Pregenerated sensors for MTERF3 (Homo sapiens)
Ensembl gene IDs: ENSG00000156469Ensembl transcript IDs: ENST00000287025.4, ENST00000517720.1, ENST00000522822.5, ENST00000523821.5, ENST00000524341.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGACCGACCAACTCGCTaGGCCGCACGTCCCGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKDRPTR*AARPVP Trigger: CGGGACGGGACGTGCGGCCCAGCGAGTTGGTCGGTC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGCTTCCCGTAGCGGGTaGCCCCGGGACCGACCAACT | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKASRSG*PRDRPT Trigger: AGTTGGTCGGTCCCGGGGTCACCCGCTACGGGAAGC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGTCTCGAAGTGTGAATaGAGCTGGTGGCAATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKVSKCE*SWWQWR Trigger: CCTCCATTGCCACCAGCTTCATTCACACTTCGAGAC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGATTTTTCTTAGTCTGTaGCGAGGCCTGCTTCCCGTA | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKIFLSL*RGLLPV Trigger: TACGGGAAGCAGGCCTCGCCACAGACTAAGAAAAAT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGATTCTCCTGACTACTTaGGCTAGTAGACTGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKILLTT*ASRLGT Trigger: AGTTCCCAGTCTACTAGCTCAAGTAGTCAGGAGAAT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAATAGCCTCTTCCTCTaGAATTGGCTGCATTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKNSLFL*NWLHWR Trigger: TCTCCAATGCAGCCAATTTCAGAGGAAGAGGCTATT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGGGTCTGCAATAATCTaGATAGCCTCTTCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKGSAII*IASSSE Trigger: TTCAGAGGAAGAGGCTATTCAGATTATTGCAGACCC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCTGCATTGGAGACAATaGAGGCAATTCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKLHWRQ*RQFIQF Trigger: GAACTGGATGAATTGCCTCCATTGTCTCCAATGCAG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAGGAATGCTCCCAGTTaGTTATCCTCTATACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKRNAPS*LSSIPT Trigger: TGTGGGTATAGAGGATAACCAACTGGGAGCATTCCT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGCTCCTCAACTTAACTaGGTTAAACCATCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKAPQLN*VKPSGY Trigger: ATACCCAGATGGTTTAACTCAGTTAAGTTGAGGAGC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGCAGAATTATTCTCCTaGCTACTTGAGCTAGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKAELFS*LLELVD Trigger: GTCTACTAGCTCAAGTAGTCAGGAGAATAATTCTGC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAAAATGGTGCTTTTCTaGCCATCTGTGCAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKKMVLF*PSVQHL Trigger: CAGATGTTGCACAGATGGTCAGAAAAGCACCATTTT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTTCAAAGTCCTGTACTaGTGCTTTGGCAATCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKFKVLY*CFGNLF Trigger: GAAGAGATTGCCAAAGCATCAGTACAGGACTTTGAA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTGGAAGGAAGCAGACTaGTTTGGGCAGAATTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKWKEAD*FGQNYS Trigger: AGAATAATTCTGCCCAAAGCAGTCTGCTTCCTTCCA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTCTCAGAAGGAGGTTTaGTGCTTCTGGATGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKSQKEV*CFWMFF Trigger: GAAAAACATCCAGAAGCAGCAAACCTCCTTCTGAGA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCATCTGGGTATCTGTTaGGCTGACAAAGCCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKHLGIC*ADKAIF Trigger: AAAAATGGCTTTGTCAGCCCAACAGATACCCAGATG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCTTGAGCTAGTAGACTaGGAACTATTCCATAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKLELVD*ELFHKE