGGAGTTAAAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 90 bp GGACTGCAAGACACTGGACCGAAAGCCTCCAACACAAACCCTAGCTaGCAACCTGCTCATTTCTTAGGTTTCACTGGTGAGAGCAGCTTT +
Preference number: 1 (lower is better)
Translates to: GLQDTGPKASNTNPS*QPAHFLGFTGESSF
Trigger: AAAGCTGCTCTCACCAGTGAAACCTAAGAAATGAGCAGGTTGGCAGCTAGGGTTTGTGTTGGAGGCTTTCGGTCCAGTGTCTTGCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 90 bp GAATGTTCCAGTTATGATGGACACTTCGTGATCTGCAATGACTGTTaGTTCAGCACATTAGCATCTGACACAGCCAACCTGAATACTTCC +
Preference number: 1 (lower is better)
Translates to: ECSSYDGHFVICNDC*FSTLASDTANLNTS
Trigger: GGAAGTATTCAGGTTGGCTGTGTCAGATGCTAATGTGCTGAATCAACAGTCATTGCAGATCACGAAGTGTCCATCATAACTGGAACATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGAGGAGGGGTTCTCCCTaGCCCCCGCCGTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTRRGSP*PPPWPW
Trigger: CCAAGGCCACGGCGGGGGGCAGGGAGAACCCCTCCT...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCAGGGGTCTCTACTaGCCATGCCGGGCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTARGLY*PCRAAF
Trigger: GAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGC...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CAA 90 bp GAGGCCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATaGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCC +
Preference number: 2 (lower is better)
Translates to: EARGLYCPCRAAFQS*HSKAMCRASPSTLP
Trigger: GGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGAGCTTCTGGACCGGGTaGGCTGTCTTGAGCCTCAAC +
Preference number: 2 (lower is better)
Translates to: GSLELARLWGAREHSTLVSFWTG*AVLSLN
Trigger: GTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCT...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR-3UTR GCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGCACAGCAAAGCCATGTaGAGGGCGTCCCCCTCAACC +
Preference number: 2 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTHSKAM*RASPST
Trigger: GGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTG...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp CAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGTGGTGGAGGCTGCTGTaGGACGGTCAGGCCACCACC +
Preference number: 2 (lower is better)
Translates to: QPGASSMGSALRGLGSATWWRLL*DGQATT
Trigger: GGTGGTGGCCTGACCGTCCCACAGCAGCCTCCACCA...CGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGCCGGGTGAGCTGTCTTaGGCCTCAACCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGPGELS*ASTTQV
Trigger: GACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGG...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR-3UTR TCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGAGCTTCTGGACCGGGTaGGCTGTCTTGAGCCTCAAC +
Preference number: 2 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTSFWTG*AVLSLN
Trigger: GTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCT...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGGTGTCCACTCCCACCTaGTTGGGCCCTGCAACTGGG +
Preference number: 2 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGVSTPT*LGPATG
Trigger: CCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACAC...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR-3UTR TCA 90 bp AGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAGCACCATGCCCCAGGGCACTaGGGGGCGAAGCCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: RRDMEWRWTVTTRTCLQHHAPGH*GAKPVL
Trigger: AAGCACTGGCTTCGCCCCTCAGTGCCCTGGGGCATG...GTGCTGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp AACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCGCCCTGGTCTCTACTGCCCATaGCGGGCGGCCTTCCAGTCA +
Preference number: 2 (lower is better)
Translates to: NQALLSSSRALSHRRQRPGLYCP*RAAFQS
Trigger: TGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACC...AGGGCGCTGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp AGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAGCACGGCAGCCGGAGCTTCTaGACAGGATGTCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: RRDMEWRWTVTTRTCLQHGSRSF*TGCPWP
Trigger: GGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCC...GTGCTGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp CCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCTCAGGGACGTCCACTaGGAAGCCTGGTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: PGVSTAHAGRPSSHCTAKLRDVH*EAWCPL
Trigger: GAGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAG...CTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp GCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCACCTTAGTCCTTGGGCTCTGCTGCTaGGAGTCTCTGGTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: AGASAQDVPGPRSCSTLVLGLCC*ESLVCV
Trigger: GACACAGACCAGAGACTCCCAGCAGCAGAGCCCAAG...GACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CAA 90 bp CCCCAGCTGGCCTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTaGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCCAGGGCACTA +
Preference number: 2 (lower is better)
Translates to: PQLAWVLAWVRIWKL*AGLNQALLSSSRAL
Trigger: TAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGCCAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp CAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGGACTCAACCAAGCACTaGTCTCTAGCTCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: QPGASSMGSALRGLGSATDSTKH*SLAPGH
Trigger: GTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTC...CGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp TCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCTGGAGGAGCTGGCCAGGCTGTaGGGCGCCAGAGAGCACAGC +
Preference number: 2 (lower is better)
Translates to: SSRTQAVDPFRCTIMGLEELARL*GAREHS
Trigger: GCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTC...CTCCAGCCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp CTCTCTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCCCGGGTGAGCTGTCTTaGGCCTCAACCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: LSDGSKPLTCCRTARHWTPGELS*ASTTQV
Trigger: GACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGG...GGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp GGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCCTAGGACACAGGCTGTaGACCCCTTCAGGTGCACTA +
Preference number: 2 (lower is better)
Translates to: GLGEDLEAVGRTQPSTALLGHRL*TPSGAL
Trigger: TAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAG...GAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp CAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTCCAAGCATGCGGAGCTaGTCAGGGACGTCCACTGGG +
Preference number: 2 (lower is better)
Translates to: QVHIQGSHSSACSQGTATPSMRS*SGTSTG
Trigger: CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGG...AGTTGCTGTGCCCTGAGAACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp TCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCTGGAGGTGCTTGGGCTCTGCTaGTGGGAGTCTCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: SSRTQAVDPFRCTIMGLEVLGLC*WESLVC
Trigger: ACAGACCAGAGACTCCCAGCAGCAGAGCCCAAGCAC...CTCCAGCCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp AACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCGCCCTCCTCAACTTTGCAGATaGCCACCTGGAAAATGGGCT +
Preference number: 2 (lower is better)
Translates to: NQALLSSSRALSHRRQRPPQLCR*PPGKWA
Trigger: AGCCCATTTTCCAGGTGGGCATCTGCAAAGTTGAGG...AGGGCGCTGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAAGTCCACTGGGAAGCCTaGTGTCCACTCCCACCTGCT +
Preference number: 2 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGEVHWEA*CPLPPA
Trigger: AGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGAC...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR-3UTR CCA 90 bp GGACAGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAAGGACTGCAAGACACTaGACCGAAAGCCTCCAACAC +
Preference number: 2 (lower is better)
Translates to: GQERHGVALDSHDKDLPPRTARH*TESLQH
Trigger: GTGTTGGAGGCTTTCGGTCCAGTGTCTTGCAGTCCT...TGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp CAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTCCAGGAGGCAGGGGGTaGTCTGAGTCTCCTCACAGC +
Preference number: 2 (lower is better)
Translates to: QVHIQGSHSSACSQGTATPGGRG*SESPHS
Trigger: GCTGTGAGGAGACTCAGACCACCCCCTGCCTCCTGG...AGTTGCTGTGCCCTGAGAACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp CTTCCCTCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGGAATCCCACTACCCGTaGGCTAGAAGGTGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LPSSRTQAVDPFRCTIMGESHYP*ARRCSE
Trigger: CTCTGAGCACCTTCTAGCTCACGGGTAGTGGGATTC...CCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGAGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp TCTGCCACGTTCTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGGAGGGGTTAGCCTCGGGACTCAGTaGACACCAAAGTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: SATFSSSPVTHSSRVGGVSLGTQ*TPKSRP
Trigger: TGGTCTTGACTTTGGTGTCCACTGAGTCCCGAGGCT...AACCCCTCCTACCCTGGATGAGTGGGTGACTGGAGAGCTAGAGAACGTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp GACCCTCACACACCACAGCACTGCAAGCTGATGGAATGTTCCAGTTATGATGGACCAGTGCTTGGGCTCTaGTGCTGGGAGTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: DPHTPQHCKLMECSSYDGPVLGL*CWESLV
Trigger: GACCAGAGACTCCCAGCAGCAGAGCCCAAGCACTGG...TCCATCATAACTGGAACATTCCATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp GAAAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATAACCTGAATACTTCCTaGCCCAGGCGGTCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: ENGLSCTRPSHTTALQADNLNTS*PRRSGL
