RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTDH (Homo sapiens)

Ensembl gene IDs: ENSG00000147649

Ensembl transcript IDs: ENST00000336273.8, ENST00000519293.1, ENST00000519934.5, ENST00000521933.1, ENST00000522104.1, ENST00000522313.1

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTTGAGAATGGGGAGGAACAATATAGAAAGAACCCGGATCCCTaGCCCTGCATAATGTCATATGGGCTCTGGATTGCCTTCCCAAAC +
Preference number: 1 (lower is better)
Translates to: QVENGEEQYRKNPDP*PCIMSYGLWIAFPN
Trigger: GTTTGGGAAGGCAATCCAGAGCCCATATGACATTATGCAGGGTCAGGGATCCGGGTTCTTTCTATATTGTTCCTCCCCATTCTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR GCA 90 bp GAGGTATCTCTATACTGGATCCACCTCAACTTAGCAACGCATCTCTaGATCTCCACAATGCCATTCTCCTCAAAACATCTGCTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: EVSLYWIHLNLATHL*ISTMPFSSKHLLSL
Trigger: TAAAGACAGCAGATGTTTTGAGGAGAATGGCATTGTGGAGATGCAGAGATGCGTTGCTAAGTTGAGGTGGATCCAGTATAGAGATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CCA 90 bp GATAGATCAGTACCATTGGTTACAGCTGTTAAACAGGTTCGTTCTTaGCGCCACATAAAAACAAGCCAATCACATCGAATAAATCATGGC +
Preference number: 1 (lower is better)
Translates to: DRSVPLVTAVKQVRS*RHIKTSQSHRINHG
Trigger: GCCATGATTTATTCGATGTGATTGGCTTGTTTTTATGTGGCGCCAAGAACGAACCTGTTTAACAGCTGTAACCAATGGTACTGATCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CCA 90 bp CAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCAAAAATGCTTTaGTGCAGGAGATACACAATGTATGTCAACTCTGACAGACACTGT +
Preference number: 1 (lower is better)
Translates to: QISAQLEEHLISKML*CRRYTMYVNSDRHC
Trigger: ACAGTGTCTGTCAGAGTTGACATACATTGTGTATCTCCTGCACCAAAGCATTTTTGAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CCA 90 bp TTCTCAATTAACGTATTCACAAGCTTCAGTACTGTAACTATTAGCTaGCAAATGTCTTACAACACACTATATACATGTCATGATGCTAGG +
Preference number: 1 (lower is better)
Translates to: FSINVFTSFSTVTIS*QMSYNTLYTCHDAR
Trigger: CCTAGCATCATGACATGTATATAGTGTGTTGTAAGACATTTGCCAGCTAATAGTTACAGTACTGAAGCTTGTGAATACGTTAATTGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGAGGCTGTCTTCCCCTaGTCCTCCCTGAATCACCAC +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLEAVFP*SSLNHH
Trigger: GTGGTGATTCAGGGAGGAGCAGGGGAAGACAGCCTC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCAGTCTCGCTCTTTCATaGTGGAGTGCAGTGGTGCGA +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLSLALS*WSAVVR
Trigger: TCGCACCACTGCACTCCAGCATGAAAGAGCGAGACT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCAGTGAGCCAGAAGTGTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLSEPEV*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACACTTCTGGCTCACT...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCAACCTCCTGAGTAGCTaGGATTACAGGCGCCCACTA +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLNLLSS*DYRRPL
Trigger: TAGTGGGCGCCTGTAATCCCAGCTACTCAGGAGGTT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCATGCAAATGACATATTaGACCTGGTGGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLMQMTY*TWWQAA
Trigger: AGCTGCCTGCCACCAGGTGCAATATGTCATTTGCAT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCATGGTTTCAAACTCCTaGGCTCAAACAATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLMVSNS*AQTILP
Trigger: CGGGAGGATTGTTTGAGCCCAGGAGTTTGAAACCAT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTTCCTCGGCTGCAGATaGGATAGGGCACAATCTGTT +
Preference number: 2 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLFLGCR*DRAQSV
Trigger: AACAGATTGTGCCCTATCTCATCTGCAGCCGAGGAA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCAAGATGCAAAATGACTaGCAAAGTCCCTCCCCACAA +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLKMQND*QSPSPQ
Trigger: TTGTGGGGAGGGACTTTGTCAGTCATTTTGCATCTT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGCCACCATGCCCAGCTaGGAAGCAAACTTCTATCTT +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLATMPS*EANFYL
Trigger: AAGATAGAAGTTTGCTTCTCAGCTGGGCATGGTGGC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATCTTTCATGCTGGAGTaGAGTGGTGCGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSFMLE*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACTCCAGCATGAAAGA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 90 bp GACTTGGTCTGTGAAGGAGGCACACTATTTTGCTTGGTATTTGACTaGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: DLVCEGGTLFCLVFD*DLSVSCSIGGTWEE
Trigger: CTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCCTTCACAGACCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTACTGCACCCGGCCAGCTaGCATCTCTTAAAACAAAAT +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLHPAS*HLLKQN
Trigger: ATTTTGTTTTAAGAGATGGCAGCTGGCCGGGTGCAG...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTACCCAGCGGCAAAGCTTaGACCTATGGTTTTAGGAAA +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLPSGKA*TYGFRK
Trigger: TTTCCTAAAACCATAGGTGCAAGCTTTGCCGCTGGG...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTATCTGCCTCAACCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLSASTS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGA...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGATTTTAGTGCTTTCTaGGTTGATGATGGAAACCAG +
Preference number: 2 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLDFSAF*VDDGNQ
Trigger: CTGGTTTCCATCATCAACTCAGAAAGCACTAAAATC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATCTGCATCTCCACAATaGCATTCTCCTCAAAACATC +
Preference number: 2 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPSASPQ*HSPQNI
Trigger: GATGTTTTGAGGAGAATGGCATTGTGGAGATGCAGA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGTTCAAATGATTCTCTaGCTTAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLVQMIL*LSLLSS
Trigger: GCTACTCAGGAGGCTAAGGCAGAGAATCATTTGAAC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGAAGCATCTTATTCATaGCACCATAGGAGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLEASYS*HHRRLS
Trigger: AGACAGCCTCCTATGGTGGCATGAATAAGATGCTTC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp TCAGAATCACTTTTTGATAAGATTACAGATGGCTCGGTAGAAGTAGCAGGTGGAGACGAGTACTTCGGCTaGATCACTAGTGCTTATGGT +
Preference number: 2 (lower is better)
Translates to: SESLFDKITDGSVEVAGGDEYFG*ITSAYG
Trigger: ACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTC...TCCACCTGCTACTTCTACCGAGCCATCTGTAATCTTATCAAAAAGTGATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR TCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATACAGTGTACATGGCTaGGCATGCACTATTTATAGT +
Preference number: 2 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPYSVHG*ACTIYS
Trigger: ACTATAAATAGTGCATGCTCAGCCATGTACACTGTA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGCACGATCTTGGCTTTaGAAACTCCGTCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLARSWL*KLRLLG
Trigger: ACCCAGGAGACGGAGTTTGCAAAGCCAAGATCGTGC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp CTTTTTGATAAGATTACAGATGGCTCGGTAGAAGTAGCAGGTGGAAGAGTCTTGTTCTTCTGTGTCCTGTaGAGTAGAGTTATCTTCACC +
Preference number: 2 (lower is better)
Translates to: LFDKITDGSVEVAGGRVLFFCVL*SRVIFT
Trigger: GGTGAAGATAACTCTACTGCACAGGACACAGAAGAA...CAAGACTCTTCCACCTGCTACTTCTACCGAGCCATCTGTAATCTTATCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAAAACAGGTTCGTTCTTaGCGCCACATAAAAACAAGC +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLKQVRS*RHIKTS
Trigger: GCTTGTTTTTATGTGGCGCCAAGAACGAACCTGTTT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTTTCAGTATGTATGTaGAGACAGGCTGGATTAGGG +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLFSVCM*RQAGLG
Trigger: CCCTAATCCAGCCTGTCTCCACATACATACTGAAAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp AGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCACTAGTGCTTATGGTCTTTTTAGAGGTATTCACTaGAAGGTCTTCTCTAATCTC +
Preference number: 2 (lower is better)
Translates to: RLAIFDEYFGWITSAYGLFRGIH*KVFSNL
Trigger: GAGATTAGAGAAGACCTTCCAGTGAATACCTCTAAA...AAGACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR CAA 90 bp GATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCTaGTCAGAATCACTTTTTGATAAGATTACAGATGGCTCGGTAGAA +
Preference number: 2 (lower is better)
Translates to: DLSVSCSIGGTWEEL*SESLFDKITDGSVE
Trigger: TTCTACCGAGCCATCTGTAATCTTATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR TCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATCTCCTTCAAGAAATTaGTGCATATTCTACGCACTA +
Preference number: 2 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPSPSRN*CIFYAL
Trigger: TAGTGCGTAGAATATGCATCAATTTCTTGAAGGAGA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTAGCTTTCCTAGTCTaGCAACGCAATACTGTTGAA +
Preference number: 2 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLAFLV*QRNTVE
Trigger: TTCAACAGTATTGCGTTGTCAGACTAGGAAAGCTAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGTTCAATTATATTGTTaGGCACAGACCATTTGGCAC +
Preference number: 2 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLVQLYC*AQTIWH
Trigger: GTGCCAAATGGTCTGTGCTCAACAATATAATTGAAC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCACACCCATCTACTTTTTaGAAATTTTGTAGAGATGGG +
Preference number: 2 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPHPSTF*KFCRDG
