RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTERF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000122085

Ensembl transcript IDs: ENST00000241527.10, ENST00000391980.7, ENST00000401626.6, ENST00000406593.1, ENST00000407095.3, ENST00000414146.5, ENST00000424798.5, ENST00000434791.1, ENST00000439144.5, ENST00000449133.1, ENST00000455202.6, ENST00000460915.1, ENST00000464344.6, ENST00000475860.1, ENST00000479205.5, ENST00000488567.5, ENST00000493169.1, ENST00000495694.5, ENST00000496878.5, ENST00000614476.4

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTaGTATGGGATGCTGCAGGCCTGTGGGCTGAGCCAGGCGGTCTAC +
Preference number: 1 (lower is better)
Translates to: PCPACSPQGDGARAG*YGMLQACGLSQAVY
Trigger: GTAGACCGCCTGGCTCAGCCCACAGGCCTGCAGCATCCCATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp CCAAGTGTCCGGGCAAGGCCGCAGCCTGCAGCTCACCAGCCGTGCTaGTCGGCCTGTGCACGTCACCGGCTCTTCCCTAGGGTAGCTTTT +
Preference number: 1 (lower is better)
Translates to: PSVRARPQPAAHQPC*SACARHRLFPRVAF
Trigger: AAAAGCTACCCTAGGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCGGACACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp TTACCAAGTGTCCGGGCAAGGCCGCAGCCTGCAGCTCACCAGCCGTaGTGCTCGGCCTGTGCACGTCACCGGCTCTTCCCTAGGGTAGCT +
Preference number: 1 (lower is better)
Translates to: LPSVRARPQPAAHQP*CSACARHRLFPRVA
Trigger: AGCTACCCTAGGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCGGACACTTGGTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp ACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGCAGCCTaGAGCTCACCAGCCGTGCTGCTCGGCCTGTGCACGTCACCGGCT +
Preference number: 1 (lower is better)
Translates to: TYLFGITKCPGKAAA*SSPAVLLGLCTSPA
Trigger: AGCCGGTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp GCCGCTGCCTGCTTACTCAGCACTGCTAAAGGAAGCGCGGTCCTGTaGTGCTGTGTTACAGACTCCCGGGCAGGAAGGTTCAGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: AAACLLSTAKGSAVL*CCVTDSRAGRFRSP
Trigger: GGGACTTCTGAACCTTCCTGCCCGGGAGTCTGTAACACAGCAGCACAGGACCGCGCTTCCTTTAGCAGTGCTGAGTAAGCAGGCAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 90 bp AGCTGTGAAAGCACAAGCCTCAAGAAGACCCCAAACAGGTGCCTCTaGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTG +
Preference number: 1 (lower is better)
Translates to: SCESTSLKKTPNRCL*GAGPCRVLHVAHRV
Trigger: CACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAGAGGCACCTGTTTGGGGTCTTCTTGAGGCTTGTGCTTTCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 90 bp CTGTGGGCTGAGCCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTaGGCAGCCACGTTCTGCTACGAAACTGTATGTCCATATATGTGC +
Preference number: 1 (lower is better)
Translates to: LWAEPGGLLAQIGSP*AATFCYETVCPYMC
Trigger: GCACATATATGGACATACAGTTTCGTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGGCTCAGCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp GCTGCCTGCTTACTCAGCACTGCTAAAGGAAGCGCGGTCCTGTGCTaGTGTGTTACAGACTCCCGGGCAGGAAGGTTCAGAAGTCCCCAA +
Preference number: 1 (lower is better)
Translates to: AACLLSTAKGSAVLC*CVTDSRAGRFRSPQ
Trigger: TTGGGGACTTCTGAACCTTCCTGCCCGGGAGTCTGTAACACAGCAGCACAGGACCGCGCTTCCTTTAGCAGTGCTGAGTAAGCAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp TCGGCCTGTGCACGTCACCGGCTCTTCCCTAGGGTAGCTTTTGCTTaGTTTCTCCCACGTCCATCCTCTCTCTCTCTGACTCACAGCCAG +
Preference number: 1 (lower is better)
Translates to: SACARHRLFPRVAFA*FLPRPSSLSLTHSQ
Trigger: CTGGCTGTGAGTCAGAGAGAGAGAGGATGGACGTGGGAGAAAGCAAGCAAAAGCTACCCTAGGGAAGAGCCGGTGACGTGCACAGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp AAAGAGAGCTGTGAAAGCACAAGCCTCAAGAAGACCCCAAACAGGTaGCTCTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCAC +
Preference number: 1 (lower is better)
Translates to: KESCESTSLKKTPNR*LWGAGPCRVLHVAH
Trigger: GTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAGAGGCACCTGTTTGGGGTCTTCTTGAGGCTTGTGCTTTCACAGCTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTaGCTGGGCAGGGCGCTTAGCGTAGCTGGAATGCGCAGGACTGGC +
Preference number: 1 (lower is better)
Translates to: PWVTSHFKTGLCFVT*LGRALSVAGMRRTG
Trigger: GCCAGTCCTGCGCATTCCAGCTACGCTAAGCGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 90 bp ACTACAGACTACAGGGCCGGAGACACCAGGCTTGGAAGTGACCACTaGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: TTDYRAGDTRLGSDH*PRADIKANFPKQEG
Trigger: CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACTTCCAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 90 bp GCCCCTTATAGGAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTA +
Preference number: 1 (lower is better)
Translates to: APYRSPHSSSSWWRR*VRHPWVTSHFKTGL
Trigger: TAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTCCTATAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
3UTR GCA 90 bp GACTCACAGCCAGCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTaGCTCAAGCCAGGCGGGCGCACACAAACTAAAATGCTAATCTCC +
Preference number: 1 (lower is better)
Translates to: DSQPARFLALSFLNY*LKPGGRTQTKMLIS
Trigger: GGAGATTAGCATTTTAGTTTGTGTGCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGCTGGCTGTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 90 bp TTAGAAACCACAGAGTCGAAGCCTGTCATCGTCCTCATAGACCAATaGGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCA +
Preference number: 1 (lower is better)
Translates to: LETTESKPVIVLIDQ*VATRTCLALPSVRA
Trigger: TGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGGTCTATGAGGACGATGACAGGCTTCGACTCTGTGGTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 90 bp GGTCACTCTGGTTATGCATATTCACACAGAACATGGTGCTACAATTaGGAAGCACAGGGTGTTACGGACAGCCCCGAGTATTTAATGGCC +
Preference number: 1 (lower is better)
Translates to: GHSGYAYSHRTWCYN*EAQGVTDSPEYLMA
Trigger: GGCCATTAAATACTCGGGGCTGTCCGTAACACCCTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATATGCATAACCAGAGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 90 bp TGTGACAACAGGTATAAAAGAGTCTACCGAGTTCACCAAGACATCTaGTTCAAAGAGAGCTGTGAAAGCACAAGCCTCAAGAAGACCCCA +
Preference number: 1 (lower is better)
Translates to: CDNRYKRVYRVHQDI*FKESCESTSLKKTP
Trigger: TGGGGTCTTCTTGAGGCTTGTGCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTTATACCTGTTGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 90 bp TCTTTCCACAAAGGGTTCAAGGTAGTTACAAGAATTACTACTGTTTaGCGTTTGCTGAAAGAAGTACGTGAGAATATTATATGCTTTAGA +
Preference number: 1 (lower is better)
Translates to: SFHKGFKVVTRITTV*RLLKEVRENIICFR
Trigger: TCTAAAGCATATAATATTCTCACGTACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCTTGTAACTACCTTGAACCCTTTGTGGAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR GCA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACATCTCAGAGTGCCGCTaGCTGCTTACTCAGCACTGC +
Preference number: 2 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYISECR*LLTQHC
Trigger: GCAGTGCTGAGTAAGCAGGCAGCGGCACTCTGAGAT...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 2 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp GGGCTCCAGGAGAGGGCTGAGAGAGTGCCTCCCAGATCTTGTGAACGGCATTCTGGGGAGATAACTGTATaGGACCATTCCCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GLQERAERVPPRSCERHSGEITV*DHSLAS
Trigger: GGAGGCCAGGGAATGGTCCCATACAGTTATCTCCCC...AGAATGCCGTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCTCCTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCACTGTTTGGCGTTTGCTaGAAGAAGTACGTGAGAATA +
Preference number: 2 (lower is better)
Translates to: LGSRPMPCPACSPQGDGALFGVC*KKYVRI
Trigger: TATTCTCACGTACTTCTTTCAGCAAACGCCAAACAG...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 90 bp GAAGCCTGTCATCGTCCTCATAGACCAATGAGTAGCCACACGTACTaGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGCAGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: EACHRPHRPMSSHTY*FGITKCPGKAAACS
Trigger: GCTGCAGGCTGCGGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGGTCTATGAGGACGATGACAGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR GCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCAGAGGGCTGAGAGAGTaGCTCCCAGATCTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRRGLRE*LPDLVN
Trigger: GTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCT...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCGTTTCCTGTTTGGTTTaGTCTGTCTGCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRVSCLV*SVCLSG
Trigger: ACCTGAGAGGCAGACAGATCAAACCAAACAGGAAAC...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR GCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCGCTCACCAGCCGTGCTaGTCGGCCTGTGCACGTCAC +
Preference number: 2 (lower is better)
Translates to: KRVYRVHQDICFKESCESAHQPC*SACARH
Trigger: GTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGC...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATTATTCACACAGAACATaGTGCTACAATTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: MPCPACSPQGDGARAGCYYSHRT*CYNWEA
Trigger: TGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATA...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR GCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACTCCCTGGCCTCCACCTaGCCCAGCACTCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDSLAST*PSTLQA
Trigger: GGCCTGGAGAGTGCTGGGGCAGGTGGAGGCCAGGGA...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACGTTTCCTGTTTGGTTTaGTCTGTCTGCCTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNVSCLV*SVCLSG
Trigger: ACCTGAGAGGCAGACAGATCAAACCAAACAGGAAAC...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
3UTR-3UTR TCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCTCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTA +
Preference number: 2 (lower is better)
Translates to: KRVYRVHQDICFKESCESSWWRR*VRHPWV
Trigger: TACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGA...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTG +
Preference number: 2 (lower is better)
Translates to: PSQFIFLVAQMSEAP*GNKPLQNRSMFCYV
Trigger: CACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
3UTR-3UTR TCA 90 bp CTCAACATAAGTATCTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 2 (lower is better)
Translates to: LNISILFRMGQGPPHRHVNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...CACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATACTTATGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
3UTR-3UTR TCA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCCAACATGTCACTGCATaGAAGATGAATCTCTGGTTG +
Preference number: 2 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAQHVTA*KMNLWL
Trigger: CAACCAGAGATTCATCTTTCATGCAGTGACATGTTG...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACTATGGGACCATTCCCTaGCCTCCACCTGCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDYGTIP*PPPAPA
Trigger: TGCTGGGGCAGGTGGAGGCCAGGGAATGGTCCCATA...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp CACTGCATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 2 (lower is better)
Translates to: HCMKDESLVGLGQLCSSCNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...GCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCCCACTGGCCAAGAGCTaGCATAAAAGCCAACTTCCC +
Preference number: 2 (lower is better)
Translates to: KRVYRVHQDICFKESCESPLAKS*HKSQLP
Trigger: GGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGG...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATTCCTGTTTCCTGTTTaGTTTGATCTGTCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTFLFPV*FDLSAS
Trigger: AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAA...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
3UTR-3UTR CCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACTCAACTGTGGCGATGTaGACGGAGTCACCGAGCTGC +
Preference number: 2 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDSTVAM*TESPSC
Trigger: GCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGA...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTCCACTGGCCAAGAGCTaGCATAAAAGCCAACTTCCC +
Preference number: 2 (lower is better)
Translates to: GILHNRLQETGIYHRKPSPLAKS*HKSQLP
Trigger: GGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGG...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCCATCTGACTCAACTGTaGCGATGTGGACGGAGTCAC +
Preference number: 2 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFHLTQL*RCGRSH
Trigger: GTGACTCCGTCCACATCGCCACAGTTGAGTCAGATG...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp ACTGGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCACCTGAACCGGAAGAATaGACCCCATCTTCCAACTGT +
Preference number: 2 (lower is better)
Translates to: TGILHNRLQETGIYHRKPPEPEE*TPSSNC
Trigger: ACAGTTGGAAGATGGGGTTCATTCTTCCGGTTCAGG...TGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCTTCCTGTTTCCTGTTTaGTTTGATCTGTCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: KRVYRVHQDICFKESCESFLFPV*FDLSAS
Trigger: AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAA...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR TCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTCAACATGTCACTGCATaGAAGATGAATCTCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GILHNRLQETGIYHRKPSQHVTA*KMNLWL
Trigger: CAACCAGAGATTCATCTTTCATGCAGTGACATGTTG...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 90 bp ACAAACTGCCGAATCTTAAACAACACTGGCATTCTTCACAATCGTTaGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGT +
Preference number: 2 (lower is better)
Translates to: TNCRILNNTGILHNR*QETGIYHRKPSTTC
Trigger: ACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCCAGTGTTGTTTAAGATTCGGCAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR GCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCTTATCAACATGTCACTaGATGAAAGATGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: KRVYRVHQDICFKESCESLSTCH*MKDESL
Trigger: CAGAGATTCATCTTTCATGCAGTGACATGTTGATAA...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 90 bp CACAAAGGGTTCAAGGTAGTTACAAGAATTACTACTGTTTGGCGTTaGCTGAAAGAAGTACGTGAGAATATTATATGCTTTAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: HKGFKVVTRITTVWR*LKEVRENIICFRNH
Trigger: GTGGTTTCTAAAGCATATAATATTCTCACGTACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCTTGTAACTACCTTGAACCCTTTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp CGGGCAAGGCCGCAGCCTGCAGCTCACCAGCCGTGCTaGTCGGCCTGTGCACGTCACCGGCTCTTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: RARPQPAAHQPC*SACARHRLFPR
Trigger: CCTAGGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp GTCCGGGCAAGGCCGCAGCCTGCAGCTCACCAGCCGTaGTGCTCGGCCTGTGCACGTCACCGGCTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: VRARPQPAAHQP*CSACARHRLFP
Trigger: AGGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp GCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTaGTATGGGATGCTGCAGGCCTGTGGGCTGAGCCAG +
Preference number: 3 (lower is better)
Translates to: ACSPQGDGARAG*YGMLQACGLSQ
Trigger: CTGGCTCAGCCCACAGGCCTGCAGCATCCCATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp TTTGGCATTACCAAGTGTCCGGGCAAGGCCGCAGCCTaGAGCTCACCAGCCGTGCTGCTCGGCCTGTGCACG +
Preference number: 3 (lower is better)
Translates to: FGITKCPGKAAA*SSPAVLLGLCT
Trigger: CGTGCACAGGCCGAGCAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCCCGGACACTTGGTAATGCCAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp TCCACCTGCCCCAGCACTCTCCAGGCCAGCACAGTCTaGCACTACAGACTACAGGGCCGGAGACACCAGGCT +
Preference number: 3 (lower is better)
Translates to: STCPSTLQASTV*HYRLQGRRHQA
Trigger: AGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGGAGAGTGCTGGGGCAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp GAGCCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTaGGCAGCCACGTTCTGCTACGAAACTGTATGTCCA +
Preference number: 3 (lower is better)
Translates to: EPGGLLAQIGSP*AATFCYETVCP
Trigger: TGGACATACAGTTTCGTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp AGCACAAGCCTCAAGAAGACCCCAAACAGGTGCCTCTaGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCC +
Preference number: 3 (lower is better)
Translates to: STSLKKTPNRCL*GAGPCRVLHVA
Trigger: GGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAGAGGCACCTGTTTGGGGTCTTCTTGAGGCTTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACGCCAGGTTTCTAGCCTaGTCATTCCTAAACTACTGC +
Preference number: 3 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYARFLA*SFLNYC
Trigger: GCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATAAACAGGTCTATGTTTaGTTACGTGCCTGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: MPCPACSPQGDGARAGCYKQVYV*LRAWAG
Trigger: CCCTGCCCAGGCACGTAACAAAACATAGACCTGTTT...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp TGCTTACTCAGCACTGCTAAAGGAAGCGCGGTCCTGTaGTGCTGTGTTACAGACTCCCGGGCAGGAAGGTTC +
Preference number: 3 (lower is better)
Translates to: CLLSTAKGSAVL*CCVTDSRAGRF
Trigger: GAACCTTCCTGCCCGGGAGTCTGTAACACAGCAGCACAGGACCGCGCTTCCTTTAGCAGTGCTGAGTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp AGAGTCAGACACTGGAGAAATCTTAAGGTACGTCCCTaGTGCTCCCGCCCCACTACCACAGAGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: RVRHWRNLKVRP*CSRPTTTELLG
Trigger: TCCCAGCAGCTCTGTGGTAGTGGGGCGGGAGCAGCAGGGACGTACCTTAAGATTTCTCCAGTGTCTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp CTGGCAAAGGACTGCCACTGCCATCTGACTCAACTGTaGCGATGTGGACGGAGTCACCGAGCTGCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LAKDCHCHLTQL*RCGRSHRAAFL