Trigger: TAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTT...ATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR GCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCGTGTCCACTCCCACCTaGTTGGGCCCTGCAACTGGG +
Preference number: 2 (lower is better)
Translates to: LSKSFELQVHIQGSHSSAVSTPT*LGPATG
Trigger: CCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACAC...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp TCTGCCACGTTCTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGGAGGGGTTGGAATGTTCCAGTTATaGTGGACACTTCGTGATCTG +
Preference number: 2 (lower is better)
Translates to: SATFSSSPVTHSSRVGGVGMFQL*WTLRDL
Trigger: CAGATCACGAAGTGTCCATCATAACTGGAACATTCC...AACCCCTCCTACCCTGGATGAGTGGGTGACTGGAGAGCTAGAGAACGTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp AACCAACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGTGCCAGCAATGCCCCTaGCCCAGTGAGCCCAGACGC +
Preference number: 2 (lower is better)
Translates to: NQHIPELSKSFELQVHIQCQQCP*PSEPRR
Trigger: GCGTCTGGGCTCACTGGGCCAGGGGCATTGCTGGCA...CTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATGTGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp TCTGCCACGTTCTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGGAGGGGTTAGCTTTAACTCCTTCTaGGACAGCATCCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: SATFSSSPVTHSSRVGGVSFNSF*DSIHFS
Trigger: TGAGAAATGGATGCTGTCTCAGAAGGAGTTAAAGCT...AACCCCTCCTACCCTGGATGAGTGGGTGACTGGAGAGCTAGAGAACGTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR TCA 90 bp GAAAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATATCTGCAATGACTGTTaGTTCAGCACATTAGCATCT +
Preference number: 2 (lower is better)
Translates to: ENGLSCTRPSHTTALQADICNDC*FSTLAS
Trigger: AGATGCTAATGTGCTGAATCAACAGTCATTGCAGAT...ATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR-3UTR CCA 90 bp AACCAACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGCCTGGGTGAGGATCTaGAAGCTGTTGGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: NQHIPELSKSFELQVHIQAWVRI*KLLAGL
Trigger: GAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGC...CTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATGTGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 72 bp GCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTaGCAGCTGACGGCCTGCTCAGTGGAGCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: ASEQGLGIRVVG*QLTACSVEPGA
Trigger: AGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp GGACGTCCACTGGGAAGCCTGGTGTCCACTCCCACCTaGTTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: GRPLGSLVSTPT*LGPATGVPGAG
Trigger: GCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR CCA 72 bp CCGCCGTGGCCTTGGGATCTCACCCTCTCCATGTCCTaGGGACAGCCTCGCCCTCAGCCGGACTGCATCCCT +
Preference number: 3 (lower is better)
Translates to: PPWPWDLTLSMS*GQPRPQPDCIP
Trigger: AGGGATGCAGTCCGGCTGAGGGCGAGGCTGTCCCCAGGACATGGAGAGGGTGAGATCCCAAGGCCACGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp AGTCACCCACTCATCCAGGGTAGGAGGGGTTCTCCCTaGCCCCCGCCGTGGCCTTGGGATCTCACCCTCTCC +
Preference number: 3 (lower is better)
Translates to: SHPLIQGRRGSP*PPPWPWDLTLS
Trigger: GGAGAGGGTGAGATCCCAAGGCCACGGCGGGGGGCAGGGAGAACCCCTCCTACCCTGGATGAGTGGGTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 72 bp CCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTaGGAGGTCTTGGGTCTGCCACGTTCTCTAGCTCTC +
Preference number: 3 (lower is better)
Translates to: PASLGHPPWAQH*EVLGLPRSLAL
Trigger: GAGAGCTAGAGAACGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp GAGCAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTaGTCAGGGACGTCCACTGGGAAGCCTGGTGTCCAC +
Preference number: 3 (lower is better)
Translates to: EQEAPGEPSMRS*SGTSTGKPGVH
Trigger: GTGGACACCAGGCTTCCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR GCA 72 bp CTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTaGTCAGTGGAGCCAGGAGCTAACTCAGACCCCAAA +
Preference number: 3 (lower is better)
Translates to: LGIRVVGWQLTA*SVEPGANSDPK
Trigger: TTTGGGGTCTGAGTTAGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 72 bp AGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTaGGAAGCCTGGTGTCCACTCCCACCTGCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: RTKHAELLRDVH*EAWCPLPPAWA
Trigger: GGCCCAAGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR TCA 72 bp GACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTaGGCCTCAACCACCCAGGTCAGGAGGTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: DQHGASGPGELS*ASTTQVRRSGR
Trigger: CCTCCCAGACCTCCTGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR GCA 72 bp GTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTaGACAGCAAAGCCATGTGCAGGGCGTCCCCCTCAA +
Preference number: 3 (lower is better)
Translates to: VSTAHAGRPSSH*TAKPCAGRPPQ
Trigger: TTGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp AGAAGGTGCTCAGAGGCCAGGGGTCTCTACTGCCCATaGCGGGCGGCCTTCCAGTCATTGCACAGCAAAGCC +
Preference number: 3 (lower is better)
Translates to: RRCSEARGLYCP*RAAFQSLHSKA
Trigger: GGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGCCTCTGAGCACCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp TACTTCCTGCCCCAGGCGGTCAGGGTTATGGCACGATaGAGGTGGCACTCAGGGGCTAACTTCAGGCTGATG +
Preference number: 3 (lower is better)
Translates to: YFLPQAVRVMAR*RWHSGANFRLM
Trigger: CATCAGCCTGAAGTTAGCCCCTGAGTGCCACCTGCATCGTGCCATAACCCTGACCGCCTGGGGCAGGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 72 bp CAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTaGCCCCAGGTCCTGCAGCACCTTAGTCCATACTAC +
Preference number: 3 (lower is better)
Translates to: QRGSRSFCTGCP*PQVLQHLSPYY
Trigger: GTAGTATGGACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 72 bp CCCTCAACTTTGCAGATGCCCACCTGGAAAATGGGCTaGGCTGCACCAGACCCTCACACACCACAGCACTGC +
Preference number: 3 (lower is better)
Translates to: PSTLQMPTWKMG*AAPDPHTPQHC
Trigger: GCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTCCAGGTGGGCATCTGCAAAGTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 72 bp TCTCTCAGCCCCACTAATGCAGAATCCCACTACCCGTaGGCTAGAAGGTGCTCAGAGGCCAGGGGTCTCTAC +
Preference number: 3 (lower is better)
Translates to: SLSPTNAESHYP*ARRCSEARGLY
Trigger: GTAGAGACCCCTGGCCTCTGAGCACCTTCTAGCTCACGGGTAGTGGGATTCTGCATTAGTGGGGCTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CCA 72 bp AACCTGAATACTTCCTGCCCCAGGCGGTCAGGGTTATaGCACGATGCAGGTGGCACTCAGGGGCTAACTTCA +
Preference number: 3 (lower is better)
Translates to: NLNTSCPRRSGL*HDAGGTQGLTS
Trigger: TGAAGTTAGCCCCTGAGTGCCACCTGCATCGTGCCATAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 72 bp ACTCCTTCTGAGACAGCATCCATTTCTCAAGAGGCCTaGGCAGGAAGCTCCGGGAGAACCAAGCATGCGGAG +
Preference number: 3 (lower is better)
Translates to: TPSETASISQEA*AGSSGRTKHAE
Trigger: CTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
3UTR GCA 72 bp ACATTAGCATCTGACACAGCCAACCTGAATACTTCCTaGCCCAGGCGGTCAGGGTTATGGCACGATGCAGGT +
Preference number: 3 (lower is better)
Translates to: TLASDTANLNTS*PRRSGLWHDAG
Trigger: ACCTGCATCGTGCCATAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTTGGCTGTGTCAGATGCTAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR GCA 72 bp GACACTGGACCGAAAGCCTCCAACACAAACCCTAGCTaGCAACCTGCTCATTTCTTAGGTTTCACTGGTGAG +
Preference number: 3 (lower is better)
Translates to: DTGPKASNTNPS*QPAHFLGFTGE
Trigger: CTCACCAGTGAAACCTAAGAAATGAGCAGGTTGGCAGCTAGGGTTTGTGTTGGAGGCTTTCGGTCCAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR TCA 72 bp AGTTATGATGGACACTTCGTGATCTGCAATGACTGTTaGTTCAGCACATTAGCATCTGACACAGCCAACCTG +
Preference number: 3 (lower is better)
Translates to: SYDGHFVICNDC*FSTLASDTANL
Trigger: CAGGTTGGCTGTGTCAGATGCTAATGTGCTGAATCAACAGTCATTGCAGATCACGAAGTGTCCATCATAACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCTGGTGGGCTGGCAGCTaGCGGCCTGCTCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASEQGLGIRVVGWQLTACWWAGS*RPAQWS
Trigger: GCTCCACTGAGCAGGCCGTCAGCTGCCAGCCCACCA...GCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTGCGGGCCTCCGGCACTaGGGGCTTCCGGCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQAVGRQRAQHPSDQHGAAGLRH*GLPALQ
Trigger: TTGGAGCGCCGGAAGCCCGCAGTGCCGGAGGCCCGC...AGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR CCA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGAGCTGGCCAGGCTGTaGGGCGCCAGAGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSELARL*GAREHS
Trigger: GCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTC...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGAAACGCTCCCGCAGCTaGCCTCCTCTGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTKRSRS*PPLRRC
Trigger: GCAGCGGCGCAGAGGAGGTCAGCTGCGGGAGCGTTT...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCGCAAAGAGGGGCCACTaGGCACCAGGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTAKRGH*APGPWW
Trigger: CCACCAGGGCCCTGGTGCTCAGTGGCCCCTCTTTGC...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGGCTGCGACCCGCCTCTaGGGTTCCGGCGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLAATRL*GSGAAG
