RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188786

Ensembl transcript IDs: ENST00000373036.5, ENST00000468190.1

Found 412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCAGCAAAGACTGGGCCACCTTCCCTCAATGCCCAACCTACCTaGCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTGGTGCCAG +
Preference number: 1 (lower is better)
Translates to: LPAKTGPPSLNAQPT*LGRAKFTKAVWWCQ
Trigger: CTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGCCCAGTCTTTGCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp TTCTGTCACCAAACTGGTGGTGCCCCCATGAGACTGGCCAGACCCTaGCAGCAAAGACTGGGCCACCTTCCCTCAATGCCCAACCTACCT +
Preference number: 1 (lower is better)
Translates to: FCHQTGGAPMRLARP*QQRLGHLPSMPNLP
Trigger: AGGTAGGTTGGGCATTGAGGGAAGGTGGCCCAGTCTTTGCTGGCAGGGTCTGGCCAGTCTCATGGGGGCACCACCAGTTTGGTGACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp CAGCAAAGACTGGGCCACCTTCCCTCAATGCCCAACCTACCTGCCTaGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTGGTGCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: QQRLGHLPSMPNLPA*EGPSSLRQFGGASQ
Trigger: CTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGCCCAGTCTTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp TGCAGAGCCAGATCAACCCCACAGCCTGTGAGCCAGGCCTTAAGCTaGCTATTTGTGCTGAAGCGGGCTGCAGAACGACCCGTGTTATCC +
Preference number: 1 (lower is better)
Translates to: CRARSTPQPVSQALS*LFVLKRAAERPVLS
Trigger: GGATAACACGGGTCGTTCTGCAGCCCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGGCTCACAGGCTGTGGGGTTGATCTGGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp TGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTaGTGGAGCAAGGGTCTGGCCTTCCAAGCAAATGTCAGCCTCAGA +
Preference number: 1 (lower is better)
Translates to: CPTHSCLTGLCHCPL*WSKGLAFQANVSLR
Trigger: TCTGAGGCTGACATTTGCTTGGAAGGCCAGACCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp GGGCTCCTATTTCCCACTTCCGCCCCAGGGAACCCAAATCCCAGGTaGCCACAGGATGGGGATATGGGAAGGTCATTACTGCCCTCTGAT +
Preference number: 1 (lower is better)
Translates to: GLLFPTSAPGNPNPR*PQDGDMGRSLLPSD
Trigger: ATCAGAGGGCAGTAATGACCTTCCCATATCCCCATCCTGTGGTCACCTGGGATTTGGGTTCCCTGGGGCGGAAGTGGGAAATAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp CTGCTTCGTCACCCCCGATCTTTGAGAGTGAAAAGGCCACTGACCTaGGTAGGGCCCAACATGAGCACAGCCCTGGCTAACCAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: LLRHPRSLRVKRPLT*VGPNMSTALANQEE
Trigger: CTCTTCTTGGTTAGCCAGGGCTGTGCTCATGTTGGGCCCTACCCAGGTCAGTGGCCTTTTCACTCTCAAAGATCGGGGGTGACGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp TCAATAAATGACACCACTTCTGTCACCAAACTGGTGGTGCCCCCATaGGACTGGCCAGACCCTGCCAGCAAAGACTGGGCCACCTTCCCT +
Preference number: 1 (lower is better)
Translates to: SINDTTSVTKLVVPP*DWPDPASKDWATFP
Trigger: AGGGAAGGTGGCCCAGTCTTTGCTGGCAGGGTCTGGCCAGTCTCATGGGGGCACCACCAGTTTGGTGACAGAAGTGGTGTCATTTATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp CAACCTACCTGCCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTaGTGCCAGCCAGTTTCCTTACCACCTCCTAAGTCCATGAACCCC +
Preference number: 1 (lower is better)
Translates to: QPTCLGRAKFTKAVW*CQPVSLPPPKSMNP
Trigger: GGGGTTCATGGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp GCCCAACCTACCTGCCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTaGTGGTGCCAGCCAGTTTCCTTACCACCTCCTAAGTCCATGAAC +
Preference number: 1 (lower is better)
Translates to: AQPTCLGRAKFTKAV*WCQPVSLPPPKSMN
Trigger: GTTCATGGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp GCACAGCCCTGGCTAACCAAGAAGAGTCGCTATTTAAACTGTGGGTaGTTCAGATGTCCTTCCCTGGGCTCCTATTTCCCACTTCCGCCC +
Preference number: 1 (lower is better)
Translates to: AQPWLTKKSRYLNCG*FRCPSLGSYFPLPP
Trigger: GGGCGGAAGTGGGAAATAGGAGCCCAGGGAAGGACATCTGAAGCACCCACAGTTTAAATAGCGACTCTTCTTGGTTAGCCAGGGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp CCTACCTGCCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTGGTaGCAGCCAGTTTCCTTACCACCTCCTAAGTCCATGAACCCCAAT +
Preference number: 1 (lower is better)
Translates to: PTCLGRAKFTKAVWW*QPVSLPPPKSMNPN
Trigger: ATTGGGGTTCATGGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp TGCTTCCTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTaGAACACCACTCCTTGCTCAGGGCAAGGAAAGGGCTCTTGGGAG +
Preference number: 1 (lower is better)
Translates to: CFLPDTVGLEEQPCL*NTTPCSGQGKGSWE
Trigger: CTCCCAAGAGCCCTTTCCTTGCCCTGAGCAAGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp GGTGCGAGGCCCAGAGACAGCCAAGGACAACTCATGCTCAGCAGTTaGTTTTCCAGGAGGACTGGAAACCTCCTGCCTTATCAACTTCTG +
Preference number: 1 (lower is better)
Translates to: GARPRDSQGQLMLSS*FSRRTGNLLPYQLL
Trigger: CAGAAGTTGATAAGGCAGGAGGTTTCCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAGTTGTCCTTGGCTGTCTCTGGGCCTCGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp CAGTTTGGTGGTGCCAGCCAGTTTCCTTACCACCTCCTAAGTCCATaGACCCCAATCCCTGGTGCTAAGCACCCTTTGAAGCGGTTGTCT +
Preference number: 1 (lower is better)
Translates to: QFGGASQFPYHLLSP*TPIPGAKHPLKRLS
Trigger: AGACAACCGCTTCAAAGGGTGCTTAGCACCAGGGATTGGGGTTCATGGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp AGAAGTTGTAAACAGCAAGGGCCCTACCTCAAAACTTCCCATGGGTaGGAGGCCCAGAGACAGCCAAGGACAACTCATGCTCAGCAGTTG +
Preference number: 1 (lower is better)
Translates to: RSCKQQGPYLKTSHG*EAQRQPRTTHAQQL
Trigger: CAACTGCTGAGCATGAGTTGTCCTTGGCTGTCTCTGGGCCTCGCACCCATGGGAAGTTTTGAGGTAGGGCCCTTGCTGTTTACAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp CCTCAGATTCAAAAGACACATAGGAAGGAGCAACACCCAACACACTaGAAACTCCTGCCCGATCCACAAAGACCCCAGTGCAAGCGATGG +
Preference number: 1 (lower is better)
Translates to: PQIQKTHRKEQHPTH*KLLPDPQRPQCKRW
Trigger: CCATCGCTTGCACTGGGGTCTTTGTGGATCGGGCAGGAGTTTTCAGTGTGTTGGGTGTTGCTCCTTCCTATGTGTCTTTTGAATCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp TGCAGACTGAGAAGCCCTCTCTTGAACAGGAGTAACAGTGAGAAATaGCCAGTGGTCGTCGGCTTCCCCAAAGGGCATCAGAAGAAATAC +
Preference number: 1 (lower is better)
Translates to: CRLRSPLLNRSNSEK*PVVVGFPKGHQKKY
Trigger: GTATTTCTTCTGATGCCCTTTGGGGAAGCCGACGACCACTGGGCATTTCTCACTGTTACTCCTGTTCAAGAGAGGGCTTCTCAGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp AACAGCGATGTTCCCCAAGGAAAATTCACTGCGATCTGCAAGCCCTaGCAACCAACCGAGAGAAAGAACCAGGAAGGCAAGGACAGTGAT +
Preference number: 1 (lower is better)
Translates to: NSDVPQGKFTAICKP*QPTERKNQEGKDSD
Trigger: ATCACTGTCCTTGCCTTCCTGGTTCTTTCTCTCGGTTGGTTGCCAGGGCTTGCAGATCGCAGTGAATTTTCCTTGGGGAACATCGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp ATGAGCACAGCCCTGGCTAACCAAGAAGAGTCGCTATTTAAACTGTaGGTGCTTCAGATGTCCTTCCCTGGGCTCCTATTTCCCACTTCC +
Preference number: 1 (lower is better)
Translates to: MSTALANQEESLFKL*VLQMSFPGLLFPTS
Trigger: GGAAGTGGGAAATAGGAGCCCAGGGAAGGACATCTGAAGCACCCACAGTTTAAATAGCGACTCTTCTTGGTTAGCCAGGGCTGTGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp AGAAAGAACCAGGAAGGCAAGGACAGTGATCATGTTGCTAGAGCCTaGTTTGCACACACGTCATCAACAGACAGCAGTCAACAAGCTGCC +
Preference number: 1 (lower is better)
Translates to: RKNQEGKDSDHVARA*FAHTSSTDSSQQAA
Trigger: GGCAGCTTGTTGACTGCTGTCTGTTGATGACGTGTGTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCTTGCCTTCCTGGTTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp CTTACTGCCATTTCTCCTCATGGCAGTAACAACATTCACCACCACTaGCCTCTTTGTCTGTCCCTGAACATCCTTGCTAAAGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: LTAISPHGSNNIHHH*PLCLSLNILAKGRE
Trigger: CTCCCTGCCTTTAGCAAGGATGTTCAGGGACAGACAAAGAGGGCAGTGGTGGTGAATGTTGTTACTGCCATGAGGAGAAATGGCAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp CAGCCAAGGACAACTCATGCTCAGCAGTTGGTTTTCCAGGAGGACTaGAAACCTCCTGCCTTATCAACTTCTGCTGAGGTCAATGGTCAA +
Preference number: 1 (lower is better)
Translates to: QPRTTHAQQLVFQED*KPPALSTSAEVNGQ
Trigger: TTGACCATTGACCTCAGCAGAAGTTGATAAGGCAGGAGGTTTCCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAGTTGTCCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp GGGGATATGGGAAGGTCATTACTGCCCTCTGATACAAGCTTACTTTaGGGTCCCATCACTACTCTCTCAGAAGTTGTAAACAGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: GDMGRSLLPSDTSLL*GPITTLSEVVNSKG
Trigger: GCCCTTGCTGTTTACAACTTCTGAGAGAGTAGTGATGGGACCCCAAAGTAAGCTTGTATCAGAGGGCAGTAATGACCTTCCCATATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 90 bp AGGGCCTCTGGCTCCAAGGTAAATTATCTGTTCTCAATAATATCTTaGCTGGCCCTGAGCAATGGCTCAGAGAACAGGAGAGTGACCAAT +
Preference number: 1 (lower is better)
Translates to: RASGSKVNYLFSIIS*LALSNGSENRRVTN
Trigger: ATTGGTCACTCTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAACAGATAATTTACCTTGGAGCCAGAGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 90 bp CAGAGAGATCTTCACATCTTAAGGCCCCTCCTGGGCTTTGTACCATaGTCTCCTTCTAAACGGAGGTGGAATTCAATAAATGACACCACT +
Preference number: 1 (lower is better)
Translates to: QRDLHILRPLLGFVP*SPSKRRWNSINDTT
Trigger: AGTGGTGTCATTTATTGAATTCCACCTCCGTTTAGAAGGAGATCATGGTACAAAGCCCAGGAGGGGCCTTAAGATGTGAAGATCTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp CCAGGCCAGGGCCACATGGGACAACGACCATCAAGCTACACATATTaGACCAAGGTAAGTGCTTTTCTTTTCACACCTCAATTTAACTTT +
Preference number: 1 (lower is better)
Translates to: PGQGHMGQRPSSYTY*TKVSAFLFTPQFNF
Trigger: AAAGTTAAATTGAGGTGTGAAAAGAAAAGCACTTACCTTGGTGCAATATGTGTAGCTTGATGGTCGTTGTCCCATGTGGCCCTGGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 90 bp GATCCCTTTACATTAGGGAATGAAAATGCAAGGCAAAATTATGGCTaGTTCCTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTG +
Preference number: 1 (lower is better)
Translates to: DPFTLGNENARQNYG*FLPDTVGLEEQPCL
Trigger: CAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAGGAAGCAGCCATAATTTTGCCTTGCATTTTCATTCCCTAATGTAAAGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTGCCACTGCCCTCTCTaGTGGAGCAAGGGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPCHCPL*WSKGLA
Trigger: GGCCAGACCCTTGCTCCATCAGAGAGGGCAGTGGCA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGTATCTTGGCTGGCCCTaGGCAATGGCTCAGAGAACA +
Preference number: 2 (lower is better)
Translates to: ALSSPRSSALETRLMEGQYLGWP*AMAQRT
Trigger: TGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATA...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGTACCTCATGCCTCCTaGTCACCCGCTTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCVPHAS*SPAFPR
Trigger: TCTGGGAAAAGCGGGTGAGCAGGAGGCATGAGGTAC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTAGCCTGGCTGGAACCTaGAACCAGGACACCTGGCCT +
Preference number: 2 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPSLAGT*NQDTWP
Trigger: AGGCCAGGTGTCCTGGTTCCAGGTTCCAGCCAGGCT...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCAACACCCAACACACTaGAAACTCCTGCCCGATCCA +
Preference number: 2 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCQHPTH*KLLPDP
Trigger: TGGATCGGGCAGGAGTTTTCAGTGTGTTGGGTGTTG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCAGGTGACCACAGGATaGGGATATGGGAAGGTCATT +
Preference number: 2 (lower is better)
Translates to: ALSSPRSSALETRLMEGQQVTTG*GYGKVI
Trigger: AATGACCTTCCCATATCCCCATCCTGTGGTCACCTG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCACCTCAGGCCATGCCTaGCCTCTGAGCTCGGTGAGT +
Preference number: 2 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSTSGHA*PLSSVS
Trigger: ACTCACCGAGCTCAGAGGCCAGGCATGGCCTGAGGT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp AGAACCAGGAAGGCAAGGACAGTGATCATGTTGCTAGAGCCTGCTTaGCACACACGTCATCAACAGACAGCAGTCAACAAGCTGCCTAGG +
Preference number: 2 (lower is better)
Translates to: RTRKARTVIMLLEPA*HTRHQQTAVNKLPR
Trigger: CCTAGGCAGCTTGTTGACTGCTGTCTGTTGATGACGTGTGTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCTTGCCTTCCTGGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGCTGCCTATTTGTGCTaGAGCGGGCTGCAGAACGAC +
Preference number: 2 (lower is better)
Translates to: QWLREQESDQCRSLYIREAAYLC*SGLQND
Trigger: GTCGTTCTGCAGCCCGCTTCAGCACAAATAGGCAGC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGTATTTTAAGAGGCAATaGCTTGGAGCCAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: ALSSPRSSALETRLMEGQYFKRQ*LGAKGR
Trigger: TCTGCCTTTGGCTCCAAGTCATTGCCTCTTAAAATA...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTGTGCTGAAGCGGGCTaGAGAACGACCCGTGTTATC +
Preference number: 2 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSCAEAG*RTTRVI
Trigger: GATAACACGGGTCGTTCTGCAGCCCGCTTCAGCACA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCAGCAGTCAACAAGCTaGCTAGGGCCTCTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPQQSTS*LGPLQS