Trigger: AAGAAAAGCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATCAAAAGTCTTTTTCTTaGCAGTCACGCTGTAAGACG +
Preference number: 3 (lower is better)
Translates to: MPCPACSPQGDGARAGCYQKSFS*QSRCKT
Trigger: CGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTTG...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp AGGAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTAACAAGCCACTTCAAA +
Preference number: 3 (lower is better)
Translates to: RSPHSSSSWWRR*VRHPWVTSHFK
Trigger: TTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
3UTR GCA 72 bp CACGCTGTAAGACGAGGCTGCTGCTCCATGACCCTATaGTCTTCTCCTCTGGTTCTCGAAGCTGTCTGTAAC +
Preference number: 3 (lower is better)
Translates to: HAVRRGCCSMTL*SSPLVLEAVCN
Trigger: GTTACAGACAGCTTCGAGAACCAGAGGAGAAGAGCATAGGGTCATGGAGCAGCAGCCTCGTCTTACAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp TACAGGGCCGGAGACACCAGGCTTGGAAGTGACCACTaGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAA +
Preference number: 3 (lower is better)
Translates to: YRAGDTRLGSDH*PRADIKANFPK
Trigger: TTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACTTCCAAGCCTGGTGTCTCCGGCCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp ACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTaGCTGGGCAGGGCGCTTAGCGTAGCTGGAATGCGC +
Preference number: 3 (lower is better)
Translates to: TSHFKTGLCFVT*LGRALSVAGMR
Trigger: GCGCATTCCAGCTACGCTAAGCGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp GGACTGCCACTGCCATCTGACTCAACTGTGGCGATGTaGACGGAGTCACCGAGCTGCTTTTCTTTTGCAAAA +
Preference number: 3 (lower is better)
Translates to: GLPLPSDSTVAM*TESPSCFSFAK
Trigger: TTTTGCAAAAGAAAAGCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGAGTCAGATGGCAGTGGCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGTGTTTCCTGTTTGGTTaGATCTGTCTGCCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: SDHWPRADIKANFPKQEGCFLFG*ICLPLR
Trigger: CCTGAGAGGCAGACAGATCAAACCAAACAGGAAACA...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTCCAATTGTTGATATATaGAGTCCCCTTGATGTGAAT +
Preference number: 3 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGPIVDI*SPLDVN
Trigger: ATTCACATCAAGGGGACTCAATATATCAACAATTGG...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp TATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTaGCAACAGATCAAACATGCATTTCCTGTTTCCTGT +
Preference number: 3 (lower is better)
Translates to: YSGWDRALPTDT*QQIKHAFPVSC
Trigger: ACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
3UTR CCA 72 bp GGGGGTCACTCTGGTTATGCATATTCACACAGAACATaGTGCTACAATTGGGAAGCACAGGGTGTTACGGAC +
Preference number: 3 (lower is better)
Translates to: GGHSGYAYSHRT*CYNWEAQGVTD
Trigger: GTCCGTAACACCCTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATATGCATAACCAGAGTGACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR GCA 72 bp GGTCACTCTGGTTATGCATATTCACACAGAACATGGTaGTACAATTGGGAAGCACAGGGTGTTACGGACAGC +
Preference number: 3 (lower is better)
Translates to: GHSGYAYSHRTW*YNWEAQGVTDS
Trigger: GCTGTCCGTAACACCCTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATATGCATAACCAGAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CCA 72 bp GGTTATGCATATTCACACAGAACATGGTGCTACAATTaGGAAGCACAGGGTGTTACGGACAGCCCCGAGTAT +
Preference number: 3 (lower is better)
Translates to: GYAYSHRTWCYN*EAQGVTDSPEY
Trigger: ATACTCGGGGCTGTCCGTAACACCCTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATATGCATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp ACAGAGTCGAAGCCTGTCATCGTCCTCATAGACCAATaGGTAGCCACACGTACTTGTTTGGCATTACCAAGT +
Preference number: 3 (lower is better)
Translates to: TESKPVIVLIDQ*VATRTCLALPS
Trigger: ACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGGTCTATGAGGACGATGACAGGCTTCGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGCCAATTGTTGATATATaGAGTCCCCTTGATGTGAAT +
Preference number: 3 (lower is better)
Translates to: SDHWPRADIKANFPKQEGPIVDI*SPLDVN
Trigger: ATTCACATCAAGGGGACTCAATATATCAACAATTGG...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR-3UTR CAA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAA +
Preference number: 3 (lower is better)
Translates to: GILHNRLQETGIYHRKPSMSEAP*GNKPLQ
Trigger: TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp GTCACTGACACTGGGCTCATAGGCATTCATAAATCCTaGCGTGAAAGGAACTTCCTCTCGCCTTTGTTTAAG +
Preference number: 3 (lower is better)
Translates to: VTDTGLIGIHKS*RERNFLSPLFK
Trigger: CTTAAACAAAGGCGAGAGGAAGTTCCTTTCACGTCAGGATTTATGAATGCCTATGAGCCCAGTGTCAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp AGAAGGAAATACATAGTGATTCCTGAACCGGAAGAATaGACCCCATCTTCCAACTGTCACGGAATTATCACC +
Preference number: 3 (lower is better)
Translates to: RRKYIVIPEPEE*TPSSNCHGIIT
Trigger: GGTGATAATTCCGTGACAGTTGGAAGATGGGGTTCATTCTTCCGGTTCAGGAATCACTATGTATTTCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
3UTR-3UTR CAA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACCAAAAGTCTTTTTCTTaGCAGTCACGCTGTAAGACG +
Preference number: 3 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDQKSFS*QSRCKT
Trigger: CGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTTG...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR TCA 72 bp AAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATaGAAAGCTTCCTTGATATCTCTGGGCCCTTTCGCT +
Preference number: 3 (lower is better)
Translates to: KIQVKDPKALRE*KASLISLGPFA
Trigger: AGCGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
3UTR CCA 72 bp AAAGGGTTCAAGGTAGTTACAAGAATTACTACTGTTTaGCGTTTGCTGAAAGAAGTACGTGAGAATATTATA +
Preference number: 3 (lower is better)
Translates to: KGFKVVTRITTV*RLLKEVRENII
Trigger: TATAATATTCTCACGTACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCTTGTAACTACCTTGAACCCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGGGCTGGAAGACCACCTaGCACCTGGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLGWKTT*HLGGGA
Trigger: GGCCCCTCCTCCCAGGTGCCAGGTGGTCTTCCAGCC...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCACCAAACAGGTGCCTCTaGGGAGCAGGCCCATGCCGT +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGAPNRCL*GAGPCR
Trigger: ACGGCATGGGCCTGCTCCCCAGAGGCACCTGTTTGG...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGGTGCTGCTCGGCCTGTaGACGTCACCGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLVLLGL*TSPALP
Trigger: GGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCAC...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAGGAAGCGCGGTCCTGTaGTGCTGTGTTACAGACTCC +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGAGSAVL*CCVTDS
Trigger: GGAGTCTGTAACACAGCAGCACAGGACCGCGCTTCC...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAGACCACCTGGCACCTaGGAGGAGGGGCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGRPPGT*EEGPRA
Trigger: TGCCCGTGGCCCCTCCTCCCAGGTGCCAGGTGGTCT...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGCCAAACAGGTGCCTCTaGGGAGCAGGCCCATGCCGT +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLPNRCL*GAGPCR
Trigger: ACGGCATGGGCCTGCTCCCCAGAGGCACCTGTTTGG...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAATGTCCAGCAACTGTTaGAGACTGGCACCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGAMSSNC*RLAPRR
Trigger: ACGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACAT...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACTGCAGGCCTGTGGGCTaGGCCAGGCGGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNCRPVG*ARRSTR
Trigger: GCGAGTAGACCGCCTGGCTCAGCCCACAGGCCTGCA...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GGGCTCCAGGAGAGGGCTGAGAGAGTGCCTCCCAGATCTTGTGAACGGCATTCTGCTCACCAGCCGTGCTaGTCGGCCTGTGCACGTCAC +
Preference number: 4 (lower is better)
Translates to: GLQERAERVPPRSCERHSAHQPC*SACARH
Trigger: GTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGC...AGAATGCCGTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCTCCTGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGCCAGGAGGGAACTCATaGCCCTCTCTAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLPGGNS*PSLAPR
Trigger: CCTTGGAGCTAGAGAGGGTCATGAGTTCCCTCCTGG...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCACCTGCTGGCGCATGGTaGAAATTTCAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGAPAGAW*KFQGNS
Trigger: ACTGTTGCCCTGAAATTTTCACCATGCGCCAGCAGG...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTTGGGGAGCAGGCCCATaGCGTGTCCTGCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGWGAGP*RVLHVA
Trigger: GGCTACATGCAGGACACGGCATGGGCCTGCTCCCCA...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCGGCTGGAAGACCACCTaGCACCTGGGAGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCGWKTT*HLGGGA
Trigger: GGCCCCTCCTCCCAGGTGCCAGGTGGTCTTCCAGCC...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCACTCTGTTCTCCAAGATaGGGAGTCTGCCTAGCCATA +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGALCSPR*GVCLAI
Trigger: TATGGCTAGGCAGACTCCTCATCTTGGAGAACAGAG...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATATGTCCAGCAACTGTTaGAGACTGGCACCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: MPCPACSPQGDGARAGCYMSSNC*RLAPRR
Trigger: ACGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACAT...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCACTCCCCACAGACACGTaGCAACAGATCAAACATGCA +
Preference number: 4 (lower is better)
Translates to: LGSRPMPCPACSPQGDGALPTDT*QQIKHA
Trigger: TGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAG...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGACTGCCACTGCCATCTaGCTCAACTGTGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLTATAI*LNCGDV
Trigger: CACATCGCCACAGTTGAGTCAGATGGCAGTGGCAGT...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGGGGCAAGGGCGGGGTaGTATGGGATGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAGARAG*YGMLQA
Trigger: GGCCTGCAGCATCCCATAGCACCCCGCCCTTGCCCC...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGTACGTCCCTGCTaGTCCCGCCCCACTACCACA +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNKVRPC*SRPTTT
Trigger: TGTGGTAGTGGGGCGGGAGCAGCAGGGACGTACCTT...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGTGCTGCTCGGCCTGTaGACGTCACCGGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAVLLGL*TSPALP
Trigger: GGGAAGAGCCGGTGACGTGCACAGGCCGAGCAGCAC...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGGGGGCAAGGGCGGGGTaGTATGGGATGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGGARAG*YGMLQA
Trigger: GGCCTGCAGCATCCCATAGCACCCCGCCCTTGCCCC...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCATGGGGAGCAGGCCCATaGCGTGTCCTGCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPWGAGP*RVLHVA
Trigger: GGCTACATGCAGGACACGGCATGGGCCTGCTCCCCA...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GGGCTCCAGGAGAGGGCTGAGAGAGTGCCTCCCAGATCTTGTGAACGGCATTCTTCAACTGTGGCGATGTaGACGGAGTCACCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQERAERVPPRSCERHSSTVAM*TESPSC
Trigger: GCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGA...AGAATGCCGTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCTCCTGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTCAACATAAGTATCTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGAGACCACCTGGCACCTaGGAGGAGGGGCCACGGGCA +
Preference number: 4 (lower is better)
Translates to: LNISILFRMGQGPPHRHVRPPGT*EEGPRA
Trigger: TGCCCGTGGCCCCTCCTCCCAGGTGCCAGGTGGTCT...CACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATACTTATGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCAGGGCGTGCAGGCCTGTGGGCTaGGCCAGGCGGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: VTSHFKTGLCFVTCLGRACRPVG*ARRSTR
Trigger: GCGAGTAGACCGCCTGGCTCAGCCCACAGGCCTGCA...CGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATTGCTCCATGACCCTATaGTCTTCTCCTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: MPCPACSPQGDGARAGCYCSMTL*SSPLVL
Trigger: GAGAACCAGAGGAGAAGAGCATAGGGTCATGGAGCA...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCACTGCCACTGCCATCTaGCTCAACTGTGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRTATAI*LNCGDV
Trigger: CACATCGCCACAGTTGAGTCAGATGGCAGTGGCAGT...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAATCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQSWWRR*VRHPWV
Trigger: TACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGA...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACATCCTCATCCAGACTTaGCCTTTTGTCATCAGATGT +
Preference number: 4 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYILIQT*PFVIRC
Trigger: ACATCTGATGACAAAAGGGCAAGTCTGGATGAGGAT...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACGCTGTAAGACGAGGCTaGTGCTCCATGACCCTATGC +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNAVRRG*CSMTLC
Trigger: GCATAGGGTCATGGAGCAGCAGCCTCGTCTTACAGC...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACCCCGGGATCTCAGAGTaGCGCTGCCTGCTTACTCAG +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNPGISE*RCLLTQ
Trigger: CTGAGTAAGCAGGCAGCGGCACTCTGAGATCCCGGG...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACTATGGGACCATTCCCTaGCCTCCACCTGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNYGTIP*PPPAPA
Trigger: TGCTGGGGCAGGTGGAGGCCAGGGAATGGTCCCATA...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGAAGGGCGGGGTGCTATaGGATGCTGCAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGKGGVL*DAAGLW
Trigger: CCACAGGCCTGCAGCATCCCATAGCACCCCGCCCTT...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAATAGCGCGGAGAAGATaGCAGCAGTTACGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQIARRR*QQLRRR
Trigger: CCGGCGCCGTAACTGCTGCCATCTTCTCCGCGCTAT...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495694.5
CDS-3UTR TCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGTGCCAATCAAGGACCTaGCGGCCGAACGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKCQSRT*RPNAAI
Trigger: TATGGCTGCGTTCGGCCGTCAGGTCCTTGATTGGCA...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAATGCCAATCAAGGACCTaGCGGCCGAACGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQCQSRT*RPNAAI
Trigger: TATGGCTGCGTTCGGCCGTCAGGTCCTTGATTGGCA...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAGGAGGGAACTCATaGCCCTCTCTAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKPGGNS*PSLAPR
Trigger: CCTTGGAGCTAGAGAGGGTCATGAGTTCCCTCCTGG...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCATGTCCAGCAACTGTTaGAGACTGGCACCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCMSSNC*RLAPRR
Trigger: ACGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACAT...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGATGTCCAGCAACTGTTaGAGACTGGCACCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRMSSNC*RLAPRR
Trigger: ACGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACAT...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCACCTTCAGGTGGAAATaGGGCTCTCTGTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRTFRWK*GSLWIG
Trigger: CCCTATCCACAGAGAGCCTCATTTCCACCTGAAGGT...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGTCCCTGGCCTCCACCTaGCCCAGCACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EAPLGNKPLQNRSMFCYVSLAST*PSTLQA
Trigger: GGCCTGGAGAGTGCTGGGGCAGGTGGAGGCCAGGGA...CACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACGCAAAGGACTGCCACTaGCATCTGACTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNAKDCH*HLTQLW
Trigger: CCACAGTTGAGTCAGATGGCAGTGGCAGTCCTTTGC...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAAGCGCGGTCCTGTGCTaGTGTGTTACAGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTSAVLC*CVTDSR
Trigger: CCGGGAGTCTGTAACACAGCAGCACAGGACCGCGCT...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGAAGGTACGTCCCTGCTaGTCCCGCCCCACTACCACA +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGKVRPC*SRPTTT
Trigger: TGTGGTAGTGGGGCGGGAGCAGCAGGGACGTACCTT...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCTTCTTATCAGGGGTTTaGTACCGTCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCFLSGV*YRPRRS
Trigger: GGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAA...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCGTATCTTATTCAGGATaGGACAGGGCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRVSYSG*DRALPT
Trigger: TGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATAC...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCAGGCCAGCACAGTCTaGCACTACAGACTACAGGGC +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKQASTV*HYRLQG
Trigger: GCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTG...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGGGGGAGATAACTGTATaGGACCATTCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRGEITV*DHSLAS
Trigger: GGAGGCCAGGGAATGGTCCCATACAGTTATCTCCCC...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAGGGGAGATAACTGTATaGGACCATTCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPGEITV*DHSLAS
Trigger: GGAGGCCAGGGAATGGTCCCATACAGTTATCTCCCC...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTTGGTGTCCCCCACCGTaGAATGTATGTGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGWCPPP*NVCELK
Trigger: CTTTAGCTCACATACATTCCACGGTGGGGGACACCA...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACTTCTCAAGGAGGCACTaGACAAGATTCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNFSRRH*TRFLLH