Trigger: GCCCGCAGCGCCGGAACCTCAGAGGCGGGTCGCAGC...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGCTGAGGTTCCGGCGCTaGGGGCCTCCGGCACTGCGG +
Preference number: 4 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGLRFRR*GPPALR
Trigger: CCGCAGTGCCGGAGGCCCGCAGCGCCGGAACCTCAG...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR CCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGCTTGGGCCCTGCAACTaGGGTCCCTGGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVLGPCN*GPWSWP
Trigger: TGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAAG...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGTGGCTTTCCCTTTCCTaGGGTGCTGCCTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVWLSLS*GAASGG
Trigger: CCCTCCGGAGGCAGCACCTCAGGAAAGGGAAAGCCA...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTCGTTACCCGTGCCCGTaGGCACCTTCACCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSRYPCP*APSPSA
Trigger: CGCAGAAGGTGAAGGTGCTCACGGGCACGGGTAACG...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCCATCCCTCCTGGGCCTaGGCCTCGGGACTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTHPSWA*ASGLSG
Trigger: TCCACTGAGTCCCGAGGCTCAGGCCCAGGAGGGATG...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCCGTCCCCCTCAACCCTaGCCTGAACATGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTRPPQP*PEHAPG
Trigger: CCCTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACG...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTGCCAGGGGTCTCTACTaGCCATGCCGGGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GQAVGRQRAQHPSDQHGAARGLY*PCRAAF
Trigger: GAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGGC...AGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGCCTCCCGTCCACACTaGCAGCAATGCCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PVPPAWGILHGLSTERSWASRPH*QQCPWP
Trigger: GGGCCAGGGGCATTGCTGGCAGTGTGGACGGGAGGC...CCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACATCACAGCTCTGGTaGTCCCAGGCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVTSQLW*SQARHP
Trigger: TGGGTGGCGAGCCTGGGATCACCAGAGCTGTGATGT...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCCGTTACCCGTGCCCGTaGGCACCTTCACCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTRYPCP*APSPSA
Trigger: CGCAGAAGGTGAAGGTGCTCACGGGCACGGGTAACG...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGGGTTCTGGCCTGGGTaGGGATCTGGAAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSGFWPG*GSGSCW
Trigger: CCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCC...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCGTGTCCACTCCCACCTaGTTGGGCCCTGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTVSTPT*LGPATG
Trigger: CCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACAC...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGGGCCCTGGTGGAGGCTaGTGTGGGACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QPGASSMGSALRGLGSATGPGGG*CGTVRP
Trigger: TGGCCTGACCGTCCCACAGCAGCCTCCACCAGGGCC...CGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGTCTTCAGCCCTCCTCTaGGCCGCTGCGACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGSSALL*AAATRL
Trigger: GAGGCGGGTCGCAGCGGCGCAGAGGAGGGCTGAAGA...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR CCA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGTCCACTGGGAAGCCTaGTGTCCACTCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSVHWEA*CPLPPA
Trigger: AGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGAC...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGCTCAGGGACGTCCACTaGGAAGCCTGGTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVLRDVH*EAWCPL
Trigger: GAGTGGACACCAGGCTTCCCAGTGGACGTCCCTGAG...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGCCAGTCCCGCCAGCCTaGGGCATCCTCCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQPVPPA*GILHGL
Trigger: GAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGG...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTCAGAGGGTTGCGGCCTaGAAGTGGGATCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: GQAVGRQRAQHPSDQHGAQRVAA*KWDPGI
Trigger: GATGCCCGGATCCCACTTTCAGGCCGCAACCCTCTG...AGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTAGCCCAAGGGTTTCCTaGAACAGAGGGTTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSSPRVS*NRGLRP
Trigger: AGGCCGCAACCCTCTGTTTCAGGAAACCCTTGGGCT...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp CTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCGTGCACGCATTTCCCTaGAGGCAGCCCCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: LELARLWGAREHSTLVTSVHAFP*RQPLLR
Trigger: CCGAAGAAGGGGCTGCCTTCAGGGAAATGCGTGCAC...GCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGACAGGAAGTCACGGGCTaGCGCAGGATAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRQEVTG*RRIVRL
Trigger: CAGCCTAACTATCCTGCGGCAGCCCGTGACTTCCTG...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp GGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTCCAAGCATGCGGAGCTaGTCAGGGACGTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GQAVGRQRAQHPSDQHGAPSMRS*SGTSTG
Trigger: CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGG...AGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGCCCAAGGCACTACGGTaGACCTCACAGGCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVPKALR*TSQASK
Trigger: CTTACTGGCCTGTGAGGTGCACCGTAGTGCCTTGGG...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAAGGGTTATGGCACGATaGAGGTGGCACTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRRVMAR*RWHSGA
Trigger: AGCCCCTGAGTGCCACCTGCATCGTGCCATAACCCT...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTCCTCCTCTGCGCCGCTaGGACCCGCCTCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASPPLRR*DPPLRF
Trigger: GAACCTCAGAGGCGGGTCGCAGCGGCGCAGAGGAGG...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR CCA 90 bp CTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCTCTTCTTCAGCCCCTTaGCCATGTGGCCCGGGAACC +
Preference number: 4 (lower is better)
Translates to: LELARLWGAREHSTLVTSSSSAP*PCGPGT
Trigger: GGTTCCCGGGCCACATGGCCAAGGGGCTGAAGAAGA...GCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGGCGAAGCCAGTGCTTaGGCTCTGCTGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PVPPAWGILHGLSTERSWGEASA*ALLLGV
Trigger: GACTCCCAGCAGCAGAGCCCAAGCACTGGCTTCGCC...CCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp GCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCCTAGGACACAGGCTGTaGACCCCTTCAGGTGCACTA +
Preference number: 4 (lower is better)
Translates to: ASEQGLGIRVVGWQLTACLGHRL*TPSGAL
Trigger: TAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAG...GCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGTGCCAGCAATGCCCCTaGCCCAGTGAGCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQCQQCP*PSEPRR
Trigger: GCGTCTGGGCTCACTGGGCCAGGGGCATTGCTGGCA...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCCCAAGGGTTTCCTaGAACAGAGGGTTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTSPRVS*NRGLRP
Trigger: AGGCCGCAACCCTCTGTTTCAGGAAACCCTTGGGCT...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp CCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGAACTGCCAATCCCGCTaGAGAGGCCTCCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PFFGSSCSRPRNRAWVSANCQSR*RGLPGH
Trigger: GTGCCCAGGGAGGCCTCTTCAGCGGGATTGGCAGTT...CGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTGCTTCCGAAGAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGCCTGCAGCTTCAGGCTGCTCTaGATCTTCTTCAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ASEQGLGIRVVGWQLTACSFRLL*IFFSPL
Trigger: CAAGGGGCTGAAGAAGATGCAGAGCAGCCTGAAGCT...GCAGGCCGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGGAGGGGCGAAGCCAGTaGTTGGGCTCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLEGRSQ*LGSAAG
Trigger: CCCAGCAGCAGAGCCCAAGCACTGGCTTCGCCCCTC...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCAGGAGGGGTTCTCCCTaGCCCCCGCCGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGEDLEAVGRTQPSTALRRGSP*PPPWPW
Trigger: CCAAGGCCACGGCGGGGGGCAGGGAGAACCCCTCCT...GAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGTGGTGGAGGCTGCTGTaGGACGGTCAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLWWRLL*DGQATT
Trigger: GGTGGTGGCCTGACCGTCCCACAGCAGCCTCCACCA...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAATGGCACGATGCAGGTaGCACTCAGGGGCTAACTTC +
Preference number: 4 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRMARCR*HSGANF
Trigger: GAAGTTAGCCCCTGAGTGCCACCTGCATCGTGCCAT...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGAGGCGGTCAGGGTTATaGCACGATGCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTRRSGL*HDAGGT
Trigger: AGTGCCACCTGCATCGTGCCATAACCCTGACCGCCT...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CAA 72 bp GGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATaGCACAGCAAAGCCATGTGCAGGGCGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GLYCPCRAAFQS*HSKAMCRASPS
Trigger: TGAGGGGGACGCCCTGCACATGGCTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTTGGCTTTCCCTTTCCTaGGGTGCTGCCTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASWLSLS*GAASGG
Trigger: CCCTCCGGAGGCAGCACCTCAGGAAAGGGAAAGCCA...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGGCCGCTCAGAGACCTaGATTTTGGACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRGRSET*ILDITA