Trigger: CCCATCTCTACAAAATTTGCAAAAAGTAGATGGGTG...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR GCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGTTCAAGCGATTCTCTaGCTCAACCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLVQAIL*LNLLSS
Trigger: GCTACTCAGGAGGTTGAGGCAGAGAATCGCTTGAAC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTTGATTCCATTTTTATaGTGGTGTCCGCAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLLIPFL*WCPQFC
Trigger: ACAAAACTGCGGACACCACCATAAAAATGGAATCAA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAGTGTCTTCCATCACTaGGTATATTCTGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSVFHH*VYSADL
Trigger: GAGGTCAGCAGAATATACTCAGTGATGGAAGACACT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
3UTR-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAGTGTCTTCCATCACTaGGTATATTCTGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSVFHH*VYSADL
Trigger: GAGGTCAGCAGAATATACTCAGTGATGGAAGACACT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTATTGGGTGAATTATTCTaGCCTCCCCTCCCCAATAAA +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLLGELF*PPLPNK
Trigger: TTTATTGGGGAGGGGAGGTCAGAATAATTCACCCAA...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAACCACTAGATTTGGGTaGATTATTCTGACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLTTRFG*IILTSP
Trigger: AGGGGAGGTCAGAATAATTCACCCAAATCTAGTGGT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 90 bp CATTATCCAATTCTCATCTTCCTAACAGAATCTCAAAATGTTAATTaGGCCCATGACAACCCAGATAGAATATTACGTCCCATCCAGCTT +
Preference number: 2 (lower is better)
Translates to: HYPILIFLTESQNVN*AHDNPDRILRPIQL
Trigger: AAGCTGGATGGGACGTAATATTCTATCTGGGTTGTCATGGGCCAAATTAACATTTTGAGATTCTGTTAGGAAGATGAGAATTGGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 90 bp TATTTTGCTTGGTATTTGACTTGGATTTATCTGTCTCTTGTAGTATaGGCGGCACTTGGGAAGAGCTCTTGTCAGAATCACTTTTTGATA +
Preference number: 2 (lower is better)
Translates to: YFAWYLTWIYLSLVV*AALGKSSCQNHFLI
Trigger: TATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAAGCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAACCTTTACAAAATGCTaGCACCTTAGGAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLTFTKC*HLRNPP
Trigger: TGGAGGATTCCTAAGGTGTCAGCATTTTGTAAAGGT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAATGTCATATGGGCTCTaGATTGCCTTCCCAAACTTT +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLMSYGL*IAFPNF
Trigger: AAAGTTTGGGAAGGCAATCCAGAGCCCATATGACAT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGATAACTGGAGGTGTTaGCAATGTCAATTAAAGCTG +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLDNWRC*QCQLKL
Trigger: CAGCTTTAATTGACATTGTCAACACCTCCAGTTATC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGAGATAAAGAAATGGTaGGGTAGAGTTGAGAGAGTT +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLEIKKW*GRVERV
Trigger: AACTCTCTCAACTCTACCTCACCATTTCTTTATCTC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGGCAGGTTATGCATTTaGTCAAAGCACTTTGATTTA +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLGRLCI*SKHFDL
Trigger: TAAATCAAAGTGCTTTGATCAAATGCATAACCTGCC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATTGATTCCATTTTTATaGTGGTGTCCGCAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLIPFL*WCPQFC
Trigger: ACAAAACTGCGGACACCACCATAAAAATGGAATCAA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
3UTR-3UTR CCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTACTCAAAATGTTAATTTaGCCCATGACAACCCAGATA +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLLKMLI*PMTTQI
Trigger: TATCTGGGTTGTCATGGGCCAAATTAACATTTTGAG...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAATTCCATTTTTATGGTaGTGTCCGCAGTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLIPFLW*CPQFCF
Trigger: AAAACAAAACTGCGGACACCACCATAAAAATGGAAT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTATTCCATTTTTATGGTaGTGTCCGCAGTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTIPFLW*CPQFCF
Trigger: AAAACAAAACTGCGGACACCACCATAAAAATGGAAT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
3UTR CCA 72 bp CAGTGGCACGATCTTGGCTTTGCAAACTCCGTCTCCTaGGTTCAAATGATTCTCTGCCTTAGCCTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: QWHDLGFANSVS*VQMILCLSLLS
Trigger: ACTCAGGAGGCTAAGGCAGAGAATCATTTGAACCCAGGAGACGGAGTTTGCAAAGCCAAGATCGTGCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR GCA 72 bp GTTATTTCCCTACTAGTTCTGGAAGCATCTTATTCATaGCACCATAGGAGGCTGTCTTCCCCTGCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: VISLLVLEASYS*HHRRLSSPAPP
Trigger: GGGAGGAGCAGGGGAAGACAGCCTCCTATGGTGGCATGAATAAGATGCTTCCAGAACTAGTAGGGAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR TCA 72 bp AATGGGGAGGAACAATATAGAAAGAACCCGGATCCCTaGCCCTGCATAATGTCATATGGGCTCTGGATTGCC +
Preference number: 3 (lower is better)
Translates to: NGEEQYRKNPDP*PCIMSYGLWIA
Trigger: GGCAATCCAGAGCCCATATGACATTATGCAGGGTCAGGGATCCGGGTTCTTTCTATATTGTTCCTCCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp GGTAGAAGTAGCAGGTGGAAGAGTCTTGATAGGCTGGCTATTTTTGACGAGTACTTTTGGATTTCCCAGTaGGAAGAGCTCCCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: GRSSRWKSLDRLAIFDEYFWISQ*EELPLP
Trigger: AGGGAGAGGGAGCTCTTCCAACTGGGAAATCCAAAA...GTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTACTTCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCATCTTGTACAAGCAATaGCTGTTTGGGGACACAGCC +
Preference number: 3 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLILYKQ*LFGDTA
Trigger: GGCTGTGTCCCCAAACAGCAATTGCTTGTACAAGAT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGGATTAGGGAGCCTTTaGAGTGGCTTCTCTAGGATA +
Preference number: 3 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPGLGSL*SGFSRI
Trigger: TATCCTAGAGAAGCCACTCAAAAGGCTCCCTAATCC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp TTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCTTGTCAATAGGCTGGCTATTTTaGACGAGTACTTCGGCTGGA +
Preference number: 3 (lower is better)
Translates to: LDLSVSCSIGGTWEELLSIGWLF*TSTSAG
Trigger: TCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT...TGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR GCA 72 bp CTATACTGGATCCACCTCAACTTAGCAACGCATCTCTaGATCTCCACAATGCCATTCTCCTCAAAACATCTG +
Preference number: 3 (lower is better)
Translates to: LYWIHLNLATHL*ISTMPFSSKHL
Trigger: CAGATGTTTTGAGGAGAATGGCATTGTGGAGATGCAGAGATGCGTTGCTAAGTTGAGGTGGATCCAGTATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CCA 72 bp CTTGATAGGCTGGCTATTTTTGACGAGTACTTCGGCTaGATCACTAGTGCTTATGGTCTTCAAGGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: LDRLAIFDEYFG*ITSAYGLQGKS
Trigger: GCTTTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTATCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCCTTCAAGACAAGTGTTaGCAAACACATGTCCAATTC +
Preference number: 3 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLLQDKC*QTHVQF
Trigger: GAATTGGACATGTGTTTGCAAACACTTGTCTTGAAG...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGATAGATCAGTACCATaGGTTACAGCTGTTAAACAG +
Preference number: 3 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPDRSVP*VTAVKQ
Trigger: CTGTTTAACAGCTGTAACCAATGGTACTGATCTATC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGAGAGTTCAATTATATaGTTGAGCACAGACCATTTG +
Preference number: 3 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLESSII*LSTDHL
Trigger: CAAATGGTCTGTGCTCAACAATATAATTGAACTCTC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATCTCTCAACTGTTGTTaGCTCAATTGTCGGTACAGA +
Preference number: 3 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSLNCC*LNCRYR
Trigger: TCTGTACCGACAATTGAGCAAACAACAGTTGAGAGA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR TCA 72 bp AGTTGGAACATTATTAGCTGCTACACTAAGCAGCACTaGATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: SWNIISCYTKQH*IAFQISAQLEE
Trigger: TTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGCTTAGTGTAGCAGCTAATAATGTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR GCA 72 bp CAGCTGGAAGAACACTTGATCTCAAAAATGCTTTGGTaGAGGAGATACACAATGTATGTCAACTCTGACAGA +
Preference number: 3 (lower is better)
Translates to: QLEEHLISKMLW*RRYTMYVNSDR
Trigger: TCTGTCAGAGTTGACATACATTGTGTATCTCCTGCACCAAAGCATTTTTGAGATCAAGTGTTCTTCCAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CCA 72 bp GTACCATTGGTTACAGCTGTTAAACAGGTTCGTTCTTaGCGCCACATAAAAACAAGCCAATCACATCGAATA +
Preference number: 3 (lower is better)
Translates to: VPLVTAVKQVRS*RHIKTSQSHRI
Trigger: TATTCGATGTGATTGGCTTGTTTTTATGTGGCGCCAAGAACGAACCTGTTTAACAGCTGTAACCAATGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTACCTTGTCAAACACGTTaGGTAAAGGCTATTTACAGT +
Preference number: 3 (lower is better)
Translates to: STLTDTVRGAHYPILIFLPCQTR*VKAIYS
Trigger: ACTGTAAATAGCCTTTACCAAACGTGTTTGACAAGG...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCATCTCCTTCAAGAAATaGATGCATATTCTACGCACT +
Preference number: 3 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLISFKK*MHILRT
Trigger: AGTGCGTAGAATATGCATCAATTTCTTGAAGGAGAT...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACTTCAAGACAAGTGTTaGCAAACACATGTCCAATTC +
Preference number: 3 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLQDKC*QTHVQF