Trigger: GTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAGAA...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp GCCAGGTTTCTAGCCTTGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGGCGCACCTGGTCTAGCCACTaGCAAATACACCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARFLALSFLNYCLKPGGRTWSSH*QIHLQV
Trigger: CACCTGAAGGTGTATTTGTCAGTGGCTAGACCAGGT...GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGCTGTTTGGCGTTTGCTaGAAGAAGTACGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLLFGVC*KKYVRI
Trigger: TATTCTCACGTACTTCTTTCAGCAAACGCCAAACAG...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTCCTGAAGGACCTGCCTaGGGCCATTTTATAGTTAAC +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGPEGPA*GHFIVN
Trigger: GTTAACTATAAAATGGCCTCAGGCAGGTCCTTCAGG...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449133.1
ENST00000495694.5
CDS-3UTR GCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTGAACAAGATTCCTCCTaGACTCTGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGEQDSS*TLVPAH
Trigger: ATGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTC...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR GCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGCTGTAAGACGAGGCTaGTGCTCCATGACCCTATGC +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKAVRRG*CSMTLC
Trigger: GCATAGGGTCATGGAGCAGCAGCCTCGTCTTACAGC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCGGCAAGGCCGCAGCCTaGAGCTCACCAGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESGKAAA*SSPAVL
Trigger: CAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCC...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGGGCAGTTTCAATAACTaGGGACTTTTCTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLGSFNN*GLFFKT
Trigger: GGTCTTGAAGAAAAGTCCCCAGTTATTGAAACTGCC...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTACATGGTGCTACAATTaGGAAGCACAGGGTGTTACG +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGTWCYN*EAQGVT
Trigger: CGTAACACCCTGTGCTTCCCAATTGTAGCACCATGT...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 72 bp TCTCTCTCTGACTCACAGCCAGCCAGGTTTCTAGCCTaGTCATTCCTAAACTACTGCCTCAAGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SLSDSQPARFLA*SFLNYCLKPGG
Trigger: CCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGCTGGCTGTGAGTCAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTTCTCAAGGAGGCACTaGACAAGATTCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRFSRRH*TRFLLH
Trigger: GTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAGAA...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCTTCTCAAGGAGGCACTaGACAAGATTCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCFSRRH*TRFLLH
Trigger: GTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAGAA...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACCCTGCTGGCGCATGGTaGAAATTTCAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNPAGAW*KFQGNS
Trigger: ACTGTTGCCCTGAAATTTTCACCATGCGCCAGCAGG...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGATATTTAGAAAGTGTTaGAGACCGCCGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLIFRKC*RPPLES
Trigger: ACTTTCTAGCGGCGGTCTTCAACACTTTCTAAATAT...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAACCTGGTCTAGCCACTaGCAAATACACCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPTWSSH*QIHLQV
Trigger: CACCTGAAGGTGTATTTGTCAGTGGCTAGACCAGGT...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGGCAGGCAGCCTGGACTaGGGTAGCTGTAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMAGSLD*GSCRIQ
Trigger: TTGAATTCTACAGCTACCTCAGTCCAGGCTGCCTGC...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACCCTGAAGGACCTGCCTaGGGCCATTTTATAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNPEGPA*GHFIVN
Trigger: GTTAACTATAAAATGGCCTCAGGCAGGTCCTTCAGG...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449133.1
ENST00000495694.5
CDS-3UTR GCA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATGAGCGCTTCCTCATTTaGATAATAGGCAGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: MPCPACSPQGDGARAGCYERFLI*IIGSFN
Trigger: ATTGAAACTGCCTATTATGCAAATGAGGAAGCGCTC...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCTCCCTGGCCTCCACCTaGCCCAGCACTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFSLAST*PSTLQA
Trigger: GGCCTGGAGAGTGCTGGGGCAGGTGGAGGCCAGGGA...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAACCACTGGCAAAGGACTaGCACTGCCATCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQPLAKD*HCHLTQ
Trigger: TTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGG...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAACATCTGACTCAACTGTaGCGATGTGGACGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQHLTQL*RCGRSH
Trigger: GTGACTCCGTCCACATCGCCACAGTTGAGTCAGATG...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
3UTR CAA 72 bp CATCGTCCTCATAGACCAATGAGTAGCCACACGTACTaGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: HRPHRPMSSHTY*FGITKCPGKAA
Trigger: TGCGGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGGTCTATGAGGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAAGATAACTCCTCAATaGCCCCTCCATTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQKITPQ*PLHWRL
Trigger: CAGCCTCCAATGGAGGGGTCATTGAGGAGTTATCTT...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR TCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCGTTTCCTGTTTGGTTTaGTCTGTCTGCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCVSCLV*SVCLSG
Trigger: ACCTGAGAGGCAGACAGATCAAACCAAACAGGAAAC...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAACTCCCCACAGACACGTaGCAACAGATCAAACATGCA +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQLPTDT*QQIKHA
Trigger: TGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAG...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTCAACATGTCACTGCATaGAAGATGAATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGQHVTA*KMNLWL
Trigger: CAACCAGAGATTCATCTTTCATGCAGTGACATGTTG...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGTTTACAATGTCTGGATaGTTAATTCCCATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLFTMSG*LIPILK
Trigger: CTTCAGGATGGGAATTAAGCATCCAGACATTGTAAA...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCLGICV*PFLSGV
Trigger: AACCCCTGATAAGAAGGGGCAGACACAGATCCCTAA...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAGGGCGGGGTGCTATAAAAGTCTTTTTCTTTaGAGTCACGCTGTAAGACGA +
Preference number: 4 (lower is better)
Translates to: MPCPACSPQGDGARAGCYKSLFL*SHAVRR
Trigger: TCGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTT...ATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTAGGAAGCGCGGTCCTGTaGTGCTGTGTTACAGACTCC +
Preference number: 4 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLGSAVL*CCVTDS
Trigger: GGAGTCTGTAACACAGCAGCACAGGACCGCGCTTCC...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTTAAGGTACGTCCCTaGTGCTCCCGCCCCACTACC +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCLKVRP*CSRPTT
Trigger: GGTAGTGGGGCGGGAGCAGCAGGGACGTACCTTAAG...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCGGCAAGGCCGCAGCCTaGAGCTCACCAGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIGKAAA*SSPAVL
Trigger: CAGCACGGCTGGTGAGCTGCAGGCTGCGGCCTTGCC...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACTCACACAGAACATGGTaGTACAATTGGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNSHRTW*YNWEAQ
Trigger: CTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGA...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCTGGGCAGCCACGTTCTaGTACGAAACTGTATGTCCA +
Preference number: 4 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAWAATF*YETVCP
Trigger: TGGACATACAGTTTCGTAGCAGAACGTGGCTGCCCA...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGCATATCCTTTGTCAGTaGTCATCAGAATGCACATTA +
Preference number: 4 (lower is better)
Translates to: PGQHSLALQTTGPETPGLHILCQ*SSECTL
Trigger: TAATGTGCATTCTGATGAGCACTGACAAAGGATATG...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACACACACACAGGCTCTaGATTCAGACCCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPHTHRL*IQTQEN
Trigger: ATTCTCTTGGGTCTGAATCCAGAGCCTGTGTGTGTG...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCGCTTTTGCAGGTAACTaGAGCGCTTCCTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCAFAGN*SASSFA
Trigger: TGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGC...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAGCTTTTGCAGGTAACTaGAGCGCTTCCTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPAFAGN*SASSFA
Trigger: TGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGC...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGCATCTGACTCAACTGTaGCGATGTGGACGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGHLTQL*RCGRSH
Trigger: GTGACTCCGTCCACATCGCCACAGTTGAGTCAGATG...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCCTCCACAGCGGTGTCTaGACTAATGGTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGLHSGV*TNGVPH
Trigger: GTGGGGGACACCATTAGTCCAGACACCGCTGTGGAG...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTGCCAATCAAGGACCTaGCGGCCGAACGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGCQSRT*RPNAAI
Trigger: TATGGCTGCGTTCGGCCGTCAGGTCCTTGATTGGCA...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTCCAGGAGGGAACTCATaGCCCTCTCTAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGPGGNS*PSLAPR
Trigger: CCTTGGAGCTAGAGAGGGTCATGAGTTCCCTCCTGG...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGAACTTGTATTCCAGTTaGCCCAGGTCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMNLYSS*PRSSRR
Trigger: TCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTT...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTCAAAAACTCAGCTTCTaGAACTCTGAGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGQKLSF*NSENVL
Trigger: AAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTG...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCACTGCCACTGCCATCTaGCTCAACTGTGGCGATGTG +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGTATAI*LNCGDV
Trigger: CACATCGCCACAGTTGAGTCAGATGGCAGTGGCAGT...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR TCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACTCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYSWWRR*VRHPWV
Trigger: TACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGA...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR TCA 90 bp GTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCAGGGCGACCTTCAGGTGGAAATaGGGCTCTCTGTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: VTSHFKTGLCFVTCLGRATFRWK*GSLWIG
Trigger: CCCTATCCACAGAGAGCCTCATTTCCACCTGAAGGT...CGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAACCGTGGAATGTATGTaGGCTAAAGACAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPTVECM*AKDRIS
Trigger: TGAGATCCTGTCTTTAGCTCACATACATTCCACGGT...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCGAACAAGATTCCTCCTaGACTCTGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAEQDSS*TLVPAH
Trigger: ATGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTC...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCGTGTCGTTAATGTCCTaGTGGCGCATGGTGAAAATT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCVSLMS*WRMVKI
Trigger: AATTTTCACCATGCGCCAGCAGGACATTAACGACAC...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTCTTAAGGTACGTCCCTaGTGCTCCCGCCCCACTACC +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCLKVRP*CSRPTT
Trigger: GGTAGTGGGGCGGGAGCAGCAGGGACGTACCTTAAG...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTGCTCACCAGCCGTGCTaGTCGGCCTGTGCACGTCAC +
Preference number: 4 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASAHQPC*SACARH
Trigger: GTGACGTGCACAGGCCGAGCAGCACGGCTGGTGAGC...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACATTCCTCCTGCACTCTaGTTCCTGCACATAGTTATT +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNIPPAL*FLHIVI
Trigger: AATAACTATGTGCAGGAACCAGAGTGCAGGAGGAAT...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGCTTTTGCAGGTAACTaGAGCGCTTCCTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKAFAGN*SASSFA
Trigger: TGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAAGTACAGGCTGTCCTaGCCAAAAACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNKYRLS*PKTQLL
Trigger: CAGAAGCTGAGTTTTTGGCCAGGACAGCCTGTACTT...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGAAGTACAGGCTGTCCTaGCCAAAAACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKKYRLS*PKTQLL
Trigger: CAGAAGCTGAGTTTTTGGCCAGGACAGCCTGTACTT...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGCTTGGAAGTGACCACTaGCCAAGAGCTGACATAAAA +
Preference number: 4 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRLGSDH*PRADIK
Trigger: TTTTATGTCAGCTCTTGGCCAGTGGTCACTTCCAAG...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCTCAACTGTGGCGATGTaGACGGAGTCACCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCSTVAM*TESPSC
Trigger: GCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGA...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTTGGTGTCCCCCACCGTaGAATGTATGTGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTWCPPP*NVCELK
Trigger: CTTTAGCTCACATACATTCCACGGTGGGGGACACCA...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTCTCCACAGCGGTGTCTaGACTAATGGTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFLHSGV*TNGVPH
Trigger: GTGGGGGACACCATTAGTCCAGACACCGCTGTGGAG...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTCCACACGTACTTGTTTaGCATTACCAAGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTPHVLV*HYQVSG
Trigger: CCCGGACACTTGGTAATGCCAAACAAGTACGTGTGG...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GGGCTCCAGGAGAGGGCTGAGAGAGTGCCTCCCAGATCTTGTGAACGGCATTCTTATTCACACAGAACATaGTGCTACAATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLQERAERVPPRSCERHSYSHRT*CYNWEA
Trigger: TGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATA...AGAATGCCGTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCTCCTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTCAGATAGGCAGCCCCTaGGCAGCCACGTTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCQIGSP*AATFCY
Trigger: GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTG...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGAATGATGCCTTCTTCTaGAAACCTCCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRNDAFF*KPPEGP
Trigger: AGGTCCTTCAGGAGGTTTCCAGAAGAAGGCATCATT...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449133.1
ENST00000495694.5
CDS-3UTR TCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAAACTTGTATTCCAGTTaGCCCAGGTCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTNLYSS*PRSSRR
Trigger: TCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTT...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCTCCTGGTGGCGCAGATaGGTGAGGCACCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFSWWRR*VRHPWV
Trigger: TACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGA...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTAGCCTCCCAGATCTTGTaGACGGCATTCTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLASQIL*TAFCWN
Trigger: GTTCCAACAGAATGCCGTTCACAAGATCTGGGAGGC...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATGAGGGCCTGGGCTGCTaGGAAATTCCGGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNEGLGC*EIPGAP
Trigger: TGGAGCCCCCGGAATTTCTCAGCAGCCCAGGCCCTC...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGGTCCTCATAGACCAATaGGTAGCCACACGTACTTGT +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGVLIDQ*VATRTC
Trigger: ACAAGTACGTGTGGCTACTCATTGGTCTATGAGGAC...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAGAACAAGATTCCTCCTaGACTCTGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTEQDSS*TLVPAH
Trigger: ATGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTC...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp CTCAACATAAGTATCTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: LNISILFRMGQGPPHRHVLGICV*PFLSGV
Trigger: AACCCCTGATAAGAAGGGGCAGACACAGATCCCTAA...CACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATACTTATGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp GAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGTCATTCCTAAACTACTaGCTCAAGCCAGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: EAPLGNKPLQNRSMFCYVSFLNY*LKPGGR
Trigger: GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGA...CACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCATTCCTCCTGCACTCTaGTTCCTGCACATAGTTATT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCIPPAL*FLHIVI
Trigger: AATAACTATGTGCAGGAACCAGAGTGCAGGAGGAAT...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAGGCAGTTTCAATAACTaGGGACTTTTCTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPGSFNN*GLFFKT
Trigger: GGTCTTGAAGAAAAGTCCCCAGTTATTGAAACTGCC...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCATCTGACTCAACTGTaGCGATGTGGACGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PLGNKPLQNRSMFCYVPGHLTQL*RCGRSH
Trigger: GTGACTCCGTCCACATCGCCACAGTTGAGTCAGATG...CCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCTCTCAGCAGGCAGCCTaGACTGAGGTAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGSQQAA*TEVAVE