Trigger: AGCTGTGATGTCCAAAATTCAGGTCTCTGAGCGGCC...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCATTTCTCAAGAGGCCTaGGCAGGAAGCTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLELARLWGAREHSTLVTISQEA*AGSSGR
Trigger: TCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAAT...GGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp TCTGCCACGTTCTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGGAGGGGTTGCAGCTGACCTCCTCTaGGCCGCTGCGACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SATFSSSPVTHSSRVGGVAADLL*AAATRL
Trigger: GAGGCGGGTCGCAGCGGCGCAGAGGAGGTCAGCTGC...AACCCCTCCTACCCTGGATGAGTGGGTGACTGGAGAGCTAGAGAACGTGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTTCCCTTTCCTGAGGTaGTGCCTCCGGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GQAVGRQRAQHPSDQHGAFPFLR*CLRREL
Trigger: CAACTCCCTCCGGAGGCAGCACCTCAGGAAAGGGAA...AGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCACGCCCTCAGCCGGACTaGATCCCTCCTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSRPQPD*IPPGPE
Trigger: CTCAGGCCCAGGAGGGATGCAGTCCGGCTGAGGGCG...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGTGGCAGCTGACGGCCTaGTCAGTGGAGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGVSTAHAGRPSSHCTAKWQLTA*SVEPGA
Trigger: AGCTCCTGGCTCCACTGAGCAGGCCGTCAGCTGCCA...CTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGGGGATCACACAGTTCTaGCTGTTCTCAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTGITQF*LFSGHS
Trigger: GCTGTGCCCTGAGAACAGGCAGAACTGTGTGATCCC...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTTCCTCCCCGACCAGGTaGTCCAGCACCGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASSSPTR*SSTVPH
Trigger: GTGTGGAACGGTGCTGGACCACCTGGTCGGGGAGGA...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCAGAGCTGGCCAGGCTGTaGGGCGCCAGAGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSELARL*GAREHS
Trigger: GCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTC...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp CAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGGTCTGCCACGGCCTGGGTTCTGGCCTaGGTGAGGATCTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QPGASSMGSALRGLGSATAWVLA*VRIWKL
Trigger: CAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGC...CGTGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp AACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCGCCCTCAGAGGGTTGCGGCCTaGAAGTGGGATCCGGGCATC +
Preference number: 4 (lower is better)
Translates to: NQALLSSSRALSHRRQRPQRVAA*KWDPGI
Trigger: GATGCCCGGATCCCACTTTCAGGCCGCAACCCTCTG...AGGGCGCTGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCCCGGGTGAGCTGTCTTaGGCCTCAACCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPPGELS*ASTTQV
Trigger: GACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGG...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGTTCCCTTTCCTGAGGTaGTGCCTCCGGAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQFPFLR*CLRREL
Trigger: CAACTCCCTCCGGAGGCAGCACCTCAGGAAAGGGAA...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTCGTTGTCACAGGCACTaGCCAGGCCGTAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASRCHRH*PGRSAA
Trigger: TGCAGCACTACGGCCTGGGCAGTGCCTGTGACAACG...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGCAGGAAGTCACGGGCTaGCGCAGGATAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQQEVTG*RRIVRL
Trigger: CAGCCTAACTATCCTGCGGCAGCCCGTGACTTCCTG...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp GCAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGGGATCCGGGCATCGTaGACCTCGATGATACAGTCC +
Preference number: 4 (lower is better)
Translates to: AGSSGRTKHAELLRDVHWGIRAS*TSMIQS
Trigger: GGACTGTATCATCGAGGTCCACGATGCCCGGATCCC...CCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGGCAGGTAGTCAGCCATaGTCTCCTCCCCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLAGSQP*SPPRPG
Trigger: ACCTGGTCGGGGAGGAGACCATGGCTGACTACCTGC...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGTCCACTGGGAAGCCTaGTGTCCACTCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASVHWEA*CPLPPA
Trigger: AGCAGGTGGGAGTGGACACCAGGCTTCCCAGTGGAC...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp CCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGAGGACAGGAGAGACATaGAGTGGCGCTGGACAGTCA +
Preference number: 4 (lower is better)
Translates to: PVPPAWGILHGLSTERSWRTGET*SGAGQS
Trigger: TGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCCT...CCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCACCTCGGAACAGGGCCTaGGTATCCGCGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSPRNRA*VSAWWA
Trigger: AGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGG...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CCAGTCCCGCCAGCCTGGGGCATCCTCCATGGGCTCAGCACTGAGAGGTCTTGGTTGAGGACCAGCAAGTaGGGCTTAAGCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PVPPAWGILHGLSTERSWLRTSK*GLSPRV
Trigger: AACCCTTGGGCTTAAGCCTCACTTGCTGGTCCTCAA...CCAAGACCTCTCAGTGCTGAGCCCATGGAGGATGCCCCAGGCTGGCGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGAGCTTCTGGACCGGGTaGGCTGTCTTGAGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PGVSTAHAGRPSSHCTAKSFWTG*AVLSLN
Trigger: GTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCT...CTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGAGCTTCTGGACCGGGTaGGCTGTCTTGAGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLSFWTG*AVLSLN
Trigger: GTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCT...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGCCTGAAACAGAGGGTTaGGGCCTGAAAGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQPETEG*GLKVGS
Trigger: GGATCCCACTTTCAGGCCGCAACCCTCTGTTTCAGG...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCACCACGGCGGAAAGTCTaGAGGAAGTCACGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSPRRKV*RKSRAA
Trigger: GGCAGCCCGTGACTTCCTGCAGACTTTCCGCCGTGG...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCCACAGCAAAGCCATGTaGAGGGCGTCCCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPHSKAM*RASPST
Trigger: GGTTGAGGGGGACGCCCTGCACATGGCTTTGCTGTG...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCAGGTCTCTACTGCCCATaGCGGGCGGCCTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSGLYCP*RAAFQS
Trigger: TGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACC...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGGTGGACCCCTTCAGGTaGACTATAATGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQVDPFR*TIMGLE
Trigger: CTCCAGCCCCATTATAGTGCACCTGAAGGGGTCCAC...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp TCTGCCACGTTCTCTAGCTCTCCAGTCACCCACTCATCCAGGGTAGGAGGGGTTGGCAGCCGGAGCTTCTaGACAGGATGTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SATFSSSPVTHSSRVGGVGSRSF*TGCPWP
Trigger: GGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCC...AACCCCTCCTACCCTGGATGAGTGGGTGACTGGAGAGCTAGAGAACGTGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGCCTGGGTGAGGATCTaGAAGCTGTTGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASAWVRI*KLLAGL
Trigger: GAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGC...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GCAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGTTGAGGACCAGCAAGTaGGGCTTAAGCCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: AGSSGRTKHAELLRDVHWLRTSK*GLSPRV
Trigger: AACCCTTGGGCTTAAGCCTCACTTGCTGGTCCTCAA...CCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp CCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGAGCGCTGGTGTTTGTTaGGGGTGTACAGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PFFGSSCSRPRNRAWVSASAGVC*GCTAGS
Trigger: ACTACCTGCTGTACACCCTCAACAAACACCAGCGCT...CGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTGCTTCCGAAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGAGCGCTGGTGTTTGTTaGGGGTGTACAGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGSAGVC*GCTAGS
Trigger: ACTACCTGCTGTACACCCTCAACAAACACCAGCGCT...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTCCTGAAACAGAGGGTTaGGGCCTGAAAGTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASPETEG*GLKVGS
Trigger: GGATCCCACTTTCAGGCCGCAACCCTCTGTTTCAGG...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp GGACAGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCACCAGTGCTTGGGCTCTaGTGCTGGGAGTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQERHGVALDSHDKDLPPPVLGL*CWESLV
Trigger: GACCAGAGACTCCCAGCAGCAGAGCCCAAGCACTGG...TGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CAGGAAGCTCCGGGAGAACCAAGCATGCGGAGCTGCTCAGGGACGTCCACTGGGAGCTTCAGGCTGCTCTaGATCTTCTTCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QEAPGEPSMRSCSGTSTGSFRLL*IFFSPP
Trigger: AGGAGGGCTGAAGAAGATGCAGAGCAGCCTGAAGCT...CCCAGTGGACGTCCCTGAGCAGCTCCGCATGCTTGGTTCTCCCGGAGCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS-3UTR CCA 90 bp CAGCAAAGCCATGTGCAGGGCGTCCCCCTCAACCCTGCCCTGAACATGCCCCAGAGGACTGCAAGACACTaGACCGAAAGCCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: QQSHVQGVPLNPALNMPQRTARH*TESLQH
Trigger: GTGTTGGAGGCTTTCGGTCCAGTGTCTTGCAGTCCT...CTGGGGCATGTTCAGGGCAGGGTTGAGGGGGACGCCCTGCACATGGCTTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp GCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGTCCTGCAGCACCTTAGTCAGCCTCGGGACTCAGTaGACACCAAAGTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: AGASAQDVPGPRSCSTLVSLGTQ*TPKSRP