Trigger: GCTCTGCAGAGGCCCTAGGCAGCTTGTTGACTGCTG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTAAATTCACTGCGATCTaGAAGCCCTGGCAACCAACC +
Preference number: 2 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPKFTAI*KPWQPT
Trigger: GGTTGGTTGCCAGGGCTTGCAGATCGCAGTGAATTT...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGGCAGAGGCCTATTCTaGACCTCAGGCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTGRGLF*TSGHAW
Trigger: CCAGGCATGGCCTGAGGTGCAGAATAGGCCTCTGCC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTGGAACACCACTCCTTaGTCAGGGCAAGGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSWNTTP*SGQGKG
Trigger: GCCCTTTCCTTGCCCTGAGCAAGGAGTGGTGTTCCA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGGGCAACCCAAAGCCTaGCTGGAACCTGGAACCAGG +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTGQPKA*LEPGTR
Trigger: CCTGGTTCCAGGTTCCAGCCAGGCTTTGGGTTGCCC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCTGTCACCAAACTGGTaGTGCCCCCATGAGACTGGC +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPLSPNW*CPHETG
Trigger: GCCAGTCTCATGGGGGCACCACCAGTTTGGTGACAG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp AACCAACCGAGAGAAAGAACCAGGAAGGCAAGGACAGTGATCATGTaGCTAGAGCCTGCTTTGCACACACGTCATCAACAGACAGCAGTC +
Preference number: 2 (lower is better)
Translates to: NQPRERTRKARTVIM*LEPALHTRHQQTAV
Trigger: GACTGCTGTCTGTTGATGACGTGTGTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCTTGCCTTCCTGGTTCTTTCTCTCGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCAAATTTCTGACCCATaGTGGCAGGCATTGTACCTC +
Preference number: 2 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPQISDP*WQALYL
Trigger: GAGGTACAATGCCTGCCATCATGGGTCAGAAATTTG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGAATACGTCTGAAAGGTaGGGATTTCAAACAGTAGAT +
Preference number: 2 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGNTSER*GFQTVD
Trigger: ATCTACTGTTTGAAATCCTCACCTTTCAGACGTATT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCCACAAAGACCCCAGTaGAAGCGATGGGCAGCATCA +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPPQRPQ*KRWAAS
Trigger: TGATGCTGCCCATCGCTTGCACTGGGGTCTTTGTGG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTGGGAAGTGGAGGTTaGGGTGAGCCAAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLGSGG*GEPRLR
Trigger: GCGCAATCTTGGCTCACCGCAACCTCCACTTCCCAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGCCACCTTCCCTCAATaGCCAACCTACCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHATFPQ*PTYLPG
Trigger: CCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATAGACTGGCCAGACCCTaGCAGCAAAGACTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHRLARP*QQRLGH
Trigger: GTGGCCCAGTCTTTGCTGGCAGGGTCTGGCCAGTCT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGCGATCTGCAAGCCCTaGCAACCAACCGAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPAICKP*QPTERK
Trigger: CTTTCTCTCGGTTGGTTGCCAGGGCTTGCAGATCGC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGAAAGACTGCCTATCCTaGGAAATAAACCTGATCTTC +
Preference number: 2 (lower is better)
Translates to: ALSSPRSSALETRLMEGQKDCLS*EINLIF
Trigger: GAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCCCAACCTACCTGCCTaGGAAGGGCCAAGTTCACTA +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPPNLPA*EGPSSL
Trigger: TAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp GAGGGCCTCTGGCTCCAAGGTAAATTATCTGTTCTCAATAATATCTaGGCTGGCCCTGAGCAATGGCTCAGAGAACAGGAGAGTGACCAA +
Preference number: 2 (lower is better)
Translates to: EGLWLQGKLSVLNNI*AGPEQWLREQESDQ
Trigger: TTGGTCACTCTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAACAGATAATTTACCTTGGAGCCAGAGGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCATCCTTCAAATTTCTaGCCCATGATGGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPHPSNF*PMMAGI
Trigger: AATGCCTGCCATCATGGGTCAGAAATTTGAAGGATG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAGGCATTGTACCTCATaGCTCCTGCTCACCCGCTTT +
Preference number: 2 (lower is better)
Translates to: QWLREQESDQCRSLYIRERHCTS*LLLTRF
Trigger: AAAGCGGGTGAGCAGGAGGCATGAGGTACAATGCCT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAGCCAGGCCTTAAGCTaGCTATTTGTGCTGAAGCGG +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPSQALS*LFVLKR
Trigger: CCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGGCT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTCACCAAACTGGTGGTaGCCCCATGAGACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHSPNWW*PHETGQ
Trigger: CTGGCCAGTCTCATGGGGGCACCACCAGTTTGGTGA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGTCACAGCTGCCTCACTaGCCTTTGCCACTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRSQLPH*PLPLPS
Trigger: AGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGA...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCTTCTGTCACCAAACTaGTGGTGCCCCCATGAGACT +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPLLSPN*WCPHET
Trigger: AGTCTCATGGGGGCACCACCAGTTTGGTGACAGAAG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp GCCCGATCCACAAAGACCCCAGTGCAAGCGATGGGCAGCATCAGATaGATGGAAACCACACCCTTTCATTTAGAATTTTTATGCACACGA +
Preference number: 2 (lower is better)
Translates to: ARSTKTPVQAMGSIR*METTPFHLEFLCTR
Trigger: TCGTGTGCATAAAAATTCTAAATGAAAGGGTGTGGTTTCCATCAATCTGATGCTGCCCATCGCTTGCACTGGGGTCTTTGTGGATCGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGTCATTACTGCCCTCTaGTACAAGCTTACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSVITAL*YKLTLG
Trigger: CCCCAAAGTAAGCTTGTATCAGAGGGCAGTAATGAC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGTGTCCAACTCACAGCTaGCTCACTGGCCTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRCPTHS*LTGLCH
Trigger: GTGGCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACA...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGCTGGCCCTGAGCAATaGCTCAGAGAACAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRAGPEQ*LREQES
Trigger: ACTCTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCTCATGCTCAGCAGTTaGTTTTCCAGGAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPLMLSS*FSRRTG
Trigger: TCCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCCTCAAAACTTCCCATaGGTGCGAGGCCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHPQNFP*VRGPET
Trigger: TGTCTCTGGGCCTCGCACCCATGGGAAGTTTTGAGG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCTCAGATGTCCTTCCCTaGGCTCCTATTTCCCACTTC +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPSDVLP*APISHF
Trigger: GAAGTGGGAAATAGGAGCCCAGGGAAGGACATCTGA...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTaGAACAGGAGTAACAGTGAGAAATGCCCAGTGGTCGTCGGCTTC +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPL*NRSNSEKCPVVVGF
Trigger: GAAGCCGACGACCACTGGGCATTTCTCACTGTTACTCCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTGGGCAGCATCAGATTaGTGGAAACCACACCCTTTC +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTWAASD*WKPHPF
Trigger: GAAAGGGTGTGGTTTCCATCAATCTGATGCTGCCCA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTGGCTGCTTCCTGCCTaGCACTGTTGGCTTAGAAGA +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHWLLPA*HCWLRR
Trigger: TCTTCTAAGCCAACAGTGTCAGGCAGGAAGCAGCCA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCATGTTGCTAGAGCCTaGTTTGCACACACGTCATCA +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPHVARA*FAHTSS
Trigger: TGATGACGTGTGTGCAAAGCAGGCTCTAGCAACATG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCAGGCAAAATTATGGCTaGTTCCTGCCTGACACTGTT +
Preference number: 2 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSRQNYG*FLPDTV
Trigger: AACAGTGTCAGGCAGGAAGCAGCCATAATTTTGCCT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCACAGGATGGGGATATaGGAAGGTCATTACTGCCCT +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTHRMGI*EGHYCP
Trigger: AGGGCAGTAATGACCTTCCCATATCCCCATCCTGTG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGACAACAAGCAAAAGTaGCATACAGTGCAGCCAAAC +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPDNKQK*HTVQPN
Trigger: GTTTGGCTGCACTGTATGTCACTTTTGCTTGTTGTC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTTCACTAAGGCAGTTTaGTGGTGCCAGCCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHFTKAV*WCQPVS
Trigger: GGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGATGCTCCTGGGATGTaGATAAAGAAAATACGTCTG +
Preference number: 2 (lower is better)
Translates to: QWLREQESDQCRSLYIREDAPGM*IKKIRL
Trigger: CAGACGTATTTTCTTTATTCACATCCCAGGAGCATC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCAGAGAACAGGAGAGTaGCCAATGCAGATCCCTTTA +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHQRTGE*PMQIPL
Trigger: TAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGTGCTAAGCACCCTTTaGAGCGGTTGTCTAATTGGA +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRVLSTL*SGCLIG
Trigger: TCCAATTAGACAACCGCTTCAAAGGGTGCTTAGCAC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAAACACTGTTTAAGATaGTGCTTCGTCACCCCCGAT +
Preference number: 2 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTKHCLR*CFVTPD
Trigger: ATCGGGGGTGACGAAGCAGCATCTTAAACAGTGTTT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCTCGCTATTTAAACTGTaGGTGCTTCAGATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: HSALYKVSQENPPTLQYPSLFKL*VLQMSF
Trigger: GAAGGACATCTGAAGCACCCACAGTTTAAATAGCGA...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCAGGAGAGTGACCAATaGAGATCCCTTTACATTAGG +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRQESDQ*RSLYIR
Trigger: CCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTGGGAAGGTCATTACTaGCCTCTGATACAAGCTTAC +
Preference number: 2 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHWEGHY*PLIQAY
Trigger: GTAAGCTTGTATCAGAGGGCAGTAATGACCTTCCCA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGATACAAGCTTACTTTaGGGTCCCATCACTACTCTC +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRDTSLL*GPITTL
Trigger: GAGAGTAGTGATGGGACCCCAAAGTAAGCTTGTATC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCTTATCAACTTCTGCTaGGGTCAATGGTCAACAGAA +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRLINFC*GQWSTE
Trigger: TTCTGTTGACCATTGACCTCAGCAGAAGTTGATAAG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAAAAGTGACATACAGTaGAGCCAAACAGTTCACTTA +
Preference number: 2 (lower is better)
Translates to: QWLREQESDQCRSLYIREKSDIQ*SQTVHL
Trigger: TAAGTGAACTGTTTGGCTGCACTGTATGTCACTTTT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAATAGTTCCTTAAAATaGATGCTCCTGGGATGTGAA +
Preference number: 2 (lower is better)
Translates to: QWLREQESDQCRSLYIRENSSLK*MLLGCE
Trigger: TTCACATCCCAGGAGCATCCATTTTAAGGAACTATT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGTGCATATTGGATCTATaGAAATCCTTCTGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRCILDL*KSFCFG
Trigger: GCCAAAGCAGAAGGATTTTCATAGATCCAATATGCA...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 90 bp GGAAACAGGCCAAAATGGCTAACCAATCAGAAATATGCTTCAGTTTaGTTGCCTCCACCCCCAAATATTAAGGAACAGACAATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: GNRPKWLTNQKYASV*LPPPPNIKEQTISD
Trigger: ATCAGAAATTGTCTGTTCCTTAATATTTGGGGGTGGAGGCAACAAAACTGAAGCATATTTCTGATTGGTTAGCCATTTTGGCCTGTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp CAAACTGGTGGTGCCCCCATGAGACTGGCCAGACCCTaGCAGCAAAGACTGGGCCACCTTCCCTCAATGCCC +
Preference number: 3 (lower is better)
Translates to: QTGGAPMRLARP*QQRLGHLPSMP
Trigger: GGGCATTGAGGGAAGGTGGCCCAGTCTTTGCTGGCAGGGTCTGGCCAGTCTCATGGGGGCACCACCAGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp CCAGGCCTTAAGCTGCCTATTTGTGCTGAAGCGGGCTaGAGAACGACCCGTGTTATCCACCCTGAGCACCAC +
Preference number: 3 (lower is better)
Translates to: PGLKLPICAEAG*RTTRVIHPEHH
Trigger: GTGGTGCTCAGGGTGGATAACACGGGTCGTTCTGCAGCCCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp AGATCAACCCCACAGCCTGTGAGCCAGGCCTTAAGCTaGCTATTTGTGCTGAAGCGGGCTGCAGAACGACCC +
Preference number: 3 (lower is better)
Translates to: RSTPQPVSQALS*LFVLKRAAERP
Trigger: GGGTCGTTCTGCAGCCCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGGCTCACAGGCTGTGGGGTTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 72 bp CTGGGCCACCTTCCCTCAATGCCCAACCTACCTGCCTaGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: LGHLPSMPNLPA*EGPSSLRQFGG
Trigger: ACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp AAGACTGGGCCACCTTCCCTCAATGCCCAACCTACCTaGCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: KTGPPSLNAQPT*LGRAKFTKAVW