Trigger: GAATTGGACATGTGTTTGCAAACACTTGTCTTGAAG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
3UTR-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGAAAGTAATTCCAGTTaGTGCAGTGAGTTTACAGGA +
Preference number: 3 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLESNSS*CSEFTG
Trigger: TCCTGTAAACTCACTGCACAAACTGGAATTACTTTC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGAGCCCTCCTCGGCCTaGTGGGCCAGCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLEPSSA*WASSSC
Trigger: GCAGGACGAGCTGGCCCAGCAGGCCGAGGAGGGCTC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGAGGGACTCGCAGGATaGCGCCGGGGCGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLEGLAG*RRGAET
Trigger: CGTCTCCGCGCCCCGGCGTCATCCTGCGAGTCCCTC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGCCCGAGCGCGCCAGTaGCCACCAGGATCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPARARQ*PPGSPS
Trigger: GCTGGGTGATCCTGGTGGGCACTGGCGCGCTCGGGC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGGCTCCTCCGCTTTTTaGGGGCGCCGGCGCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPGSSAF*GRRRKP
Trigger: CGGCTTGCGCCGGCGCCCGCAAAAAGCGGAGGAGCC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCACCCTCCTCGGCCTGCTaGGCCAGCTCGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPPSSAC*ASSSCQ
Trigger: CTGGCAGGACGAGCTGGCCCAGCAGGCCGAGGAGGG...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAAGGGAGTGTCTCCAGTaGCGGCCGCTAAGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLRECLQ*RPLSGV
Trigger: GACGCCGCTTAGCGGCCGCCACTGGAGACACTCCCT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGGCGCGGAGACGCAGTaGAATAGTCGAGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLGAETQ*NSRGKR
Trigger: TCGCTTCCCTCGACTATTCCACTGCGTCTCCGCGCC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp ATAGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCACTAGTGCTTATGGTCGCATCTCCAGTGTCTTaGCTCCAGGCAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: IGWLFLTSTSAGSLVLMVASPVS*LQADGS
Trigger: TGAGCCATCTGCCTGGAGTCAAGACACTGGAGATGC...GACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCTCTGCCTCAACCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLSASTS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGA...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGCCCGAGCGCGCCAGTaGCCACCAGGATCACCCAGC +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKARARQ*PPGSPS
Trigger: GCTGGGTGATCCTGGTGGGCACTGGCGCGCTCGGGC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGAGGCTGTCTTCCCCTaGTCCTCCCTGAATCACCAC +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPEAVFP*SSLNHH
Trigger: GTGGTGATTCAGGGAGGAGCAGGGGAAGACAGCCTC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 72 bp GAGCCACCATGCCCAGCTGAGAAGCAAACTTCTATCTaGTACAAGCAATTGCTGTTTGGGGACACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: EPPCPAEKQTSI*YKQLLFGDTAN
Trigger: GTTGGCTGTGTCCCCAAACAGCAATTGCTTGTACAAGATAGAAGTTTGCTTCTCAGCTGGGCATGGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCCCTTTCTTGCTAACATaGGCAAGGTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLPFLLT*ARFPSR
Trigger: CCTGGAGGGGAACCTTGCTCATGTTAGCAAGAAAGG...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAAGTGAGCCAGAAGTGTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSEPEV*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCACACTTCTGGCTCACT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCCCACTCTTCTGCTGGTaGATTCCAATCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLPLFCW*IPIRVG
Trigger: CCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGG...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp AGGTGGAAGAGTCTTGATAGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCAGTATTGGCGGCACTTaGGAAGAGCTCTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RWKSLDRLAIFDEYFGWISIGGT*EELLSE
Trigger: TTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACT...GATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCTCTCCTCACCTGCACTaGTCTGTGAGGAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLSPHLH*SVRRVL
Trigger: TAAAACTCTCCTCACAGATCAGTGCAGGTGAGGAGA...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATCCTGCAGAAGCAGGTaGAACGGAGTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSCRSR*NGVPLL
Trigger: GAGAAGTGGAACTCCGTTTCACCTGCTTCTGCAGGA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GAGTACTTCGGCTGGATCACTAGTGCTTATGGTCTTCAAGGAAAAAGCTTTTTCTCCTGCAGAAGCAGGTaGAACGGAGTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: EYFGWITSAYGLQGKSFFSCRSR*NGVPLL
Trigger: GAGAAGTGGAACTCCGTTTCACCTGCTTCTGCAGGA...GAAAAAGCTTTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGTACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTCTGCCTTAGCCTCCTaGGTAGCTGGGATTACAGGA +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLSALAS*VAGITG
Trigger: TCCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATCTCCTGGGTTCAAATaGTTCTCTGCCTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPSPGFK*FSALAS
Trigger: GGAGGCTAAGGCAGAGAATCATTTGAACCCAGGAGA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGTCCTGCCAGCTCCGTaGAGCCATCTTCCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKVLPAP*SHLPSR
Trigger: ACGGGAGGGAAGATGGCTGCACGGAGCTGGCAGGAC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTACTTCGTCTACCCAATTaGCCCACTCTTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLRLPN*PTLLLV
Trigger: CACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAG...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTACAGACGTGAGCCACTaGACCCGGCCAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTTDVSH*TRPAAI
Trigger: GATGGCAGCTGGCCGGGTGCAGTGGCTCACGTCTGT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCAGGCGTGAGCCACCGTaGCAGAAACTGTTTTTATGT +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLRREPP*QKLFLC
Trigger: ACATAAAAACAGTTTCTGGCACGGTGGCTCACGCCT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAAGTCTCGCTCTTTCATaGTGGAGTGCAGTGGTGCGA +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSLALS*WSAVVR
Trigger: TCGCACCACTGCACTCCAGCATGAAAGAGCGAGACT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGCCCCACTCTTCTGCTaGTGCATTCCAATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPAPLFC*CIPIRV
Trigger: AACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGTAGAAGTAGCAGGTGGAAGAGTCTTGATAGGCTGGCTATTTTTGACGAGTACGGTAGAAGTAGCAGGTaGAAGAGTCTTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSSRWKSLDRLAIFDEYGRSSR*KSLDRL
Trigger: CAGCCTATCAAGACTCTTCCACCTGCTACTTCTACC...GTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTACTTCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAACAATCCTCCCGCGTTaGCCTCCCAAAGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTTILPR*PPKELG
Trigger: TCCAAGCTCTTTGGGAGGCCAACGCGGGAGGATTGT...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCCTGCATAATGTCATATaGGCTCTGGATTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLLHNVI*ALDCLP
Trigger: GGGAAGGCAATCCAGAGCCCATATGACATTATGCAG...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGAAGCATCTTATTCATaGCACCATAGGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLEASYS*HHRRLS
Trigger: AGACAGCCTCCTATGGTGGCATGAATAAGATGCTTC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGGTAGAAGTAGCAGGTaGAAGAGTCTTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPGRSSR*KSLDRL
Trigger: CAGCCTATCAAGACTCTTCCACCTGCTACTTCTACC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAAGTATTGGCGGCACTTaGGAAGAGCTCTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPSIGGT*EELLSE
Trigger: TTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACT...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGCATCTCCAGTGTCTTaGCTCCAGGCAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKASPVS*LQADGS
Trigger: TGAGCCATCTGCCTGGAGTCAAGACACTGGAGATGC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATTCAGACTTGGTCTGTaGAGGAGGCACACTATTTTG +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPFRLGL*RRHTIL
Trigger: CAAAATAGTGTGCCTCCTTCACAGACCAAGTCTGAA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACATTCCTCGGCTGCAGATaGGATAGGGCACAATCTGTT +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTFLGCR*DRAQSV
Trigger: AACAGATTGTGCCCTATCTCATCTGCAGCCGAGGAA...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAAAGATGCAAAATGACTaGCAAAGTCCCTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPKMQND*QSPSPQ
Trigger: TTGTGGGGAGGGACTTTGTCAGTCATTTTGCATCTT...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAATGCAAATGACATATTaGACCTGGTGGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLMQMTY*TWWQAA
Trigger: AGCTGCCTGCCACCAGGTGCAATATGTCATTTGCAT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTCTGTACTTGCAGTATaGGCAGGCAGGCTACTAAGT +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLSVLAV*AGRLLS
Trigger: ACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTGACTCCAGGCAGATaGCTCAGTTTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLTPGR*LSFPLS