Trigger: TGGTCTTGACTTTGGTGTCCACTGAGTCCCGAGGCT...GACTAAGGTGCTGCAGGACCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CTTCCCTCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCCCCCGCCGTGGCCTTaGGATCTCACCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LPSSRTQAVDPFRCTIMGPPPWP*DLTLSM
Trigger: CATGGAGAGGGTGAGATCCCAAGGCCACGGCGGGGG...CCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGAGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317502.11
3UTR CAA 72 bp GCCTGGGTTCTGGCCTGGGTGAGGATCTGGAAGCTGTaGGCAGGACTCAACCAAGCACTGCTCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: AWVLAWVRIWKL*AGLNQALLSSS
Trigger: GGAGCTAGAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCCAGAACCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp TTAACACACAGGCCCAAGGCACTACGGTGCACCTCACAGGCCAGTAAGAAACAGCATGCCCCAGGGCACTaGGGGGCGAAGCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LTHRPKALRCTSQASKKQHAPGH*GAKPVL
Trigger: AAGCACTGGCTTCGCCCCTCAGTGCCCTGGGGCATG...CTGTTTCTTACTGGCCTGTGAGGTGCACCGTAGTGCCTTGGGCCTGTGTGTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GGACAGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCACTGACACAGCCAACCTaGATACTTCCTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQERHGVALDSHDKDLPPLTQPT*ILPAPG
Trigger: GCCTGGGGCAGGAAGTATTCAGGTTGGCTGTGTCAG...TGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAATGATGGACACTTCGTaGTCTGCAATGACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRMMDTS*SAMTVD
Trigger: ATCAACAGTCATTGCAGATCACGAAGTGTCCATCAT...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGTGTTGCATAATTTTCTaGTGCTCTGTAAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: GSLELARLWGAREHSTLVCCIIF*CSVRSA
Trigger: GGCGGATCTTACAGAGCAGCAGAAAATTATGCAACA...CACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp AGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAGCACCCTTTCCTGAGGTGCTaGCTCCGGAGGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: RRDMEWRWTVTTRTCLQHPFLRC*LRRELM
Trigger: CATCAACTCCCTCCGGAGGCAGCACCTCAGGAAAGG...GTGCTGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCACCTTTCCTGAGGTGCTaGCTCCGGAGGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSPFLRC*LRRELM
Trigger: CATCAACTCCCTCCGGAGGCAGCACCTCAGGAAAGG...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR GCA 90 bp TCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCTGGAGGTGTCCACTCCCACCTaGTTGGGCCCTGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SSRTQAVDPFRCTIMGLEVSTPT*LGPATG
Trigger: CCCAGTTGCAGGGCCCAAGCAGGTGGGAGTGGACAC...CTCCAGCCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGAACCTGAATACTTCCTaGCCCAGGCGGTCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PGVSTAHAGRPSSHCTAKNLNTS*PRRSGL
Trigger: TAACCCTGACCGCCTGGGGCAGGAAGTATTCAGGTT...CTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCGAAAATGGGCTGAGCTaGACCAGACCCTCACACACC +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPENGLS*TRPSHT
Trigger: GGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTC...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGCCTCAACTTTGCAGATaGCCACCTGGAAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PFFGSSCSRPRNRAWVSAPQLCR*PPGKWA
Trigger: AGCCCATTTTCCAGGTGGGCATCTGCAAAGTTGAGG...CGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTGCTTCCGAAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGGAGCCCCCTCAACTTTaGAGATGCCCACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLWGAREHSTLVTSMELLEPPQL*RCPPGK
Trigger: TTTTCCAGGTGGGCATCTGCAAAGTTGAGGGGGCTC...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCGAAACAGGAGGCAGCGCCCTaGAGCCTCCCGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: LMAASLSLVVGLQDTGPKQEAAP*SLPSTL
Trigger: CAGTGTGGACGGGAGGCTGCAGGGCGCTGCCTCCTG...TTTCGGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCGTCACGACAAGGACTTaGCTCCAGCACTGGACACAC +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPVTTRT*LQHWTH
Trigger: GTGTGTCCAGTGCTGGAGGCAAGTCCTTGTCGTGAC...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp GAAAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATGCGGGGTCAATCTCATaGCGGCACCGTCCCCGGAAA +
Preference number: 4 (lower is better)
Translates to: ENGLSCTRPSHTTALQADAGSIS*RHRPRK
Trigger: TTTCCGGGGACGGTGCCGCCATGAGATTGACCCCGC...ATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCAGGGATCCGGGCATCGTaGACCTCGATGATACAGTCC +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSGIRAS*TSMIQS
Trigger: GGACTGTATCATCGAGGTCCACGATGCCCGGATCCC...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp GGACAGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAGCTGCTGGGAGTCTCTaGTCTGTGTCTGTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GQERHGVALDSHDKDLPPAAGSL*SVSVCA
Trigger: GGCACACACAGACACAGACCAGAGACTCCCAGCAGC...TGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp AACCAAGCACTGCTCTCTAGCTCCAGGGCACTAAGCCACAGGAGGCAGCGCCCTAGGAGAGACATGGAGTaGCGCTGGACAGTCACGACA +
Preference number: 4 (lower is better)
Translates to: NQALLSSSRALSHRRQRPRRDME*RWTVTT
Trigger: TGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCT...AGGGCGCTGCCTCCTGTGGCTTAGTGCCCTGGAGCTAGAGAGCAGTGCTTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCCATCGTGGACCTCGATaGTACAGTCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPHRGPR*YSPPAS
Trigger: TGAAGCTGGTGGACTGTATCATCGAGGTCCACGATG...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp GTGACCAGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCGGCCGCTCAGAGACCTaGATTTTGGACATCACAGCT +
Preference number: 4 (lower is better)
Translates to: VTSMELLDRVSCLEPQPPGRSET*ILDITA
Trigger: AGCTGTGATGTCCAAAATTCAGGTCTCTGAGCGGCC...GGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp TTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGTGGTGGGCTGGCAGCTGACGCTTCGTGATCTGCAATaGCTGTTGATTCAGCACATT +
Preference number: 4 (lower is better)
Translates to: FQASEQGLGIRVVGWQLTLRDLQ*LLIQHI
Trigger: AATGTGCTGAATCAACAGTCATTGCAGATCACGAAG...CGTCAGCTGCCAGCCCACCACGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp GAAAATGGGCTGAGCTGCACCAGACCCTCACACACCACAGCACTGCAAGCTGATCCATGGGCTCAGCACTaGGAGGTCTTGGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ENGLSCTRPSHTTALQADPWAQH*EVLGLP
Trigger: TGGCAGACCCAAGACCTCTCAGTGCTGAGCCCATGG...ATCAGCTTGCAGTGCTGTGGTGTGTGAGGGTCTGGTGCAGCTCAGCCCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AGCATGGAGCTTCTGGACCGGGTGAGCTGTCTTGAGCCTCAACCACCCAGGTCAGACTCAACCAAGCACTaGTCTCTAGCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SMELLDRVSCLEPQPPRSDSTKH*SLAPGH
Trigger: GTGCCCTGGAGCTAGAGAGCAGTGCTTGGTTGAGTC...TGACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGGTCCAGAAGCTCCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp TTAACACACAGGCCCAAGGCACTACGGTGCACCTCACAGGCCAGTAAGAAACAGACCCTCTCCATGTCCTaGGGACAGCCTCGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTHRPKALRCTSQASKKQTLSMS*GQPRPQ
Trigger: CTGAGGGCGAGGCTGTCCCCAGGACATGGAGAGGGT...CTGTTTCTTACTGGCCTGTGAGGTGCACCGTAGTGCCTTGGGCCTGTGTGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAAACATCACAGCTCTGGTaGTCCCAGGCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGETSQLW*SQARHP
Trigger: TGGGTGGCGAGCCTGGGATCACCAGAGCTGTGATGT...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp CTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCGAAACCGGGTGAGCTGTCTTaGGCCTCAACCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LMAASLSLVVGLQDTGPKPGELS*ASTTQV
Trigger: GACCTGGGTGGTTGAGGCTCAAGACAGCTCACCCGG...TTTCGGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATCTGCAATGACTGTTaGTTCAGCACATTAGCATCT +
Preference number: 4 (lower is better)
Translates to: LELARLWGAREHSTLVTSICNDC*FSTLAS
Trigger: AGATGCTAATGTGCTGAATCAACAGTCATTGCAGAT...GCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCGAAACCACGGCGGAAAGTCTaGAGGAAGTCACGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LMAASLSLVVGLQDTGPKPRRKV*RKSRAA
Trigger: GGCAGCCCGTGACTTCCTGCAGACTTTCCGCCGTGG...TTTCGGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAAGCAGGTAGTCAGCCATaGTCTCCTCCCCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGEAGSQP*SPPRPG
Trigger: ACCTGGTCGGGGAGGAGACCATGGCTGACTACCTGC...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR TCA 90 bp CTCTCTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCACCTGGAAAATGGGCTaGGCTGCACCAGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSDGSKPLTCCRTARHWTTWKMG*AAPDPH
Trigger: GTGAGGGTCTGGTGCAGCTCAGCCCATTTTCCAGGT...GGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGCCTGGGTGAGGATCTGGAAGCTGTTGGCAGGACTCAACCAAGCACTGCTCTCCACACACCACAGCACTaGAAGCTGATGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: GLGEDLEAVGRTQPSTALHTPQH*KLMECS
Trigger: GGAACATTCCATCAGCTTGCAGTGCTGTGGTGTGTG...GAGAGCAGTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCTCACCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CTCTCTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCCTTGGGCTCTGCTGCTaGGAGTCTCTGGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LSDGSKPLTCCRTARHWTLGLCC*ESLVCV