Trigger: CCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGCCCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGAAGAGCAGCCTTGTTaGTGGAACACCACTCCTTGC +
Preference number: 3 (lower is better)
Translates to: ALSSPRSSALETRLMEGQEEQPC*WNTTPC
Trigger: GCAAGGAGTGGTGTTCCACAAACAAGGCTGCTCTTC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp TGCACACACGTCATCAACAGACAGCAGTCAACAAGCTaGCTAGGGCCTCTGCAGAGCCAGATCAACCCCACA +
Preference number: 3 (lower is better)
Translates to: CTHVINRQQSTS*LGPLQSQINPT
Trigger: TGTGGGGTTGATCTGGCTCTGCAGAGGCCCTAGGCAGCTTGTTGACTGCTGTCTGTTGATGACGTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 72 bp TGCCTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTaGTGCCAGCCAGTTTCCTTACCACCTCCTAAGTCC +
Preference number: 3 (lower is better)
Translates to: CLGRAKFTKAVW*CQPVSLPPPKS
Trigger: GGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp ATAGGAAGGAGCAACACCCAACACACTGAAAACTCCTaGCCGATCCACAAAGACCCCAGTGCAAGCGATGGG +
Preference number: 3 (lower is better)
Translates to: IGRSNTQHTENS*PIHKDPSASDG
Trigger: CCCATCGCTTGCACTGGGGTCTTTGTGGATCGGGCAGGAGTTTTCAGTGTGTTGGGTGTTGCTCCTTCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp CTGGGAAGGGCCAAGTTCACTAAGGCAGTTTGGTGGTaGCAGCCAGTTTCCTTACCACCTCCTAAGTCCATG +
Preference number: 3 (lower is better)
Translates to: LGRAKFTKAVWW*QPVSLPPPKSM
Trigger: CATGGACTTAGGAGGTGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAACTTGGCCCTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGAGCAAGTCACATCCTaGTTTGCACTGTATGAGGCT +
Preference number: 3 (lower is better)
Translates to: ALSSPRSSALETRLMEGQEQVTS*FALYEA
Trigger: AGCCTCATACAGTGCAAACAAGGATGTGACTTGCTC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp CAAAAGACACATAGGAAGGAGCAACACCCAACACACTaGAAACTCCTGCCCGATCCACAAAGACCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: QKTHRKEQHPTH*KLLPDPQRPQC
Trigger: GCACTGGGGTCTTTGTGGATCGGGCAGGAGTTTTCAGTGTGTTGGGTGTTGCTCCTTCCTATGTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp AACAGCGATGTTCCCCAAGGAAAATTCACTGCGATCTaGAAGCCCTGGCAACCAACCGAGAGAAAGAACCAG +
Preference number: 3 (lower is better)
Translates to: NSDVPQGKFTAI*KPWQPTERKNQ
Trigger: CTGGTTCTTTCTCTCGGTTGGTTGCCAGGGCTTGCAGATCGCAGTGAATTTTCCTTGGGGAACATCGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCACTCATGCTCAGCAGTaGGTTTTCCAGGAGGACTGG +
Preference number: 3 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSTHAQQ*VFQEDW
Trigger: CCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAGT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp GTCCATGAACCCCAATCCCTGGTGCTAAGCACCCTTTaGAGCGGTTGTCTAATTGGAGATGTTAGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: VHEPQSLVLSTL*SGCLIGDVSRS
Trigger: GCTCCTACTAACATCTCCAATTAGACAACCGCTTCAAAGGGTGCTTAGCACCAGGGATTGGGGTTCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCTGAGGCAGAATTGCTaGAACCTGGGAAGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: HSALYKVSQENPPTLQYPLRQNC*NLGSGG
Trigger: ACCTCCACTTCCCAGGTTCAAGCAATTCTGCCTCAG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp GGAGGACTGGAAACCTCCTGCCTTATCAACTTCTGCTaGGGTCAATGGTCAACAGAAGCCACAATCCTTTTG +
Preference number: 3 (lower is better)
Translates to: GGLETSCLINFC*GQWSTEATILL
Trigger: CAAAAGGATTGTGGCTTCTGTTGACCATTGACCTCAGCAGAAGTTGATAAGGCAGGAGGTTTCCAGTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp ACAGGATGGGGATATGGGAAGGTCATTACTGCCCTCTaGTACAAGCTTACTTTGGGGTCCCATCACTACTCT +
Preference number: 3 (lower is better)
Translates to: TGWGYGKVITAL*YKLTLGSHHYS
Trigger: AGAGTAGTGATGGGACCCCAAAGTAAGCTTGTATCAGAGGGCAGTAATGACCTTCCCATATCCCCATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCCACCACTGCCCTCTTaGTCTGTCCCTGAACATCCT +
Preference number: 3 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRPPLPS*SVPEHP
Trigger: AGGATGTTCAGGGACAGACAAAGAGGGCAGTGGTGG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAGGACAGTGATCATGTaGCTAGAGCCTGCTTTGCAC +
Preference number: 3 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTRTVIM*LEPALH
Trigger: GTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTGAGCTCGGTGAGTTaGGTCAGCACTCATGACTAT +
Preference number: 3 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLSSVS*VSTHDY
Trigger: ATAGTCATGAGTGCTGACCAAACTCACCGAGCTCAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTTAGAAGAGCAGCCTaGTTTGTGGAACACCACTCC +
Preference number: 3 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLRRAA*FVEHHS
Trigger: GGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp GCACACAGGGAAGGCTTGCATAGATTGAGCGGTTGCTaGGAATGCATAATAGTGTTTCCCTATGGACAGTCT +
Preference number: 3 (lower is better)
Translates to: AHREGLHRLSGC*ECIIVFPYGQS
Trigger: AGACTGTCCATAGGGAAACACTATTATGCATTCTCAGCAACCGCTCAATCTATGCAAGCCTTCCCTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGGTGCTAAGCACCCTTaGAAGCGGTTGTCTAATTGG +
Preference number: 3 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRGAKHP*KRLSNW
Trigger: CCAATTAGACAACCGCTTCAAAGGGTGCTTAGCACC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCATCAGTCCACAGCCTaGACCCTGAAAATAAAACTC +
Preference number: 3 (lower is better)
Translates to: HSALYKVSQENPPTLQYPHQSTA*TLKIKL
Trigger: GAGTTTTATTTTCAGGGTCAAGGCTGTGGACTGATG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR GCA 72 bp GGCCACATGGGACAACGACCATCAAGCTACACATATTaGACCAAGGTAAGTGCTTTTCTTTTCACACCTCAA +
Preference number: 3 (lower is better)
Translates to: GHMGQRPSSYTY*TKVSAFLFTPQ
Trigger: TTGAGGTGTGAAAAGAAAAGCACTTACCTTGGTGCAATATGTGTAGCTTGATGGTCGTTGTCCCATGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 72 bp GGCTCCAAGGTAAATTATCTGTTCTCAATAATATCTTaGCTGGCCCTGAGCAATGGCTCAGAGAACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GSKVNYLFSIIS*LALSNGSENRR
Trigger: TCTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAACAGATAATTTACCTTGGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 72 bp TCCCTGAACATCCTTGCTAAAGGCAGGGAGGGCCTCTaGCTCCAAGGTAAATTATCTGTTCTCAATAATATC +
Preference number: 3 (lower is better)
Translates to: SLNILAKGREGL*LQGKLSVLNNI
Trigger: GATATTATTGAGAACAGATAATTTACCTTGGAGCCAGAGGCCCTCCCTGCCTTTAGCAAGGATGTTCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CCA 72 bp GGAAGGTCATTACTGCCCTCTGATACAAGCTTACTTTaGGGTCCCATCACTACTCTCTCAGAAGTTGTAAAC +
Preference number: 3 (lower is better)
Translates to: GRSLLPSDTSLL*GPITTLSEVVN
Trigger: GTTTACAACTTCTGAGAGAGTAGTGATGGGACCCCAAAGTAAGCTTGTATCAGAGGGCAGTAATGACCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGTTCTCAATAATATCTaGGCTGGCCCTGAGCAATGG +
Preference number: 3 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHVLNNI*AGPEQW
Trigger: CCATTGCTCAGGGCCAGCCAAGATATTATTGAGAAC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATATTATCACCCAATTTTaGGCCCAACAGGCACACCAC +
Preference number: 3 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHIITQF*AQQAHH
Trigger: GTGGTGTGCCTGTTGGGCCAAAAATTGGGTGATAAT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp CTTCACATCTTAAGGCCCCTCCTGGGCTTTGTACCATaGTCTCCTTCTAAACGGAGGTGGAATTCAATAAAT +
Preference number: 3 (lower is better)
Translates to: LHILRPLLGFVP*SPSKRRWNSIN
Trigger: ATTTATTGAATTCCACCTCCGTTTAGAAGGAGATCATGGTACAAAGCCCAGGAGGGGCCTTAAGATGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAAGTCACATCCTTGTTaGCACTGTATGAGGCTGTAT +
Preference number: 3 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTKSHPC*HCMRLY
Trigger: ATACAGCCTCATACAGTGCAAACAAGGATGTGACTT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTATGCTTCAGTTTTGTaGCCTCCACCCCCAAATATT +
Preference number: 3 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHYASVL*PPPPNI
Trigger: AATATTTGGGGGTGGAGGCAACAAAACTGAAGCATA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR TCA 72 bp TTGGTCAGCACTCATGACTATGTTAATATAGCCTGTTaGGGGAAACTTTTCATGCTAGTATGGATTGTATCT +
Preference number: 3 (lower is better)
Translates to: LVSTHDYVNIAC*GKLFMLVWIVS
Trigger: AGATACAATCCATACTAGCATGAAAAGTTTCCCTCAACAGGCTATATTAACATAGTCATGAGTGCTGACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCCCGGGAACAGGGGCTaGAGAGAAAGTCTGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGPGNRG*RESLRW
Trigger: CCAGCGCAGACTTTCTCTTCAGCCCCTGTTCCCGGG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGAGAGAAAGTCTGCGCTaGGAGCTGCAGGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQRESLR*ELQAGP
Trigger: GGGCCCAGCCTGCAGCTCCCAGCGCAGACTTTCTCT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGACACTGAGGCCAATCTaGTGGACAGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGTLRPI*WTELPG
Trigger: CCCAGGGAGCTCTGTCCAGCAGATTGGCCTCAGTGT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGCCACCTTCCCTCAATaGCCAACCTACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQATFPQ*PTYLPG
Trigger: CCCAGGCAGGTAGGTTGGGCATTGAGGGAAGGTGGC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCTGGGAGCTGCAGGCTaGGCCCATCAGGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPLGAAG*AHQEPG
Trigger: CCCAGGCTCCTGATGGGCCCAGCCTGCAGCTCCCAG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCTGGGAAGTGGAGGTTaGGGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQLGSGG*GEPRLR
Trigger: GCGCAATCTTGGCTCACCGCAACCTCCACTTCCCAG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGCTCATGTTGCCCCCTaGCACCCATGCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCAHVAP*HPCLPK
Trigger: TTTGGGGAGGCATGGGTGGCAGGGGGCAACATGAGC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCTGAGGCCAATCTGCTaGACAGAGCTCCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQLRPIC*TELPGL
Trigger: TAGCCCAGGGAGCTCTGTCCAGCAGATTGGCCTCAG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGAGCCCTTTCTCCTGCTaGATGCCCGCTCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQSPFSC*MPAPLQ
Trigger: CTGCAAAGGAGCGGGCATCCAGCAGGAGAAAGGGCT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTGCCACTGCCGCTGCTaGTGCAGAAGCCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPCHCRC*CRSPSN
Trigger: GTTGCTGGGGCTTCTGCATCAGCAGCGGCAGTGGCA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGATCTCCTCCTCCCCCTaGAGTAGTGCTTCAATGGGA +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGISSSP*SSASMG
Trigger: TCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGAT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCCACAAAGACCCCAGTaGAAGCGATGGGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQPQRPQ*KRWAAS
Trigger: TGATGCTGCCCATCGCTTGCACTGGGGTCTTTGTGG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCAGCAGTCAACAAGCTaGCTAGGGCCTCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCQQSTS*LGPLQS
Trigger: GCTCTGCAGAGGCCCTAGGCAGCTTGTTGACTGCTG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCCAAGATTGCGCCACTaGACTCCAGCCAGGGCAACA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCPRLRH*TPARAT
Trigger: TGTTGCCCTGGCTGGAGTGCAGTGGCGCAATCTTGG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCCAAATGCAGCTTGCTaGGAGCCAGGTCCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCPNAAC*EPGPRE
Trigger: CTCCCTAGGACCTGGCTCCCAGCAAGCTGCATTTGG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCAAAGTCCTGGTACAATaGGCTGCGGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCKVLVQ*AAVPGG
Trigger: ACCCCCAGGCACCGCAGCCCATTGTACCAGGACTTT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCTGTCACCAAACTGGTaGTGCCCCCATGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCLSPNW*CPHETG
Trigger: GCCAGTCTCATGGGGGCACCACCAGTTTGGTGACAG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCCTGAGGGGGCGCCCTaGGGCACACAGGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSPEGAP*GTQGRL
Trigger: AAGCCTTCCCTGTGTGCCCCAGGGCGCCCCCTCAGG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTTCCACAGCCATCGTaGTCGCACCGAAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGFPQPS*SHRNGF
Trigger: AAAGCCATTTCGGTGCGATCACGATGGCTGTGGAAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCACCTCCTAAGTCCATaGACCCCAATCCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCHLLSP*TPIPGA
Trigger: AGCACCAGGGATTGGGGTTCATGGACTTAGGAGGTG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCTGCAGAGTCCCGGCATaGACACTGACACTGACATGC +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCCRVPA*TLTLTC
Trigger: GCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCA...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGTCTGCGCTGGGAGCTaGAGGCTGGGCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSVCAGS*RLGPSG