Trigger: TTCTACAGCTACCTCAGTCCAGGCTGCCTGCTGAGA...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTCAGATAGGCAGCCCCTaGGCAGCCACGTTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: GILHNRLQETGIYHRKPSQIGSP*AATFCY
Trigger: GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTG...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ACTGGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATGCCAATCAAGGACCTaGCGGCCGAACGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: TGILHNRLQETGIYHRKPCQSRT*RPNAAI
Trigger: TATGGCTGCGTTCGGCCGTCAGGTCCTTGATTGGCA...TGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CACTGCATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCGTTTCCTGTTTGGTTTaGTCTGTCTGCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HCMKDESLVGLGQLCSSCVSCLV*SVCLSG
Trigger: ACCTGAGAGGCAGACAGATCAAACCAAACAGGAAAC...GCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCATGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTATACATAGTGATTCCTaGACCGGAAGAATGAACCCC +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTIHSDS*TGRMNP
Trigger: GGGGTTCATTCTTCCGGTTCAGGAATCACTATGTAT...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTCCACTGGCCAAGAGCTaGCATAAAAGCCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGPLAKS*HKSQLP
Trigger: GGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGG...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCAACATGTCACTGCATaGAAGATGAATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMQHVTA*KMNLWL
Trigger: CAACCAGAGATTCATCTTTCATGCAGTGACATGTTG...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AGGAAGGGCCTGTTCTTCACAAAGATAAAGAAAACTGCCAGCATTTTGCTGGCCGCAGGCAGCCTGGACTaGGGTAGCTGTAGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RKGLFFTKIKKTASILLAAGSLD*GSCRIQ
Trigger: TTGAATTCTACAGCTACCTCAGTCCAGGCTGCCTGC...GGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTTGTGAAGAACAGGCCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CACTGCATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCACAGAGGGGCAACTGTaGAAAATCTTGGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: HCMKDESLVGLGQLCSSCTEGQL*KILVTC
Trigger: GCAAGTCACCAAGATTTTGCACAGTTGCCCCTCTGT...GCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGGCAAAGGACTGCCACTaGCATCTGACTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: EAPLGNKPLQNRSMFCYVAKDCH*HLTQLW
Trigger: CCACAGTTGAGTCAGATGGCAGTGGCAGTCCTTTGC...CACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCGCAAAGGACTGCCACTaGCATCTGACTCAACTGTGG +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCAKDCH*HLTQLW
Trigger: CCACAGTTGAGTCAGATGGCAGTGGCAGTCCTTTGC...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCAGCGCGGTCCTGTGCTaGTGTGTTACAGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLISAVLC*CVTDSR
Trigger: CCGGGAGTCTGTAACACAGCAGCACAGGACCGCGCT...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTCAGAGTGCCGCTGCCTaGTTACTCAGCACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGQSAAA*LLSTAK
Trigger: TTTAGCAGTGCTGAGTAAGCAGGCAGCGGCACTCTG...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACGTTCACCAAGACATCTaGTTCAAAGAGAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNVHQDI*FKESCE
Trigger: TTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAAC...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTCAGTGCTCATCAGAATaGACATTAAAATGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGQCSSE*TLKWVY
Trigger: ATAAACCCATTTTAATGTGCATTCTGATGAGCACTG...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAATTCCTCCTGCACTCTaGTTCCTGCACATAGTTATT +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQIPPAL*FLHIVI
Trigger: AATAACTATGTGCAGGAACCAGAGTGCAGGAGGAAT...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGGGCAGTTTCAATAACTaGGGACTTTTCTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMGSFNN*GLFFKT
Trigger: GGTCTTGAAGAAAAGTCCCCAGTTATTGAAACTGCC...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCTTCTTATCAGGGGTTTaGTACCGTCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESFLSGV*YRPRRS
Trigger: GGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAA...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCGTATCTTATTCAGGATaGGACAGGGCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCVSYSG*DRALPT
Trigger: TGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATAC...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTGTATCTTATTCAGGATaGGACAGGGCCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGVSYSG*DRALPT
Trigger: TGTGGGGAGGGCCCTGTCCCATCCTGAATAAGATAC...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTTATGCTCTTCTCCTCTaGTTCTCGAAGCTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTYALLL*FSKLSV
Trigger: TACAGACAGCTTCGAGAACCAGAGGAGAAGAGCATA...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 72 bp TTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAAAACAGGTCTATGTTT +
Preference number: 4 (lower is better)
Translates to: FIFLVAQMSEAP*GNKPLQNRSMF
Trigger: AAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTAAGATAACTCCTCAATaGCCCCTCCATTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGKITPQ*PLHWRL
Trigger: CAGCCTCCAATGGAGGGGTCATTGAGGAGTTATCTT...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTAAGATAACTCCTCAATaGCCCCTCCATTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFKITPQ*PLHWRL
Trigger: CAGCCTCCAATGGAGGGGTCATTGAGGAGTTATCTT...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTCCTGAACCGGAAGAATaGACCCCATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGPEPEE*TPSSNC
Trigger: ACAGTTGGAAGATGGGGTTCATTCTTCCGGTTCAGG...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTGCCTCCCAGATCTTGTaGACGGCATTCTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCASQIL*TAFCWN
Trigger: GTTCCAACAGAATGCCGTTCACAAGATCTGGGAGGC...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATGAGGGCCTGGGCTGCTaGGAAATTCCGGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDEGLGC*EIPGAP
Trigger: TGGAGCCCCCGGAATTTCTCAGCAGCCCAGGCCCTC...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACACTGTTTGGCGTTTGCTaGAAGAAGTACGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTLFGVC*KKYVRI
Trigger: TATTCTCACGTACTTCTTTCAGCAAACGCCAAACAG...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCGAACAAGATTCCTCCTaGACTCTGGTTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGEQDSS*TLVPAH
Trigger: ATGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTC...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCAGGGCGGTGTCGTTAATGTCCTaGTGGCGCATGGTGAAAATT +
Preference number: 4 (lower is better)
Translates to: VTSHFKTGLCFVTCLGRAVSLMS*WRMVKI
Trigger: AATTTTCACCATGCGCCAGCAGGACATTAACGACAC...CGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTAAAATCTTGGTGACTTaGTGTACCGTGAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTKILVT*CTVKRH
Trigger: GTGCCTTTTCACGGTACAGCAAGTCACCAAGATTTT...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACTCTTTTACTCTGCTGTaGACTGAATACCATTATGAA +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNSFTLL*TEYHYE
Trigger: TTCATAATGGTATTCAGTGCACAGCAGAGTAAAAGA...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCAAAGATAAAGAAAACTaGCAGCATTTTGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCKDKEN*QHFAGL
Trigger: AAGGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTT...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACCCACTGGCAAAGGACTaGCACTGCCATCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYPLAKD*HCHLTQ
Trigger: TTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGG...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTCCACTGGCAAAGGACTaGCACTGCCATCTGACTCAA +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCPLAKD*HCHLTQ
Trigger: TTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGG...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACTTATCAACATGTCACTaGATGAAAGATGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNLSTCH*MKDESL
Trigger: CAGAGATTCATCTTTCATGCAGTGACATGTTGATAA...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTAGGGTAGCTTTTGCTTaGTTTCTCCCACGTCCATCC +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGRVAFA*FLPRPS
Trigger: GGATGGACGTGGGAGAAAGCAAGCAAAAGCTACCCT...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACAGGCAGTTTCAATAACTaGGGACTTTTCTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTGSFNN*GLFFKT
Trigger: GGTCTTGAAGAAAAGTCCCCAGTTATTGAAACTGCC...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCGCTTTTGCAGGTAACTaGAGCGCTTCCTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGAFAGN*SASSFA
Trigger: TGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGC...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATTATGGGACCATTCCCTaGCCTCCACCTGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNYGTIP*PPPAPA
Trigger: TGCTGGGGCAGGTGGAGGCCAGGGAATGGTCCCATA...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTTCAACTGTGGCGATGTaGACGGAGTCACCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASSTVAM*TESPSC
Trigger: GCAGCTCGGTGACTCCGTCCACATCGCCACAGTTGA...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACGTAAGAGTCAGACACTaGAGAAATCTTAAGGTACGT +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNVRVRH*RNLKVR
Trigger: ACGTACCTTAAGATTTCTCCAGTGTCTGACTCTTAC...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTCTCAGCAGGCAGCCTaGACTGAGGTAGCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCSQQAA*TEVAVE
Trigger: TTCTACAGCTACCTCAGTCCAGGCTGCCTGCTGAGA...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACAAGATAACTCCTCAATaGCCCCTCCATTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYKITPQ*PLHWRL
Trigger: CAGCCTCCAATGGAGGGGTCATTGAGGAGTTATCTT...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCGTTTCCTGTTTGGTTTaGTCTGTCTGCCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCVSCLV*SVCLSG
Trigger: ACCTGAGAGGCAGACAGATCAAACCAAACAGGAAAC...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCCCTGAACCGGAAGAATaGACCCCATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESPEPEE*TPSSNC
Trigger: ACAGTTGGAAGATGGGGTTCATTCTTCCGGTTCAGG...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTACAGAGGGGCAACTGTaGAAAATCTTGGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFTEGQL*KILVTC
Trigger: GCAAGTCACCAAGATTTTGCACAGTTGCCCCTCTGT...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCTTGGTTAGTGAATACTaGAAGTACTCACTCTTTACA +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCLVSEY*KYSLFT
Trigger: TGTAAAGAGTGAGTACTTGCAGTATTCACTAACCAA...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAACAACAGATCAAACATaGATTTCCTGTTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPTTDQT*ISCFLF
Trigger: AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGAAAGATAAAGAAAACTaGCAGCATTTTGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMKDKEN*QHFAGL
Trigger: AAGGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTT...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCTGCTCCATGACCCTATaGTCTTCTCCTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESCSMTL*SSPLVL
Trigger: GAGAACCAGAGGAGAAGAGCATAGGGTCATGGAGCA...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTTTCTTCACAATCGTTTaGAAGAGACTGGGATATACC +
Preference number: 4 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTFFTIV*KRLGYT
Trigger: GGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAA...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATATCTCAGAGTGCCGCTaGCTGCTTACTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDISECR*LLTQHC
Trigger: GCAGTGCTGAGTAAGCAGGCAGCGGCACTCTGAGAT...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAGCAATTCATTAATATaGGCATTGCTGAAACCCATG +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQSNSLI*ALLKPM
Trigger: CATGGGTTTCAGCAATGCCCATATTAATGAATTGCT...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCACACACACAGGCTCTaGATTCAGACCCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCHTHRL*IQTQEN
Trigger: ATTCTCTTGGGTCTGAATCCAGAGCCTGTGTGTGTG...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTCACACACACAGGCTCTaGATTCAGACCCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGHTHRL*IQTQEN
Trigger: ATTCTCTTGGGTCTGAATCCAGAGCCTGTGTGTGTG...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTTTCTTATCAGGGGTTTaGTACCGTCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPFLSGV*YRPRRS
Trigger: GGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAA...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCCCACACGTACTTGTTTaGCATTACCAAGTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESPHVLV*HYQVSG
Trigger: CCCGGACACTTGGTAATGCCAAACAAGTACGTGTGG...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCAGAATTACTACTGTTTaGCGTTTGCTGAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCRITTV*RLLKEV
Trigger: TACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCT...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCAAGGGCGGGGTGCTATaGGATGCTGCAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIKGGVL*DAAGLW
Trigger: CCACAGGCCTGCAGCATCCCATAGCACCCCGCCCTT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTTTCTCAAGGAGGCACTaGACAAGATTCCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GILHNRLQETGIYHRKPSFSRRH*TRFLLH
Trigger: GTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAGAA...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCCTGCTGGCGCATGGTaGAAATTTCAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPPAGAW*KFQGNS
Trigger: ACTGTTGCCCTGAAATTTTCACCATGCGCCAGCAGG...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCCCACTGGCCAAGAGCTaGCATAAAAGCCAACTTCCC +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIPLAKS*HKSQLP
Trigger: GGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGG...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGTGTCGTTAATGTCCTaGTGGCGCATGGTGAAAATT +
Preference number: 4 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFVSLMS*WRMVKI
Trigger: AATTTTCACCATGCGCCAGCAGGACATTAACGACAC...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAATTGGTTAGTGAATACTaGAAGTACTCACTCTTTACA +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQLVSEY*KYSLFT
Trigger: TGTAAAGAGTGAGTACTTGCAGTATTCACTAACCAA...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACACAACAGATCAAACATaGATTTCCTGTTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNTTDQT*ISCFLF
Trigger: AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGAAAAGTCTTTTTCTTTaGAGTCACGCTGTAAGACGA +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGKSLFL*SHAVRR
Trigger: TCGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTT...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAATTATCAACATGTCACTaGATGAAAGATGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQLSTCH*MKDESL
Trigger: CAGAGATTCATCTTTCATGCAGTGACATGTTGATAA...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCCCGGGATCTCAGAGTaGCGCTGCCTGCTTACTCAG +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDPGISE*RCLLTQ
Trigger: CTGAGTAAGCAGGCAGCGGCACTCTGAGATCCCGGG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCAGTGCTCATCAGAATaGACATTAAAATGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKQCSSE*TLKWVY
Trigger: ATAAACCCATTTTAATGTGCATTCTGATGAGCACTG...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGCATATCCTTTGTCAGTaGTCATCAGAATGCACATTA +
Preference number: 4 (lower is better)
Translates to: SDHWPRADIKANFPKQEGHILCQ*SSECTL
Trigger: TAATGTGCATTCTGATGAGCACTGACAAAGGATATG...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTATGCTCTTCTCCTCTaGTTCTCGAAGCTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGYALLL*FSKLSV
Trigger: TACAGACAGCTTCGAGAACCAGAGGAGAAGAGCATA...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTACATGGTGCTACAATTaGGAAGCACAGGGTGTTACG +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCTWCYN*EAQGVT
Trigger: CGTAACACCCTGTGCTTCCCAATTGTAGCACCATGT...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCCAGGAGGGAACTCATaGCCCTCTCTAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDPGGNS*PSLAPR
Trigger: CCTTGGAGCTAGAGAGGGTCATGAGTTCCCTCCTGG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTCCCCACAGACACGTaGCAACAGATCAAACATGCA +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPLPTDT*QQIKHA
Trigger: TGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAG...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCCTGAACCGGAAGAATaGACCCCATCTTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPPEPEE*TPSSNC
Trigger: ACAGTTGGAAGATGGGGTTCATTCTTCCGGTTCAGG...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTAGAAAGTCGTCACTaGCACTGGGCTCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPLESRH*HWAHRH
Trigger: ATGCCTATGAGCCCAGTGTCAGTGACGACTTTCTAG...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACCTAGAAAGTCGTCACTaGCACTGGGCTCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDLESRH*HWAHRH
Trigger: ATGCCTATGAGCCCAGTGTCAGTGACGACTTTCTAG...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTAGGCCTTAAGAAGCCATaGAAAATTAACCAGTACATC +