Trigger: GACACAGACCAGAGACTCCCAGCAGCAGAGCCCAAG...GGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTTCCCTCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCATCGTGGACCTCGATaGTACAGTCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPSSRTQAVDPFRCTIMGHRGPR*YSPPAS
Trigger: TGAAGCTGGTGGACTGTATCATCGAGGTCCACGATG...CCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTAGCTTTAACTCCTTCTaGGACAGCATCCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: QAVGRQRAQHPSDQHGASSFNSF*DSIHFS
Trigger: TGAGAAATGGATGCTGTCTCAGAAGGAGTTAAAGCT...AGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CCAGGGGTCTCTACTGCCCATGCCGGGCGGCCTTCCAGTCATTGCACAGCAAAGTGTTGCATAATTTTCTaGTGCTCTGTAAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: PGVSTAHAGRPSSHCTAKCCIIF*CSVRSA
Trigger: GGCGGATCTTACAGAGCAGCAGAAAATTATGCAACA...CTTTGCTGTGCAATGACTGGAAGGCCGCCCGGCATGGGCAGTAGAGACCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCGAAAGTGCTTGGGCTCTGCTaGTGGGAGTCTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LMAASLSLVVGLQDTGPKVLGLC*WESLVC
Trigger: ACAGACCAGAGACTCCCAGCAGCAGAGCCCAAGCAC...TTTCGGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCCTTGGGCCCTGCAACTaGGGTCCCTGGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSKSFELQVHIQGSHSSALGPCN*GPWSWP
Trigger: TGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAAG...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTCTCTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCCGGCCTTCCAGTCATTaGACAGCAAAGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: LSDGSKPLTCCRTARHWTRPSSH*TAKPCA
Trigger: TGCACATGGCTTTGCTGTGCAATGACTGGAAGGCCG...GGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp TCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGCTGGAGACGTACCCAAAGCGCTaGTGTTTGTTGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: SSRTQAVDPFRCTIMGLETYPKR*CLLRVY
Trigger: GTACACCCTCAACAAACACCAGCGCTTTGGGTACGT...CTCCAGCCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp GGACAGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCATGCATAATTTTCTGCTaGTCTGTAAGATCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQERHGVALDSHDKDLPPCIIFC*SVRSAK
Trigger: CTTGGCGGATCTTACAGAGCAGCAGAAAATTATGCA...TGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCCGTTGTCACAGGCACTaGCCAGGCCGTAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSKSFELQVHIQGSHSSARCHRH*PGRSAA
Trigger: TGCAGCACTACGGCCTGGGCAGTGCCTGTGACAACG...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp AACCAACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGCCACACTGCCAGCAATaGCCCTGGCCCAGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: NQHIPELSKSFELQVHIQPHCQQ*PWPSEP
Trigger: GGGCTCACTGGGCCAGGGGCATTGCTGGCAGTGTGG...CTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATGTGTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR GCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCGCACAGGCTGCACGGTaGACGCATTTCCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSKSFELQVHIQGSHSSAAQAAR*THFPEG
Trigger: GCCTTCAGGGAAATGCGTGCACCGTGCAGCCTGTGC...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAAACGTACCCAAAGCGCTaGTGTTTGTTGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGETYPKR*CLLRVY
Trigger: GTACACCCTCAACAAACACCAGCGCTTTGGGTACGT...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS-3UTR CCA 90 bp CAGGTTCACATTCAGGGATCACACAGTTCTGCCTGTTCTCAGGGCACAGCAACTGGATCTGGAAGCTGTTaGCAGGACTCAACCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QVHIQGSHSSACSQGTATGSGSC*QDSTKH
Trigger: GTGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCC...AGTTGCTGTGCCCTGAGAACAGGCAGAACTGTGTGATCCCTGAATGTGAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTTCCCTCTTCTAGGACACAGGCTGTGGACCCCTTCAGGTGCACTATAATGGGGGGAATGTTCCAGTTATaGTGGACACTTCGTGATCTG +
Preference number: 4 (lower is better)
Translates to: LPSSRTQAVDPFRCTIMGGMFQL*WTLRDL
Trigger: CAGATCACGAAGTGTCCATCATAACTGGAACATTCC...CCCCATTATAGTGCACCTGAAGGGGTCCACAGCCTGTGTCCTAGAAGAGGGAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CCA 90 bp AACCAACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGCCAGGAGGCAGGGGGTaGTCTGAGTCTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: NQHIPELSKSFELQVHIQPGGRG*SESPHS
Trigger: GCTGTGAGGAGACTCAGACCACCCCCTGCCTCCTGG...CTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATGTGTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCGAATCCCACTACCCGTaGGCTAGAAGGTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSKSFELQVHIQGSHSSAESHYP*ARRCSE
Trigger: CTCTGAGCACCTTCTAGCTCACGGGTAGTGGGATTC...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTGATGGCAGCAAGCCTCTCACTTGTTGTAGGACTGCAAGACACTGGACCGAAACAGCACATTAGCATCTaGCACAGCCAACCTGAATAC +
Preference number: 4 (lower is better)
Translates to: LMAASLSLVVGLQDTGPKQHISI*HSQPEY
Trigger: GTATTCAGGTTGGCTGTGTCAGATGCTAATGTGCTG...TTTCGGTCCAGTGTCTTGCAGTCCTACAACAAGTGAGAGGCTTGCTGCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp AACCAACACATTCCAGAGCTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGATTTCTCAAGAGGCCTaGGCAGGAAGCTCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: NQHIPELSKSFELQVHIQISQEA*AGSSGR
Trigger: TCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAAT...CTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCTCTGGAATGTGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR TCA 90 bp CTTTCCAAGTCCTTTGAACTTCAGGTTCACATTCAGGGATCACACAGTTCTGCCCACAGCACTGCAAGCTaGTGGAATGTTCCAGTTATG +
Preference number: 4 (lower is better)
Translates to: LSKSFELQVHIQGSHSSAHSTAS*WNVPVM
Trigger: CATAACTGGAACATTCCATCAGCTTGCAGTGCTGTG...GGCAGAACTGTGTGATCCCTGAATGTGAACCTGAAGTTCAAAGGACTTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS GCA 90 bp AGCCCTCCTCTGCGCCGCTGCGACCCGCCTCTGAGGTTCCGGCGCTaGGGGCCTCCGGCACTGCGGGCTTCCGGCGCTCCAAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SPPLRRCDPPLRFRR*GPPALRASGAPRGR
Trigger: GCGGCCCCTTGGAGCGCCGGAAGCCCGCAGTGCCGGAGGCCCGCAGCGCCGGAACCTCAGAGGCGGGTCGCAGCGGCGCAGAGGAGGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS GCA 90 bp CGGCGGGCCAGAGGTAGGAGGTCAAGCAGGCCCTGGGTCCGAGGCTaGGCCGCGGGGGCACTCGCGGGAACGGGCCTCTCCCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRARGRRSSRPWVRG*AAGALAGTGLSRSC
Trigger: GCAGCTGCGGGAGAGGCCCGTTCCCGCGAGTGCCCCCGCGGCGCAGCCTCGGACCCAGGGCCTGCTTGACCTCCTACCTCTGGCCCGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS CCA 90 bp AGAGGACAGGGGCGGCGGGCCAGAGGTAGGAGGTCAAGCAGGCCCTaGGTCCGAGGCTGCGCCGCGGGGGCACTCGCGGGAACGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RGQGRRARGRRSSRP*VRGCAAGALAGTGL
Trigger: GAGGCCCGTTCCCGCGAGTGCCCCCGCGGCGCAGCCTCGGACCCAGGGCCTGCTTGACCTCCTACCTCTGGCCCGCCGCCCCTGTCCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS CCA 90 bp GCCACGTCGCGACCGCACAGGGGGAAGTTCTCCCGCCAGGCGGCCTaGGCGGCGCTGCACAGCGCGCGCGGGGTCAATCTCATGGCGGCA +
Preference number: 5 (lower is better)
Translates to: ATSRPHRGKFSRQAA*AALHSARGVNLMAA
Trigger: TGCCGCCATGAGATTGACCCCGCGCGCGCTGTGCAGCGCCGCCCAGGCCGCCTGGCGGGAGAACTTCCCCCTGTGCGGTCGCGACGTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000495014.5
CDS CCA 90 bp GCGGCCGTAGGCATGACCTTGCCCCTCCCCGCCGTGCCTCACCCTTaGCCATGTGGCCCGGGAACCAGCGCGCCACGTCGCGACCGCACA +
Preference number: 5 (lower is better)
Translates to: AAVGMTLPLPAVPHP*PCGPGTSAPRRDRT
Trigger: TGTGCGGTCGCGACGTGGCGCGCTGGTTCCCGGGCCACATGGCCAAGGGTGAGGCACGGCGGGGAGGGGCAAGGTCATGCCTACGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS TCA 90 bp TCTGCATCTTCTTCAGCCCTCCTCTGCGCCGCTGCGACCCGCCTCTaGGGTTCCGGCGCTGCGGGCCTCCGGCACTGCGGGCTTCCGGCG +
Preference number: 5 (lower is better)
Translates to: SASSSALLCAAATRL*GSGAAGLRHCGLPA
Trigger: CGCCGGAAGCCCGCAGTGCCGGAGGCCCGCAGCGCCGGAACCTCAGAGGCGGGTCGCAGCGGCGCAGAGGAGGGCTGAAGAAGATGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS CCA 90 bp CAGCCCAGAACGACCGGGAGAAGCAGGCGACGGCCGAAACCGGGGTaGGAGGGAAGCAGAGGCGCCGCGGCCGTAGGCATGACCTTGCCC +
Preference number: 5 (lower is better)
Translates to: QPRTTGRSRRRPKPG*EGSRGAAAVGMTLP
Trigger: GGGCAAGGTCATGCCTACGGCCGCGGCGCCTCTGCTTCCCTCCCACCCCGGTTTCGGCCGTCGCCTGCTTCTCCCGGTCGTTCTGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS TCA 90 bp GGAACATCAGGGGCCGCTCAGAGACCTGTGTGGGCACAGAGGGCATaGTCAGGCCGCGGTGGCAGCCTCCCACCCAGGTGGGCCACTCAG +
Preference number: 5 (lower is better)
Translates to: GTSGAAQRPVWAQRA*SGRGGSLPPRWATQ
Trigger: CTGAGTGGCCCACCTGGGTGGGAGGCTGCCACCGCGGCCTGATCATGCCCTCTGTGCCCACACAGGTCTCTGAGCGGCCCCTGATGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460848.5
CDS CCA 90 bp CCAAGAGGACGGCACTCGGCTGTGGTCCCGGCCCCCACTCCTGCCTaGCACCTGCGACCAACCTCTCTGCCCTGGTCCGTCAAATGGGGA +
Preference number: 5 (lower is better)
Translates to: PRGRHSAVVPAPTPA*HLRPTSLPWSVKWG
Trigger: TCCCCATTTGACGGACCAGGGCAGAGAGGTTGGTCGCAGGTGCCAGGCAGGAGTGGGGGCCGGGACCACAGCCGAGTGCCGTCCTCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS-3UTR CAA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTAGCACGCGCTCTACGTaGTCACAGGCACTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSSTRST*SQALPR
Trigger: CCTGGGCAGTGCCTGTGACAACGTAGAGCGCGTGCT...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS GCA 90 bp AGGGAAGCGTGGTCAGCAGCCGGAAGCCACACAGAGGTCGGCAGGTaGCAGACGCCTGCAGAGCTCTTGACAGAGTGCTGGGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: REAWSAAGSHTEVGR*QTPAELLTECWAWP