Trigger: TCCTGATGGGCCCAGCCTGCAGCTCCCAGCGCAGAC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCATTGTGCTGAGGTCCTaGCCCTGGGTCGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCIVLRS*PWVVLE
Trigger: TTCCAGTACGACCCAGGGCCAGGACCTCAGCACAAT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCAGGTGACCACAGGATaGGGATATGGGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGQVTTG*GYGKVI
Trigger: AATGACCTTCCCATATCCCCATCCTGTGGTCACCTG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCCCAACCTACCTGCCTaGGAAGGGCCAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCPNLPA*EGPSSL
Trigger: TAGTGAACTTGGCCCTTCCCAGGCAGGTAGGTTGGG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGGAGCAGTATGGAAATaGCTCATGTTGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCGAVWK*LMLPPA
Trigger: GGCAGGGGGCAACATGAGCCATTTCCATACTGCTCC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGGCTCTTGCCTTTCCTaGCTAGAAGATCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQGSCLS*LEDLSQ
Trigger: CTGGCTCAGATCTTCTAGCCAGGAAAGGCAAGAGCC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTGGTGGTGCCCCCATaGGACTGGCCAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLVVPP*DWPDPA
Trigger: GGCAGGGTCTGGCCAGTCTCATGGGGGCACCACCAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTAGCAGCCCTTTCTCCTaGTGGATGCCCGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPSSPFS*WMPAPL
Trigger: CAAAGGAGCGGGCATCCAGCAGGAGAAAGGGCTGCT...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGCTGAAGAGAAAGTCTaGGCTGGGAGCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPAEEKV*AGSCRL
Trigger: CAGCCTGCAGCTCCCAGCGCAGACTTTCTCTTCAGC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGGCCCATCAGGAGCCTaGGGGCTCGGCTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRGPSGA*GLGSGG
Trigger: CCCTCCAGAGCCGAGCCCCCAGGCTCCTGATGGGCC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGCAGTAGTGCTTCAATaGGAATCAGATTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQAVVLQ*ESDWTG
Trigger: CCCCGTCCAATCTGATTCCCATTGAAGCACTACTGC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCATCCTTCAAATTTCTaGCCCATGATGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGHPSNF*PMMAGI
Trigger: AATGCCTGCCATCATGGGTCAGAAATTTGAAGGATG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCTGCCACTGCCCTCTCTaGTGGAGCAAGGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPCHCPL*WSKGLA
Trigger: GGCCAGACCCTTGCTCCATCAGAGAGGGCAGTGGCA...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTCCGGACATTCCGACTaGAGAGTGAGGGTTGCACCT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPSGHSD*RVRVAP
Trigger: AGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGGTGGGTTCGCAGGTTaGCTGCTGTGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSGGFAG*LLCCRC
Trigger: GCACCTACAGCACAGCAGGCAACCTGCGAACCCACC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTGTCCAACTCACAGCTaGCTCACTGGCCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPCPTHS*LTGLCH
Trigger: GTGGCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGCCCCCTGCCACCCATaGCTCCCCAAACATATTTCT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPAPCHP*LPKHIS
Trigger: AGAAATATGTTTGGGGAGGCATGGGTGGCAGGGGGC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTCTTGGCATGGGTGTaGAACCAGGGTTTATTGTCA +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGFLAWV*NQGLLS
Trigger: TGACAATAAACCCTGGTTCCACACCCATGCCAAGAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGCGATCTGCAAGCCCTaGCAACCAACCGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPAICKP*QPTERK
Trigger: CTTTCTCTCGGTTGGTTGCCAGGGCTTGCAGATCGC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCAGCCTGGCTGGAACCTaGAACCAGGACACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSSLAGT*NQDTWP
Trigger: AGGCCAGGTGTCCTGGTTCCAGGTTCCAGCCAGGCT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGGGCAACCCAAAGCCTaGCTGGAACCTGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSGQPKA*LEPGTR
Trigger: CCTGGTTCCAGGTTCCAGCCAGGCTTTGGGTTGCCC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTCTCAATAATATCTTaGCTGGCCCTGAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGFSIIS*LALSNG
Trigger: GCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCCTCAAAACTTCCCATaGGTGCGAGGCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPPQNFP*VRGPET
Trigger: TGTCTCTGGGCCTCGCACCCATGGGAAGTTTTGAGG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGCCTGTACAGTGTGTTaGATGCCTTCTCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPACTVC*MPSHSP
Trigger: AGGGCTGTGAGAAGGCATTCAACACACTGTACAGGC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGGTTCGCAGGTTGCCTaGTGTGCTGTAGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTGSQVA*CAVGAG
Trigger: CCCCGCACCTACAGCACAGCAGGCAACCTGCGAACC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCCTGGTACAATGGGCTaGGGTGCCTGGGGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHPGTMG*GAWGCG
Trigger: TCCGCACCCCCAGGCACCGCAGCCCATTGTACCAGG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGGCAGAGGCCTATTCTaGACCTCAGGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPGRGLF*TSGHAW
Trigger: CCAGGCATGGCCTGAGGTGCAGAATAGGCCTCTGCC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGTGGGAAGGTCATTACTaGCCTCTGATACAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQWEGHY*PLIQAY
Trigger: GTAAGCTTGTATCAGAGGGCAGTAATGACCTTCCCA...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAGACTGGCCAGACCCTaGCAGCAAAGACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRERLARP*QQRLGH
Trigger: GTGGCCCAGTCTTTGCTGGCAGGGTCTGGCCAGTCT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCTGAGGTCCTGGCCCTaGGTCGTACTGGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPLRSWP*VVLEFS
Trigger: AGAAAATTCCAGTACGACCCAGGGCCAGGACCTCAG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCATGGGCTGCGGTGCCTaGGGGTGCGGAAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPMGCGA*GCGRNS
Trigger: AGAGTTTCTTCCGCACCCCCAGGCACCGCAGCCCAT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCCTGCCAGCAAAGACTaGGCCACCTTCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSPASKD*ATFPQC
Trigger: GCATTGAGGGAAGGTGGCCCAGTCTTTGCTGGCAGG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGTGATTTGTATCCTCTaGTCCATTGTGTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQVICIL*SIVLWK
Trigger: CTTCCACAACACAATGGATCAGAGGATACAAATCAC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCTTAATGTTTCTGTCTaGGGGTCTGAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCLNVSV*GSEGVS
Trigger: AGAGACTCCTTCAGACCCTCAGACAGAAACATTAAG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTGGAGAAGCTGCTGGTaGGGCCCATCTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHWRSCW*GPSPPP
Trigger: GGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTCCA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGATGCTCCTGGGATGTaGATAAAGAAAATACGTCTG +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQDAPGM*IKKIRL
Trigger: CAGACGTATTTTCTTTATTCACATCCCAGGAGCATC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGACATGCCACCTCATATaGATTCCCTTAAATCTGCAC +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQTCHLI*IPLNLH
Trigger: GTGCAGATTTAAGGGAATTCATATGAGGTGGCATGT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGGCTTCTCCTTCGTGTaGACTCGCACGTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPGFSFV*TRTWIL
Trigger: CAGGATCCACGTGCGAGTGCACACGAAGGAGAAGCC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGACACTGACACTGACATaGCTCTTCTTGTTTGATGAT +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGTLTLT*LFLFDD
Trigger: ATCATCAAACAAGAAGAGGCATGTCAGTGTCAGTGT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTAAGGCAGTTTGGTGGTaGCAGCCAGTTTCCTTACCA +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPKAVWW*QPVSLP
Trigger: TGGTAAGGAAACTGGCTGGCACCACCAAACTGCCTT...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTGCACCAAGGTAAGTaGTTTTCTTTTCACACCTCA +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLHQGK*FSFHTS
Trigger: TGAGGTGTGAAAAGAAAAGCACTTACCTTGGTGCAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGGCCCTGGGTCGTACTaGAATTTTCTCGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPGPGSY*NFLAIQ
Trigger: CTGAATTGCGAGAAAATTCCAGTACGACCCAGGGCC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTACCTCAGGCCATGCCTaGCCTCTGAGCTCGGTGAGT +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTTSGHA*PLSSVS
Trigger: ACTCACCGAGCTCAGAGGCCAGGCATGGCCTGAGGT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGAAAGACTGCCTATCCTaGGAAATAAACCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGKDCLS*EINLIF
Trigger: GAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTTCACTAAGGCAGTTTaGTGGTGCCAGCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPFTKAV*WCQPVS
Trigger: GGAAACTGGCTGGCACCACCAAACTGCCTTAGTGAA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp ACCTCAGGCCATGCCTGGCCTCTGAGCTCGGTGAGTTaGGTCAGCACTCATGACTATGTTAATATAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TSGHAWPLSSVS*VSTHDYVNIAC
Trigger: ACAGGCTATATTAACATAGTCATGAGTGCTGACCAAACTCACCGAGCTCAGAGGCCAGGCATGGCCTGAGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGATGAATCTGATCTGGTaGGATAATGTGCTGCACATA +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQMNLIW*DNVLHI
Trigger: TATGTGCAGCACATTATCTCACCAGATCAGATTCAT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGTGTACTCTCCTCGGTaGGTCTTCTGGTGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTVYSPR*VFWWVR
Trigger: GCGAACCCACCAGAAGACTCACCGAGGAGAGTACAC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGACTGTATTGAGTGCTaGATGTTTTCTCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCDCIEC*MFSHSH
Trigger: ATGGCTGTGAGAAAACATTCAGCACTCAATACAGTC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCTGGTGAAATTGTGCTaGGGTCCTGGCCCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLVKLC*GPGPGS
Trigger: CGACCCAGGGCCAGGACCTCAGCACAATTTCACCAG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCTATTTTAAGAGGCAATaGCTTGGAGCCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCYFKRQ*LGAKGR
Trigger: TCTGCCTTTGGCTCCAAGTCATTGCCTCTTAAAATA...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTGGCTGCTTCCTGCCTaGCACTGTTGGCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSWLLPA*HCWLRR
Trigger: TCTTCTAAGCCAACAGTGTCAGGCAGGAAGCAGCCA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTACAATGGGCTGCGGTaGCTGGGGGTGCGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTYNGLR*LGVRKK
Trigger: TTTCTTCCGCACCCCCAGGCACCGCAGCCCATTGTA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGGATGCCCGCTCCTTTaGAGAGTCCCGGCATGCACA +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRGCPLL*RVPACT
Trigger: TGTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCTCTGCTTGTCGGCTTTaGTCACAGGAGGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPSACRL*SQEEGK
Trigger: CTTGCCCTCCTCCTGTGAGCAAAGCCGACAAGCAGA...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGAAAAGTGACATACAGTaGAGCCAAACAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGKSDIQ*SQTVHL
Trigger: TAAGTGAACTGTTTGGCTGCACTGTATGTCACTTTT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAATGTGCTGAAGCGGGCTaGAGAACGACCCGTGTTATC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRECAEAG*RTTRVI
Trigger: GATAACACGGGTCGTTCTGCAGCCCGCTTCAGCACA...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCACTGTTTAAGATGCTaGTTCGTCACCCCCGATCTT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPHCLRC*FVTPDL
Trigger: AAGATCGGGGGTGACGAAGCAGCATCTTAAACAGTG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAATGCCCAACCTACCTaGCTGGGAAGGGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRENAQPT*LGRAKF
Trigger: GAACTTGGCCCTTCCCAGGCAGGTAGGTTGGGCATT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGATGCTTCAGTTTTGTTaGCTCCACCCCCAAATATTA +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQMLQFC*LHPQIL
Trigger: TAATATTTGGGGGTGGAGGCAACAAAACTGAAGCAT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGACTGTGTTCCCCCATaGTTCAGTTGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPDCVPP*FSCAQP
Trigger: GGGCTGAGCACAACTGAACCATGGGGGAACACAGTC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGATGATGTTGTTGTCTaGACTGTGTTCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPDDVVV*TVFPHG