Trigger: CTCCTTATGGAATAGTTCCCAGTCTACTAGCTCAAG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGTGACTGTTCATTCATaGAAGGAAGCAGACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKVTVHS*KEADCF Trigger: AAAGCAGTCTGCTTCCTTCCATGAATGAACAGTCAC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTTGACAATGATGTGGTaGGGAATGCTCATCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKLTMMW*GMLITL Trigger: CAATGTGATGAGCATTCCCCACCACATCATTGTCAA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAACTTGACAATGATGTaGTGGGGAATGCTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKNLTMM*WGMLIT Trigger: TGTGATGAGCATTCCCCACCACATCATTGTCAAGTT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGATCCAGTCTTTCCACTaGAAAGTTCAGCAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKIQSFH*KVQQKW Trigger: CCATTTTTGCTGAACTTTTCAGTGGAAAGACTGGAT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCAGAAGGAGGTTTGCTaGTTCTGGATGTTTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKQKEVC*FWMFFY Trigger: ATAGAAAAACATCCAGAAGCAGCAAACCTCCTTCTG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGATGCTCATCACATTGTaGACAAAATCAAACGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKMLITL*TKSNVS Trigger: CGAGACGTTTGATTTTGTGCACAATGTGATGAGCAT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR GCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGATGTAGTTAGGTTTTaGTGGATCATACTGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKDVVRF*WIILCS Trigger: AGAGCACAGTATGATCCAGCAAAACCTAACTACATC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTCTGTGAAGAAACTGTaGGAACTTGACAATGATGTG | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKSVKKL*ELDNDV Trigger: CACATCATTGTCAAGTTCCCACAGTTTCTTCACAGA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTCTTTGGGATTCTGGTaGTCATATGTTGAATTTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKSLGFW*SYVEFR Trigger: ACGAAATTCAACATATGATCACCAGAATCCCAAAGA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CCA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAAAGTTCAGCAAAAATaGTGCTTTTCTGACCATCTG | + |
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Preference number: 4 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKKVQQK*CFSDHL Trigger: CAGATGGTCAGAAAAGCACCATTTTTGCTGAACTTT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS TCA 90 bp | TATTCACAATACCCTGCTGTGGCGAGGCCTGCTTCCCGTAGCGGGTaGCCCCGGGACCGACCAACTCGCTGGGCCGCACGTCCCGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: YSQYPAVARPASRSG*PRDRPTRWAARPVP Trigger: CGGGACGGGACGTGCGGCCCAGCGAGTTGGTCGGTCCCGGGGTCACCCGCTACGGGAAGCAGGCCTCGCCACAGCAGGGTATTGTGAATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517720.1 |
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| CDS TCA 90 bp | TGGTGGCAATGGAGGGTCTGCAATAATCTGAATAGCCTCTTCCTCTaGAATTGGCTGCATTGGAGACAATGGAGGCAATTCATCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: WWQWRVCNNLNSLFL*NWLHWRQWRQFIQF Trigger: GAACTGGATGAATTGCCTCCATTGTCTCCAATGCAGCCAATTTCAGAGGAAGAGGCTATTCAGATTATTGCAGACCCTCCATTGCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 |
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| CDS TCA 90 bp | CTTCTGCAGAGTCTCAGAATGATCCACATAGTCTCGAAGTGTGAATaGAGCTGGTGGCAATGGAGGGTCTGCAATAATCTGAATAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LLQSLRMIHIVSKCE*SWWQWRVCNNLNSL Trigger: GAGGCTATTCAGATTATTGCAGACCCTCCATTGCCACCAGCTTCATTCACACTTCGAGACTATGTGGATCATTCTGAGACTCTGCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 ENST00000524341.5 |