Trigger: GGGCCAGGCCCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTGGCACCTGCCGACCTCTGTGTGGCTTCCGGCTGCTGACCACGCTTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS-3UTR CAA 90 bp TTGGGCCCTGCAACTGGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGATTGATGAGGGAGGACTaGCCCACGTTGGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: LGPATGVPGAGQAVGRQRLMRED*PTLGTP
Trigger: TGGGGTCCCCAACGTGGGCAAGTCCTCCCTCATCAA...TCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCCAGTTGCAGGGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS GCA 90 bp CTAACCAAGAGGACGGCACTCGGCTGTGGTCCCGGCCCCCACTCCTaGCTGGCACCTGCGACCAACCTCTCTGCCCTGGTCCGTCAAATG +
Preference number: 5 (lower is better)
Translates to: LTKRTALGCGPGPHS*LAPATNLSALVRQM
Trigger: CATTTGACGGACCAGGGCAGAGAGGTTGGTCGCAGGTGCCAGGCAGGAGTGGGGGCCGGGACCACAGCCGAGTGCCGTCCTCTTGGTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS-3UTR CAA 90 bp GGGGTCCCTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGGAGCCCCCTCAACTTaGCAGATGCCCACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GVPGAGQAVGRQRAQHPSGAPST*QMPTWK
Trigger: TTTCCAGGTGGGCATCTGCAAAGTTGAGGGGGCTCC...ACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAGGGACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS CCA 90 bp CCAGCCACTGACAAAGACACTAACCAAGAGGACGGCACTCGGCTGTaGTCCCGGCCCCCACTCCTGCCTGGCACCTGCGACCAACCTCTC +
Preference number: 5 (lower is better)
Translates to: PATDKDTNQEDGTRL*SRPPLLPGTCDQPL
Trigger: GAGAGGTTGGTCGCAGGTGCCAGGCAGGAGTGGGGGCCGGGACCACAGCCGAGTGCCGTCCTCTTGGTTAGTGTCTTTGTCAGTGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS-3UTR CAA 90 bp CTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCGCGGCCTTCCAGTCATaGCACAGCAAAGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: LELARLWGAREHSTLVTSAAFQS*HSKAMC
Trigger: GCACATGGCTTTGCTGTGCAATGACTGGAAGGCCGC...GCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS CCA 90 bp CCTGGCACCCAATGCTCCGAGGAAGGCCTCAGGGACCCAACCCCATaGCAGCGTCACTCTCACCAAGCTCCAGGGTTCCCCAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: PGTQCSEEGLRDPTP*QRHSHQAPGFPRGS
Trigger: AGATCCTCTGGGGAACCCTGGAGCTTGGTGAGAGTGACGCTGCCATGGGGTTGGGTCCCTGAGGCCTTCCTCGGAGCATTGGGTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460848.5
CDS TCA 90 bp GTGGCATCAGCACATCAGCCACACGCGCCAGTACCTTTCCTGAGGTaGTCAGCCGCACGCGCCAGTACCTTTCCTGAGGTGCTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: VASAHQPHAPVPFLR*SAARASTFPEVLPP
Trigger: CGGAGGCAGCACCTCAGGAAAGGTACTGGCGCGTGCGGCTGATCACCTCAGGAAAGGTACTGGCGCGTGTGGCTGATGTGCTGATGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS-3UTR CAA 90 bp AGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCATGGAGCTTCTGATCTTCTTCAGCCCCTaGGCCATGTGGCCCGGGAAC +
Preference number: 5 (lower is better)
Translates to: RLWGAREHSTLVTSMELLIFFSP*AMWPGN
Trigger: GTTCCCGGGCCACATGGCCAAGGGGCTGAAGAAGAT...CAGAAGCTCCATGCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CAA 90 bp CACCACCGCAAAGAGGCAGCCGGAGCTTCTGCACAGGATGTCCCTGGCCCCAGGAGTCACGACAAGGACTaGCCTCCAGCACTGGACACA +
Preference number: 5 (lower is better)
Translates to: HHRKEAAGASAQDVPGPRSHDKD*PPALDT
Trigger: TGTGTCCAGTGCTGGAGGCAAGTCCTTGTCGTGACT...CCTGGGGCCAGGGACATCCTGTGCAGAAGCTCCGGCTGCCTCTTTGCGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS CCA 90 bp GGCAGGTGCCAGACGCCTGCAGAGCTCTTGACAGAGTGCTGGGCCTaGCCCCTGAGGACTCCACCTGAATTTTGGACATCACAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GRCQTPAELLTECWA*PLRTPPEFWTSQLW
Trigger: CCAGAGCTGTGATGTCCAAAATTCAGGTGGAGTCCTCAGGGGCCAGGCCCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTGGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS TCA 90 bp AGATGGTGGCATCAGCACATCAGCCACACGCGCCAGTACCTTTCCTaGGGTGATCAGCCGCACGCGCCAGTACCTTTCCTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: RWWHQHISHTRQYLS*GDQPHAPVPFLRCC
Trigger: GCAGCACCTCAGGAAAGGTACTGGCGCGTGCGGCTGATCACCTCAGGAAAGGTACTGGCGCGTGTGGCTGATGTGCTGATGCCACCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS GCA 90 bp ACAGAGGTCGGCAGGTGCCAGACGCCTGCAGAGCTCTTGACAGAGTaGTGGGCCTGGCCCCTGAGGACTCCACCTGAATTTTGGACATCA +
Preference number: 5 (lower is better)
Translates to: TEVGRCQTPAELLTE*WAWPLRTPPEFWTS
Trigger: TGATGTCCAAAATTCAGGTGGAGTCCTCAGGGGCCAGGCCCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTGGCACCTGCCGACCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS-3UTR CAA 90 bp CCCTTCTTCGGAAGCAGCTGTTCCAGGCCTCGGAACAGGGCCTGGGTATCCGCGAGGATCTGGAAGCTGTaGGCAGGACTCAACCAAGCA +
Preference number: 5 (lower is better)
Translates to: PFFGSSCSRPRNRAWVSARIWKL*AGLNQA
Trigger: TGCTTGGTTGAGTCCTGCCAACAGCTTCCAGATCCT...CGCGGATACCCAGGCCCTGTTCCGAGGCCTGGAACAGCTGCTTCCGAAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS GCA 90 bp GGAACCCAGCAGCCCACGGCGGAAAGTCTGCAGGAAGTCACGGGCTaGCGCAGGATAGTTAGGCTGAATAATGTTCACGTTACCCGTGCC +
Preference number: 5 (lower is better)
Translates to: GTQQPTAESLQEVTG*RRIVRLNNVHVTRA
Trigger: GGCACGGGTAACGTGAACATTATTCAGCCTAACTATCCTGCGGCAGCCCGTGACTTCCTGCAGACTTTCCGCCGTGGGCTGCTGGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000473735.1
ENST00000477902.6
CDS TCA 90 bp AGCTGCCCTGCATTCACTGCACTCACCCAAAGCGCTGGTGTTTGTTaGGGGTGTACAGCAGGTAGTCAGCCATGGTCTCCTCCCCGACCA +
Preference number: 5 (lower is better)
Translates to: SCPAFTALTQSAGVC*GCTAGSQPWSPPRP
Trigger: TGGTCGGGGAGGAGACCATGGCTGACTACCTGCTGTACACCCTCAACAAACACCAGCGCTTTGGGTGAGTGCAGTGAATGCAGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492266.1
CDS-3UTR CAA 90 bp TTAACACACAGGCCCAAGGCACTACGGTGCACCTCACAGGCCAGTAAGAAACAGAGCACGCGCTCTACGTaGTCACAGGCACTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTHRPKALRCTSQASKKQSTRST*SQALPR
Trigger: CCTGGGCAGTGCCTGTGACAACGTAGAGCGCGTGCT...CTGTTTCTTACTGGCCTGTGAGGTGCACCGTAGTGCCTTGGGCCTGTGTGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CAA 90 bp CTGGAGCTGGCCAGGCTGTGGGGCGCCAGAGAGCACAGCACCCTAGTGACCAGCAGCTTTCCAAGTCCTTaGAACTTCAGGTTCACATTC +
Preference number: 5 (lower is better)
Translates to: LELARLWGAREHSTLVTSSFPSP*NFRFTF
Trigger: GAATGTGAACCTGAAGTTCAAAGGACTTGGAAAGCT...GCTGGTCACTAGGGTGCTGTGCTCTCTGGCGCCCCACAGCCTGGCCAGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS CCA 90 bp CCTGACCACTGCATGGCCCTGGACAGTGGCCTCCTCATCTGGAAATaGGGAAAACAGCGTGCCTTCCCCAAAGGTTTGGCGCAAAGACTA +
Preference number: 5 (lower is better)
Translates to: PDHCMALDSGLLIWK*GKQRAFPKGLAQRL
Trigger: TAGTCTTTGCGCCAAACCTTTGGGGAAGGCACGCTGTTTTCCCCATTTCCAGATGAGGAGGCCACTGTCCAGGGCCATGCAGTGGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460848.5
CDS CCA 90 bp CTGGTCCGTCAAATGGGGAAAGGGAAGGCCACTCATGGGGCAGGGTaGAATGGTGACCAGTGCCTGTCAGCTGTGCACTATTACAGCTCT +
Preference number: 5 (lower is better)
Translates to: LVRQMGKGKATHGAG*NGDQCLSAVHYYSS
Trigger: AGAGCTGTAATAGTGCACAGCTGACAGGCACTGGTCACCATTCCACCCTGCCCCATGAGTGGCCTTCCCTTTCCCCATTTGACGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS-3UTR CAA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAATTGATGAGGGAGGACTaGCCCACGTTGGGGACCCCA +
Preference number: 5 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGELMRED*PTLGTP
Trigger: TGGGGTCCCCAACGTGGGCAAGTCCTCCCTCATCAA...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS GCA 90 bp CCACTCATGGGGCAGGGTGGAATGGTGACCAGTGCCTGTCAGCTGTaGACTATTACAGCTCTCACACTAAGCTTCGAGGAAGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PLMGQGGMVTSACQL*TITALTLSFEEGLA
Trigger: TGCCAGACCTTCCTCGAAGCTTAGTGTGAGAGCTGTAATAGTGCACAGCTGACAGGCACTGGTCACCATTCCACCCTGCCCCATGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 90 bp GGGAAAGGGAAGGCCACTCATGGGGCAGGGTGGAATGGTGACCAGTaGCTGTCAGCTGTGCACTATTACAGCTCTCACACTAAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: GKGKATHGAGWNGDQ*LSAVHYYSSHTKLR
Trigger: TCGAAGCTTAGTGTGAGAGCTGTAATAGTGCACAGCTGACAGGCACTGGTCACCATTCCACCCTGCCCCATGAGTGGCCTTCCCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 90 bp ATTTGGAGAATAAATAAAAGCGTCAGGTCCCAACAGCTTGTCTTCTaGTCCCAAGGAGAACACAAGGAAGGGAGTGGAGGGTGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: IWRINKSVRSQQLVF*SQGEHKEGSGGWGG
Trigger: CCCGCCCCACCCTCCACTCCCTTCCTTGTGTTCTCCTTGGGAGCAGAAGACAAGCTGTTGGGACCTGACGCTTTTATTTATTCTCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460848.5
CDS-3UTR CAA 90 bp AGGAGAGACATGGAGTGGCGCTGGACAGTCACGACAAGGACTTGCCTCCAGCACATCGGGATGATCTGCTaGACATTTTCATCCTTTACA +
Preference number: 5 (lower is better)
Translates to: RRDMEWRWTVTTRTCLQHIGMIC*TFSSFT
Trigger: TGTAAAGGATGAAAATGTCAAGCAGATCATCCCGAT...GTGCTGGAGGCAAGTCCTTGTCGTGACTGTCCAGCGCCACTCCATGTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317502.11
CDS-3UTR CAA 90 bp CTTCTGAGACAGCATCCATTTCTCAAGAGGCCTGAGCAGGAAGCTCCGGGAGAAATCGGGATGATCTGCTaGACATTTTCATCCTTTACA +
Preference number: 5 (lower is better)
Translates to: LLRQHPFLKRPEQEAPGEIGMIC*TFSSFT
Trigger: TGTAAAGGATGAAAATGTCAAGCAGATCATCCCGAT...TTCTCCCGGAGCTTCCTGCTCAGGCCTCTTGAGAAATGGATGCTGTCTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317502.11
ENST00000477902.6
CDS GCA 72 bp CTGCGCCGCTGCGACCCGCCTCTGAGGTTCCGGCGCTaGGGGCCTCCGGCACTGCGGGCTTCCGGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: LRRCDPPLRFRR*GPPALRASGAP