Trigger: ACCATGGGGGAACACAGTCCAGACAACAACATCATC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAGTAGTACTTTGTGGTaGGGCTGGTGCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRESSTLW*GWCCHS
Trigger: GCTGTGGCAGCACCAGCCCCACCACAAAGTACTACT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGGGGTGTCCAGGCTCTaGAGGGATAGAAACTCTGAC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPGVSRL*RDRNSD
Trigger: GTCAGAGTTTCTATCCCTCCAGAGCCTGGACACCCC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTGGAACCAGGACACCTaGCCTGCCAATTACATGCCA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSWNQDT*PANYMP
Trigger: TGGCATGTAATTGGCAGGCCAGGTGTCCTGGTTCCA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGGCAGGGAGGGCCTCTaGCTCCAAGGTAAATTATCT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSGREGL*LQGKLS
Trigger: AGATAATTTACCTTGGAGCCAGAGGCCCTCCCTGCC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCAGAAGTCAATTATTCTaGCTAGGGTCCTGGAATGAG +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCRSQLF*LGSWNE
Trigger: CTCATTCCAGGACCCTAGCCAGAATAATTGACTTCT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTGCCACAGCCCTCCTaGTTACAGACAAAGGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLPQPS*LQTKVY
Trigger: GTACACCTTTGTCTGTAATCAGGAGGGCTGTGGCAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGGCTTTTCCCCTGTATaGGTTCGAATGTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSGFSPV*VRMCFL
Trigger: GAGGAAGCACATTCGAACTCATACAGGGGAAAAGCC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAGTTCTGTTCTCCCATaGCTAGGCTGGACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPSSVLP*LGWTAG
Trigger: TCCTGCAGTCCAGCCTAGTCATGGGAGAACAGAACT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGCTGCCTATTTGTGCTaGAGCGGGCTGCAGAACGAC +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRAAYLC*SGLQND
Trigger: GTCGTTCTGCAGCCCGCTTCAGCACAAATAGGCAGC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAATATCTTGGCTGGCCCTaGGCAATGGCTCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREYLGWP*AMAQRT
Trigger: TGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATA...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCAGCACAGGGCTGATTaGGCGGAAAAACGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRQHRAD*AEKRCQ
Trigger: CTGGCAGCGTTTTTCCGCTCAATCAGCCCTGTGCTG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTCACAGCACAGGGCTaGTTGAGCGGAAAAACGCTG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLTAQG*LSGKTL
Trigger: CAGCGTTTTTCCGCTCAATCAGCCCTGTGCTGTGAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCAGATTGAGCGGTTGCTaGGAATGCATAATAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCRLSGC*ECIIVF
Trigger: AAACACTATTATGCATTCTCAGCAACCGCTCAATCT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGAAACTGCATTGAGCTaGGAAAGTGACACTACATTA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCETALS*ESDTTL
Trigger: TAATGTAGTGTCACTTTCTCAGCTCAATGCAGTTTC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCTGCAGAGTGAGGGTTaGACCTTCAATATTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPLQSEG*TFNISW
Trigger: CCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCATGACTAGGCTGGACTaGAGGATAGCTGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSMTRLD*RIAVLG
Trigger: TCCCAACACAGCTATCCTGCAGTCCAGCCTAGTCAT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCTTCTCAACTTTAGATaGTTGCTGAATTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLLNFR*LLNLFL
Trigger: CAAGAACAAATTCAGCAAGCATCTAAAGTTGAGAAG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTCAGGAGAGTGACCAATaGAGATCCCTTTACATTAGG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPQESDQ*RSLYIR
Trigger: CCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTG...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATAGCTCCCTGGGCTACTaGCTACTGGTACTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHSSLGY*LLVLQW
Trigger: CCACTGCAGTACCAGTAGCCAGTAGCCCAGGGAGCT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCTGGACAGAGCTCCCTaGGCTACTGGCTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLDRAP*ATGYWY
Trigger: GTACCAGTAGCCAGTAGCCCAGGGAGCTCTGTCCAG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAACCCAAAGCCTGGCTaGAACCTGGAACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTNPKPG*NLEPGH
Trigger: GTGTCCTGGTTCCAGGTTCCAGCCAGGCTTTGGGTT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGCTGGCCCTGAGCAATaGCTCAGAGAACAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTAGPEQ*LREQES
Trigger: ACTCTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCCTGGAATGAGAAATTaGCTGCTTGTAGTTAAGATT +
Preference number: 4 (lower is better)
Translates to: ALSSPRSSALETRLMEGQPGMRN*LLVVKI
Trigger: AATCTTAACTACAAGCAGCCAATTTCTCATTCCAGG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCAGGCCAGGGCCACATaGGACAACGACCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRQARAT*DNDHQA
Trigger: AGCTTGATGGTCGTTGTCCCATGTGGCCCTGGCCTG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGTGAGAAATGCCCAGTaGTCGTCGGCTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTVRNAQ*SSASPK
Trigger: CTTTGGGGAAGCCGACGACCACTGGGCATTTCTCAC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp AGAGAAAGAACCAGGAAGGCAAGGACAGTGATCATGTaGCTAGAGCCTGCTTTGCACACACGTCATCAACAG +
Preference number: 4 (lower is better)
Translates to: RERTRKARTVIM*LEPALHTRHQQ
Trigger: CTGTTGATGACGTGTGTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCTTGCCTTCCTGGTTCTTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCACATTGATTCAAAGATaGTTGCTGGTGAAATTGTGC +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCTLIQR*LLVKLC
Trigger: GCACAATTTCACCAGCAATCATCTTTGAATCAATGT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCATGGCGGAACATCACTaGCTGACTCTGCATCACCAT +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPMAEHH*LTLHHH
Trigger: ATGGTGATGCAGAGTCAGTCAGTGATGTTCCGCCAT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCTGTTTTGCTATACCCTaGGTAGAAGATCATCGTTTT +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCCFAIP*VEDHRF
Trigger: AAAACGATGATCTTCTACTCAGGGTATAGCAAAACA...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGTTAATATAGCCTGTTaGGGGAAACTTTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCVNIAC*GKLFML
Trigger: TAGCATGAAAAGTTTCCCTCAACAGGCTATATTAAC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGTACAGTGTGTTGAATaGCTTCTCACAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPVQCVE*LLTALH
Trigger: GTGCAGGGCTGTGAGAAGGCATTCAACACACTGTAC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAATCGGAGAGGCCAGGTTaGAGTACAAGTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRESERPG*STSGRD
Trigger: ATCTCTTCCACTTGTACTGCAACCTGGCCTCTCCGA...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCTTTCTCCTGCTGGATaGCCGCTCCTTTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRLSPAG*PLLCRV
Trigger: GACTCTGCAAAGGAGCGGGCATCCAGCAGGAGAAAG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGGCTGGAGGCCTTTTTaGTTAAGGAACCAACACAGG +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREGWRPF*LRNQHR
Trigger: CCTGTGTTGGTTCCTTAAGCAAAAAGGCCTCCAGCC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCACGTCACACTCAAATaGCTTCTCCTTCGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPHVTLK*LLLRVH
Trigger: GTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAACAACAGAAAGTCCTaGTACAATGGGCTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPNNRKS*YNGLRC
Trigger: GCACCGCAGCCCATTGTACCAGGACTTTCTGTTGTT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCTCAGTAGTACTTTGTaGTGGGGCTGGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRLSSTL*WGWCCH
Trigger: GTGGCAGCACCAGCCCCACCACAAAGTACTACTGAG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAGAGGTGAGCACACATaGGCCCTTCACTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTRGEHT*ALHLEK
Trigger: CTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTTCATTTCCCAAGTTTaGGAAACCACACTCACCATG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPFISQV*ETTLTM
Trigger: CATGGTGAGTGTGGTTTCCCAAACTTGGGAAATGAA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGTATGGGGAGCAGTATaGAAATGGCTCATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREVWGAV*KWLMLP
Trigger: GGGCAACATGAGCCATTTCCATACTGCTCCCCATAC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGGATTTAATGAAGGCTaGAGGCCTTTTTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPGFNEG*RPFCLR
Trigger: CCTTAAGCAAAAAGGCCTCCAGCCTTCATTAAATCC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAATAAACAGTTCCAGATaGGGAAGGCACCAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREINSSR*GRHQSV
Trigger: AACGGACTGGTGCCTTCCTCATCTGGAACTGTTTAT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTTGGAAGTGCATTGTATaGGTGTCCTTTGTTATCATG +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPWKCIV*VSFVIM
Trigger: CATGATAACAAAGGACACTCATACAATGCACTTCCA...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCAACACCCAACACACTaGAAACTCCTGCCCGATCCA +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHQHPTH*KLLPDP
Trigger: TGGATCGGGCAGGAGTTTTCAGTGTGTTGGGTGTTG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAACAGAGAACAGGAGAGTaGCCAATGCAGATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREQRTGE*PMQIPL
Trigger: TAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTG...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATAACCCAAATCCCAGGTaGCCACAGGATGGGGATATG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHNPNPR*PQDGDM
Trigger: CATATCCCCATCCTGTGGTCACCTGGGATTTGGGTT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAAGGCTTGCATAGATTaGGCGGTTGCTGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPKACID*AVAENA
Trigger: TGCATTCTCAGCAACCGCTCAATCTATGCAAGCCTT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAAAGTGCCAGGGTCCTaGTCAATAAGAACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPKVPGS*SIRTVV
Trigger: GACCACTGTTCTTATTGAGCAGGACCCTGGCACTTT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATAGCCAGGCCTTAAGCTaGCTATTTGTGCTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHSQALS*LFVLKR
Trigger: CCGCTTCAGCACAAATAGGCAGCTTAAGGCCTGGCT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAGGCTGAGGCAGAATTaGTTGAACCTGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTRLRQN*LNLGSG
Trigger: TCCACTTCCCAGGTTCAAGCAATTCTGCCTCAGCCT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGTTTTCCAGGAGGACTaGAAACCTCCTGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPVFQED*KPPALS
Trigger: TGATAAGGCAGGAGGTTTCCAGTCCTCCTGGAAAAC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTCAGATGTCCTTCCCTaGGCTCCTATTTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTSDVLP*APISHF
Trigger: GAAGTGGGAAATAGGAGCCCAGGGAAGGACATCTGA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCCAACACAGGTAGTATaGGGAGCAGTATGGAAATGG +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPPTQVV*GAVWKW
Trigger: CCATTTCCATACTGCTCCCCATACTACCTGTGTTGG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGAATTGAAGATAAAATaGGGGAGGTGGAGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPELKIK*GRWSKG
Trigger: TCCTTTACTCCACCTCCCCCATTTTATCTTCAATTC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp GGGCCACATGGGACAACGACCATCAAGCTACACATATaGCACCAAGGTAAGTGCTTTTCTTTTCACACCTCA +
Preference number: 4 (lower is better)
Translates to: GPHGTTTIKLHI*HQGKCFSFHTS
Trigger: TGAGGTGTGAAAAGAAAAGCACTTACCTTGGTGCAATATGTGTAGCTTGATGGTCGTTGTCCCATGTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp CCACATTCTCCAAAACACAACGAAGGATGTAGACTGTaGAGTCAAATAGCCCTTGGGAGGCCTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: PHSPKHNEGCRL*SQIALGRPENT
Trigger: TGTGTTCTCAGGCCTCCCAAGGGCTATTTGACTCAACAGTCTACATCCTTCGTTGTGTTTTGGAGAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAACTGCCTCAAAGTAGATaGTGTTGTTGTCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRELPQSR*CCCLDC
Trigger: ACAGTCCAGACAACAACATCATCTACTTTGAGGCAG...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGTATGTGTACGAACGTaGGTTTTAAGGTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPVCVRT*VLRWWL
Trigger: AAGCCACCACCTTAAAACTCACGTTCGTACACATAC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAACGGAACATCACTGACTaGCTCTGCATCACCATTAAA +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRERNITD*LCITIK