Preference number: 4 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLGLKKP*KINQYI
Trigger: GATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCC...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATAGAGGGCTGAGAGAGTaGCTCCCAGATCTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNRGLRE*LPDLVN
Trigger: GTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCT...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATAGGGTAGCTTTTGCTTaGTTTCTCCCACGTCCATCC +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDRVAFA*FLPRPS
Trigger: GGATGGACGTGGGAGAAAGCAAGCAAAAGCTACCCT...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACTCACACAGAACATGGTaGTACAATTGGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYSHRTW*YNWEAQ
Trigger: CTGTGCTTCCCAATTGTAGCACCATGTTCTGTGTGA...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATTGGGCAGCCACGTTCTaGTACGAAACTGTATGTCCA +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDWAATF*YETVCP
Trigger: TGGACATACAGTTTCGTAGCAGAACGTGGCTGCCCA...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCATTCCTCCTGCACTCTaGTTCCTGCACATAGTTATT +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCIPPAL*FLHIVI
Trigger: AATAACTATGTGCAGGAACCAGAGTGCAGGAGGAAT...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTCCTGTTTCCTGTTTaGTTTGATCTGTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGFLFPV*FDLSAS
Trigger: AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAA...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCAGGCCAGCACAGTCTaGCACTACAGACTACAGGGC +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDQASTV*HYRLQG
Trigger: GCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCGTAAGAGTCAGACACTaGAGAAATCTTAAGGTACGT +
Preference number: 4 (lower is better)
Translates to: PWVTSHFKTGLCFVTCLGVRVRH*RNLKVR
Trigger: ACGTACCTTAAGATTTCTCCAGTGTCTGACTCTTAC...GCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTCCTAGGTTAAGCAGTTaGCAACATTTTGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFPRLSS*QHFASL
Trigger: CAGTGAAGCAAAATGTTGCCAACTGCTTAACCTAGG...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACAATGATGCCTTCTTCTaGAAACCTCCTGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYNDAFF*KPPEGP
Trigger: AGGTCCTTCAGGAGGTTTCCAGAAGAAGGCATCATT...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449133.1
CDS-3UTR TCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACCAACATGTCACTGCATaGAAGATGAATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYQHVTA*KMNLWL
Trigger: CAACCAGAGATTCATCTTTCATGCAGTGACATGTTG...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR TCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACGTCCTCATAGACCAATaGGTAGCCACACGTACTTGT +
Preference number: 4 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDVLIDQ*VATRTC
Trigger: ACAAGTACGTGTGGCTACTCATTGGTCTATGAGGAC...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDLGICV*PFLSGV
Trigger: AACCCCTGATAAGAAGGGGCAGACACAGATCCCTAA...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCATCCTCATCCAGACTTaGCCTTTTGTCATCAGATGT +
Preference number: 4 (lower is better)
Translates to: KRVYRVHQDICFKESCESILIQT*PFVIRC
Trigger: ACATCTGATGACAAAAGGGCAAGTCTGGATGAGGAT...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ACTGGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCACCTCCCCACACAAACTaGCGAATCTTAAACAACACT +
Preference number: 4 (lower is better)
Translates to: TGILHNRLQETGIYHRKPPPHTN*RILNNT
Trigger: AGTGTTGTTTAAGATTCGGCAGTTTGTGTGGGGAGG...TGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCTCATTCCTAAACTACTaGCTCAAGCCAGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDISFLNY*LKPGGR
Trigger: GCGCCCGCCTGGCTTGAGGCAGTAGTTTAGGAATGA...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCACACACACAGGCTCTaGATTCAGACCCAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDHTHRL*IQTQEN
Trigger: ATTCTCTTGGGTCTGAATCCAGAGCCTGTGTGTGTG...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATTTCTTATCAGGGGTTTaGTACCGTCCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDFLSGV*YRPRRS
Trigger: GGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAA...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCAAGTACAGGCTGTCCTaGCCAAAAACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIKYRLS*PKTQLL
Trigger: CAGAAGCTGAGTTTTTGGCCAGGACAGCCTGTACTT...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCCTGCTGGCGCATGGTaGAAATTTCAGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDPAGAW*KFQGNS
Trigger: ACTGTTGCCCTGAAATTTTCACCATGCGCCAGCAGG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR TCA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATAACTTGTATTCCAGTTaGCCCAGGTCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNNLYSS*PRSSRR
Trigger: TCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTT...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACATACATAGTGATTCCTaGACCGGAAGAATGAACCCC +
Preference number: 4 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDIHSDS*TGRMNP
Trigger: GGGGTTCATTCTTCCGGTTCAGGAATCACTATGTAT...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACACCGTGGAATGTATGTaGGCTAAAGACAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDTVECM*AKDRIS
Trigger: TGAGATCCTGTCTTTAGCTCACATACATTCCACGGT...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTAAAATCTTGGTGACTTaGTGTACCGTGAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GILHNRLQETGIYHRKPSKILVT*CTVKRH
Trigger: GTGCCTTTTCACGGTACAGCAAGTCACCAAGATTTT...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCAGAGGGCTGAGAGAGTaGCTCCCAGATCTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIRGLRE*LPDLVN
Trigger: GTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCAGAGTGCCGCTGCCTaGTTACTCAGCACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDQSAAA*LLSTAK
Trigger: TTTAGCAGTGCTGAGTAAGCAGGCAGCGGCACTCTG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTGTTCACCAAGACATCTaGTTCAAAGAGAGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GILHNRLQETGIYHRKPSVHQDI*FKESCE
Trigger: TTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAAC...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTAAGAATTACTACTGTTTaGCGTTTGCTGAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLRITTV*RLLKEV
Trigger: TACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCT...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTATTCACACAGAACATaGTGCTACAATTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCYSHRT*CYNWEA
Trigger: TGCTTCCCAATTGTAGCACCATGTTCTGTGTGAATA...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGTTTTGCTTCACTGTCTaGTTTTACAAAGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PLGNKPLQNRSMFCYVPGFCFTV*FYKAFL
Trigger: CAAGAAAGCTTTGTAAAACCAGACAGTGAAGCAAAA...CCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTCCCATCCTGAAGTATaGATACTGAAACTTGTATTC +
Preference number: 4 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCSHPEV*ILKLVF
Trigger: GAATACAAGTTTCAGTATGCATACTTCAGGATGGGA...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCTTGGTTAGTGAATACTaGAAGTACTCACTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCLVSEY*KYSLFT
Trigger: TGTAAAGAGTGAGTACTTGCAGTATTCACTAACCAA...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATTTCCTGTTTCCTGTTTaGTTTGATCTGTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDFLFPV*FDLSAS
Trigger: AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAA...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATAACTTGTATTCCAGTTaGCCCAGGTCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDNLYSS*PRSSRR
Trigger: TCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR TCA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCAAAAACTCAGCTTCTaGAACTCTGAGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: TTDQTCISCFLFGLICLPQKLSF*NSENVL
Trigger: AAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTG...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR TCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATATATTTAGAAAGTGTTaGAGACCGCCGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDIFRKC*RPPLES
Trigger: ACTTTCTAGCGGCGGTCTTCAACACTTTCTAAATAT...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCACAGAGGGGCAACTGTaGAAAATCTTGGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDITEGQL*KILVTC
Trigger: GCAAGTCACCAAGATTTTGCACAGTTGCCCCTCTGT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCTCCCATCCTGAAGTATaGATACTGAAACTTGTATTC +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFSHPEV*ILKLVF
Trigger: GAATACAAGTTTCAGTATGCATACTTCAGGATGGGA...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCTTTACAATGTCTGGATaGTTAATTCCCATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFFTMSG*LIPILK
Trigger: CTTCAGGATGGGAATTAAGCATCCAGACATTGTAAA...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDILGICV*PFLSGV
Trigger: AACCCCTGATAAGAAGGGGCAGACACAGATCCCTAA...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCGGCCTTAAGAAGCCATaGAAAATTAACCAGTACATC +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIGLKKP*KINQYI
Trigger: GATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCC...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATTTCTTCACAATCGTTTaGAAGAGACTGGGATATACC +
Preference number: 4 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDFFTIV*KRLGYT
Trigger: GGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAA...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCAAGTACAGGCTGTCCTaGCCAAAAACTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIKYRLS*PKTQLL
Trigger: CAGAAGCTGAGTTTTTGGCCAGGACAGCCTGTACTT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CCA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATCCTAGGTTAAGCAGTTaGCAACATTTTGCTTCACTG +
Preference number: 4 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNPRLSS*QHFASL
Trigger: CAGTGAAGCAAAATGTTGCCAACTGCTTAACCTAGG...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 72 bp CGAATCTTAAACAACACTGGCATTCTTCACAATCGTTaGCAAGAGACTGGGATATACCATAGAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: RILNNTGILHNR*QETGIYHRKPS
Trigger: AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCCAGTGTTGTTTAAGATTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATAATGAAAAGCTTCCTTaGTATCTCTGGGCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDNEKLP*YLWALS
Trigger: CGAAAGGGCCCAGAGATATCAAGGAAGCTTTTCATT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATACATAGTGATTCCTaGACCGGAAGAATGAACCCC +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDIHSDS*TGRMNP
Trigger: GGGGTTCATTCTTCCGGTTCAGGAATCACTATGTAT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATGTGTCGTTAATGTCCTaGTGGCGCATGGTGAAAATT +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDVSLMS*WRMVKI
Trigger: AATTTTCACCATGCGCCAGCAGGACATTAACGACAC...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTTTACAATGTCTGGATaGTTAATTCCCATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIFTMSG*LIPILK
Trigger: CTTCAGGATGGGAATTAAGCATCCAGACATTGTAAA...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp GGCATTCTTCACAATCGTTTGCAAGAGACTGGGATATACCATAGAAAGCCATCTTCTTTTACTCTGCTGTaGACTGAATACCATTATGAA +
Preference number: 4 (lower is better)
Translates to: GILHNRLQETGIYHRKPSSFTLL*TEYHYE
Trigger: TTCATAATGGTATTCAGTGCACAGCAGAGTAAAAGA...AGATGGCTTTCTATGGTATATCCCAGTCTCTTGCAAACGATTGTGAAGAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCCTTGGAAGTGACCACTaGCCAAGAGCTGACATAAAA +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDILGSDH*PRADIK
Trigger: TTTTATGTCAGCTCTTGGCCAGTGGTCACTTCCAAG...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CCA 90 bp TGCAAGAGACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCTTTTGCTTCACTGTCTaGTTTTACAAAGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: CKRLGYTIESHLQPVTSFFCFTV*FYKAFL
Trigger: CAAGAAAGCTTTGTAAAACCAGACAGTGAAGCAAAA...GAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGTCTCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
3UTR CAA 72 bp CTGTTCTTCACAAAGATAAAGAAAACTGCCAGCATTTaGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: LFFTKIKKTASI*LALRSHAKLTS
Trigger: ACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTTGTGAAGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCAAAATCTTGGTGACTTaGTGTACCGTGAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIKILVT*CTVKRH
Trigger: GTGCCTTTTCACGGTACAGCAAGTCACCAAGATTTT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCCTCATCCAGACTTaGCCTTTTGTCATCAGATGT +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDILIQT*PFVIRC
Trigger: ACATCTGATGACAAAAGGGCAAGTCTGGATGAGGAT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCATCCTCATCCAGACTTaGCCTTTTGTCATCAGATGT +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIILIQT*PFVIRC
Trigger: ACATCTGATGACAAAAGGGCAAGTCTGGATGAGGAT...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTACAACAGATCAAACATaGATTTCCTGTTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASTTDQT*ISCFLF
Trigger: AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR GCA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTTTATCAACATGTCACTaGATGAAAGATGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASLSTCH*MKDESL
Trigger: CAGAGATTCATCTTTCATGCAGTGACATGTTGATAA...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR TCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATCAAAAACTCAGCTTCTaGAACTCTGAGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDQKLSF*NSENVL
Trigger: AAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTG...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR TCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCCAAAAACTCAGCTTCTaGAACTCTGAGAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIQKLSF*NSENVL
Trigger: AAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTG...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATTCCCATCCTGAAGTATaGATACTGAAACTTGTATTC +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDSHPEV*ILKLVF
Trigger: GAATACAAGTTTCAGTATGCATACTTCAGGATGGGA...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCTCCCATCCTGAAGTATaGATACTGAAACTTGTATTC +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDISHPEV*ILKLVF
Trigger: GAATACAAGTTTCAGTATGCATACTTCAGGATGGGA...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCTTTACAATGTCTGGATaGTTAATTCCCATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIFTMSG*LIPILK
Trigger: CTTCAGGATGGGAATTAAGCATCCAGACATTGTAAA...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR GCA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATTTGGTTAGTGAATACTaGAAGTACTCACTCTTTACA +
Preference number: 4 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDLVSEY*KYSLFT
Trigger: TGTAAAGAGTGAGTACTTGCAGTATTCACTAACCAA...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS TCA 90 bp TCCTCCGCCACTGTCCTGGCAAGATCTTCCCGGTGGCAGCAAGGCTaGTGGGCCCAGGTGCCTTGGGCCCTTCCCACCGGGTTTACTGGG +
Preference number: 5 (lower is better)
Translates to: SSATVLARSSRWQQG*WAQVPWALPTGFTG
Trigger: CCCAGTAAACCCGGTGGGAAGGGCCCAAGGCACCTGGGCCCATCAGCCTTGCTGCCACCGGGAAGATCTTGCCAGGACAGTGGCGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 90 bp CGGCGCAGCTCGAGAACATGGAGGAAGCCCCCAAGCGGGTCAGCCTaGCCCTCCAGCTCCCTGAACACGGCAGCAAGGACATCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: RRSSRTWRKPPSGSA*PSSSLNTAARTSEV
Trigger: CACTTCCGATGTCCTTGCTGCCGTGTTCAGGGAGCTGGAGGGCCAGGCTGACCCGCTTGGGGGCTTCCTCCATGTTCTCGAGCTGCGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 90 bp ACCCGCCACTCCGAGTGTGGTCCGGCAAATCCTCCGCCACTGTCCTaGCAAGATCTTCCCGGTGGCAGCAAGGCTGATGGGCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: TRHSECGPANPPPLS*QDLPGGSKADGPRC
Trigger: GCACCTGGGCCCATCAGCCTTGCTGCCACCGGGAAGATCTTGCCAGGACAGTGGCGGAGGATTTGCCGGACCACACTCGGAGTGGCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 90 bp TCCTGGCAAGATCTTCCCGGTGGCAGCAAGGCTGATGGGCCCAGGTaGCTTGGGCCCTTCCCACCGGGTTTACTGGGTGAGTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SWQDLPGGSKADGPR*LGPFPPGLLGECRS
Trigger: AGAGCGGCACTCACCCAGTAAACCCGGTGGGAAGGGCCCAAGGCACCTGGGCCCATCAGCCTTGCTGCCACCGGGAAGATCTTGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 90 bp AGGACCATCCCGGGTGCAAAGCAGCTGCGCCGTGTGGTCACCGCCTaGCTTCTCCTAGAACCCACAGCCTCGGCGCAGCTCGAGAACATG +
Preference number: 5 (lower is better)
Translates to: RTIPGAKQLRRVVTA*LLLEPTASAQLENM
Trigger: CATGTTCTCGAGCTGCGCCGAGGCTGTGGGTTCTAGGAGAAGCCAGGCGGTGACCACACGGCGCAGCTGCTTTGCACCCGGGATGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 90 bp GAGGCCAGCACGTCCCTGCAGGGCACCAAGCATCTGCTGAGCACCTaGAGTAAGAGTTCCCAGACGCTCACGAGGCAGTTCCCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: EASTSLQGTKHLLST*SKSSQTLTRQFPFG
Trigger: CCCGAAGGGGAACTGCCTCGTGAGCGTCTGGGAACTCTTACTGCAGGTGCTCAGCAGATGCTTGGTGCCCTGCAGGGACGTGCTGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACGATGTCCAGCAACTGTaGAAGACTGGCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYDVQQL*KTGTSP