Trigger: TGGAGCGCCGGAAGCCCGCAGTGCCGGAGGCCCGCAGCGCCGGAACCTCAGAGGCGGGTCGCAGCGGCGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS CCA 72 bp GGGCGGCGGGCCAGAGGTAGGAGGTCAAGCAGGCCCTaGGTCCGAGGCTGCGCCGCGGGGGCACTCGCGGGA +
Preference number: 6 (lower is better)
Translates to: GRRARGRRSSRP*VRGCAAGALAG
Trigger: TCCCGCGAGTGCCCCCGCGGCGCAGCCTCGGACCCAGGGCCTGCTTGACCTCCTACCTCTGGCCCGCCGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS CCA 72 bp CGACCGCACAGGGGGAAGTTCTCCCGCCAGGCGGCCTaGGCGGCGCTGCACAGCGCGCGCGGGGTCAATCTC +
Preference number: 6 (lower is better)
Translates to: RPHRGKFSRQAA*AALHSARGVNL
Trigger: GAGATTGACCCCGCGCGCGCTGTGCAGCGCCGCCCAGGCCGCCTGGCGGGAGAACTTCCCCCTGTGCGGTCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000495014.5
CDS CAA 90 bp CGCGGCCGTAGGCATGACCTTGCCCCTCCCCGCCGTGCCTCACCCTaGGCCATGTGGCCCGGGAACCAGCGCGCCACGTCGCGACCGCAC +
Preference number: 6 (lower is better)
Translates to: RGRRHDLAPPRRASP*AMWPGNQRATSRPH
Trigger: GTGCGGTCGCGACGTGGCGCGCTGGTTCCCGGGCCACATGGCCAAGGGTGAGGCACGGCGGGGAGGGGCAAGGTCATGCCTACGGCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp AGAGGTAGGAGGTCAAGCAGGCCCTGGGTCCGAGGCTaGGCCGCGGGGGCACTCGCGGGAACGGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: RGRRSSRPWVRG*AAGALAGTGLS
Trigger: GGAGAGGCCCGTTCCCGCGAGTGCCCCCGCGGCGCAGCCTCGGACCCAGGGCCTGCTTGACCTCCTACCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS CCA 72 bp ACGACCGGGAGAAGCAGGCGACGGCCGAAACCGGGGTaGGAGGGAAGCAGAGGCGCCGCGGCCGTAGGCATG +
Preference number: 6 (lower is better)
Translates to: TTGRSRRRPKPG*EGSRGAAAVGM
Trigger: CATGCCTACGGCCGCGGCGCCTCTGCTTCCCTCCCACCCCGGTTTCGGCCGTCGCCTGCTTCTCCCGGTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp AGGACGGCACTCGGCTGTGGTCCCGGCCCCCACTCCTaGCTGGCACCTGCGACCAACCTCTCTGCCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RTALGCGPGPHS*LAPATNLSALV
Trigger: GACCAGGGCAGAGAGGTTGGTCGCAGGTGCCAGGCAGGAGTGGGGGCCGGGACCACAGCCGAGTGCCGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS CAA 72 bp GAGGGAAGCAGAGGCGCCGCGGCCGTAGGCATGACCTaGCCCCTCCCCGCCGTGCCTCACCCTTGGCCATGT +
Preference number: 6 (lower is better)
Translates to: EGSRGAAAVGMT*PLPAVPHPWPC
Trigger: ACATGGCCAAGGGTGAGGCACGGCGGGGAGGGGCAAGGTCATGCCTACGGCCGCGGCGCCTCTGCTTCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp CTGCTCTGCATCTTCTTCAGCCCTCCTCTGCGCCGCTaGGACCCGCCTCTGAGGTTCCGGCGCTGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: LLCIFFSPPLRR*DPPLRFRRCGP
Trigger: AGGCCCGCAGCGCCGGAACCTCAGAGGCGGGTCGCAGCGGCGCAGAGGAGGGCTGAAGAAGATGCAGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS CCA 72 bp ACCTGTGTGGGCACAGAGGGCATGATCAGGCCGCGGTaGCAGCCTCCCACCCAGGTGGGCCACTCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TCVGTEGMIRPR*QPPTQVGHSGS
Trigger: GCTTCCTGAGTGGCCCACCTGGGTGGGAGGCTGCCACCGCGGCCTGATCATGCCCTCTGTGCCCACACAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460848.5
CDS CCA 72 bp GACAAAGACACTAACCAAGAGGACGGCACTCGGCTGTaGTCCCGGCCCCCACTCCTGCCTGGCACCTGCGAC +
Preference number: 6 (lower is better)
Translates to: DKDTNQEDGTRL*SRPPLLPGTCD
Trigger: GTCGCAGGTGCCAGGCAGGAGTGGGGGCCGGGACCACAGCCGAGTGCCGTCCTCTTGGTTAGTGTCTTTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp TGGTCAGCAGCCGGAAGCCACACAGAGGTCGGCAGGTaGCAGACGCCTGCAGAGCTCTTGACAGAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: WSAAGSHTEVGR*QTPAELLTECW
Trigger: CCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTGGCACCTGCCGACCTCTGTGTGGCTTCCGGCTGCTGACCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS GCA 72 bp GGCAGGTGCCAGACGCCTGCAGAGCTCTTGACAGAGTaGTGGGCCTGGCCCCTGAGGACTCCACCTGAATTT +
Preference number: 6 (lower is better)
Translates to: GRCQTPAELLTE*WAWPLRTPPEF
Trigger: AAATTCAGGTGGAGTCCTCAGGGGCCAGGCCCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTGGCACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS CCA 72 bp GGCAGTGCTCCTCGGGCACGTCCCCTCCAAGAAAGATaGTGGCATCAGCACATCAGCCACACGCGCCAGTAC +
Preference number: 6 (lower is better)
Translates to: GSAPRARPLQER*WHQHISHTRQY
Trigger: GTACTGGCGCGTGTGGCTGATGTGCTGATGCCACCATCTTTCTTGGAGGGGACGTGCCCGAGGAGCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS TCA 72 bp GCACATCAGCCACACGCGCCAGTACCTTTCCTGAGGTaGTCAGCCGCACGCGCCAGTACCTTTCCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: AHQPHAPVPFLR*SAARASTFPEV
Trigger: CACCTCAGGAAAGGTACTGGCGCGTGCGGCTGATCACCTCAGGAAAGGTACTGGCGCGTGTGGCTGATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS GCA 72 bp CACTCTTCAGCACGCGCTCTACGTTGTCACAGGCACTaGCCAGGCCGTAGTGCTGCACGTACCCAAAGCGCT +
Preference number: 6 (lower is better)
Translates to: HSSARALRCHRH*PGRSAARTQSA
Trigger: AGCGCTTTGGGTACGTGCAGCACTACGGCCTGGGCAGTGCCTGTGACAACGTAGAGCGCGTGCTGAAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000473735.1
ENST00000477902.6
CDS GCA 72 bp ACCTCGATGATACAGTCCACCAGCTTCAGGCTGCTCTaGATCTTCTTCAGCCCTCCTCTGCGCCGCTGCGAC +
Preference number: 6 (lower is better)
Translates to: TSMIQSTSFRLL*IFFSPPLRRCD
Trigger: GTCGCAGCGGCGCAGAGGAGGGCTGAAGAAGATGCAGAGCAGCCTGAAGCTGGTGGACTGTATCATCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477902.6
CDS GCA 72 bp AGCCCTCCTGTGAACTGGACTGAACGAGACAAGATGTaGTCTGGGGCTGCGGGGTCAGCAGAAGACTGGCAG +
Preference number: 6 (lower is better)
Translates to: SPPVNWTERDKM*SGAAGSAEDWQ
Trigger: CTGCCAGTCTTCTGCTGACCCCGCAGCCCCAGAGCACATCTTGTCTCGTTCAGTCCAGTTCACAGGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS CCA 72 bp AGTGCTCCTCGGGCACGTCCCCTCCAAGAAAGATGGTaGCATCAGCACATCAGCCACACGCGCCAGTACCTT +
Preference number: 6 (lower is better)
Translates to: SAPRARPLQERW*HQHISHTRQYL
Trigger: AAGGTACTGGCGCGTGTGGCTGATGTGCTGATGCCACCATCTTTCTTGGAGGGGACGTGCCCGAGGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498790.5
CDS TCA 72 bp GGCCTGAAAGTGGGATCCGGGCATCGTGGACCTCGATaGTACAGTCCACCAGCTTCAGGCTGCTCTGCATCT +
Preference number: 6 (lower is better)
Translates to: GLKVGSGHRGPR*YSPPASGCSAS
Trigger: AGATGCAGAGCAGCCTGAAGCTGGTGGACTGTATCATCGAGGTCCACGATGCCCGGATCCCACTTTCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000473735.1
ENST00000477902.6
ENST00000495014.5
ENST00000498790.5
CDS TCA 72 bp CAGCGTGCCTTCCCCAAAGGTTTGGCGCAAAGACTATaGCGACTGTGGAATAAGGGCAGGGGCAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: QRAFPKGLAQRL*RLWNKGRGSAC
Trigger: GCAGGCACTGCCCCTGCCCTTATTCCACAGTCGTCATAGTCTTTGCGCCAAACCTTTGGGGAAGGCACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS CCA 72 bp CAGACGCCTGCAGAGCTCTTGACAGAGTGCTGGGCCTaGCCCCTGAGGACTCCACCTGAATTTTGGACATCA +
Preference number: 6 (lower is better)
Translates to: QTPAELLTECWA*PLRTPPEFWTS
Trigger: TGATGTCCAAAATTCAGGTGGAGTCCTCAGGGGCCAGGCCCAGCACTCTGTCAAGAGCTCTGCAGGCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS CCA 72 bp TGCATGGCCCTGGACAGTGGCCTCCTCATCTGGAAATaGGGAAAACAGCGTGCCTTCCCCAAAGGTTTGGCG +
Preference number: 6 (lower is better)
Translates to: CMALDSGLLIWK*GKQRAFPKGLA
Trigger: CGCCAAACCTTTGGGGAAGGCACGCTGTTTTCCCCATTTCCAGATGAGGAGGCCACTGTCCAGGGCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460848.5
ENST00000495014.5
CDS TCA 72 bp CGTAGTGCTGCACGTACCCAAAGCGCTGGTGTTTGTTaGGGGTGTACAGCAGGTAGTCAGCCATGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RSAARTQSAGVC*GCTAGSQPWSP
Trigger: AGGAGACCATGGCTGACTACCTGCTGTACACCCTCAACAAACACCAGCGCTTTGGGTACGTGCAGCACTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000473735.1
ENST00000477902.6
CDS GCA 72 bp CAGCCCACGGCGGAAAGTCTGCAGGAAGTCACGGGCTaGCGCAGGATAGTTAGGCTGAATAATGTTCACGTT +
Preference number: 6 (lower is better)
Translates to: QPTAESLQEVTG*RRIVRLNNVHV
Trigger: AACGTGAACATTATTCAGCCTAACTATCCTGCGGCAGCCCGTGACTTCCTGCAGACTTTCCGCCGTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317502.11
ENST00000432508.3
ENST00000460848.5
ENST00000473735.1
ENST00000477902.6
CDS GCA 72 bp AAGGCCACTCATGGGGCAGGGTGGAATGGTGACCAGTaGCTGTCAGCTGTGCACTATTACAGCTCTCACACT +
Preference number: 6 (lower is better)
Translates to: KATHGAGWNGDQ*LSAVHYYSSHT
Trigger: AGTGTGAGAGCTGTAATAGTGCACAGCTGACAGGCACTGGTCACCATTCCACCCTGCCCCATGAGTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS TCA 72 bp GCATTCACTGCACTCACCCAAAGCGCTGGTGTTTGTTaGGGGTGTACAGCAGGTAGTCAGCCATGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: AFTALTQSAGVC*GCTAGSQPWSP
Trigger: AGGAGACCATGGCTGACTACCTGCTGTACACCCTCAACAAACACCAGCGCTTTGGGTGAGTGCAGTGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492266.1
CDS GCA 72 bp GGGCAGGGTGGAATGGTGACCAGTGCCTGTCAGCTGTaGACTATTACAGCTCTCACACTAAGCTTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: GQGGMVTSACQL*TITALTLSFEE
Trigger: TTCCTCGAAGCTTAGTGTGAGAGCTGTAATAGTGCACAGCTGACAGGCACTGGTCACCATTCCACCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp ACCTCGATGATACAGTCCACCAGCTTCAGGCTGCTCTaGATCTTCTTCAGCCCAAAGACGTTAAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: TSMIQSTSFRLL*IFFSPKTLSRR
Trigger: TCTCCTGCTTAACGTCTTTGGGCTGAAGAAGATGCAGAGCAGCCTGAAGCTGGTGGACTGTATCATCGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473735.1
CDS GCA 72 bp ATAAATAAAAGCGTCAGGTCCCAACAGCTTGTCTTCTaGTCCCAAGGAGAACACAAGGAAGGGAGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: INKSVRSQQLVF*SQGEHKEGSGG
Trigger: CCCTCCACTCCCTTCCTTGTGTTCTCCTTGGGAGCAGAAGACAAGCTGTTGGGACCTGACGCTTTTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460848.5