Trigger: TTTAATGGTGATGCAGAGTCAGTCAGTGATGTTCCG...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCAAATTTCTGACCCATaGTGGCAGGCATTGTACCTC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTQISDP*WQALYL
Trigger: GAGGTACAATGCCTGCCATCATGGGTCAGAAATTTG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGACAACAAGCAAAAGTaGCATACAGTGCAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREDNKQK*HTVQPN
Trigger: GTTTGGCTGCACTGTATGTCACTTTTGCTTGTTGTC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTGGGCAGCATCAGATTaGTGGAAACCACACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHWAASD*WKPHPF
Trigger: GAAAGGGTGTGGTTTCCATCAATCTGATGCTGCCCA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTGTGCTAAGCACCCTTTaGAGCGGTTGTCTAATTGGA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTVLSTL*SGCLIG
Trigger: TCCAATTAGACAACCGCTTCAAAGGGTGCTTAGCAC...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCTGGGCTTTGTACCATaGTCTCCTTCTAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLGFVP*SPSKRR
Trigger: CCTCCGTTTAGAAGGAGATCATGGTACAAAGCCCAG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCATAACCCTGGGACATTaGTTCATGATCTATCAGGTG +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSITLGH*FMIYQV
Trigger: CACCTGATAGATCATGAAGCAATGTCCCAGGGTTAT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAAGGTGGTGGCTTGCTaGAAATGCTTTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRKVVAC*KCFSTA
Trigger: GGCTGTGGAAAAGCATTTGCAGCAAGCCACCACCTT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTTAAGGTGGTGGCTTaGTGCAAATGCTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSFKVVA*CKCFST
Trigger: TGTGGAAAAGCATTTGCAGCAAGCCACCACCTTAAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAAACACTGTTTAAGATaGTGCTTCGTCACCCCCGAT +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREKHCLR*CFVTPD
Trigger: ATCGGGGGTGACGAAGCAGCATCTTAAACAGTGTTT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAACCAATATGAGGTTCTaGAAACTTGTCCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIRETNMRF*KLVPLD
Trigger: GTCCAGAGGGACAAGTTTGCAGAACCTCATATTGGT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAGTAACAGTGAGAAATaGCCAGTGGTCGTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRSNSEK*PVVVGF
Trigger: GAAGCCGACGACCACTGGGCATTTCTCACTGTTACT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAGCTGTGTTGGGAGTTaGGGTGATGGTTATTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRSCVGS*GDGYCG
Trigger: CCCACAATAACCATCACCCCAACTCCCAACACAGCT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCTCATGCTCAGCAGTTaGTTTTCCAGGAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLMLSS*FSRRTG
Trigger: TCCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGATACAAGCTTACTTTaGGGTCCCATCACTACTCTC +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPDTSLL*GPITTL
Trigger: GAGAGTAGTGATGGGACCCCAAAGTAAGCTTGTATC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCAGAAAGCCTCTGACTTaGCACACTACGAGGATAACA +
Preference number: 4 (lower is better)
Translates to: HSALYKVSQENPPTLQYPRKPLT*HTTRIT
Trigger: TGTTATCCTCGTAGTGTGCCAAGTCAGAGGCTTTCT...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTTTCACATCGCTCAGTaGAAGTCCGTTGTTCCCATG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTFHIAQ*KSVVPM
Trigger: CATGGGAACAACGGACTTCCACTGAGCGATGTGAAA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp TGGCTCCAAGGTAAATTATCTGTTCTCAATAATATCTaGGCTGGCCCTGAGCAATGGCTCAGAGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: WLQGKLSVLNNI*AGPEQWLREQE
Trigger: CTCCTGTTCTCTGAGCCATTGCTCAGGGCCAGCCAAGATATTATTGAGAACAGATAATTTACCTTGGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCTTAGACAAAGTGAGTaGTTTGTATCCTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLRQSE*FVSSDP
Trigger: TGGATCAGAGGATACAAATCACTCACTTTGTCTAAG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTAAAGATGATTGCTGGTaGAATTGTGCTGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTKDDCW*NCAEVL
Trigger: CAGGACCTCAGCACAATTTCACCAGCAATCATCTTT...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGTCATTACTGCCCTCTaGTACAAGCTTACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHVITAL*YKLTLG
Trigger: CCCCAAAGTAAGCTTGTATCAGAGGGCAGTAATGAC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGTGGAATTCAATAAATaGCACCACTTCTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSVEFNK*HHFCHQ
Trigger: TTGGTGACAGAAGTGGTGTCATTTATTGAATTCCAC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGTGAAGCCTCTGATGTaGTTTCAGCCTGTACAGTGT +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHVKPLM*FQPVQC
Trigger: ACACTGTACAGGCTGAAAGCACATCAGAGGCTTCAC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGTCTCACAGCCATTACTaGGGCAGAAGAAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRSHSHY*GRRRVF
Trigger: AAAGACCCTTCTTCTGCCCCAGTAATGGCTGTGAGA...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTCACAACCACTCACTaGCATTTTAAGCACATTCCT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSFTTTH*HFKHIP
Trigger: AGGAATGTGCTTAAAATGCCAGTGAGTGGTTGTGAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATACTAAGGCAGTTTGGTaGTGCCAGCCAGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHTKAVW*CQPVSL
Trigger: TAAGGAAACTGGCTGGCACCACCAAACTGCCTTAGT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCCTTCTAAACGGAGGTaGAATTCAATAAATGACACC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSPSKRR*NSINDT
Trigger: GGTGTCATTTATTGAATTCCACCTCCGTTTAGAAGG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGCAAACTTGTCCCTCTaGACACATTCAGCATTATAC +
Preference number: 4 (lower is better)
Translates to: QWLREQESDQCRSLYIREANLSL*THSALY
Trigger: GTATAATGCTGAATGTGTCCAGAGGGACAAGTTTGC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
3UTR CAA 72 bp AATCACATGACTAAGCTGAGCAAGTCACATCCTTGTTaGCACTGTATGAGGCTGTATGCAAAATCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NHMTKLSKSHPC*HCMRLYAKSRG
Trigger: CCCTCTGGATTTTGCATACAGCCTCATACAGTGCAAACAAGGATGTGACTTGCTCAGCTTAGTCATGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCTTTTGAGACTGTATTaGGTGCTGAATGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLLRLY*VLNVFS
Trigger: TGAGAAAACATTCAGCACTCAATACAGTCTCAAAAG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCAATACGTCTGAAAGGTaGGGATTTCAAACAGTAGAT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSNTSER*GFQTVD
Trigger: ATCTACTGTTTGAAATCCTCACCTTTCAGACGTATT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTTATCAACTTCTGCTaGGGTCAATGGTCAACAGAA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLINFC*GQWSTE
Trigger: TTCTGTTGACCATTGACCTCAGCAGAAGTTGATAAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCAACCAATCAGAAATATaGTTCAGTTTTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSNQSEI*FSFVAS
Trigger: GGAGGCAACAAAACTGAAGCATATTTCTGATTGGTT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATACCTTCAATATTTCTTaGCATGGGTGTGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHTFNIS*HGCGTR
Trigger: CCTGGTTCCACACCCATGCCAAGAAATATTGAAGGT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGCAATTCAGAATCTGTaGACAGAAGGCTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHAIQNL*TEGSSH
Trigger: GTGACTTGAGCCTTCTGTCCACAGATTCTGAATTGC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTTGTGGAGAACTGGTaGCACCATTTAATATCCATT +
Preference number: 4 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSFVENW*HHLISI
Trigger: AATGGATATTAAATGGTGCCACCAGTTCTCCACAAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTGCATATTGGATCTATaGAAATCCTTCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTCILDL*KSFCFG
Trigger: GCCAAAGCAGAAGGATTTTCATAGATCCAATATGCA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTTCCTTTGGAAGTACTaGACCTGTAACGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTFLWKY*TCNVFT
Trigger: TGTGAAAACGTTACAGGTTCAGTACTTCCAAAGGAA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATATTTGCATTTTTCAGTaGAGACTGAGAAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHICIFQ*RLRSPL
Trigger: GAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAAT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCCCTCAAAGGTACATTaGTACCGCTTTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTPSKVH*YRFTSL
Trigger: TAAAGAAGTAAAGCGGTACCAATGTACCTTTGAGGG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTTGTTCTTGGTTTTGTaGAGAACTGGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLFLVL*RTGGTI
Trigger: AATGGTGCCACCAGTTCTCCACAAAACCAAGAACAA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATTCGCTATTTAAACTGTaGGTGCTTCAGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHSLFKL*VLQMSF
Trigger: GAAGGACATCTGAAGCACCCACAGTTTAAATAGCGA...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR TCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCCCAGTTGTGAGAAATaGAAACGTAATGACTTGTCT +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRPSCEK*KRNDLS
Trigger: AGACAAGTCATTACGTTTTCATTTCTCACAACTGGG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR GCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGACACACAAAAGAAATTaGAGCAATCGGGTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRTHKRN*SNRVKD
Trigger: ATCTTTAACCCGATTGCTGCAATTTCTTTTGTGTGT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CCA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAGTTCCACAAATCAATaGTTTCAATCACTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRSSTNQ*FQSLWK
Trigger: TTTCCAGAGTGATTGAAACCATTGATTTGTGGAACT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp GGAGCAGGCGGAGGAGCAGACGGAGCTGAGGCAGGTAGTAGAGGCTaGGGTGGCTCGGAGAGGCCAGGTTGCAGTACAAGTGGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: GAGGGADGAEAGSRG*GGSERPGCSTSGRD
Trigger: ATCTCTTCCACTTGTACTGCAACCTGGCCTCTCCGAGCCACCCCAGCCTCTACTACCTGCCTCAGCTCCGTCTGCTCCTCCGCCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp GGGTGGGGAGGAGCAGCCCTTTCTCCTGCTGGATGCCCGCTCCTTTaGAGAGTCCCGGCATGCACACTGACACTGACATGCCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GWGGAALSPAGCPLL*RVPACTLTLTCLFL
Trigger: CAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCCAGCAGGAGAAAGGGCTGCTCCTCCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp CCTCATGCCTCCTGCTCACCCGCTTTTCCCAGAGGTGAGCACACATaGGCCCTTCACTTGGAGAAGCTGCTGGTGAGGCCCATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PHASCSPAFPRGEHT*ALHLEKLLVRPISS
Trigger: GGAGGAGATGGGCCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCTGGGAAAAGCGGGTGAGCAGGAGGCATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGTGGATGCCCGCTCCTTaGCAGAGTCCCGGCATGCAC +
Preference number: 5 (lower is better)
Translates to: ALSSPRSSALETRLMEGQWMPAP*QSPGMH
Trigger: GTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCCA...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 90 bp CCAGAGGTGAGCACACATGGGCCCTTCACTTGGAGAAGCTGCTGGTaGGGCCCATCTCCTCCTCCCCCTGCAGTAGTGCTTCAATGGGAA +
Preference number: 5 (lower is better)
Translates to: PEVSTHGPFTWRSCW*GPSPPPPAVVLQWE
Trigger: TTCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGGGGCTCAGTAGTACTTaGTGGTGGGGCTGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ALSSPRSSALETRLMEGQGLSST*WWGWCC
Trigger: GCAGCACCAGCCCCACCACAAAGTACTACTGAGCCC...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGGGCTCTTGGGGGCTCTaGCCTTTCCTGGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGGSWGL*PFLARR
Trigger: TCTTCTAGCCAGGAAAGGCAAGAGCCCCCAAGAGCC...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp GGTGTACTCTCCTCGGTGAGTCTTCTGGTGGGTTCGCAGGTTGCCTaGTGTGCTGTAGGTGCGGGGACAGCCCTCAAAGGTACATTGGTA +
Preference number: 5 (lower is better)
Translates to: GVLSSVSLLVGSQVA*CAVGAGTALKGTLV
Trigger: TACCAATGTACCTTTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGAACCCACCAGAAGACTCACCGAGGAGAGTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp CTTCACTTGGAGAAGCTGCTGGTGAGGCCCATCTCCTCCTCCCCCTaGAGTAGTGCTTCAATGGGAATCAGATTGGACGGGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LHLEKLLVRPISSSP*SSASMGIRLDGVSR
Trigger: CCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTCCAAGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCTCGGAGAGGCCAGGTaGCAGTACAAGTGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLGEAR*QYKWKR
Trigger: TCTCTTCCACTTGTACTGCAACCTGGCCTCTCCGAG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTAGTTAGGACAGAGTaGGCACCCAGGGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLVRTE*APRGRV