Trigger: CGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACATC...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp GTTATGCAGGACCTGAACTGTCTCCTAGTCCGGGGCTCTGCCTCGTaGGGATCGAGGCCAGCACGTCCCTGCAGGGCACCAAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: VMQDLNCLLVRGSAS*GSRPARPCRAPSIC
Trigger: GCAGATGCTTGGTGCCCTGCAGGGACGTGCTGGCCTCGATCCTCACGAGGCAGAGCCCCGGACTAGGAGACAGTTCAGGTCCTGCATAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 90 bp CACTCAGGTTATGCAGGACCTGAACTGTCTCCTAGTCCGGGGCTCTaGCTCGTGAGGATCGAGGCCAGCACGTCCCTGCAGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: HSGYAGPELSPSPGL*LVRIEASTSLQGTK
Trigger: CTTGGTGCCCTGCAGGGACGTGCTGGCCTCGATCCTCACGAGGCAGAGCCCCGGACTAGGAGACAGTTCAGGTCCTGCATAACCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 90 bp TGGCCCATGCGGTCTGGGCGGCTGCGGCTTATTCACACCTACTATTaGGCACAGAGTCCACTGAGTGAACTGACCGGCTCTTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: WPMRSGRLRLIHTYY*AQSPLSELTGSSPL
Trigger: GAGGGGAGAAGAGCCGGTCAGTTCACTCAGTGGACTCTGTGCTCAATAGTAGGTGTGAATAAGCCGCAGCCGCCCAGACCGCATGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS CCA 90 bp ATTCAAGATGACCCCCGGGCTGGCCCTGAGGTCACCACGGTCATGTaGTGTTTGCCAGCACGAGATGCTCATGCCCTGGTGGGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: IQDDPRAGPEVTTVM*CLPARDAHALVGAK
Trigger: TTTTGCACCCACCAGGGCATGAGCATCTCGTGCTGGCAAACACCACATGACCGTGGTGACCTCAGGGCCAGCCCGGGGGTCATCTTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp CTGGGGAGCAGGCCCATGCCGTGTCCTGCATGTAGCCCACAGGGTGATGGGGCAAACATGGTGCTACAATaGGGAAGCACAGGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: LGSRPMPCPACSPQGDGANMVLQ*GSTGCY
Trigger: GTAACACCCTGTGCTTCCCAATTGTAGCACCATGTT...TGCCCCATCACCCTGTGGGCTACATGCAGGACACGGCATGGGCCTGCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS GCA 90 bp ATGACCCCCGGGCTGGCCCTGAGGTCACCACGGTCATGTGGTGTTTaGCAGCACGAGATGCTCATGCCCTGGTGGGTGCAAAATGATTTT +
Preference number: 5 (lower is better)
Translates to: MTPGLALRSPRSCGV*QHEMLMPWWVQNDF
Trigger: AAAATCATTTTGCACCCACCAGGGCATGAGCATCTCGTGCTGGCAAACACCACATGACCGTGGTGACCTCAGGGCCAGCCCGGGGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACGGAGCGCTTCCTCATTaGCATAATAGGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYGALPH*HNRQFQ
Trigger: TTGAAACTGCCTATTATGCAAATGAGGAAGCGCTCC...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS GCA 90 bp CTTGCCCCCAGCTTCTCAAGGACATGTGTACACATCAAGGGCACCTaGGGTGGGGTGTGTTTGCAAGTGGCGGTTTCGCTGAACCCTAAG +
Preference number: 5 (lower is better)
Translates to: LAPSFSRTCVHIKGT*GGVCLQVAVSLNPK
Trigger: CTTAGGGTTCAGCGAAACCGCCACTTGCAAACACACCCCACCGCAGGTGCCCTTGATGTGTACACATGTCCTTGAGAAGCTGGGGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGCATCCTCATCCAGACTaGCCCTTTTGTCATCAGATG +
Preference number: 5 (lower is better)
Translates to: PGQHSLALQTTGPETPGLHPHPD*PFCHQM
Trigger: CATCTGATGACAAAAGGGCAAGTCTGGATGAGGATG...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp GATATGAAGTGCCCGAGGGTGCGGTTGAGATCCCTGCATAAGAAGTaGTGCAGTTGGGGGCGAGGGCATGAGGAAGGTCAGTACAGACTG +
Preference number: 5 (lower is better)
Translates to: DMKCPRVRLRSLHKK*CSWGRGHEEGQYRL
Trigger: CAGTCTGTACTGACCTTCCTCATGCCCTCGCCCCCAACTGCATCACTTCTTATGCAGGGATCTCAACCGCACCCTCGGGCACTTCATATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGATGTCCAGCAACTGTaGAAGACTGGCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKDVQQL*KTGTSP
Trigger: CGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACATC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp GGGCTCCAGGAGAGGGCTGAGAGAGTGCCTCCCAGATCTTGTGAACGGCATTCTAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCG +
Preference number: 5 (lower is better)
Translates to: GLQERAERVPPRSCERHSKRHFS*RSLTVS
Trigger: CGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTT...AGAATGCCGTTCACAAGATCTGGGAGGCACTCTCTCAGCCCTCTCCTGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CCAGGCCAGCACAGTCTGGCACTACAGACTACAGGGCCGGAGACACCAGGCTTGGCGCAGGACTGGCAGTaGCACAATAATAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: PGQHSLALQTTGPETPGLAQDWQ*HNNKLV
Trigger: GACTAATTTATTATTGTGCAACTGCCAGTCCTGCGC...CAAGCCTGGTGTCTCCGGCCCTGTAGTCTGTAGTGCCAGACTGTGCTGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GAGCCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAAACAGGTCTATGTTTaGTTACGTGCCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EPSQFIFLVAQMSEAPLGKQVYV*LRAWAG
Trigger: CCCTGCCCAGGCACGTAACAAAACATAGACCTGTTT...ACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
CDS TCA 90 bp AGTTTGCGCAACAAAGAAGCTGTCGTCCTTCTCTGTTCTCCAAGATaGGGAGTCTGCCTAGCCATACAGGCCCAGGTGAGGGGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SLRNKEAVVLLCSPR*GVCLAIQAQVRGIR
Trigger: CCTGATCCCCCTCACCTGGGCCTGTATGGCTAGGCAGACTCCTCATCTTGGAGAACAGAGAAGGACGACAGCTTCTTTGTTGCGCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS GCA 90 bp GAAACTCTGAGAATGTCCTTGAGCAATGGGTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTTTGGTACCGTCCCAGGCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ETLRMSLSNGLGICV*PFLSGVWYRPRRSR
Trigger: CCTGGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAAGGGGCAGACACAGATCCCTAACCCATTGCTCAAGGACATTCTCAGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS CCA 90 bp CTCTACCTTTCTCCTGGTTCTAATCCTTTGGGGCTGTGTCCTCTATaGACAGCTCTCCTAGCACCCGGTGACCTGTTCTCCCCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LYLSPGSNPLGLCPL*TALLAPGDLFSPES
Trigger: TGACTCAGGGGAGAACAGGTCACCGGGTGCTAGGAGAGCTGTCCATAGAGGACACAGCCCCAAAGGATTAGAACCAGGAGAAAGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGGATGTCCAGCAACTGTaGAAGACTGGCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: SDHWPRADIKANFPKQEGDVQQL*KTGTSP
Trigger: CGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACATC...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CCAGGCGGTCTACTCGCCCAGATAGGCAGCCCCTGGGCAGCCACGTTCTGCTACCCAATTGTTGATATATaGAGTCCCCTTGATGTGAAT +
Preference number: 5 (lower is better)
Translates to: PGGLLAQIGSPWAATFCYPIVDI*SPLDVN
Trigger: ATTCACATCAAGGGGACTCAATATATCAACAATTGG...GTAGCAGAACGTGGCTGCCCAGGGGCTGCCTATCTGGGCGAGTAGACCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp GCAGTTCCCCTTCGGGCAGCACCAATACATGTGTGTTCCTCACCCTaGGTCAGACTCTACCTTTCTCCTGGTTCTAATCCTTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AVPLRAAPIHVCSSP*VRLYLSPGSNPLGL
Trigger: CAGCCCCAAAGGATTAGAACCAGGAGAAAGGTAGAGTCTGACTCAGGGTGAGGAACACACATGTATTGGTGCTGCCCGAAGGGGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAATCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQSKPKL*QVTGAL
Trigger: AAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGA...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCAATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: QFIFLVAQMSEAPLGNKPMSEAP*GNKPLQ
Trigger: TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT...TGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGCCACACGTACTTGTTaGGCATTACCAAGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKATRTC*ALPSVR
Trigger: CCGGACACTTGGTAATGCCAAACAAGTACGTGTGGC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp CCTGTGAGCACCAGGAGGACTGGTTTGTGCATCCGACGCAGAGAGTaGAGGATTCTCTTAATTCAGGTGTGGCCCATTCAGAGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PVSTRRTGLCIRRRE*RILLIQVWPIQSED
Trigger: GTCTTCACTCTGAATGGGCCACACCTGAATTAAGAGAATCCTTCACTCTCTGCGTCGGATGCACAAACCAGTCCTCCTGGTGCTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 90 bp GGAACTCCCCAACAGAGCCTAGTCACCAGTTTAATGAACACGCTCTaGGCAAAAACTCCTCAGGCAGAGGAGGGAGGGAAATGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GTPQQSLVTSLMNTL*AKTPQAEEGGKCSK
Trigger: CTTGCTGCATTTCCCTCCCTCCTCTGCCTGAGGAGTTTTTGCTCAGAGCGTGTTCATTAAACTGGTGACTAGGCTCTGTTGGGGAGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 90 bp TCGCCATTCCCCGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTaGAGTATGCAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SPFPGISEAVSQPRF*SMQKPVLRLQSQRK
Trigger: CTTTCTCTGGCTTTGGAGTCTAAGAACAGGTTTCTGCATACTGCAGAAGCGTGGCTGACTGACAGCCTCACTGATTCCGGGGAATGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS-3UTR CAA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGAGGCTGTAGTCAGTTaGCGCAACAAAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKEAVVS*RNKEAV
Trigger: GACAGCTTCTTTGTTGCGCAAACTGACTACAGCCTC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGTCAATGACCCCTCCATaGGAGGCTGTAGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMSMTPP*EAVVSL
Trigger: CAAACTGACTACAGCCTCCAATGGAGGGGTCATTGA...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAAACAGGTCTATGTTTaGTTACGTGCCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQKQVYV*LRAWAG
Trigger: CCCTGCCCAGGCACGTAACAAAACATAGACCTGTTT...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGGCCAGGTTTCTAGCCTaGTCATTCCTAAACTACTGC +
Preference number: 5 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRARFLA*SFLNYC
Trigger: GCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS CCA 90 bp CCGGCTCTTCTCCCCTCTCTGTGCAGAGAACATGTAGGTTGTGTTTaGTATGAGCAGTGCTGCAGTGGATGTTCCTGTACAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PALLPSLCREHVGCV*YEQCCSGCSCTGFP
Trigger: TGGAAAACCTGTACAGGAACATCCACTGCAGCACTGCTCATACCAAACACAACCTACATGTTCTCTGCACAGAGAGGGGAGAAGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS-3UTR CAA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGGGAGCGCTTCCTCATTaGCATAATAGGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRGALPH*HNRQFQ
Trigger: TTGAAACTGCCTATTATGCAAATGAGGAAGCGCTCC...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCG +
Preference number: 5 (lower is better)
Translates to: SDHWPRADIKANFPKQEGKRHFS*RSLTVS
Trigger: CGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTT...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCAACTGTGCAAAATCTaGGTGACTTGCTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMQLCKI*VTCCTV
Trigger: CACGGTACAGCAAGTCACCAAGATTTTGCACAGTTG...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACTGTTTCCTGTTTGGTTaGATCTGTCTGCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNCFLFG*ICLPLR
Trigger: CCTGAGAGGCAGACAGATCAAACCAAACAGGAAACA...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGTGTTTCCTGTTTGGTTaGATCTGTCTGCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMCFLFG*ICLPLR
Trigger: CCTGAGAGGCAGACAGATCAAACCAAACAGGAAACA...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp TTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGCGCGCAGGACTGGCAGTaGCACAATAATAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: FRMGQGPPHRHVTTDQTCAQDWQ*HNNKLV
Trigger: GACTAATTTATTATTGTGCAACTGCCAGTCCTGCGC...GCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGGCGCAGGACTGGCAGTaGCACAATAATAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRAQDWQ*HNNKLV
Trigger: GACTAATTTATTATTGTGCAACTGCCAGTCCTGCGC...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp AGTGACCACTGGCCAAGAGCTGACATAAAAGCCAACTTCCCCAAACAGGAAGGGGTGAACGGCATTCTGTaGGAACTAAAAGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SDHWPRADIKANFPKQEGVNGIL*ELKVGQ
Trigger: CTGCCCCACTTTTAGTTCCAACAGAATGCCGTTCAC...CCCTTCCTGTTTGGGGAAGTTGGCTTTTATGTCAGCTCTTGGCCAGTGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp CTCTCAGACTCCTCCTCCTCCCGAGCCAGGAGCTTCTTAAAAACTTaGAACTCCTCAACAGAAGTACAGGCTGTCCTGGCCAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: LSDSSSSRARSFLKT*NSSTEVQAVLAKNS
Trigger: TGAGTTTTTGGCCAGGACAGCCTGTACTTCTGTTGAGGAGTTTCAAGTTTTTAAGAAGCTCCTGGCTCGGGAGGAGGAGGAGTCTGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS TCA 90 bp ACTCCAAAGCCAGAGAAAGAATTCTCCCTTCGAGGCCCAACAAATTaGGAAGGAACTGTGATGGACCACTTCCAAAACAGAGACGGGGGC +
Preference number: 5 (lower is better)
Translates to: TPKPEKEFSLRGPTN*EGTVMDHFQNRDGG
Trigger: GCCCCCGTCTCTGTTTTGGAAGTGGTCCATCACAGTTCCTTCTCAATTTGTTGGGCCTCGAAGGGAGAATTCTTTCTCTGGCTTTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS GCA 90 bp TCCCCGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTGCAGTATaGAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAAAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: SPESVRLSVSHASAV*RNLFLDSKARERIL
Trigger: GAGAATTCTTTCTCTGGCTTTGGAGTCTAAGAACAGGTTTCTGCATACTGCAGAAGCGTGGCTGACTGACAGCCTCACTGATTCCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS-3UTR CAA 90 bp CACTGCATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCGAGGCTGTAGTCAGTTaGCGCAACAAAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: HCMKDESLVGLGQLCSSCEAVVS*RNKEAV
Trigger: GACAGCTTCTTTGTTGCGCAAACTGACTACAGCCTC...GCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCATGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGGGAGCGCTTCCTCATTaGCATAATAGGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMGALPH*HNRQFQ
Trigger: TTGAAACTGCCTATTATGCAAATGAGGAAGCGCTCC...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp TCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGGGAGCGCTTCCTCATTaGCATAATAGGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SQFIFLVAQMSEAPLGNKGALPH*HNRQFQ
Trigger: TTGAAACTGCCTATTATGCAAATGAGGAAGCGCTCC...CTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp CCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: PLGNKPLQNRSMFCYVPGSKPKL*QVTGAL
Trigger: AAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGA...CCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCCTGGGCAGGGCGATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: VTSHFKTGLCFVTCLGRAMSEAP*GNKPLQ
Trigger: TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT...CGCCCTGCCCAGGCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CAA 90 bp CTTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATTTCCCAAACTCTTTaGGCAACCAAACCCCATCCT +
Preference number: 5 (lower is better)
Translates to: LIQDGTGPSPQTRDNRSNISQTL*ATKPHP
Trigger: AGGATGGGGTTTGGTTGCCAAAAGAGTTTGGGAAAT...GTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACATGAGTAGCCACACGTACTaGTTTGGCATTACCAAGTGT +
Preference number: 5 (lower is better)
Translates to: IQDGTGPSPQTRDNRSNMSSHTY*FGITKC
Trigger: ACACTTGGTAATGCCAAACAAGTACGTGTGGCTACT...CATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp TCTTCTCCCCTCTCTGTGCAGAGAACATGTAGGTTGTGTTTGGTATaGGCAGTGCTGCAGTGGATGTTCCTGTACAGGTTTTCCAGTACG +
Preference number: 5 (lower is better)
Translates to: SSPLSVQRTCRLCLV*AVLQWMFLYRFSST
Trigger: CGTACTGGAAAACCTGTACAGGAACATCCACTGCAGCACTGCTCATACCAAACACAACCTACATGTTCTCTGCACAGAGAGGGGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS-3UTR CAA 90 bp TTAGCAGGAACTCCTTCCACTGGCAAAGGACTGCCACTGCCATCTGACTCAACTAAAACTGCCAGCATTTaGCTGGCCTTAAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LAGTPSTGKGLPLPSDSTKTASI*LALRSH
Trigger: ATGGCTTCTTAAGGCCAGCAAAATGCTGGCAGTTTT...AGTTGAGTCAGATGGCAGTGGCAGTCCTTTGCCAGTGGAAGGAGTTCCTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAACAAAAGTCTTTTTCTTaGCAGTCACGCTGTAAGACG +
Preference number: 5 (lower is better)
Translates to: IFLVAQMSEAPLGNKPLQQKSFS*QSRCKT
Trigger: CGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTTG...TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTAAAACAGGTCTATGTTTaGTTACGTGCCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLKQVYV*LRAWAG
Trigger: CCCTGCCCAGGCACGTAACAAAACATAGACCTGTTT...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CAA 90 bp CCCTCACAGTTCATCTTCCTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGAATTACTACTGTTaGGCGTTTGCTGAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: PSQFIFLVAQMSEAPLGNKNYYC*AFAERS
Trigger: ACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCTT...GTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAGGAAGATGAACTGTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CTGGTGGCGCAGATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTTAGTACCATATCCTTaGTCAGTGCTCATCAGAATG +
Preference number: 5 (lower is better)
Translates to: LVAQMSEAPLGNKPLQNRLVPYP*SVLIRM
Trigger: CATTCTGATGAGCACTGACAAAGGATATGGTACTAA...CCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCATCTGCGCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp CTCCTCAACAGAAGTACAGGCTGTCCTGGCCAAAAACTCAGCTTCTaGAACTCTGAGAATGTCCTTGAGCAATGGGTTAGGGATCTGTGT +
Preference number: 5 (lower is better)
Translates to: LLNRSTGCPGQKLSF*NSENVLEQWVRDLC
Trigger: ACACAGATCCCTAACCCATTGCTCAAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTGGCCAGGACAGCCTGTACTTCTGTTGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS-3UTR CAA 90 bp ATGAAAGATGAATCTCTGGTTGGCCTAGGACAGCTTTGCTCTTCCTGCCCCTTACATCCTCATCCAGACTaGCCCTTTTGTCATCAGATG +
Preference number: 5 (lower is better)
Translates to: MKDESLVGLGQLCSSCPLHPHPD*PFCHQM
Trigger: CATCTGATGACAAAAGGGCAAGTCTGGATGAGGATG...TAAGGGGCAGGAAGAGCAAAGCTGTCCTAGGCCAACCAGAGATTCATCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTTCCTCATCCTCATCATaGTCCTCCGCCTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: TTDQTCISCFLFGLICLPSSSSS*SSASSS
Trigger: CGACGACGAGGCGGAGGACAATGATGAGGATGAGGA...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATTCCTCATCCTCATCATaGTCCTCCGCCTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDSSSSS*SSASSS
Trigger: CGACGACGAGGCGGAGGACAATGATGAGGATGAGGA...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGCATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: RHPWVTSHFKTGLCFVTCMSEAP*GNKPLQ