Trigger: GGAAAGAGGAAAACTGAGCCATCTGCCTGGAGTCAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GAGTACTTCGGCTGGATCACTAGTGCTTATGGTCTTCAAGGAAAAAGCTTTTTCTTGACTCCAGGCAGATaGCTCAGTTTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: EYFGWITSAYGLQGKSFFLTPGR*LSFPLS
Trigger: GGAAAGAGGAAAACTGAGCCATCTGCCTGGAGTCAA...GAAAAAGCTTTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGTACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGGTAGACTGAGAAACTaGCTCAGCAGTAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLGRLRN*LSSRPN
Trigger: ATTGGGTCTACTGCTGAGCCAGTTTCTCAGTCTACC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGACGAGTACTTCGGCTaGATCACTAGTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLDEYFG*ITSAYG
Trigger: ACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp CTTTTTGATAAGATTACAGATGGCTCGGTAGAAGTAGCAGGTGGAAGAGTCTTGGACGAGTACTTCGGCTaGATCACTAGTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: LFDKITDGSVEVAGGRVLDEYFG*ITSAYG
Trigger: ACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTC...CAAGACTCTTCCACCTGCTACTTCTACCGAGCCATCTGTAATCTTATCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATATGTGGAGACAGGCTaGATTAGGGAGCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLYVETG*IREPFE
Trigger: CTCAAAAGGCTCCCTAATCCAGCCTGTCTCCACATA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCATGGTTTCAAACTCCTaGGCTCAAACAATCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLMVSNS*AQTILP
Trigger: CGGGAGGATTGTTTGAGCCCAGGAGTTTGAAACCAT...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCATGTCATATGGGCTCTaGATTGCCTTCCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLMSYGL*IAFPNF
Trigger: AAAGTTTGGGAAGGCAATCCAGAGCCCATATGACAT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGCATCTCCAGTGTCTTaGCTCCAGGCAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKASPVS*LQADGS
Trigger: TGAGCCATCTGCCTGGAGTCAAGACACTGGAGATGC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp AGAAGTAGCAGGTGGAAGAGTCTTGATAGGCTGGCTATTTTTGACGAGTACTTCAATGCCAGAAAATATTaGACGGTCACTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: RSSRWKSLDRLAIFDEYFNARKY*TVTPTP
Trigger: AGGAGTTGGAGTGACCGTTCAATATTTTCTGGCATT...GAAGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAACCACTAGATTTGGGTaGATTATTCTGACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLTTRFG*IILTSP
Trigger: AGGGGAGGTCAGAATAATTCACCCAAATCTAGTGGT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TTGACGAGTACTTCGGCTGGATCACTAGTGCTTATGGTCTTCAAGGAAAAAGCTTTCTTCTGTGTCCTGTaGAGTAGAGTTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: LTSTSAGSLVLMVFKEKAFFCVL*SRVIFT
Trigger: GGTGAAGATAACTCTACTGCACAGGACACAGAAGAA...AGCTTTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR GCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGCACGATCTTGGCTTTaGAAACTCCGTCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKARSWL*KLRLLG
Trigger: ACCCAGGAGACGGAGTTTGCAAAGCCAAGATCGTGC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATCTTGTACAAGCAATTaGTGTTTGGGGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLSCTSN*CLGTQP
Trigger: TGGCTGTGTCCCCAAACAGCAATTGCTTGTACAAGA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAAAACAGGTTCGTTCTTaGCGCCACATAAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPKQVRS*RHIKTS
Trigger: GCTTGTTTTTATGTGGCGCCAAGAACGAACCTGTTT...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAGCAAACTCCGTCTCCTaGGTTCAAATGATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTANSVS*VQMILC
Trigger: GCAGAGAATCATTTGAACCCAGGAGACGGAGTTTGC...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTACTTGAACCCAGGAATTaGAGACCAGCCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLLEPRN*RPAWAT
Trigger: CGTTGCCCAGGCTGGTCTCCAATTCCTGGGTTCAAG...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 72 bp GTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCTaGTCAGAATCACTTTTTGATAAGATTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: VSCSIGGTWEEL*SESLFDKITDG
Trigger: GCCATCTGTAATCTTATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
3UTR CAA 72 bp TGGTATTTGACTTGGATTTATCTGTCTCTTGTAGTATaGGCGGCACTTGGGAAGAGCTCTTGTCAGAATCAC +
Preference number: 4 (lower is better)
Translates to: WYLTWIYLSLVV*AALGKSSCQNH
Trigger: GTGATTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTTGCTGTTACACTTTaGGGTGTTCGAACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLFAVTL*GVRTAS
Trigger: TGAAGCTGTTCGAACACCTCAAAGTGTAACAGCAAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATCCTGCAGAAGCAGGTaGAACGGAGTTCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSCRSR*NGVPLL
Trigger: GAGAAGTGGAACTCCGTTTCACCTGCTTCTGCAGGA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TTGGTATTTGACTTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAATTCAGACTTGGTCTGTaGAGGAGGCACACTATTTTG +
Preference number: 4 (lower is better)
Translates to: LVFDLDLSVSCSIGGTWEFRLGL*RRHTIL
Trigger: CAAAATAGTGTGCCTCCTTCACAGACCAAGTCTGAA...TTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCACCTTTACAAAATGCTaGCACCTTAGGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLTFTKC*HLRNPP
Trigger: TGGAGGATTCCTAAGGTGTCAGCATTTTGTAAAGGT...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCTTCCAGTTTGTGCAGTaGGTTTACAGGAAAATCTTA +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLFQFVQ*VYRKIL
Trigger: TAAGATTTTCCTGTAAACTCACTGCACAAACTGGAA...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACTTCGTCTACCCAATTaGCCCACTCTTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLRLPN*PTLLLV
Trigger: CACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGTTCAAGCGATTCTCTaGCTCAACCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKVQAIL*LNLLSS
Trigger: GCTACTCAGGAGGTTGAGGCAGAGAATCGCTTGAAC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAATCTTTCATGCTGGAGTaGAGTGGTGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKSFMLE*SGAISA
Trigger: AGCTGAGATCGCACCACTGCACTCCAGCATGAAAGA...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAGGCATGAGCCACCATaGCCAGCTGAGAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTRHEPP*PAEKQT
Trigger: AGTTTGCTTCTCAGCTGGGCATGGTGGCTCATGCCT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCTTTAGAGGTATTCACTaGAAGGTCTTCTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLFRGIH*KVFSNL
Trigger: GAGATTAGAGAAGACCTTCCAGTGAATACCTCTAAA...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGAGGTATCTCTATACTaGATCCACCTCAACTTAGCA +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLEVSLY*IHLNLA
Trigger: TGCTAAGTTGAGGTGGATCCAGTATAGAGATACCTC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAACCTCCTGAGTAGCTaGGATTACAGGCGCCCACTA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTNLLSS*DYRRPL
Trigger: TAGTGGGCGCCTGTAATCCCAGCTACTCAGGAGGTT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTCTCGCTCTTTCATGCTaGAGTGCAGTGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLALSC*SAVVRS
Trigger: AGATCGCACCACTGCACTCCAGCATGAAAGAGCGAG...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 72 bp ATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTaGATCTCAAAAATGCTTTGGTGCAGGAGATACACA +
Preference number: 4 (lower is better)
Translates to: IAFQISAQLEEH*ISKMLWCRRYT
Trigger: TGTGTATCTCCTGCACCAAAGCATTTTTGAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 72 bp TGGTCTGTGAAGGAGGCACACTATTTTGCTTGGTATTaGACTTGGATTTATCTGTCTCTTGTAGTATTGGCG +
Preference number: 4 (lower is better)
Translates to: WSVKEAHYFAWY*TWIYLSLVVLA
Trigger: CGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCCTTCACAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGGAACCAACAGGAAATaGTGCGGTTGTAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKGTNRK*CGCKLL
Trigger: GAGCAACTTACAACCGCATCATTTCCTGTTGGTTCC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATTCCTCGGCTGCAGATaGGATAGGGCACAATCTGTT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKFLGCR*DRAQSV
Trigger: AACAGATTGTGCCCTATCTCATCTGCAGCCGAGGAA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGATAACTGGAGGTGTTaGCAATGTCAATTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLDNWRC*QCQLKL
Trigger: CAGCTTTAATTGACATTGTCAACACCTCCAGTTATC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGAGATAAAGAAATGGTaGGGTAGAGTTGAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLEIKKW*GRVERV
Trigger: AACTCTCTCAACTCTACCTCACCATTTCTTTATCTC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTACACTAAGCAGCACTaGATAGCCTTCCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLYTKQH*IAFQIS
Trigger: AGAAATTTGGAAGGCTATTCAGTGCTGCTTAGTGTA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACCACTCTTCTGCTGGTaGATTCCAATCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKPLFCW*IPIRVG
Trigger: CCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAATTGCCCCACTCTTCTaGTGGTGCATTCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKIAPLF*WCIPIR
Trigger: TCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAAT...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GAGTACTTCGGCTGGATCACTAGTGCTTATGGTCTTCAAGGAAAAAGCTTTTTCGGAGGCACACTATTTTaGTTGGTATTTGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: EYFGWITSAYGLQGKSFFGGTLF*LVFDLD