Trigger: GACTCTGCCCCTGGGTGCCAACTCTGTCCTAACTAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCGTCACCCCCGATCTTaGAGAGTGAAAAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGRHPRS*RVKRPL
Trigger: CAGTGGCCTTTTCACTCTCAAAGATCGGGGGTGACG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGGGCCCCTCCTGGGCTTaGTACCATGATCTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGGPSWA*YHDLLL
Trigger: TAGAAGGAGATCATGGTACAAAGCCCAGGAGGGGCC...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp CAAAGGTGTACTCTCCTCGGTGAGTCTTCTGGTGGGTTCGCAGGTTaGCTGCTGTGCTGTAGGTGCGGGGACAGCCCTCAAAGGTACATT +
Preference number: 5 (lower is better)
Translates to: QRCTLLGESSGGFAG*LLCCRCGDSPQRYI
Trigger: AATGTACCTTTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGAACCCACCAGAAGACTCACCGAGGAGAGTACACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCTCTGCTTGTCGGCTTaGCTCACAGGAGGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCLCLSA*LTGGGQ
Trigger: TTGCCCTCCTCCTGTGAGCAAAGCCGACAAGCAGAG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGCTGAGGCAGAATTGCTaGAACCTGGGAAGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLRQNC*NLGSGG
Trigger: ACCTCCACTTCCCAGGTTCAAGCAATTCTGCCTCAG...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTTGCTAGAGCCTGCTTaGCACACACGTCATCAACAG +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGLLEPA*HTRHQQ
Trigger: CTGTTGATGACGTGTGTGCAAAGCAGGCTCTAGCAA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp GCCCTTTCTCCTGCTGGATGCCCGCTCCTTTGCAGAGTCCCGGCATaGACACTGACACTGACATGCCTCTTCTTGTTTGATGATGATCAC +
Preference number: 5 (lower is better)
Translates to: ALSPAGCPLLCRVPA*TLTLTCLFLFDDDH
Trigger: GTGATCATCATCAAACAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCCAGCAGGAGAAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp CCATCTCCTCCTCCCCCTGCAGTAGTGCTTCAATGGGAATCAGATTaGACGGGGTGTCCAGGCTCTGGAGGGATAGAAACTCTGACACAT +
Preference number: 5 (lower is better)
Translates to: PSPPPPAVVLQWESD*TGCPGSGGIETLTH
Trigger: ATGTGTCAGAGTTTCTATCCCTCCAGAGCCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCACTCATGCTCAGCAGTaGGTTTTCCAGGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCTHAQQ*VFQEDW
Trigger: CCAGTCCTCCTGGAAAACCAACTGCTGAGCATGAGT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGAGTGTGGTGAAGTATTaGCTGCAGCCTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGSVVKY*LQPSDS
Trigger: TGAATCTGAAGGCTGCAGCAAATACTTCACCACACT...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGGTATCCTCTGATCCATaGTGTTGTGGAAGTGCATTG +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGVSSDP*CCGSAL
Trigger: CAATGCACTTCCACAACACAATGGATCAGAGGATAC...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCAGGACAGTGATCATGTaGCTAGAGCCTGCTTTGCAC +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCRTVIM*LEPALH
Trigger: GTGCAAAGCAGGCTCTAGCAACATGATCACTGTCCT...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGCTCAGTGGAAGTCCGTaGTTCCCATGTTTCACACTT +
Preference number: 5 (lower is better)
Translates to: ALSSPRSSALETRLMEGQLSGSP*FPCFTL
Trigger: AAGTGTGAAACATGGGAACAACGGACTTCCACTGAG...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp TGCCCGCTCCTTTGCAGAGTCCCGGCATGCACACTGACACTGACATaGCTCTTCTTGTTTGATGATGATCACAGGAACACTGAGGCCAAT +
Preference number: 5 (lower is better)
Translates to: CPLLCRVPACTLTLT*LFLFDDDHRNTEAN
Trigger: ATTGGCCTCAGTGTTCCTGTGATCATCATCAAACAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAGGAGCGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCACCTTCAATATTTCTaGGCATGGGTGTGGAACCAG +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCHLQYF*AWVWNQ
Trigger: CTGGTTCCACACCCATGCCAAGAAATATTGAAGGTG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCCAAGGAAGCTGTCTGTaGAGGATCTTCCTGAATTGC +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCQGSCL*RIFLNC
Trigger: GCAATTCAGGAAGATCCTCAACAGACAGCTTCCTTG...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCACATGGGCCCTTCACTaGGAGAAGCTGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSTWALH*EKLLVR
Trigger: CCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGAAGAGCAGCCTTGTTaGTGGAACACCACTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPEEQPC*WNTTPC
Trigger: GCAAGGAGTGGTGTTCCACAAACAAGGCTGCTCTTC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp AACTCACAGCTGCCTCACTGGCCTTTGCCACTGCCCTCTCTGATGGAGCAAGGGTATGCTTCAGTTTTGTaGCCTCCACCCCCAAATATT +
Preference number: 5 (lower is better)
Translates to: NSQLPHWPLPLPSLMEQGYASVL*PPPPNI
Trigger: AATATTTGGGGGTGGAGGCAACAAAACTGAAGCATA...CCCTTGCTCCATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAGCTGTGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp GGTCAGCTCATCTTCCTCTGCCTCAAAGTAGATGATGTTGTTGTCTaGACTGTGTTCCCCCATGGTTCAGTTGTGCTCAGCCCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GQLIFLCLKVDDVVV*TVFPHGSVVLSPVV
Trigger: CACAACTGGGCTGAGCACAACTGAACCATGGGGGAACACAGTCCAGACAACAACATCATCTACTTTGAGGCAGAGGAAGATGAGCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373036.5
ENST00000468190.1
CDS-3UTR CAA 90 bp AACACCATCTCACCTGAACCCTGTCCAACTCACAGCTGCCTCACTGGCCTTTGCGTGCGGAAGAAACTCTaGATGATTAGCAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: NTISPEPCPTHSCLTGLCVRKKL*MISSKL
Trigger: CAGTTTGCTGCTAATCATCAAGAGTTTCTTCCGCAC...GCAAAGGCCAGTGAGGCAGCTGTGAGTTGGACAGGGTTCAGGTGAGATGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGAAGTCACATCCTTGTTaGCACTGTATGAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: ALSSPRSSALETRLMEGQKSHPC*HCMRLY
Trigger: ATACAGCCTCATACAGTGCAAACAAGGATGTGACTT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCGAGGCTGAGGCAGAATaGCTTGAACCTGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSEAEAE*LEPGKW
Trigger: CCACTTCCCAGGTTCAAGCAATTCTGCCTCAGCCTC...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTGCAGGATAGCTGTGTaGGGAGTTGGGGTGATGGTT +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSCRIAV*GVGVMV
Trigger: AACCATCACCCCAACTCCCAACACAGCTATCCTGCA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGCTGCCTCACTGGCCTTaGCCACTGCCCTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRLPHWP*PLPSLM
Trigger: CATCAGAGAGGGCAGTGGCAAAGGCCAGTGAGGCAG...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTGTTCTCAATAATATCTaGGCTGGCCCTGAGCAATGG +
Preference number: 5 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPVLNNI*AGPEQW
Trigger: CCATTGCTCAGGGCCAGCCAAGATATTATTGAGAAC...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGCACACAGGGAAGGCTaGCATAGATTGAGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREAHREG*HRLSGC
Trigger: GCAACCGCTCAATCTATGCAAGCCTTCCCTGTGTGC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CTGCCTGACACTGTTGGCTTAGAAGAGCAGCCTTGTTTGTGGAACACCACTCCTATTATCACCCAATTTTaGGCCCAACAGGCACACCAC +
Preference number: 5 (lower is better)
Translates to: LPDTVGLEEQPCLWNTTPIITQF*AQQAHH
Trigger: GTGGTGTGCCTGTTGGGCCAAAAATTGGGTGATAAT...AGGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAGCCAACAGTGTCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAGCCTGTACAGTGTGTaGAATGCCTTCTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIRESLYSV*NAFSQP
Trigger: GGGCTGTGAGAAGGCATTCAACACACTGTACAGGCT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GCCCTCTCTTCTCCAAGGTCCTCGGCACTAGAGACCAGGCTTATGGAAGGACAGACTTTTGAGACTGTATaGAGTGCTGAATGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ALSSPRSSALETRLMEGQTFETV*SAECFL
Trigger: GAGAAAACATTCAGCACTCAATACAGTCTCAAAAGT...CTGTCCTTCCATAAGCCTGGTCTCTAGTGCCGAGGACCTTGGAGAAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp TTCACCAGTATGTGTACGAACGTGAGTTTTAAGGTGGTGGCTTGCTaGAAATGCTTTTCCACAGCCATCGTGATCGCACCGAAATGGCTT +
Preference number: 5 (lower is better)
Translates to: FTSMCTNVSFKVVAC*KCFSTAIVIAPKWL
Trigger: AAGCCATTTCGGTGCGATCACGATGGCTGTGGAAAAGCATTTGCAGCAAGCCACCACCTTAAAACTCACGTTCGTACACATACTGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCTGAGCTCGGTGAGTTaGGTCAGCACTCATGACTAT +
Preference number: 5 (lower is better)
Translates to: HSALYKVSQENPPTLQYPLSSVS*VSTHDY
Trigger: ATAGTCATGAGTGCTGACCAAACTCACCGAGCTCAG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGGTGCTAAGCACCCTTaGAAGCGGTTGTCTAATTGG +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREGAKHP*KRLSNW
Trigger: CCAATTAGACAACCGCTTCAAAGGGTGCTTAGCACC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAGGCTGGAGGCCTTTTaGCTTAAGGAACCAACACAG +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIRERLEAF*LKEPTQ
Trigger: CTGTGTTGGTTCCTTAAGCAAAAAGGCCTCCAGCCT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAACTGAGAAGCCCTCTCTaGAACAGGAGTAACAGTGAG +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIRELRSPL*NRSNSE
Trigger: CTCACTGTTACTCCTGTTCAAGAGAGGGCTTCTCAG...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGAGAAAGCCTCTGACTaGGCACACTACGAGGATAAC +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREEKASD*AHYEDN
Trigger: GTTATCCTCGTAGTGTGCCAAGTCAGAGGCTTTCTC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 90 bp GCTTTACTTCTTTACGTTTTGTTTCCGGACATTCCGACTGCAGAGTaGGGGTTGCACCTTCAATATTTCTTGGCATGGGTGTGGAACCAG +
Preference number: 5 (lower is better)
Translates to: ALLLYVLFPDIPTAE*GLHLQYFLAWVWNQ
Trigger: CTGGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGAAACAAAACGTAAAGAAGTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp TGGTACCGCTTTACTTCTTTACGTTTTGTTTCCGGACATTCCGACTaGAGAGTGAGGGTTGCACCTTCAATATTTCTTGGCATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: WYRFTSLRFVSGHSD*RVRVAPSIFLGMGV
Trigger: CACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGAAACAAAACGTAAAGAAGTAAAGCGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp CGGACATTCCGACTGCAGAGTGAGGGTTGCACCTTCAATATTTCTTaGCATGGGTGTGGAACCAGGGTTTATTGTCAAATGAATCTGATC +
Preference number: 5 (lower is better)
Translates to: RTFRLQSEGCTFNIS*HGCGTRVYCQMNLI
Trigger: GATCAGATTCATTTGACAATAAACCCTGGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCCTGACATGCCTCTTCTaGTTTGATGATGATCACAGG +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLTCLF*FDDDHR
Trigger: CCTGTGATCATCATCAAACAAGAAGAGGCATGTCAG...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGAGCAAGTCACATCCTaGTTTGCACTGTATGAGGCT +
Preference number: 5 (lower is better)
Translates to: HSALYKVSQENPPTLQYPEQVTS*FALYEA
Trigger: AGCCTCATACAGTGCAAACAAGGATGTGACTTGCTC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTAAGAGGCAATGACTaGGAGCCAAAGGCAGACATA +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLRGND*EPKADI
Trigger: TATGTCTGCCTTTGGCTCCAAGTCATTGCCTCTTAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCAAGAAGAGAAGCCCCTaGCCTTTTACTCAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSKKRSP*PFTQRD
Trigger: ATCTCTCTGAGTAAAAGGCAAGGGGCTTCTCTTCTT...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGAAGGATGTAGACTGTaGAGTCAAATAGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREEGCRL*SQIALG
Trigger: CCCAAGGGCTATTTGACTCAACAGTCTACATCCTTC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 90 bp TTCTTTACGTTTTGTTTCCGGACATTCCGACTGCAGAGTGAGGGTTaGACCTTCAATATTTCTTGGCATGGGTGTGGAACCAGGGTTTAT +
Preference number: 5 (lower is better)
Translates to: FFTFCFRTFRLQSEG*TFNISWHGCGTRVY
Trigger: ATAAACCCTGGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGAAACAAAACGTAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 90 bp CCTGGCCCTGGGTCGTACTGGAATTTTCTCGCAATTCAGAATCTGTaGACAGAAGGCTCAAGTCACTTAGACAAAGTGAGTGATTTGTAT +
Preference number: 5 (lower is better)
Translates to: PGPGSYWNFLAIQNL*TEGSSHLDKVSDLY
Trigger: ATACAAATCACTCACTTTGTCTAAGTGACTTGAGCCTTCTGTCCACAGATTCTGAATTGCGAGAAAATTCCAGTACGACCCAGGGCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCCATAACCCTGGGACATaGCTTCATGATCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: HSALYKVSQENPPTLQYPHNPGT*LHDLSG
Trigger: ACCTGATAGATCATGAAGCAATGTCCCAGGGTTATG...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATCTTAGAAGAGCAGCCTaGTTTGTGGAACACCACTCC +
Preference number: 5 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHLRRAA*FVEHHS
Trigger: GGAGTGGTGTTCCACAAACAAGGCTGCTCTTCTAAG...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CATTCAGCATTATACAAAGTCTCTCAGGAAAACCCACCCACCCTCCAATATCCCGTTCATTTCCCAAGTTaGGGAAACCACACTCACCAT +