Trigger: TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT...GCACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CAA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGCCACACGTACTTGTTaGGCATTACCAAGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYATRTC*ALPSVR
Trigger: CCGGACACTTGGTAATGCCAAACAAGTACGTGTGGC...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp CTCATGCCATCAGAGACAGGCCTCTATCTCAGGGATCACCCCGGCTaGCATCAAATTCCTCTTCTCTTTTCCCAACATTTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: LMPSETGLYLRDHPG*HQIPLLFSQHFKLF
Trigger: GAACAATTTGAAATGTTGGGAAAAGAGAAGAGGAATTTGATGTCAGCCGGGGTGATCCCTGAGATAGAGGCCTGTCTCTGATGGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488567.5
ENST00000496878.5
CDS-3UTR CAA 90 bp CCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: PHRHVTTDQTCISCFLFGKLVFQ*TQVLSK
Trigger: CTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTT...ACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AGGAAGGGCCTGTTCTTCACAAAGATAAAGAAAACTGCCAGCATTTTGCTGGCCACTCTGAGAATGTCCTaGAGCAATGGGTTAGGGATC +
Preference number: 5 (lower is better)
Translates to: RKGLFFTKIKKTASILLATLRMS*SNGLGI
Trigger: GATCCCTAACCCATTGCTCAAGGACATTCTCAGAGT...GGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTTGTGAAGAACAGGCCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGTGACTCTGAGAATGTCCTaGAGCAATGGGTTAGGGATC +
Preference number: 5 (lower is better)
Translates to: EAPLGNKPLQNRSMFCYVTLRMS*SNGLGI
Trigger: GATCCCTAACCCATTGCTCAAGGACATTCTCAGAGT...CACGTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CCTCCCCACAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTTGTTTCCTGTTTGGTTaGATCTGTCTGCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: PPHRHVTTDQTCISCFLFCFLFG*ICLPLR
Trigger: CCTGAGAGGCAGACAGATCAAACCAAACAGGAAACA...AAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTGTGGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCATGAGTGAGGCACCCTaGGGTAACAAGCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: KRVYRVHQDICFKESCESMSEAP*GNKPLQ
Trigger: TTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CCAATGAGTAGCCACACGTACTTGTTTGGCATTACCAAGTGTCCGGGCAAGGCCAAGAATTACTACTGTTaGGCGTTTGCTGAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: PMSSHTYLFGITKCPGKAKNYYC*AFAERS
Trigger: ACTTCTTTCAGCAAACGCCAAACAGTAGTAATTCTT...GGCCTTGCCCGGACACTTGGTAATGCCAAACAAGTACGTGTGGCTACTCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS GCA 90 bp GCCTCTCCTCATGGGCATCCACCAAAGGTGTTTGCTTCTGTGAAATaGCTGATCACGCCTTTTGACTTTATGTTGGGTTATTTGTACTCT +
Preference number: 5 (lower is better)
Translates to: ASPHGHPPKVFASVK*LITPFDFMLGYLYS
Trigger: AGAGTACAAATAACCCAACATAAAGTCAAAAGGCGTGATCAGGCATTTCACAGAAGCAAACACCTTTGGTGGATGCCCATGAGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS-3UTR CAA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: TTDQTCISCFLFGLICLPSKPKL*QVTGAL
Trigger: AAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGA...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AAAAGAGTCTACCGAGTTCACCAAGACATCTGCTTCAAAGAGAGCTGTGAAAGCAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: KRVYRVHQDICFKESCESKLVFQ*TQVLSK
Trigger: CTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTT...GCTTTCACAGCTCTCTTTGAAGCAGATGTCTTGGTGAACTCGGTAGACTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp TTATTCAGGATGGGACAGGGCCCTCCCCACAGACACGTGACAACAGATCAAACACCAATTGTTGATATATaGAGTCCCCTTGATGTGAAT +
Preference number: 5 (lower is better)
Translates to: LFRMGQGPPHRHVTTDQTPIVDI*SPLDVN
Trigger: ATTCACATCAAGGGGACTCAATATATCAACAATTGG...TGTTTGATCTGTTGTCACGTGTCTGTGGGGAGGGCCCTGTCCCATCCTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AGGAAGGGCCTGTTCTTCACAAAGATAAAGAAAACTGCCAGCATTTTGCTGGCCATTTCCCAAACTCTTTaGGCAACCAAACCCCATCCT +
Preference number: 5 (lower is better)
Translates to: RKGLFFTKIKKTASILLAISQTL*ATKPHP
Trigger: AGGATGGGGTTTGGTTGCCAAAAGAGTTTGGGAAAT...GGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTTGTGAAGAACAGGCCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp AGGAAGGGCCTGTTCTTCACAAAGATAAAGAAAACTGCCAGCATTTTGCTGGCCACTACTGTTTGGCGTTaGCTGAAAGAAGTACGTGAG +
Preference number: 5 (lower is better)
Translates to: RKGLFFTKIKKTASILLATTVWR*LKEVRE
Trigger: CTCACGTACTTCTTTCAGCAAACGCCAAACAGTAGT...GGCCAGCAAAATGCTGGCAGTTTTCTTTATCTTTGTGAAGAACAGGCCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ACTGGGATATACCATAGAAAGCCATCTACAACCTGTTACCAGTTTCATACTGACGAGGCTGTAGTCAGTTaGCGCAACAAAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TGIYHRKPSTTCYQFHTDEAVVS*RNKEAV
Trigger: GACAGCTTCTTTGTTGCGCAAACTGACTACAGCCTC...GTCAGTATGAAACTGGTAACAGGTTGTAGATGGCTTTCTATGGTATATCCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCGAGGCTGTAGTCAGTTaGCGCAACAAAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIEAVVS*RNKEAV
Trigger: GACAGCTTCTTTGTTGCGCAAACTGACTACAGCCTC...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATGATGTCCAGCAACTGTaGAAGACTGGCACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDDVQQL*KTGTSP
Trigger: CGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACATC...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCG +
Preference number: 5 (lower is better)
Translates to: QTRDNRSNMHFLFPVWFDKRHFS*RSLTVS
Trigger: CGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTT...ATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTCCAGACTTGCCCTTTaGTCATCAGATGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RHVTTDQTCISCFLFGLISRLAL*SSDVLL
Trigger: GAGCAGCACATCTGATGACAAAAGGGCAAGTCTGGA...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTTCCAGACTTGCCCTTTaGTCATCAGATGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASSRLAL*SSDVLL
Trigger: GAGCAGCACATCTGATGACAAAAGGGCAAGTCTGGA...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATTCCTCATCCTCATCATaGTCCTCCGCCTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDSSSSS*SSASSS
Trigger: CGACGACGAGGCGGAGGACAATGATGAGGATGAGGA...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACGCGCAGGACTGGCAGTaGCACAATAATAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYAQDWQ*HNNKLV
Trigger: GACTAATTTATTATTGTGCAACTGCCAGTCCTGCGC...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000449133.1
ENST00000614476.4
CDS-3UTR CAA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCAAACAGGTCTATGTTTaGTTACGTGCCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIKQVYV*LRAWAG
Trigger: CCCTGCCCAGGCACGTAACAAAACATAGACCTGTTT...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS GCA 90 bp AAGAACCCAACCTATAAACTTGGATGTGAACGATACCTTCTATCTTaGCATCATACTCCCTGTTCTCTCCCCTCAGTTAACCATGATCCT +
Preference number: 5 (lower is better)
Translates to: KNPTYKLGCERYLLS*HHTPCSLPSVNHDP
Trigger: AGGATCATGGTTAACTGAGGGGAGAGAACAGGGAGTATGATGGCAAGATAGAAGGTATCGTTCACATCCAAGTTTATAGGTTGGGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS-3UTR CAA 90 bp AGACACGTGACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCCAACTGTGCAAAATCTaGGTGACTTGCTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: RHVTTDQTCISCFLFGLIQLCKI*VTCCTV
Trigger: CACGGTACAGCAAGTCACCAAGATTTTGCACAGTTG...GATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGTCACGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATTCCAGACTTGCCCTTTaGTCATCAGATGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNSRLAL*SSDVLL
Trigger: GAGCAGCACATCTGATGACAAAAGGGCAAGTCTGGA...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp AACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTCTCATCCTCATCCAGACTaGCCCTTTTGTCATCAGATG +
Preference number: 5 (lower is better)
Translates to: NRSNMHFLFPVWFDLSASHPHPD*PFCHQM
Trigger: CATCTGATGACAAAAGGGCAAGTCTGGATGAGGATG...AGAGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000614476.4
CDS-3UTR CAA 90 bp AGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTACCAAAAGTCTTTTTCTTaGCAGTCACGCTGTAAGACG +
Preference number: 5 (lower is better)
Translates to: SEAPLGNKPLQNRSMFCYQKSFS*QSRCKT
Trigger: CGTCTTACAGCGTGACTGCAAAGAAAAAGACTTTTG...GTAACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATGTGAACGGCATTCTGTaGGAACTAAAAGTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNVNGIL*ELKVGQ
Trigger: CTGCCCCACTTTTAGTTCCAACAGAATGCCGTTCAC...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTAACATGGTGCTACAATaGGGAAGCACAGGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: TTDQTCISCFLFGLICLPNMVLQ*GSTGCY
Trigger: GTAACACCCTGTGCTTCCCAATTGTAGCACCATGTT...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 90 bp TTCAGACCCAAGAGAATAAATTCTGAAATGATGTCCAGCAACTGTTaGAGACTGGCACCTCGCCGTACACTGAGCAATTCATTAATATGG +
Preference number: 5 (lower is better)
Translates to: FRPKRINSEMMSSNC*RLAPRRTLSNSLIW
Trigger: CCATATTAATGAATTGCTCAGTGTACGGCGAGGTGCCAGTCTTCAACAGTTGCTGGACATCATTTCAGAATTTATTCTCTTGGGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATCAACTGTGCAAAATCTaGGTGACTTGCTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNQLCKI*VTCCTV
Trigger: CACGGTACAGCAAGTCACCAAGATTTTGCACAGTTG...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp CAGCATTTTGCTGGCCTTAAGAAGCCATGCAAAATTAACCAGTACATCATGAATGCCAGGTTTCTAGCCTaGTCATTCCTAAACTACTGC +
Preference number: 5 (lower is better)
Translates to: QHFAGLKKPCKINQYIMNARFLA*SFLNYC
Trigger: GCAGTAGTTTAGGAATGACAAGGCTAGAAACCTGGC...ATTCATGATGTACTGGTTAATTTTGCATGGCTTCTTAAGGCCAGCAAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ACAACAGATCAAACATGCATTTCCTGTTTCCTGTTTGGTTTGATCTGTCTGCCTAGTAGCCACACGTACTaGTTTGGCATTACCAAGTGT +
Preference number: 5 (lower is better)
Translates to: TTDQTCISCFLFGLICLPSSHTY*FGITKC
Trigger: ACACTTGGTAATGCCAAACAAGTACGTGTGGCTACT...AGGCAGACAGATCAAACCAAACAGGAAACAGGAAATGCATGTTTGATCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp ATGAGTGAGGCACCCTTGGGTAACAAGCCACTTCAAAACAGGTCTATGTTTTGTTTAGTACCATATCCTTaGTCAGTGCTCATCAGAATG +
Preference number: 5 (lower is better)
Translates to: MSEAPLGNKPLQNRSMFCLVPYP*SVLIRM
Trigger: CATTCTGATGAGCACTGACAAAGGATATGGTACTAA...ACAAAACATAGACCTGTTTTGAAGTGGCTTGTTACCCAAGGGTGCCTCACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCG +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDKRHFS*RSLTVS
Trigger: CGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCTCCAGACTTGCCCTTTaGTCATCAGATGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDISRLAL*SSDVLL
Trigger: GAGCAGCACATCTGATGACAAAAGGGCAAGTCTGGA...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCCAACTGTGCAAAATCTaGGTGACTTGCTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIQLCKI*VTCCTV
Trigger: CACGGTACAGCAAGTCACCAAGATTTTGCACAGTTG...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDKLVFQ*TQVLSK
Trigger: CTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATACTCTGAGAATGTCCTaGAGCAATGGGTTAGGGATC +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDTLRMS*SNGLGI
Trigger: GATCCCTAACCCATTGCTCAAGGACATTCTCAGAGT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATCCATCCTCATCCAGACTaGCCCTTTTGTCATCAGATG +
Preference number: 5 (lower is better)
Translates to: DSSKGPKSFKRMKSFLDIHPHPD*PFCHQM
Trigger: CATCTGATGACAAAAGGGCAAGTCTGGATGAGGATG...GATATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATAAAACTGCCAGCATTTaGCTGGCCTTAAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDKTASI*LALRSH
Trigger: ATGGCTTCTTAAGGCCAGCAAAATGCTGGCAGTTTT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATACTACTGTTTGGCGTTaGCTGAAAGAAGTACGTGAG +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDTTVWR*LKEVRE
Trigger: CTCACGTACTTCTTTCAGCAAACGCCAAACAGTAGT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS-3UTR CAA 90 bp GAAGATTCAAGTAAAGGACCCAAAAGCTTTAAGAGAATGAAAAGCTTCCTTGATATTCTTCACAATCGTTaGCAAGAGACTGGGATATAC +
Preference number: 5 (lower is better)
Translates to: EDSSKGPKSFKRMKSFLDILHNR*QETGIY
Trigger: GTATATCCCAGTCTCTTGCAAACGATTGTGAAGAAT...ATCAAGGAAGCTTTTCATTCTCTTAAAGCTTTTGGGTCCTTTACTTGAATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241527.10
ENST00000614476.4
CDS TCA 72 bp ACTGTCCTGGCAAGATCTTCCCGGTGGCAGCAAGGCTaGTGGGCCCAGGTGCCTTGGGCCCTTCCCACCGGG +
Preference number: 6 (lower is better)
Translates to: TVLARSSRWQQG*WAQVPWALPTG
Trigger: CCCGGTGGGAAGGGCCCAAGGCACCTGGGCCCATCAGCCTTGCTGCCACCGGGAAGATCTTGCCAGGACAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp GACCTGAACTGTCTCCTAGTCCGGGGCTCTGCCTCGTaGGGATCGAGGCCAGCACGTCCCTGCAGGGCACCA +
Preference number: 6 (lower is better)
Translates to: DLNCLLVRGSAS*GSRPARPCRAP
Trigger: TGGTGCCCTGCAGGGACGTGCTGGCCTCGATCCTCACGAGGCAGAGCCCCGGACTAGGAGACAGTTCAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 72 bp GACCCCCGGGCTGGCCCTGAGGTCACCACGGTCATGTaGTGTTTGCCAGCACGAGATGCTCATGCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: DPRAGPEVTTVM*CLPARDAHALV
Trigger: CACCAGGGCATGAGCATCTCGTGCTGGCAAACACCACATGACCGTGGTGACCTCAGGGCCAGCCCGGGGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp CGGGCTGGCCCTGAGGTCACCACGGTCATGTGGTGTTaGCCAGCACGAGATGCTCATGCCCTGGTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: RAGPEVTTVMWC*PARDAHALVGA
Trigger: TGCACCCACCAGGGCATGAGCATCTCGTGCTGGCAAACACCACATGACCGTGGTGACCTCAGGGCCAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp GCCAGGGGGCAGGACCCACCCAAACCACCCAGAGTCTaGGCTAGAGAGACTGGCTTTGATGCTGCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: ARGQDPPKPPRV*ARETGFDAASP
Trigger: AGGGGAGGCAGCATCAAAGCCAGTCTCTCTAGCTCAGACTCTGGGTGGTTTGGGTGGGTCCTGCCCCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp TATGCAGGACCTGAACTGTCTCCTAGTCCGGGGCTCTaGCTCGTGAGGATCGAGGCCAGCACGTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: YAGPELSPSPGL*LVRIEASTSLQ
Trigger: CTGCAGGGACGTGCTGGCCTCGATCCTCACGAGGCAGAGCCCCGGACTAGGAGACAGTTCAGGTCCTGCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 72 bp TCCGAGTGTGGTCCGGCAAATCCTCCGCCACTGTCCTaGCAAGATCTTCCCGGTGGCAGCAAGGCTGATGGG +
Preference number: 6 (lower is better)
Translates to: SECGPANPPPLS*QDLPGGSKADG
Trigger: CCCATCAGCCTTGCTGCCACCGGGAAGATCTTGCCAGGACAGTGGCGGAGGATTTGCCGGACCACACTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 90 bp TCCTACAGGCAGAACGGGTGGGATGCACACCCCTGGGATCTGGGTTaGCATCTCCTGGGCACTGATGTGACTGCGCCTCTCCTCATGGGC +
Preference number: 6 (lower is better)
Translates to: SYRQNGWDAHPWDLG*HLLGTDVTAPLLMG
Trigger: GCCCATGAGGAGAGGCGCAGTCACATCAGTGCCCAGGAGATGCAAACCCAGATCCCAGGGGTGTGCATCCCACCCGTTCTGCCTGTAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS TCA 72 bp AGGCCAGCACGTCCCTGCAGGGCACCAAGCATCTGCTaGGCACCTGCAGTAAGAGTTCCCAGACGCTCACGA +
Preference number: 6 (lower is better)
Translates to: RPARPCRAPSIC*APAVRVPRRSR
Trigger: TCGTGAGCGTCTGGGAACTCTTACTGCAGGTGCTCAGCAGATGCTTGGTGCCCTGCAGGGACGTGCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp CAGGTGCCTTGGGCCCTTCCCACCGGGTTTACTGGGTaGGTGCCGCTCTGGGAATCTGCCTGTGATTCTGAC +
Preference number: 6 (lower is better)
Translates to: QVPWALPTGFTG*VPLWESACDSD
Trigger: GTCAGAATCACAGGCAGATTCCCAGAGCGGCACTCACCCAGTAAACCCGGTGGGAAGGGCCCAAGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp TCGTTAGACCTGTGTTTTCACTCCGCATTCTCGGACTaGGGTTGGCCCATGCGGTCTGGGCGGCTGCGGCTT +
Preference number: 6 (lower is better)
Translates to: SLDLCFHSAFSD*GWPMRSGRLRL
Trigger: AAGCCGCAGCCGCCCAGACCGCATGGGCCAACCTCAGTCCGAGAATGCGGAGTGAAAACACAGGTCTAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp TGCCCGAGGGTGCGGTTGAGATCCCTGCATAAGAAGTaGTGCAGTTGGGGGCGAGGGCATGAGGAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: CPRVRLRSLHKK*CSWGRGHEEGQ
Trigger: CTGACCTTCCTCATGCCCTCGCCCCCAACTGCATCACTTCTTATGCAGGGATCTCAACCGCACCCTCGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp ACGTCCCTGCAGGGCACCAAGCATCTGCTGAGCACCTaGAGTAAGAGTTCCCAGACGCTCACGAGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: TSLQGTKHLLST*SKSSQTLTRQF
Trigger: GAACTGCCTCGTGAGCGTCTGGGAACTCTTACTGCAGGTGCTCAGCAGATGCTTGGTGCCCTGCAGGGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp TGCCTTGGGCCCTTCCCACCGGGTTTACTGGGTGAGTaGCGCTCTGGGAATCTGCCTGTGATTCTGACACAG +
Preference number: 6 (lower is better)
Translates to: CLGPFPPGLLGE*RSGNLPVILTQ
Trigger: CTGTGTCAGAATCACAGGCAGATTCCCAGAGCGGCACTCACCCAGTAAACCCGGTGGGAAGGGCCCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp CTGGGCCGGATCATCCTCTCTTGTGGGACCATCCTGTaGACTGCAGGATGTTTCACAGCACCCCTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LGRIILSCGTIL*TAGCFTAPLAS
Trigger: AGAGGCCAGGGGTGCTGTGAAACATCCTGCAGTGCACAGGATGGTCCCACAAGAGAGGATGATCCGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488567.5
ENST00000496878.5
CDS TCA 72 bp CCTGAGCTTGTTTTCCTACAACCAGGAGGTGCCATCTaGCGGCCGAACGCAGCCATAGCGCGGAGAAGATGG +
Preference number: 6 (lower is better)
Translates to: PELVFLQPGGAI*RPNAAIARRRW
Trigger: CCATCTTCTCCGCGCTATGGCTGCGTTCGGCCGTCAGATGGCACCTCCTGGTTGTAGGAAAACAAGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439144.5
CDS TCA 72 bp CCTGGGATCTGGGTTTGCATCTCCTGGGCACTGATGTaGCTGCGCCTCTCCTCATGGGCATCCACCAAAGGT +
Preference number: 6 (lower is better)
Translates to: PGIWVCISWALM*LRLSSWASTKG
Trigger: ACCTTTGGTGGATGCCCATGAGGAGAGGCGCAGTCACATCAGTGCCCAGGAGATGCAAACCCAGATCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS TCA 72 bp TCTGGGAATCTGCCTGTGATTCTGACACAGAAGCCCTaGGACATGTTGGCAGGAGTGAGGCAGGCGCGACCC +