Trigger: ATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCC...GAAAAAGCTTTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGTACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATCCGCCCATTTGGTTTaGGCTTCTCGGACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSAHLV*ASRTVS
Trigger: AGAAACTGTCCGAGAAGCCCAAACCAAATGGGCGGA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTCCGCCCATTTGGTTTaGGCTTCTCGGACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSAHLV*ASRTVS
Trigger: AGAAACTGTCCGAGAAGCCCAAACCAAATGGGCGGA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGCCCCACTCTTCTGCTaGTGCATTCCAATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKAPLFC*CIPIRV
Trigger: AACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACATCAGGAATTGGTTCCTaGGACTTTAGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTSGIGS*DFRSEA
Trigger: AGCTTCACTTCTAAAGTCCCAGGAACCAATTCCTGA...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCACTCAAAATGTTAATTTaGCCCATGACAACCCAGATA +
Preference number: 4 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPLKMLI*PMTTQI
Trigger: TATCTGGGTTGTCATGGGCCAAATTAACATTTTGAG...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGGAACCAACAGGAAATaGTGCGGTTGTAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKGTNRK*CGCKLL
Trigger: GAGCAACTTACAACCGCATCATTTCCTGTTGGTTCC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAACCTGCACTGATCTGTaGGGAGAGTTTTACAGACTT +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKTCTDL*GEFYRL
Trigger: AAGTCTGTAAAACTCTCCTCACAGATCAGTGCAGGT...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATCTCCTCACCTGCACTaGTCTGTGAGGAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSPHLH*SVRRVL
Trigger: TAAAACTCTCCTCACAGATCAGTGCAGGTGAGGAGA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTCTTTATCATCATCTaGGACCTTTTGATCATCAGG +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLFFIII*DLLIIR
Trigger: CCTGATGATCAAAAGGTCTCAGATGATGATAAAGAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAAGTGTCTTCCATCACTaGGTATATTCTGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKSVFHH*VYSADL
Trigger: GAGGTCAGCAGAATATACTCAGTGATGGAAGACACT...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGGCAGGTTATGCATTTaGTCAAAGCACTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLGRLCI*SKHFDL
Trigger: TAAATCAAAGTGCTTTGATCAAATGCATAACCTGCC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAATCTTCAAGTAAGAACTaGAAGCCACATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKSSSKN*KPHVGQ
Trigger: CTGGCCAACATGTGGCTTTCAGTTCTTACTTGAAGA...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGATGCGGTTGTAAGTTaGTCGGTGGTAACTGTGATG +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLDAVVS*SVVTVM
Trigger: CATCACAGTTACCACCGAGCAACTTACAACCGCATC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGATGCGGTTGTAAGTTaGTCGGTGGTAACTGTGATG +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTDAVVS*SVVTVM
Trigger: CATCACAGTTACCACCGAGCAACTTACAACCGCATC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTATTGCCCCACTCTTCTaGTGGTGCATTCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTIAPLF*WCIPIR
Trigger: TCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAAT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTCTGCACCCGGCCAGCTaGCATCTCTTAAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLHPAS*HLLKQN
Trigger: ATTTTGTTTTAAGAGATGGCAGCTGGCCGGGTGCAG...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTCCCAGCGGCAAAGCTTaGACCTATGGTTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTPSGKA*TYGFRK
Trigger: TTTCCTAAAACCATAGGTGCAAGCTTTGCCGCTGGG...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACTGAGTCAGGAGGATTaGTTGAACCCAGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLSQED*LNPGIG
Trigger: TCCAATTCCTGGGTTCAAGCAATCCTCCTGACTCAG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTGACTCCAGGCAGATaGCTCAGTTTTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLTPGR*LSFPLS
Trigger: GGAAAGAGGAAAACTGAGCCATCTGCCTGGAGTCAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAACATTCCAATCAGAGTTaGGATCAGCAGAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKHSNQS*DQQKTD
Trigger: GTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATG...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp CTTTTTGATAAGATTACAGATGGCTCGGTAGAAGTAGCAGGTGGAAGAGTCTTGTTTAGAGGTATTCACTaGAAGGTCTTCTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: LFDKITDGSVEVAGGRVLFRGIH*KVFSNL
Trigger: GAGATTAGAGAAGACCTTCCAGTGAATACCTCTAAA...CAAGACTCTTCCACCTGCTACTTCTACCGAGCCATCTGTAATCTTATCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGACGAGTACTTCGGCTaGATCACTAGTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTDEYFG*ITSAYG
Trigger: ACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp TTGGTATTTGACTTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAAGAGTCTTGATAGGCTaGCTATTTTTGACGAGTACT +
Preference number: 4 (lower is better)
Translates to: LVFDLDLSVSCSIGGTWERVLIG*LFLTST
Trigger: AGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCT...TTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGGTAGAAGTAGCAGGTaGAAGAGTCTTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTGRSSR*KSLDRL
Trigger: CAGCCTATCAAGACTCTTCCACCTGCTACTTCTACC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAGTATTGGCGGCACTTaGGAAGAGCTCTTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSIGGT*EELLSE
Trigger: TTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTGATTCCATTTTTATaGTGGTGTCCGCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLIPFL*WCPQFC
Trigger: ACAAAACTGCGGACACCACCATAAAAATGGAATCAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAATGACATATTGCACCTaGTGGCAGGCAGCTACATCT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKMTYCT*WQAATS
Trigger: AGATGTAGCTGCCTGCCACCAGGTGCAATATGTCAT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAACCTGCACTGATCTGTaGGGAGAGTTTTACAGACTT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKTCTDL*GEFYRL
Trigger: AAGTCTGTAAAACTCTCCTCACAGATCAGTGCAGGT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAAATGCCAGAAAATATTaGACGGTCACTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKNARKY*TVTPTP
Trigger: AGGAGTTGGAGTGACCGTTCAATATTTTCTGGCATT...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTCAGACTTGGTCTGTaGAGGAGGCACACTATTTTG +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTFRLGL*RRHTIL
Trigger: CAAAATAGTGTGCCTCCTTCACAGACCAAGTCTGAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTGGGTGAATTATTCTaGCCTCCCCTCCCCAATAAA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLGELF*PPLPNK
Trigger: TTTATTGGGGAGGGGAGGTCAGAATAATTCACCCAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAATCTGCATCTCCACAATaGCATTCTCCTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKSASPQ*HSPQNI
Trigger: GATGTTTTGAGGAGAATGGCATTGTGGAGATGCAGA...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTATTAGCAACGCATCTCTaGATCTCCACAATGCCATTC +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLLATHL*ISTMPF
Trigger: GAATGGCATTGTGGAGATGCAGAGATGCGTTGCTAA...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGTTCAAATGATTCTCTaGCTTAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTVQMIL*LSLLSS
Trigger: GCTACTCAGGAGGCTAAGGCAGAGAATCATTTGAAC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACATTCCAATCAGAGTTaGGATCAGCAGAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKHSNQS*DQQKTD
Trigger: GTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAAATGACAACATTGGATaGATAGATCAGTACCATTGG +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTNDNIG*IDQYHW
Trigger: CCAATGGTACTGATCTATCCATCCAATGTTGTCATT...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAATTTTCAGTATGTATGTaGAGACAGGCTGGATTAGGG +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKFSVCM*RQAGLG
Trigger: CCCTAATCCAGCCTGTCTCCACATACATACTGAAAA...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAACTGTAACTATTAGCTaGCAAATGTCTTACAACACA +
Preference number: 4 (lower is better)
Translates to: STLTDTVRGAHYPILIFLTVTIS*QMSYNT
Trigger: TGTGTTGTAAGACATTTGCCAGCTAATAGTTACAGT...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATTTGCTGTTACACTTTaGGGTGTTCGAACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKFAVTL*GVRTAS
Trigger: TGAAGCTGTTCGAACACCTCAAAGTGTAACAGCAAA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAATGCCAGAAAATATTaGACGGTCACTCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTNARKY*TVTPTP
Trigger: AGGAGTTGGAGTGACCGTTCAATATTTTCTGGCATT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAAATGTATGTCAACTCTaGCAGACACTGTTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLNVCQL*QTLLEV
Trigger: CACCTCTAACAGTGTCTGTCAGAGTTGACATACATT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATTCTTCTGTGTCCTGTaGAGTAGAGTTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKFFCVL*SRVIFT
Trigger: GGTGAAGATAACTCTACTGCACAGGACACAGAAGAA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTCTTCTGTGTCCTGTaGAGTAGAGTTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTFFCVL*SRVIFT