Preference number: 5 (lower is better)
Translates to: HSALYKVSQENPPTLQYPVHFPS*GNHTHH
Trigger: ATGGTGAGTGTGGTTTCCCAAACTTGGGAAATGAAC...GGGATATTGGAGGGTGGGTGGGTTTTCCTGAGAGACTTTGTATAATGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAACATCAGTCCACAGCCTaGACCCTGAAAATAAAACTC +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREHQSTA*TLKIKL
Trigger: GAGTTTTATTTTCAGGGTCAAGGCTGTGGACTGATG...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 90 bp CATGGGTGTGGAACCAGGGTTTATTGTCAAATGAATCTGATCTGGTaGGATAATGTGCTGCACATAACCCTGGGACATTGCTTCATGATC +
Preference number: 5 (lower is better)
Translates to: HGCGTRVYCQMNLIW*DNVLHITLGHCFMI
Trigger: GATCATGAAGCAATGTCCCAGGGTTATGTGCAGCACATTATCTCACCAGATCAGATTCATTTGACAATAAACCCTGGTTCCACACCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp ATTTCCCAAGTTTGGGAAACCACACTCACCATGAAGGTTCTTTCTGGCTCCAGCTTACTTCTTTACGTTTaGTTTCCGGACATTCCGACT +
Preference number: 5 (lower is better)
Translates to: ISQVWETTLTMKVLSGSSLLLYV*FPDIPT
Trigger: AGTCGGAATGTCCGGAAACAAAACGTAAAGAAGTAA...GCTGGAGCCAGAAAGAACCTTCATGGTGAGTGTGGTTTCCCAAACTTGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAGAGGATCTTCCTGAATaGCCGTATCATCTGAATTCT +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREEDLPE*PYHLNS
Trigger: AGAATTCAGATGATACGGCAATTCAGGAAGATCCTC...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp CAATGGCTCAGAGAACAGGAGAGTGACCAATGCAGATCCCTTTACATTAGGGAAAAATATGCTTCAGTTTaGTTGCCTCCACCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: QWLREQESDQCRSLYIREKYASV*LPPPPN
Trigger: ATTTGGGGGTGGAGGCAACAAAACTGAAGCATATTT...TTCCCTAATGTAAAGGGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 90 bp GTCCTGCTCAATAAGAACAGTGGTCCTATCATAAACAGTTCCAGATaGGGAAGGCACCAGTCCGTTTTTATCCACAAACCTGAGCATTTT +
Preference number: 5 (lower is better)
Translates to: VLLNKNSGPIINSSR*GRHQSVFIHKPEHF
Trigger: AAAATGCTCAGGTTTGTGGATAAAAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACCACTGTTCTTATTGAGCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373036.5
ENST00000468190.1
CDS-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATGCCCTCAAAGGTACATaGGTACCGCTTTACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHALKGT*VPLYFF
Trigger: AAAGAAGTAAAGCGGTACCAATGTACCTTTGAGGGC...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAATTTGTTCTTGGTTTaGTGGAGAACTGGTGGCACC +
Preference number: 5 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRNLFLV*WRTGGT
Trigger: GGTGCCACCAGTTCTCCACAAAACCAAGAACAAATT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTTTGCTGAATTTGTTCTaGGTTTTGTGGAGAACTGGT +
Preference number: 5 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLLNLF*VLWRTG
Trigger: ACCAGTTCTCCACAAAACCAAGAACAAATTCAGCAA...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGTGTTGTGGAAGTGCATaGTATGAGTGTCCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRCCGSA*YECPLL
Trigger: TAACAAAGGACACTCATACAATGCACTTCCACAACA...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGGACAAAGTGAGTGATTaGTATCCTCTGATCCATTGT +
Preference number: 5 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRDKVSD*YPLIHC
Trigger: ACAATGGATCAGAGGATACAAATCACTCACTTTGTC...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCCAGTTTAATTTGCATTTTTCAGTGCAGACTGAGAAGCCCTCTCTTGAACAGGAGATGCTTGCTGAATTaGTTCTTGGTTTTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: SSLICIFQCRLRSPLLNRRCLLN*FLVLWR
Trigger: TCTCCACAAAACCAAGAACAAATTCAGCAAGCATCT...CCTGTTCAAGAGAGGGCTTCTCAGTCTGCACTGAAAAATGCAAATTAAACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp GAGGGAAAGAAAGACTGCCTATCCTGGGAAATAAACCTGATCTTCACAACCACTCTCAACTTTAGATGCTaGCTGAATTTGTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: EGKKDCLSWEINLIFTTTLNFRC*LNLFLV
Trigger: AACCAAGAACAAATTCAGCAAGCATCTAAAGTTGAG...AGTGGTTGTGAAGATCAGGTTTATTTCCCAGGATAGGCAGTCTTTCTTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS-3UTR CAA 90 bp TCACATCGCTCAGTGGAAGTCCGTTGTTCCCATGTTTCACACTTACTTTTACATATCAAGCTACACATATaGCACCAAGGTAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SHRSVEVRCSHVSHLLLHIKLHI*HQGKCF
Trigger: AAAGCACTTACCTTGGTGCAATATGTGTAGCTTGAT...ATGTAAAAGTAAGTGTGAAACATGGGAACAACGGACTTCCACTGAGCGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 90 bp TGCTCACCCGCTTTTCCCAGAGGTGAGCACACATGGGCCCTTCACTaGGAGAAGCTGCTGGTGAGGCCCATCTCCTCCTCCCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: CSPAFPRGEHTWALH*EKLLVRPISSSPCS
Trigger: ACTGCAGGGGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCTGGGAAAAGCGGGTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp TCCTCGGTGAGTCTTCTGGTGGGTTCGCAGGTTGCCTaGTGTGCTGTAGGTGCGGGGACAGCCCTCAAAGGT +
Preference number: 6 (lower is better)
Translates to: SSVSLLVGSQVA*CAVGAGTALKG
Trigger: ACCTTTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGAACCCACCAGAAGACTCACCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp ACTCTCCTCGGTGAGTCTTCTGGTGGGTTCGCAGGTTaGCTGCTGTGCTGTAGGTGCGGGGACAGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: TLLGESSGGFAG*LLCCRCGDSPQ
Trigger: TTGAGGGCTGTCCCCGCACCTACAGCACAGCAGGCAACCTGCGAACCCACCAGAAGACTCACCGAGGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp TCCTGCTCACCCGCTTTTCCCAGAGGTGAGCACACATaGGCCCTTCACTTGGAGAAGCTGCTGGTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SCSPAFPRGEHT*ALHLEKLLVRP
Trigger: GGGCCTCACCAGCAGCTTCTCCAAGTGAAGGGCCCATGTGTGCTCACCTCTGGGAAAAGCGGGTGAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp GAGAAGCTGCTGGTGAGGCCCATCTCCTCCTCCCCCTaGAGTAGTGCTTCAATGGGAATCAGATTGGACGGG +
Preference number: 6 (lower is better)
Translates to: EKLLVRPISSSP*SSASMGIRLDG
Trigger: CCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGATGGGCCTCACCAGCAGCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp CAGAAGCCCCAGCAACAACAGAAAGTCCTGGTACAATaGGCTGCGGTGCCTGGGGGTGCGGAAGAAACTCTT +
Preference number: 6 (lower is better)
Translates to: QKPQQQQKVLVQ*AAVPGGAEETL
Trigger: AAGAGTTTCTTCCGCACCCCCAGGCACCGCAGCCCATTGTACCAGGACTTTCTGTTGTTGCTGGGGCTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 90 bp CCCATCTCCTCCTCCCCCTGCAGTAGTGCTTCAATGGGAATCAGATaGGACGGGGTGTCCAGGCTCTGGAGGGATAGAAACTCTGACACA +
Preference number: 6 (lower is better)
Translates to: PISSSPCSSASMGIR*DGVSRLWRDRNSDT
Trigger: TGTGTCAGAGTTTCTATCCCTCCAGAGCCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGGAGGAGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp CCTGCTGGATGCCCGCTCCTTTGCAGAGTCCCGGCATaGACACTGACACTGACATGCCTCTTCTTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: PAGCPLLCRVPA*TLTLTCLFLFD
Trigger: ATCAAACAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAGGAGCGGGCATCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp GAATGCCTTCTCACAGCCCTGCACGTCACACTCAAATaGCTTCTCCTTCGTGTGCACTCGCACGTGGATCCT +
Preference number: 6 (lower is better)
Translates to: ECLLTALHVTLK*LLLRVHSHVDP
Trigger: AGGATCCACGTGCGAGTGCACACGAAGGAGAAGCCATTTGAGTGTGACGTGCAGGGCTGTGAGAAGGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp CCTCCCCCTGCAGTAGTGCTTCAATGGGAATCAGATTaGACGGGGTGTCCAGGCTCTGGAGGGATAGAAACT +
Preference number: 6 (lower is better)
Translates to: PPPAVVLQWESD*TGCPGSGGIET
Trigger: AGTTTCTATCCCTCCAGAGCCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 72 bp AATGGGCTGCGGTGCCTGGGGGTGCGGAAGAAACTCTaGATGATTAGCAGCAAACTGTGTGCTGTGGGGAAC +
Preference number: 6 (lower is better)
Translates to: NGLRCLGVRKKL*MISSKLCAVGN
Trigger: GTTCCCCACAGCACACAGTTTGCTGCTAATCATCAAGAGTTTCTTCCGCACCCCCAGGCACCGCAGCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 72 bp TCCTCCCCCTGCAGTAGTGCTTCAATGGGAATCAGATaGGACGGGGTGTCCAGGCTCTGGAGGGATAGAAAC +
Preference number: 6 (lower is better)
Translates to: SSPCSSASMGIR*DGVSRLWRDRN
Trigger: GTTTCTATCCCTCCAGAGCCTGGACACCCCGTCCAATCTGATTCCCATTGAAGCACTACTGCAGGGGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 72 bp CCATGGTTCAGTTGTGCTCAGCCCAGTTGTGAGAAATaGAAACGTAATGACTTGTCTCCGCGGCTCCCGGCA +
Preference number: 6 (lower is better)
Translates to: PWFSCAQPSCEK*KRNDLSPRLPA
Trigger: TGCCGGGAGCCGCGGAGACAAGTCATTACGTTTTCATTTCTCACAACTGGGCTGAGCACAACTGAACCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp TGTTTGATGATGATCACAGGAACACTGAGGCCAATCTaGTGGACAGAGCTCCCTGGGCTACTGGCTACTGGT +
Preference number: 6 (lower is better)
Translates to: CLMMITGTLRPI*WTELPGLLATG
Trigger: ACCAGTAGCCAGTAGCCCAGGGAGCTCTGTCCAGCAGATTGGCCTCAGTGTTCCTGTGATCATCATCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp TTGATGATGATCACAGGAACACTGAGGCCAATCTGCTaGACAGAGCTCCCTGGGCTACTGGCTACTGGTACT +
Preference number: 6 (lower is better)
Translates to: LMMITGTLRPIC*TELPGLLATGT
Trigger: AGTACCAGTAGCCAGTAGCCCAGGGAGCTCTGTCCAGCAGATTGGCCTCAGTGTTCCTGTGATCATCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 90 bp CTTTGCAGAGTCCCGGCATGCACACTGACACTGACATGCCTCTTCTaGTTTGATGATGATCACAGGAACACTGAGGCCAATCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: LCRVPACTLTLTCLF*FDDDHRNTEANLLD
Trigger: GTCCAGCAGATTGGCCTCAGTGTTCCTGTGATCATCATCAAACAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp ACGAACGTGAGTTTTAAGGTGGTGGCTTGCTGCAAATaGTTTTCCACAGCCATCGTGATCGCACCGAAATGG +
Preference number: 6 (lower is better)
Translates to: TNVSFKVVACCK*FSTAIVIAPKW
Trigger: CCATTTCGGTGCGATCACGATGGCTGTGGAAAAGCATTTGCAGCAAGCCACCACCTTAAAACTCACGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp ATGTGTACGAACGTGAGTTTTAAGGTGGTGGCTTGCTaGAAATGCTTTTCCACAGCCATCGTGATCGCACCG +
Preference number: 6 (lower is better)
Translates to: MCTNVSFKVVAC*KCFSTAIVIAP
Trigger: CGGTGCGATCACGATGGCTGTGGAAAAGCATTTGCAGCAAGCCACCACCTTAAAACTCACGTTCGTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp TTTTGTTTCCGGACATTCCGACTGCAGAGTGAGGGTTaGACCTTCAATATTTCTTGGCATGGGTGTGGAACC +
Preference number: 6 (lower is better)
Translates to: FCFRTFRLQSEG*TFNISWHGCGT
Trigger: GGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGAAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp CTTTGCAGAGTCCCGGCATGCACACTGACACTGACATaGCTCTTCTTGTTTGATGATGATCACAGGAACACT +
Preference number: 6 (lower is better)
Translates to: LCRVPACTLTLT*LFLFDDDHRNT
Trigger: AGTGTTCCTGTGATCATCATCAAACAAGAAGAGGCATGTCAGTGTCAGTGTGCATGCCGGGACTCTGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp CGACTGCAGAGTGAGGGTTGCACCTTCAATATTTCTTaGCATGGGTGTGGAACCAGGGTTTATTGTCAAATG +
Preference number: 6 (lower is better)
Translates to: RLQSEGCTFNIS*HGCGTRVYCQM
Trigger: CATTTGACAATAAACCCTGGTTCCACACCCATGCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 72 bp GGAACCAGGGTTTATTGTCAAATGAATCTGATCTGGTaGGATAATGTGCTGCACATAACCCTGGGACATTGC +
Preference number: 6 (lower is better)
Translates to: GTRVYCQMNLIW*DNVLHITLGHC
Trigger: GCAATGTCCCAGGGTTATGTGCAGCACATTATCTCACCAGATCAGATTCATTTGACAATAAACCCTGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CCA 72 bp GGGTCGTACTGGAATTTTCTCGCAATTCAGAATCTGTaGACAGAAGGCTCAAGTCACTTAGACAAAGTGAGT +
Preference number: 6 (lower is better)
Translates to: GSYWNFLAIQNL*TEGSSHLDKVS
Trigger: ACTCACTTTGTCTAAGTGACTTGAGCCTTCTGTCCACAGATTCTGAATTGCGAGAAAATTCCAGTACGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS GCA 72 bp TTTACTTCTTTACGTTTTGTTTCCGGACATTCCGACTaGAGAGTGAGGGTTGCACCTTCAATATTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: FTSLRFVSGHSD*RVRVAPSIFLG
Trigger: GCCAAGAAATATTGAAGGTGCAACCCTCACTCTGCAGTCGGAATGTCCGGAAACAAAACGTAAAGAAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS CAA 72 bp ATGTGCTTCCTCAGATCACTGAGTGTGGTGAAGTATTaGCTGCAGCCTTCAGATTCACAGTTAAACGTTTTC +
Preference number: 6 (lower is better)
Translates to: MCFLRSLSVVKY*LQPSDSQLNVF
Trigger: GAAAACGTTTAACTGTGAATCTGAAGGCTGCAGCAAATACTTCACCACACTCAGTGATCTGAGGAAGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373036.5
CDS TCA 72 bp AATAAGAACAGTGGTCCTATCATAAACAGTTCCAGATaGGGAAGGCACCAGTCCGTTTTTATCCACAAACCT +
Preference number: 6 (lower is better)
Translates to: NKNSGPIINSSR*GRHQSVFIHKP
Trigger: AGGTTTGTGGATAAAAACGGACTGGTGCCTTCCTCATCTGGAACTGTTTATGATAGGACCACTGTTCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373036.5
ENST00000468190.1
CDS TCA 72 bp CCATGGTTCAGTTGTGCTCAGCCCAGTTGTGAGAAATaGAAACGTAATGACTTGTCTAGAACAGATGTTTCA +
Preference number: 6 (lower is better)
Translates to: PWFSCAQPSCEK*KRNDLSRTDVS
Trigger: TGAAACATCTGTTCTAGACAAGTCATTACGTTTTCATTTCTCACAACTGGGCTGAGCACAACTGAACCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468190.1