Preference number: 6 (lower is better)
Translates to: SGNLPVILTQKP*DMLAGVRQARP
Trigger: GGGTCGCGCCTGCCTCACTCCTGCCAACATGTCTCAGGGCTTCTGTGTCAGAATCACAGGCAGATTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp GTTTTCACTCCGCATTCTCGGACTGAGGTTGGCCCATaGGGTCTGGGCGGCTGCGGCTTATTCACACCTACT +
Preference number: 6 (lower is better)
Translates to: VFTPHSRTEVGP*GLGGCGLFTPT
Trigger: AGTAGGTGTGAATAAGCCGCAGCCGCCCAGACCGCATGGGCCAACCTCAGTCCGAGAATGCGGAGTGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp AGACCTGTGTTTTCACTCCGCATTCTCGGACTGAGGTaGGCCCATGCGGTCTGGGCGGCTGCGGCTTATTCA +
Preference number: 6 (lower is better)
Translates to: RPVFSLRILGLR*AHAVWAAAAYS
Trigger: TGAATAAGCCGCAGCCGCCCAGACCGCATGGGCCAACCTCAGTCCGAGAATGCGGAGTGAAAACACAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp CGGTCTGGGCGGCTGCGGCTTATTCACACCTACTATTaGGCACAGAGTCCACTGAGTGAACTGACCGGCTCT +
Preference number: 6 (lower is better)
Translates to: RSGRLRLIHTYY*AQSPLSELTGS
Trigger: AGAGCCGGTCAGTTCACTCAGTGGACTCTGTGCTCAATAGTAGGTGTGAATAAGCCGCAGCCGCCCAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS GCA 72 bp TGTGAGCTGCTGAGCGTGGTCTCACCCGCAAGGCCTTaGCCCCAGCTTCTCAAGGACATGTGTACACATCAA +
Preference number: 6 (lower is better)
Translates to: CELLSVVSPARP*PQLLKDMCTHQ
Trigger: TTGATGTGTACACATGTCCTTGAGAAGCTGGGGGCAAGGCCTTGCGGGTGAGACCACGCTCAGCAGCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 72 bp CTCAAGGACATGTGTACACATCAAGGGCACCTGCGGTaGGGTGTGTTTGCAAGTGGCGGTTTCGCTGAACCC +
Preference number: 6 (lower is better)
Translates to: LKDMCTHQGHLR*GVFASGGFAEP
Trigger: GGGTTCAGCGAAACCGCCACTTGCAAACACACCCCACCGCAGGTGCCCTTGATGTGTACACATGTCCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 90 bp GTGATCGTTAGACCTGTGTTTTCACTCCGCATTCTCGGACTGAGGTaGGCCCATGCGGTCTGGGCGGCTGCGGCTTATTCACACCTACTA +
Preference number: 6 (lower is better)
Translates to: VIVRPVFSLRILGLR*AHAVWAAAAYSHLL
Trigger: TAGTAGGTGTGAATAAGCCGCAGCCGCCCAGACCGCATGGGCCAACCTCAGTCCGAGAATGCGGAGTGAAAACACAGGTCTAACGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp AGCTTCTCAAGGACATGTGTACACATCAAGGGCACCTaGGGTGGGGTGTGTTTGCAAGTGGCGGTTTCGCTG +
Preference number: 6 (lower is better)
Translates to: SFSRTCVHIKGT*GGVCLQVAVSL
Trigger: CAGCGAAACCGCCACTTGCAAACACACCCCACCGCAGGTGCCCTTGATGTGTACACATGTCCTTGAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp TGTGTACACATCAAGGGCACCTGCGGTGGGGTGTGTTaGCAAGTGGCGGTTTCGCTGAACCCTAAGTTCACC +
Preference number: 6 (lower is better)
Translates to: CVHIKGTCGGVC*QVAVSLNPKFT
Trigger: GGTGAACTTAGGGTTCAGCGAAACCGCCACTTGCAAACACACCCCACCGCAGGTGCCCTTGATGTGTACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp TGTACCACAGGAGTCCCCTGCTTCTCAAGGAGGCACTaGACAAGATTCCTCCTGCACTCTGGTTCCTGCACA +
Preference number: 6 (lower is better)
Translates to: CTTGVPCFSRRH*TRFLLHSGSCT
Trigger: TGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAGAAGCAGGGGACTCCTGTGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS TCA 72 bp TCTCCCTTCGAGGCCCAACAAATTGAGAAGGAACTGTaGTGGACCACTTCCAAAACAGAGACGGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SPFEAQQIEKEL*WTTSKTETGAG
Trigger: CCCTGCCCCCGTCTCTGTTTTGGAAGTGGTCCATCACAGTTCCTTCTCAATTTGTTGGGCCTCGAAGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS GCA 72 bp CCCGTTGTACTTGCAGCTATGGAAGCGGATATGAAGTaGCCGAGGGTGCGGTTGAGATCCCTGCATAAGAAG +
Preference number: 6 (lower is better)
Translates to: PVVLAAMEADMK*PRVRLRSLHKK
Trigger: CTTCTTATGCAGGGATCTCAACCGCACCCTCGGGCACTTCATATCCGCTTCCATAGCTGCAAGTACAACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp GTTAGGGATCTGTGTCTGCCCCTTCTTATCAGGGGTTaGGTACCGTCCCAGGCGCTCCAGGTAAATGTGTCT +
Preference number: 6 (lower is better)
Translates to: VRDLCLPLLIRG*VPSQALQVNVS
Trigger: AGACACATTTACCTGGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAAGGGGCAGACACAGATCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS TCA 72 bp AACAAAGAAGCTGTCGTCCTTCTCTGTTCTCCAAGATaGGGAGTCTGCCTAGCCATACAGGCCCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: NKEAVVLLCSPR*GVCLAIQAQVR
Trigger: CCTCACCTGGGCCTGTATGGCTAGGCAGACTCCTCATCTTGGAGAACAGAGAAGGACGACAGCTTCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS GCA 72 bp AGAATGTCCTTGAGCAATGGGTTAGGGATCTGTGTCTaGCCCTTCTTATCAGGGGTTTGGTACCGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: RMSLSNGLGICV*PFLSGVWYRPR
Trigger: CCTGGGACGGTACCAAACCCCTGATAAGAAGGGGCAGACACAGATCCCTAACCCATTGCTCAAGGACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS GCA 72 bp CCCGGAATCAGTGAGGCTGTCAGTCAGCCACGCTTCTaGAGTATGCAGAAACCTGTTCTTAGACTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: PGISEAVSQPRF*SMQKPVLRLQS
Trigger: GCTTTGGAGTCTAAGAACAGGTTTCTGCATACTGCAGAAGCGTGGCTGACTGACAGCCTCACTGATTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS CCA 72 bp TTGCCTCTCACCTGGAAGGCCAGGTGGTCATCCTCATaGAACTCCCCAACAGAGCCTAGTCACCAGTTTAAT +
Preference number: 6 (lower is better)
Translates to: LPLTWKARWSSS*NSPTEPSHQFN
Trigger: ATTAAACTGGTGACTAGGCTCTGTTGGGGAGTTCCATGAGGATGACCACCTGGCCTTCCAGGTGAGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CCA 72 bp CCATCCTGTGCACTGCAGGATGTTTCACAGCACCCCTaGCCTCTACCCACTAGAATCCTACAATCTACCAGA +
Preference number: 6 (lower is better)
Translates to: PSCALQDVSQHP*PLPTRILQSTR
Trigger: TCTGGTAGATTGTAGGATTCTAGTGGGTAGAGGCCAGGGGTGCTGTGAAACATCCTGCAGTGCACAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488567.5
ENST00000496878.5
CDS CAA 72 bp CGCTGTAAGACGAGGCTGCTGAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAGAACAGAGGGGCAACT +
Preference number: 6 (lower is better)
Translates to: RCKTRLLKLVFQ*TQVLSKNRGAT
Trigger: AGTTGCCCCTCTGTTCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTTCAGCAGCCTCGTCTTACAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455202.6
CDS CAA 90 bp GAGCAATGGGTTAGGGATCTGTGTCTGCCCCTTCTTATCAGGGGTTaGGTACCGTCCCAGGCGCTCCAGGTAAATGTGTCTCTGCTTAAT +
Preference number: 6 (lower is better)
Translates to: EQWVRDLCLPLLIRG*VPSQALQVNVSLLN
Trigger: ATTAAGCAGAGACACATTTACCTGGAGCGCCTGGGACGGTACCAAACCCCTGATAAGAAGGGGCAGACACAGATCCCTAACCCATTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS CAA 90 bp TCAGCCCCTTTAAATACCAGGTGTTCATTTCCTAGAACTCAGAGATaGGAGGGGCGTGTGTTACCCTCCTGGGTCTCTTCAGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SAPLNTRCSFPRTQR*EGRVLPSWVSSAGE
Trigger: CTCTCCTGCTGAAGAGACCCAGGAGGGTAACACACGCCCCTCCAATCTCTGAGTTCTAGGAAATGAACACCTGGTATTTAAAGGGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS TCA 72 bp TATTCACACCTACTATTGAGCACAGAGTCCACTGAGTaGACTGACCGGCTCTTCTCCCCTCTCTGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: YSHLLLSTESTE*TDRLFSPLCAE
Trigger: CTCTGCACAGAGAGGGGAGAAGAGCCGGTCAGTTCACTCAGTGGACTCTGTGCTCAATAGTAGGTGTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS TCA 72 bp ACCAGGAGGACTGGTTTGTGCATCCGACGCAGAGAGTaGAGGATTCTCTTAATTCAGGTGTGGCCCATTCAG +
Preference number: 6 (lower is better)
Translates to: TRRTGLCIRRRE*RILLIQVWPIQ
Trigger: CTGAATGGGCCACACCTGAATTAAGAGAATCCTTCACTCTCTGCGTCGGATGCACAAACCAGTCCTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp TCACGCTGTAAGACGAGGCTGAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAGAACAGAGGGGCAACT +
Preference number: 6 (lower is better)
Translates to: SRCKTRLKLVFQ*TQVLSKNRGAT
Trigger: AGTTGCCCCTCTGTTCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTTCAGCCTCGTCTTACAGCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493169.1
CDS CAA 90 bp TGCAAAATCTTGGTGACTTGCTGTACCGTGAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCGTTAATGTCCTGCTGGCGCATGGTG +
Preference number: 6 (lower is better)
Translates to: CKILVTCCTVKRHFS*RSLTVSLMSCWRMV
Trigger: CACCATGCGCCAGCAGGACATTAACGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTTCACGGTACAGCAAGTCACCAAGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000407095.3
ENST00000414146.5
ENST00000424798.5
ENST00000439144.5
ENST00000455202.6
ENST00000460915.1
ENST00000493169.1
ENST00000614476.4
CDS CAA 90 bp GCTGTCCTGGCCAAAAACTCAGCTTCTGAAACTCTGAGAATGTCCTaGAGCAATGGGTTAGGGATCTGTGTCTGCCCCTTCTTATCAGGG +
Preference number: 6 (lower is better)
Translates to: AVLAKNSASETLRMS*SNGLGICVCPFLSG
Trigger: CCCTGATAAGAAGGGGCAGACACAGATCCCTAACCCATTGCTCAAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTGGCCAGGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS CAA 90 bp GACTCCAAAGCCAGAGAAAGAATTCTCCCTTCGAGGCCCAACAAATaGAGAAGGAACTGTGATGGACCACTTCCAAAACAGAGACGGGGG +
Preference number: 6 (lower is better)
Translates to: DSKARERILPSRPNK*RRNCDGPLPKQRRG
Trigger: CCCCCGTCTCTGTTTTGGAAGTGGTCCATCACAGTTCCTTCTCAATTTGTTGGGCCTCGAAGGGAGAATTCTTTCTCTGGCTTTGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS TCA 72 bp CAACAGAGCCTAGTCACCAGTTTAATGAACACGCTCTaGGCAAAAACTCCTCAGGCAGAGGAGGGAGGGAAA +
Preference number: 6 (lower is better)
Translates to: QQSLVTSLMNTL*AKTPQAEEGGK
Trigger: TTTCCCTCCCTCCTCTGCCTGAGGAGTTTTTGCTCAGAGCGTGTTCATTAAACTGGTGACTAGGCTCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS GCA 72 bp TCAGTGAGGCTGTCAGTCAGCCACGCTTCTGCAGTATaGAGAAACCTGTTCTTAGACTCCAAAGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SVRLSVSHASAV*RNLFLDSKARE
Trigger: TTCTCTGGCTTTGGAGTCTAAGAACAGGTTTCTGCATACTGCAGAAGCGTGGCTGACTGACAGCCTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS CCA 72 bp CTCCCCTCTCTGTGCAGAGAACATGTAGGTTGTGTTTaGTATGAGCAGTGCTGCAGTGGATGTTCCTGTACA +
Preference number: 6 (lower is better)
Translates to: LPSLCREHVGCV*YEQCCSGCSCT
Trigger: TGTACAGGAACATCCACTGCAGCACTGCTCATACCAAACACAACCTACATGTTCTCTGCACAGAGAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS CAA 72 bp TCCTCAATGACCCCTCCATTGGAGGCTGTAGTCAGTTaGCGCAACAAAGAAGCTGTCGTCCTTCTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SSMTPPLEAVVS*RNKEAVVLLCS
Trigger: AGAACAGAGAAGGACGACAGCTTCTTTGTTGCGCAAACTGACTACAGCCTCCAATGGAGGGGTCATTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS CAA 72 bp TTGGTGACTTGCTGTACCGTGAAAAGGCACTTCTCCTaGAGAAGCCTGACAGTGTCGTTAATGTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LVTCCTVKRHFS*RSLTVSLMSCW
Trigger: CCAGCAGGACATTAACGACACTGTCAGGCTTCTCAAGGAGAAGTGCCTTTTCACGGTACAGCAAGTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000407095.3
ENST00000414146.5
ENST00000424798.5
ENST00000439144.5
ENST00000455202.6
ENST00000460915.1
ENST00000493169.1
ENST00000614476.4
CDS CAA 72 bp GCTGTAAGACGAGGCTGCTTCTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTTCCTCATTTGCATAAT +
Preference number: 6 (lower is better)
Translates to: AVRRGCFSKPKL*QVTGALPHLHN
Trigger: ATTATGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGAGAAGCAGCCTCGTCTTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401626.6
CDS CAA 72 bp ATTTCCCATAATGTAGAATCACTGGGAGCCCTGAGCTaGTTTTCCTACAACCAGGAGGTGCCATCTGACGGC +
Preference number: 6 (lower is better)
Translates to: ISHNVESLGALS*FSYNQEVPSDG
Trigger: GCCGTCAGATGGCACCTCCTGGTTGTAGGAAAACAAGCTCAGGGCTCCCAGTGATTCTACATTATGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439144.5
CDS TCA 72 bp TCAGAGACAGGCCTCTATCTCAGGGATCACCCCGGCTaGCATCAAATTCCTCTTCTCTTTTCCCAACATTTC +
Preference number: 6 (lower is better)
Translates to: SETGLYLRDHPG*HQIPLLFSQHF
Trigger: GAAATGTTGGGAAAAGAGAAGAGGAATTTGATGTCAGCCGGGGTGATCCCTGAGATAGAGGCCTGTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488567.5
ENST00000496878.5
CDS CAA 72 bp GCCAAAAACTCAGCTTCTGAAACTCTGAGAATGTCCTaGAGCAATGGGTTAGGGATCTGTGTCTGCCCCTTC +
Preference number: 6 (lower is better)
Translates to: AKNSASETLRMS*SNGLGICVCPF
Trigger: GAAGGGGCAGACACAGATCCCTAACCCATTGCTCAAGGACATTCTCAGAGTTTCAGAAGCTGAGTTTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000439144.5
ENST00000614476.4
CDS TCA 72 bp CTCTCTGTGCAGAGAACATGTAGGTTGTGTTTGGTATaGGCAGTGCTGCAGTGGATGTTCCTGTACAGGTTT +
Preference number: 6 (lower is better)
Translates to: LSVQRTCRLCLV*AVLQWMFLYRF
Trigger: AAACCTGTACAGGAACATCCACTGCAGCACTGCTCATACCAAACACAACCTACATGTTCTCTGCACAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS CAA 72 bp CATCCTGAAGTATGCATACTGAAACTTGTATTCCAGTaGACCCAGGTCCTCTCGAAGAACAGAGGGGCAACT +
Preference number: 6 (lower is better)
Translates to: HPEVCILKLVFQ*TQVLSKNRGAT
Trigger: AGTTGCCCCTCTGTTCTTCGAGAGGACCTGGGTCAACTGGAATACAAGTTTCAGTATGCATACTTCAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000406593.1
ENST00000414146.5
ENST00000439144.5
ENST00000614476.4
CDS CAA 72 bp TTAAATACCAGGTGTTCATTTCCTAGAACTCAGAGATaGGAGGGGCGTGTGTTACCCTCCTGGGTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LNTRCSFPRTQR*EGRVLPSWVSS
Trigger: TGAAGAGACCCAGGAGGGTAACACACGCCCCTCCAATCTCTGAGTTCTAGGAAATGAACACCTGGTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 72 bp GCCAGAGAAAGAATTCTCCCTTCGAGGCCCAACAAATaGAGAAGGAACTGTGATGGACCACTTCCAAAACAG +
Preference number: 6 (lower is better)
Translates to: ARERILPSRPNK*RRNCDGPLPKQ
Trigger: CTGTTTTGGAAGTGGTCCATCACAGTTCCTTCTCAATTTGTTGGGCCTCGAAGGGAGAATTCTTTCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS CAA 90 bp CAGCCAAAATCTGCAACTTCTTGTACCTTCTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTTCCTCATTTGCATAATAGGCAGTTT +
Preference number: 6 (lower is better)
Translates to: QPKSATSCTFSKPKL*QVTGALPHLHNRQF
Trigger: AAACTGCCTATTATGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGAGAAGGTACAAGAAGTTGCAGATTTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475860.1
CDS TCA 72 bp CCAGAGAAAGAATTCTCCCTTCGAGGCCCAACAAATTaGGAAGGAACTGTGATGGACCACTTCCAAAACAGA +
Preference number: 6 (lower is better)
Translates to: PEKEFSLRGPTN*EGTVMDHFQNR
Trigger: TCTGTTTTGGAAGTGGTCCATCACAGTTCCTTCTCAATTTGTTGGGCCTCGAAGGGAGAATTCTTTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479205.5
CDS GCA 72 bp TGCAGAGAACATGTAGGTTGTGTTTGGTATGAGCAGTaGTGCAGTGGATGTTCCTGTACAGGTTTTCCAGTA +
Preference number: 6 (lower is better)
Translates to: CREHVGCVWYEQ*CSGCSCTGFPV
Trigger: TACTGGAAAACCTGTACAGGAACATCCACTGCAGCACTGCTCATACCAAACACAACCTACATGTTCTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS CCA 72 bp CTCAAGGAGGCACTGAACAAGATTCCTCCTGCACTCTaGTTCCTGCACATAGTTATTGGATCTAACACAAGA +
Preference number: 6 (lower is better)
Translates to: LKEALNKIPPAL*FLHIVIGSNTR
Trigger: TCTTGTGTTAGATCCAATAACTATGTGCAGGAACCAGAGTGCAGGAGGAATCTTGTTCAGTGCCTCCTTGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS CAA 72 bp GATCTAACACAAGATAACTCCTCAATGACCCCTCCATaGGAGGCTGTAGTCAGTTTGCGCAACAAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: DLTQDNSSMTPP*EAVVSLRNKEA
Trigger: AGCTTCTTTGTTGCGCAAACTGACTACAGCCTCCAATGGAGGGGTCATTGAGGAGTTATCTTGTGTTAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000241527.10
ENST00000391980.7
ENST00000401626.6
ENST00000407095.3
ENST00000424798.5
ENST00000434791.1
ENST00000475860.1
ENST00000495694.5
ENST00000614476.4
CDS CAA 72 bp TCTGCAACTTCTTGTACCTTCTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTTCCTCATTTGCATAAT +
Preference number: 6 (lower is better)
Translates to: SATSCTFSKPKL*QVTGALPHLHN
Trigger: ATTATGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGAGAAGGTACAAGAAGTTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475860.1
CDS CAA 72 bp AGTAGAAGGAGTACACTCTTCTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTTCCTCATTTGCATAAT +
Preference number: 6 (lower is better)
Translates to: SRRSTLFSKPKL*QVTGALPHLHN
Trigger: ATTATGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGAGAAGAGTGTACTCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495694.5
CDS GCA 72 bp CATGGGCATCCACCAAAGGTGTTTGCTTCTGTGAAATaGCTGATCACGCCTTTTGACTTTATGTTGGGTTAT +
Preference number: 6 (lower is better)
Translates to: HGHPPKVFASVK*LITPFDFMLGY
Trigger: ATAACCCAACATAAAGTCAAAAGGCGTGATCAGGCATTTCACAGAAGCAAACACCTTTGGTGGATGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS GCA 72 bp ACCTATAAACTTGGATGTGAACGATACCTTCTATCTTaGCATCATACTCCCTGTTCTCTCCCCTCAGTTAAC +
Preference number: 6 (lower is better)
Translates to: TYKLGCERYLLS*HHTPCSLPSVN
Trigger: GTTAACTGAGGGGAGAGAACAGGGAGTATGATGGCAAGATAGAAGGTATCGTTCACATCCAAGTTTATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464344.6
CDS CAA 90 bp TTTTTCATAAGTAGAAGGAGTACACTCTTCTCCAAGCCCAAGCTTTaGCAGGTAACTGGAGCGCTTCCTCATTTGCATAATAGGCAGTTT +
Preference number: 6 (lower is better)
Translates to: FFISRRSTLFSKPKL*QVTGALPHLHNRQF
Trigger: AAACTGCCTATTATGCAAATGAGGAAGCGCTCCAGTTACCTGCAAAAGCTTGGGCTTGGAGAAGAGTGTACTCCTTCTACTTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495694.5
CDS GCA 72 bp AGTGGAAAAGCTGGATCTAGGATGAGGATGTGTGAATaGCCAAATTACATGAGAACTAAGTCATTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: SGKAGSRMRMCE*PNYMRTKSFSK
Trigger: CTTAGAAAATGACTTAGTTCTCATGTAATTTGGGCATTCACACATCCTCATCCTAGATCCAGCTTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464344.6
ENST00000496878.5
CDS GCA 72 bp AGTAAAGAAATTAAAGATTTCTCTTTGGCTGATGTATaGAGAGAATCTAGTCTTTCACTTCCTCCACTCAAA +
Preference number: 6 (lower is better)
Translates to: SKEIKDFSLADV*RESSLSLPPLK
Trigger: TTTGAGTGGAGGAAGTGAAAGACTAGATTCTCTGCATACATCAGCCAAAGAGAAATCTTTAATTTCTTTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460915.1