Trigger: GGTGAAGATAACTCTACTGCACAGGACACAGAAGAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAGCCTTCCAAATTTCTaGTCAGCTGGAAGAACACTT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSLPNF*SAGRTL
Trigger: AAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTCAGGAATTGGTTCCTaGGACTTTAGAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSGIGS*DFRSEA
Trigger: AGCTTCACTTCTAAAGTCCCAGGAACCAATTCCTGA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAAGAGTCTTGATAGGCTaGCTATTTTTGACGAGTACT +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKRVLIG*LFLTST
Trigger: AGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCT...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAATTCCATTTTTATGGTaGTGTCCGCAGTTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTIPFLW*CPQFCF
Trigger: AAAACAAAACTGCGGACACCACCATAAAAATGGAAT...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336273.8
3UTR CAA 72 bp ATTCTCATCTTCCTAACAGAATCTCAAAATGTTAATTaGGCCCATGACAACCCAGATAGAATATTACGTCCC +
Preference number: 4 (lower is better)
Translates to: ILIFLTESQNVN*AHDNPDRILRP
Trigger: GGGACGTAATATTCTATCTGGGTTGTCATGGGCCAAATTAACATTTTGAGATTCTGTTAGGAAGATGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGTTTTCATTCAATCCTaGAGAAACCTGAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKVFIQS*RNLKCR
Trigger: TCTACACTTCAGGTTTCTTCAGGATTGAATGAAAAC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTACAGTGTACATGGCTaGGCATGCACTATTTATAGT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTYSVHG*ACTIYS
Trigger: ACTATAAATAGTGCATGCTCAGCCATGTACACTGTA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTAGCTTTCCTAGTCTaGCAACGCAATACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLAFLV*QRNTVE
Trigger: TTCAACAGTATTGCGTTGTCAGACTAGGAAAGCTAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGTTCAATTATATTGTTaGGCACAGACCATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLVQLYC*AQTIWH
Trigger: GTGCCAAATGGTCTGTGCTCAACAATATAATTGAAC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGATTTTAGTGCTTTCTaGGTTGATGATGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLDFSAF*VDDGNQ
Trigger: CTGGTTTCCATCATCAACTCAGAAAGCACTAAAATC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp CTGACATGTAAACATACTGCCATGTTCCTGAAACAGATGTTAACACCTGATAAAGTGTGTCACAAACAGTaGCATTTTCAAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LTCKHTAMFLKQMLTPDKVCHKQ*HFQKCL
Trigger: TAAGCACTTTTGAAAATGTCACTGTTTGTGACACAC...TTTATCAGGTGTTAACATCTGTTTCAGGAACATGGCAGTATGTTTACATGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACCAACCTCATACATATaGACTAATGCATGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKPTSYI*TNACQV
Trigger: AACTTGGCATGCATTAGTTCATATGTATGAGGTTGG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAGCTGGAAGAACACTTaGTCTCAAAAATGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSWKNT*SQKCFG
Trigger: ACCAAAGCATTTTTGAGATCAAGTGTTCTTCCAGCT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGGAGGCACACTATTTTaGTTGGTATTTGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKGGTLF*LVFDLD
Trigger: ATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGGAGGCACACTATTTTaGTTGGTATTTGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTGGTLF*LVFDLD
Trigger: ATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACTCTCAACTGTTGTTTaGTCAATTGTCGGTACAGAT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLSTVV*SIVGTD
Trigger: ATCTGTACCGACAATTGAGCAAACAACAGTTGAGAG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAGAGTCTTGATAGGCTaGCTATTTTTGACGAGTACT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKRVLIG*LFLTST
Trigger: AGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAAATCCTGAAGAAACCTaGAGTGTAGAATCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLNPEET*SVESPF
Trigger: AAAAGGAGATTCTACACTTCAGGTTTCTTCAGGATT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAATCCTGAAGAAACCTaGAGTGTAGAATCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKNPEET*SVESPF
Trigger: AAAAGGAGATTCTACACTTCAGGTTTCTTCAGGATT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGTTTTCATTCAATCCTaGAGAAACCTGAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKVFIQS*RNLKCR
Trigger: TCTACACTTCAGGTTTCTTCAGGATTGAATGAAAAC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATTCTTTATCATCATCTaGGACCTTTTGATCATCAGG +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKFFIII*DLLIIR
Trigger: CCTGATGATCAAAAGGTCTCAGATGATGATAAAGAA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGGCAGGTTATGCATTTaGTCAAAGCACTTTGATTTA +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTGRLCI*SKHFDL
Trigger: TAAATCAAAGTGCTTTGATCAAATGCATAACCTGCC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR TCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTATCTCCTTCAAGAAATTaGTGCATATTCTACGCACTA +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLSPSRN*CIFYAL
Trigger: TAGTGCGTAGAATATGCATCAATTTCTTGAAGGAGA...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAAGACAGACCATCAATaGCAGAAAATATTGAACGGT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKKTDHQ*QKILNG
Trigger: ACCGTTCAATATTTTCTGGCATTGATGGTCTGTCTT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519934.5
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTTAGAGGTATTCACTaGAAGGTCTTCTCTAATCTC +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTFRGIH*KVFSNL
Trigger: GAGATTAGAGAAGACCTTCCAGTGAATACCTCTAAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CCA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTGATTCCATTTTTATaGTGGTGTCCGCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLIPFL*WCPQFC
Trigger: ACAAAACTGCGGACACCACCATAAAAATGGAATCAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR GCA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAAGTAATTCCAGTTTGTaGAGTGAGTTTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLSNSSL*SEFTGK
Trigger: TTTTCCTGTAAACTCACTGCACAAACTGGAATTACT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR GCA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAATCAAAAATGCTTTGGTaGAGGAGATACACAATGTAT +
Preference number: 4 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSKMLW*RRYTMY
Trigger: ATACATTGTGTATCTCCTGCACCAAAGCATTTTTGA...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS CCA 90 bp CCGCCGCCGCCAGGAGACCCGGGAGGCGGGAGGGAGTGTCTCCAGTaGCGGCCGCTAAGCGGCGTCTCGGCGCCAGCGCCAGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: PPPPGDPGGGRECLQ*RPLSGVSAPAPGPA
Trigger: AGCGGGGCCTGGCGCTGGCGCCGAGACGCCGCTTAGCGGCCGCCACTGGAGACACTCCCTCCCGCCTCCCGGGTCTCCTGGCGGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS TCA 90 bp AGCTCCGTGCAGCCATCTTCCCTCCCGTCAGAGGGACTCGCAGGATaGCGCCGGGGCGCGGAGACGCAGTGGAATAGTCGAGGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: SSVQPSSLPSEGLAG*RRGAETQWNSRGKR
Trigger: TCGCTTCCCTCGACTATTCCACTGCGTCTCCGCGCCCCGGCGTCATCCTGCGAGTCCCTCTGACGGGAGGGAAGATGGCTGCACGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCAGGGCTCCTCCGCTTTTaGCGGGCGCCGGCGCAAGCC +
Preference number: 5 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPGLLRF*RAPAQA
Trigger: GGCTTGCGCCGGCGCCCGCAAAAAGCGGAGGAGCCC...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGGGCTCCTCCGCTTTTaGCGGGCGCCGGCGCAAGCC +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKGLLRF*RAPAQA
Trigger: GGCTTGCGCCGGCGCCCGCAAAAAGCGGAGGAGCCC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS TCA 90 bp CTGCAGAAGCAGGTGAAACGGAGTTCCACTTCTCCTCACCTGCACTaGTCTGTGAGGAGAGTTTTACAGACTTTTCATTCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LQKQVKRSSTSPHLH*SVRRVLQTFHSSLL
Trigger: GAGGAGGCTGGAATGAAAAGTCTGTAAAACTCTCCTCACAGATCAGTGCAGGTGAGGAGAAGTGGAACTCCGTTTCACCTGCTTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000522313.1
CDS-3UTR CAA 90 bp AGGTGGAAGAGTCTTGATAGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCTTTTGGATTTCCCAGTaGGAAGAGCTCCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: RWKSLDRLAIFDEYFGWIFWISQ*EELPLP
Trigger: AGGGAGAGGGAGCTCTTCCAACTGGGAAATCCAAAA...GATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS CCA 90 bp CTACCCAATTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATTTAACCCAGACCATTCATCAT +
Preference number: 5 (lower is better)
Translates to: LPNCPTLLLVHSNQS*DQQKTDHLTQTIHH
Trigger: ATGATGAATGGTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000521933.1
CDS-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCACAAGCAATTGCTGTTaGGGGACACAGCCAACCTCA +
Preference number: 5 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLTSNCC*GTQPTS
Trigger: TGAGGTTGGCTGTGTCCCCAAACAGCAATTGCTTGT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS CCA 90 bp CTACCCAATTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATCAATGCCAGAAAATATTGAAC +
Preference number: 5 (lower is better)
Translates to: LPNCPTLLLVHSNQS*DQQKTDHQCQKILN
Trigger: GTTCAATATTTTCTGGCATTGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519934.5
CDS-3UTR CAA 90 bp TTGGTATTTGACTTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAAGCATCTCCAGTGTCTaGACTCCAGGCAGATGGCTC +