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| CDS TCA 90 bp | TCATTCATGGAAGGAAGCAGACTGCTTTGGGCAGAATTATTCTCCTaGCTACTTGAGCTAGTAGACTGGGAACTATTCCATAAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SFMEGSRLLWAELFS*LLELVDWELFHKEE Trigger: TTCCTCCTTATGGAATAGTTCCCAGTCTACTAGCTCAAGTAGTCAGGAGAATAATTCTGCCCAAAGCAGTCTGCTTCCTTCCATGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287025.4 ENST00000523821.5 |
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| CDS CCA 90 bp | AACAGCCTTGTATTAAATACCTGTGGGAACTTGACAATGATGTGGTaGGGAATGCTCATCACATTGTGCACAAAATCAAACGTCTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: NSLVLNTCGNLTMMW*GMLITLCTKSNVSV Trigger: TACCGAGACGTTTGATTTTGTGCACAATGTGATGAGCATTCCCCACCACATCATTGTCAAGTTCCCACAGGTATTTAATACAAGGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287025.4 ENST00000522822.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCAGGAATGCTCCCAGTaGGTTATCCTCTATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKQECSQ*VILYTH Trigger: GTGGGTATAGAGGATAACCAACTGGGAGCATTCCTG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTTCCAGTTAGCAGCCTaGGGAGACGAACTACCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKFQLAA*GDELPD Trigger: ATCTGGTAGTTCGTCTCCCAAGGCTGCTAACTGGAA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS CCA 90 bp | AATCAAAGCTGGATATATTTTGTGTCTTCTGTGACTGTTCATTCATaGAAGGAAGCAGACTGCTTTGGGCAGAATTATTCTCCTGACTAC | + |
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Preference number: 5 (lower is better) Translates to: NQSWIYFVSSVTVHS*KEADCFGQNYSPDY Trigger: GTAGTCAGGAGAATAATTCTGCCCAAAGCAGTCTGCTTCCTTCCATGAATGAACAGTCACAGAAGACACAAAATATATCCAGCTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287025.4 ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAGGAAGCAGACTGCTTaGGGCAGAATTATTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKRKQTA*GRIILL Trigger: CAGGAGAATAATTCTGCCCAAAGCAGTCTGCTTCCT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCCTCTTCCTCTGAAATaGGCTGCATTGGAGACAATG | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKPLPLK*AALETM Trigger: CATTGTCTCCAATGCAGCCAATTTCAGAGGAAGAGG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAGAAACTGTGGGAACTaGACAATGATGTGGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKRNCGN*TMMWWG Trigger: TCCCCACCACATCATTGTCAAGTTCCCACAGTTTCT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGCTGAAATTGGCTGCATaGGAGACAATGGAGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKLKLAA*ETMEAI Trigger: AATTGCCTCCATTGTCTCCAATGCAGCCAATTTCAG...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGTCTCAGAAGGAGGTTaGCTGCTTCTGGATGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKVSEGG*LLLDVF Trigger: AAAAACATCCAGAAGCAGCAAACCTCCTTCTGAGAC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGGATGTTTTTCTATCTaGGACAAATCCACGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKGCFSI*DKSTPR Trigger: TCTAGGCGTGGATTTGTCCAAGATAGAAAAACATCC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGGGAATGCTCATCACATaGTGCACAAAATCAAACGTC | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKGMLIT*CTKSNV Trigger: GACGTTTGATTTTGTGCACAATGTGATGAGCATTCC...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS TCA 90 bp | ACTACCAGATCTCTAGTCTTCTTCACACTAAGTTCAAGTTCTTTCTaGAAAAATCCCAATCTGTTATCCAGTCTTTCCACTGAAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: TTRSLVFFTLSSSSF*KNPNLLSSLSTEKF Trigger: GAACTTTTCAGTGGAAAGACTGGATAACAGATTGGGATTTTTTCAGAAAGAACTTGAACTTAGTGTGAAGAAGACTAGAGATCTGGTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 ENST00000524341.