Preference number: 5 (lower is better)
Translates to: LVFDLDLSVSCSIGGTWESISSV*TPGRWL
Trigger: GAGCCATCTGCCTGGAGTCAAGACACTGGAGATGCT...TTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAATACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCATAGGCTGGCTATTTTaGACGAGTACTTCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLIGWLF*TSTSAG
Trigger: TCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGCAGGTGGAAGAGTCTaGATAGGCTGGCTATTTTTG +
Preference number: 5 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLAGGRV*IGWLFL
Trigger: CAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCCTGTCTCTTGTAGTATaGGCGGCACTTGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLLSLVV*AALGKS
Trigger: GCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAG...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp CTTTTTGATAAGATTACAGATGGCTCGGTAGAAGTAGCAGGTGGAAGAGTCTTGCTGTCTCTTGTAGTATaGGCGGCACTTGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LFDKITDGSVEVAGGRVLLSLVV*AALGKS
Trigger: GCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAG...CAAGACTCTTCCACCTGCTACTTCTACCGAGCCATCTGTAATCTTATCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACATCTTCGTCTACCCAATaGCCCCACTCTTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTSSSTQ*PHSSAG
Trigger: ACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGA...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCTTTTGGATTTCCCAGTaGGAAGAGCTCCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLFWISQ*EELPLP
Trigger: AGGGAGAGGGAGCTCTTCCAACTGGGAAATCCAAAA...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TTTGACTTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCGCAGGTGGAAGAGTCTaGATAGGCTGGCTATTTTTG +
Preference number: 5 (lower is better)
Translates to: FDLDLSVSCSIGGTWEELAGGRV*IGWLFL
Trigger: CAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGC...GAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS CCA 90 bp CTACCCAATTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATCTAAAATTTAACAGTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LPNCPTLLLVHSNQS*DQQKTDHLKFNSVN
Trigger: ATTCACACTGTTAAATTTTAGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522104.1
CDS-3UTR CAA 90 bp TTTGACTTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCCAATGCCAGAAAATATaGAACGGTCACTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: FDLDLSVSCSIGGTWEELQCQKI*NGHSNS
Trigger: GGAGTTGGAGTGACCGTTCAATATTTTCTGGCATTG...GAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAACAATCCTCCCGCGTaGGCCTCCCAAAGAGCTTGG +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKNNPPA*ASQRAW
Trigger: CCAAGCTCTTTGGGAGGCCAACGCGGGAGGATTGTT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTATATAGTCTGTACTaGCAGTATGCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLYSLY*QYAQAG
Trigger: GCCTGCCTGCGCATACTGCAAGTACAGACTATATAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGTCCGCCCATTTGGTTaGGGCTTCTCGGACAGTTTC +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLVRPFG*GFSDSF
Trigger: GAAACTGTCCGAGAAGCCCAAACCAAATGGGCGGAC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGTCCGCCCATTTGGTTaGGGCTTCTCGGACAGTTTC +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKVRPFG*GFSDSF
Trigger: GAAACTGTCCGAGAAGCCCAAACCAAATGGGCGGAC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAAGCATCTCCAGTGTCTaGACTCCAGGCAGATGGCTC +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKSISSV*TPGRWL
Trigger: GAGCCATCTGCCTGGAGTCAAGACACTGGAGATGCT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTACAATGCCAGAAAATATaGAACGGTCACTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: STLTDTVRGAHYPILIFLQCQKI*NGHSNS
Trigger: GGAGTTGGAGTGACCGTTCAATATTTTCTGGCATTG...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GATAGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCACTAGTGCTTATGGTACTTGGGAAGAGCTCTaGTCAGAATCACTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: DRLAIFDEYFGWITSAYGTWEEL*SESLFD
Trigger: ATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGT...ACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp ACTTGTTATATAGTCTGTACTTGCAGTATGCGCAGGCAGGCTACTAAGTTTCTCGGACTCTCTCAACTGTaGTTTGCTCAATTGTCGGTA +
Preference number: 5 (lower is better)
Translates to: TCYIVCTCSMRRQATKFLGLSQL*FAQLSV
Trigger: TACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC...GAGAAACTTAGTAGCCTGCCTGCGCATACTGCAAGTACAGACTATATAACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAATGGGGGTCTCTCTATaGCTCAGGATGGTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTMGVSL*LRMVSN
Trigger: GTTTGAAACCATCCTGAGCAATAGAGAGACCCCCAT...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCAGCACTGAATAGCCTTCCAAATTTCTGCTCAGCTGGAAGAACACTTGATCTCGATCTCAAAAATGCTTaGGTGCAGGAGATACACAAT +
Preference number: 5 (lower is better)
Translates to: AALNSLPNFCSAGRTLDLDLKNA*VQEIHN
Trigger: ATTGTGTATCTCCTGCACCAAAGCATTTTTGAGATC...GAGATCAAGTGTTCTTCCAGCTGAGCAGAAATTTGGAAGGCTATTCAGTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTCTTCGTCTACCCAATaGCCCCACTCTTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSSSTQ*PHSSAG
Trigger: ACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp GAAGAGCTCTTGTCAGAATCACTTTTTGATAAGATTACAGATGGCTCGGTAGAAATAGGCTGGCTATTTTaGACGAGTACTTCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: EELLSESLFDKITDGSVEIGWLF*TSTSAG
Trigger: TCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT...TTCTACCGAGCCATCTGTAATCTTATCAAAAAGTGATTCTGACAAGAGCTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTCTGTCTCTTGTAGTATaGGCGGCACTTGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTLSLVV*AALGKS
Trigger: GCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAG...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp ATAGGCTGGCTATTTTTGACGAGTACTTCGGCTGGATCACTAGTGCTTATGGTCGGCACACTATTTTGCTaGGTATTTGACTTGGATTTA +
Preference number: 5 (lower is better)
Translates to: IGWLFLTSTSAGSLVLMVGTLFC*VFDLDL
Trigger: TAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCC...GACCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTAGTGCTTTCTGAGTaGATGATGGAAACCAGTTCC +
Preference number: 5 (lower is better)
Translates to: STLTDTVRGAHYPILIFLLVLSE*MMETSS
Trigger: GGAACTGGTTTCCATCATCAACTCAGAAAGCACTAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGATGCAAATGACATATaGCACCTGGTGGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLDANDI*HLVAGS
Trigger: GCTGCCTGCCACCAGGTGCAATATGTCATTTGCATC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACAATCATCGATATAGGGTaGATTACGGCTAACATCCCA +
Preference number: 5 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTIIDIG*ITANIP
Trigger: TGGGATGTTAGCCGTAATCAACCCTATATCGATGAT...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTATTTGATCATCAGGAATaGGTTCCTGGGACTTTAGAA +
Preference number: 5 (lower is better)
Translates to: STLTDTVRGAHYPILIFLFDHQE*VPGTLE
Trigger: TTCTAAAGTCCCAGGAACCAATTCCTGATGATCAAA...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTTTGGATTTCCCAGTaGGAAGAGCTCCCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTFWISQ*EELPLP
Trigger: AGGGAGAGGGAGCTCTTCCAACTGGGAAATCCAAAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp GGACTCTCTCAACTGTTGTTTGCTCAATTGTCGGTACAGATAGGTAGGATTCCATGCTTGGTATTTGACTaGGATTTATCTGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: GLSQLLFAQLSVQIGRIPCLVFD*DLSVSC
Trigger: ACAAGAGACAGATAAATCCAAGTCAAATACCAAGCA...TGGAATCCTACCTATCTGTACCGACAATTGAGCAAACAACAGTTGAGAGAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TTGGATTTATCTGTCTCTTGTAGTATTGGCGGCACTTGGGAAGAGCTCTTGTCATGCTTGGTATTTGACTaGGATTTATCTGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: LDLSVSCSIGGTWEELLSCLVFD*DLSVSC
Trigger: ACAAGAGACAGATAAATCCAAGTCAAATACCAAGCA...TGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACAAGAGACAGATAAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519293.1
CDS-3UTR CAA 90 bp TCAACTCTGACAGACACTGTTAGAGGTGCCCATTATCCAATTCTCATCTTCCTAGATAGATCAGTACCATaGGTTACAGCTGTTAAACAG +
Preference number: 5 (lower is better)
Translates to: STLTDTVRGAHYPILIFLDRSVP*VTAVKQ
Trigger: CTGTTTAACAGCTGTAACCAATGGTACTGATCTATC...TAGGAAGATGAGAATTGGATAATGGGCACCTCTAACAGTGTCTGTCAGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp AATGGGGAGATACTAGGCTGCAGAAATAAAATCCAACGTTTGACAAAGCCAACACAGCTGGAAGAACACTaGATCTCAAAAATGCTTTGG +
Preference number: 5 (lower is better)
Translates to: NGEILGCRNKIQRLTKPTQLEEH*ISKMLW
Trigger: CCAAAGCATTTTTGAGATCAAGTGTTCTTCCAGCTG...TGTTGGCTTTGTCAAACGTTGGATTTTATTTCTGCAGCCTAGTATCTCCCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLAFQSE*GSAEDR
Trigger: TCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKAFQSE*GSAEDR
Trigger: TCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTATAGGCTGGCTATTTTaGACGAGTACTTCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTIGWLF*TSTSAG
Trigger: TCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTAT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGCAGGTGGAAGAGTCTaGATAGGCTGGCTATTTTTG +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKAGGRV*IGWLFL
Trigger: CAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAATCTTGTACAAGCAATaGCTGTTTGGGGACACAGCC +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLILYKQ*LFGDTA
Trigger: GGCTGTGTCCCCAAACAGCAATTGCTTGTACAAGAT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACTTTGCTGTTACACTTaGAGGTGTTCGAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKLCCYT*RCSNSF
Trigger: GAAGCTGTTCGAACACCTCAAAGTGTAACAGCAAAG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAACAATGCCAGAAAATATaGAACGGTCACTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKQCQKI*NGHSNS
Trigger: GGAGTTGGAGTGACCGTTCAATATTTTCTGGCATTG...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTACTGTTGTTTGCTCAATaGTCGGTACAGATAGGTAGG +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLLLFAQ*SVQIGR
Trigger: CCTACCTATCTGTACCGACAATTGAGCAAACAACAG...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTATCTCTCAACTGTTGTTaGCTCAATTGTCGGTACAGA +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLSLNCC*LNCRYR
Trigger: TCTGTACCGACAATTGAGCAAACAACAGTTGAGAGA...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTACATATGGGCTCTGGATaGCCTTCCCAAACTTTAATA +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLHMGSG*PSQTLI
Trigger: TATTAAAGTTTGGGAAGGCAATCCAGAGCCCATATG...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTTTGATCATCAGGAATaGGTTCCTGGGACTTTAGAA +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTFDHQE*VPGTLE
Trigger: TTCTAAAGTCCCAGGAACCAATTCCTGATGATCAAA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAACTTGGGAAGAGCTCTaGTCAGAATCACTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLTWEEL*SESLFD
Trigger: ATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGT...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAACTTGGGAAGAGCTCTaGTCAGAATCACTTTTTGAT +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKTWEEL*SESLFD
Trigger: ATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGT...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTACCTTGTCAAACACGTTaGGTAAAGGCTATTTACAGT +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLPCQTR*VKAIYS
Trigger: ACTGTAAATAGCCTTTACCAAACGTGTTTGACAAGG...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp GCACAATCTGTTGTAAACAGGGCACTGTTGTTAAACCAGGATAATATTCTTAAAGAAAGTAATTCCAGTTaGTGCAGTGAGTTTACAGGA +
Preference number: 5 (lower is better)
Translates to: AQSVVNRALLLNQDNILKESNSS*CSEFTG
Trigger: TCCTGTAAACTCACTGCACAAACTGGAATTACTTTC...TTTAAGAATATTATCCTGGTTTAACAACAGTGCCCTGTTTACAACAGATTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTTGCTTGGTATTTGACTaGGATTTATCTGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTCLVFD*DLSVSC
Trigger: ACAAGAGACAGATAAATCCAAGTCAAATACCAAGCA...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TATATACATGTCATGATGCTAGGGTTAGAAATCATCGTCCTGTTAGAGTACTTAGGCACACTATTTTGCTaGGTATTTGACTTGGATTTA +
Preference number: 5 (lower is better)
Translates to: YIHVMMLGLEIIVLLEYLGTLFC*VFDLDL
Trigger: TAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCC...TAAGTACTCTAACAGGACGATGATTTCTAACCCTAGCATCATGACATGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGGCACACTATTTTGCTaGGTATTTGACTTGGATTTA +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTGTLFC*VFDLDL
Trigger: TAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000519934.5
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTATCTCCTTCAAGAAATaGATGCATATTCTACGCACT +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTISFKK*MHILRT
Trigger: AGTGCGTAGAATATGCATCAATTTCTTGAAGGAGAT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTAGTTCAATTATATTGTaGAGCACAGACCATTTGGCA +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTSSIIL*STDHLA
Trigger: TGCCAAATGGTCTGTGCTCAACAATATAATTGAACT...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS-3UTR CAA 90 bp TGCTACCAACAAATATGTAAAGATATGGCAGGTTATGCATTTGATCAAAGCACTGAGAGTTCAATTATATaGTTGAGCACAGACCATTTG +
Preference number: 5 (lower is better)
Translates to: CYQQICKDMAGYAFDQSTESSII*LSTDHL
Trigger: CAAATGGTCTGTGCTCAACAATATAATTGAACTCTC...AGTGCTTTGATCAAATGCATAACCTGCCATATCTTTACATATTTGTTGGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS CCA 72 bp CCAGGAGACCCGGGAGGCGGGAGGGAGTGTCTCCAGTaGCGGCCGCTAAGCGGCGTCTCGGCGCCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: PGDPGGGRECLQ*RPLSGVSAPAP
Trigger: TGGCGCTGGCGCCGAGACGCCGCTTAGCGGCCGCCACTGGAGACACTCCCTCCCGCCTCCCGGGTCTCCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS GCA 72 bp CTCGGCCTGCTGGGCCAGCTCGTCCTGCCAGCTCCGTaGAGCCATCTTCCCTCCCGTCAGAGGGACTCGCAG +
Preference number: 6 (lower is better)
Translates to: LGLLGQLVLPAP*SHLPSRQRDSQ
Trigger: CTGCGAGTCCCTCTGACGGGAGGGAAGATGGCTGCACGGAGCTGGCAGGACGAGCTGGCCCAGCAGGCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS TCA 72 bp CAGCCATCTTCCCTCCCGTCAGAGGGACTCGCAGGATaGCGCCGGGGCGCGGAGACGCAGTGGAATAGTCGA +
Preference number: 6 (lower is better)
Translates to: QPSSLPSEGLAG*RRGAETQWNSR
Trigger: TCGACTATTCCACTGCGTCTCCGCGCCCCGGCGTCATCCTGCGAGTCCCTCTGACGGGAGGGAAGATGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336273.8
CDS CCA 72 bp TGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATTTAACCCAGACC +
Preference number: 6 (lower is better)
Translates to: CPTLLLVHSNQS*DQQKTDHLTQT
Trigger: GGTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000521933.1
CDS GCA 72 bp TTCTTCGTCTACCCAATTGCCCCACTCTTCTGCTGGTaGATTCCAATCAGAGTTGGGATCAGCAGAAGACAG +
Preference number: 6 (lower is better)
Translates to: FFVYPIAPLFCW*IPIRVGISRRQ
Trigger: CTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000521933.1
ENST00000522104.1
CDS CCA 72 bp TGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATCAATGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: CPTLLLVHSNQS*DQQKTDHQCQK
Trigger: TTTCTGGCATTGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519934.5
CDS CAA 72 bp TTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGACCATTTAACCCAGAC +
Preference number: 6 (lower is better)
Translates to: LPHSSAGAFQSE*GSAEDRPFNPD
Trigger: GTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000521933.1
CDS CAA 72 bp TTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGACCATCAATGCCAGAA +
Preference number: 6 (lower is better)
Translates to: LPHSSAGAFQSE*GSAEDRPSMPE
Trigger: TTCTGGCATTGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519934.5
CDS CAA 90 bp GGTTCCTGGGACTTTAGAAGTGAAGCTCTTTCTTCGTCTACCCAATaGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTGGGATCA +
Preference number: 6 (lower is better)
Translates to: GSWDFRSEALSSSTQ*PHSSAGAFQSELGS
Trigger: TGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGAAAGAGCTTCACTTCTAAAGTCCCAGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000521933.1
ENST00000522104.1
CDS CCA 72 bp TCTTTCTTCGTCTACCCAATTGCCCCACTCTTCTGCTaGTGCATTCCAATCAGAGTTGGGATCAGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: SFFVYPIAPLFC*CIPIRVGISRR
Trigger: TCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000521933.1
ENST00000522104.1
CDS CAA 90 bp TCTACCCAATTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGACCATTTAACCCAGACCATTCATCA +
Preference number: 6 (lower is better)
Translates to: STQLPHSSAGAFQSE*GSAEDRPFNPDHSS
Trigger: TGATGAATGGTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336273.8
ENST00000521933.1
CDS TCA 72 bp CAGGTGAAACGGAGTTCCACTTCTCCTCACCTGCACTaGTCTGTGAGGAGAGTTTTACAGACTTTTCATTCC +
Preference number: 6 (lower is better)
Translates to: QVKRSSTSPHLH*SVRRVLQTFHS
Trigger: GGAATGAAAAGTCTGTAAAACTCTCCTCACAGATCAGTGCAGGTGAGGAGAAGTGGAACTCCGTTTCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000522313.1
CDS CAA 72 bp GACTTTAGAAGTGAAGCTCTTTCTTCGTCTACCCAATaGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAG +
Preference number: 6 (lower is better)
Translates to: DFRSEALSSSTQ*PHSSAGAFQSE
Trigger: CTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGAAAGAGCTTCACTTCTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336273.8
ENST00000519934.5
ENST00000521933.1
ENST00000522104.1
CDS CAA 90 bp TCTACCCAATTGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTaGGGATCAGCAGAAGACAGACCATCAATGCCAGAAAATATTGAA +
Preference number: 6 (lower is better)
Translates to: STQLPHSSAGAFQSE*GSAEDRPSMPENIE
Trigger: TTCAATATTTTCTGGCATTGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519934.5
CDS CCA 72 bp TGCCCCACTCTTCTGCTGGTGCATTCCAATCAGAGTTaGGATCAGCAGAAGACAGACCATCTAAAATTTAAC +
Preference number: 6 (lower is better)
Translates to: CPTLLLVHSNQS*DQQKTDHLKFN
Trigger: GTTAAATTTTAGATGGTCTGTCTTCTGCTGATCCCAACTCTGATTGGAATGCACCAGCAGAAGAGTGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522104.1
CDS TCA 72 bp CAGTCTTTTCCATTTGTATTAGCATCTCCAGTGTCTTaGCTCCAGGCAGATGGCTCAGTTTTCCTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: QSFPFVLASPVS*LQADGSVFLFP
Trigger: AGGAAAGAGGAAAACTGAGCCATCTGCCTGGAGTCAAGACACTGGAGATGCTAATACAAATGGAAAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336273.8
ENST00000519293.1
ENST00000519934.5
ENST00000522313.1