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAAAACGTTTTGTGAGTaGTGCAGCATTAATGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKKTFCE*CSINEA Trigger: AGCCTCATTAATGCTGCACAACTCACAAAACGTTTT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGTCCTGTACTGATGCTTaGGCAATCTCTTCACAAAAT | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKSCTDA*AISSQN Trigger: ATTTTGTGAAGAGATTGCCAAAGCATCAGTACAGGA...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS-3UTR CAA 90 bp | GTGTCTTTCTTTGACCTTAAACAGCCTTGTATTAAATACCATGTGTTCAGTAAGAACAAGTGTCTTTCTTaGACCTTAAACAGCCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: VSFFDLKQPCIKYHVFSKNKCLS*TLNSLV Trigger: TACAAGGCTGTTTAAGGTCAAAGAAAGACACTTGTT...CTTACTGAACACATGGTATTTAATACAAGGCTGTTTAAGGTCAAAGAAAGACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523821.5 |
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| CDS TCA 72 bp | TACCCTGCTGTGGCGAGGCCTGCTTCCCGTAGCGGGTaGCCCCGGGACCGACCAACTCGCTGGGCCGCACGT | + |
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Preference number: 6 (lower is better) Translates to: YPAVARPASRSG*PRDRPTRWAAR Trigger: ACGTGCGGCCCAGCGAGTTGGTCGGTCCCGGGGTCACCCGCTACGGGAAGCAGGCCTCGCCACAGCAGGGTA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517720.1 |
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| CDS TCA 72 bp | TGGAGGGTCTGCAATAATCTGAATAGCCTCTTCCTCTaGAATTGGCTGCATTGGAGACAATGGAGGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: WRVCNNLNSLFL*NWLHWRQWRQF Trigger: GAATTGCCTCCATTGTCTCCAATGCAGCCAATTTCAGAGGAAGAGGCTATTCAGATTATTGCAGACCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 |
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| CDS TCA 72 bp | AGTCTCAGAATGATCCACATAGTCTCGAAGTGTGAATaGAGCTGGTGGCAATGGAGGGTCTGCAATAATCTG | + |
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Preference number: 6 (lower is better) Translates to: SLRMIHIVSKCE*SWWQWRVCNNL Trigger: CAGATTATTGCAGACCCTCCATTGCCACCAGCTTCATTCACACTTCGAGACTATGTGGATCATTCTGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 ENST00000524341.5 |
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| CDS CAA 72 bp | AGAAGGAGGTTTGCTGCTTCTGGATGTTTTTCTATCTaGGACAAATCCACGCCTAGAAGAACCAACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRRFAASGCFSI*DKSTPRRTNFC Trigger: GCAGAAGTTGGTTCTTCTAGGCGTGGATTTGTCCAAGATAGAAAAACATCCAGAAGCAGCAAACCTCCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 ENST00000524341.5 |
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| CDS CCA 72 bp | GTATTAAATACCTGTGGGAACTTGACAATGATGTGGTaGGGAATGCTCATCACATTGTGCACAAAATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VLNTCGNLTMMW*GMLITLCTKSN Trigger: GTTTGATTTTGTGCACAATGTGATGAGCATTCCCCACCACATCATTGTCAAGTTCCCACAGGTATTTAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287025.4 ENST00000522822.5 |
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| CDS CCA 72 bp | CTTGTATTAAATACCTGTGGGAACTTGACAATGATGTaGTGGGGAATGCTCATCACATTGTGCACAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LVLNTCGNLTMM*WGMLITLCTKS Trigger: TGATTTTGTGCACAATGTGATGAGCATTCCCCACCACATCATTGTCAAGTTCCCACAGGTATTTAATACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287025.4 ENST00000522822.5 |
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| CDS CAA 72 bp | AACTTGACAATGATGTGGTGGGGAATGCTCATCACATaGTGCACAAAATCAAACGTCTCGGTAAGTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: NLTMMWWGMLIT*CTKSNVSVSFI Trigger: AATGAAACTTACCGAGACGTTTGATTTTGTGCACAATGTGATGAGCATTCCCCACCACATCATTGTCAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000287025.4 ENST00000522822.5 ENST00000523821.5 |
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