Pregenerated sensors for MTCP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000214827Ensembl transcript IDs: ENST00000362018.2, ENST00000369476.8, ENST00000476116.1, ENST00000482244.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTAGGATATTTACAGGATGGGAGAAGGAAAGGCAGGTGAATTGCTaGAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PRIFTGWEKERQVNC*RANKRQIDVDAARS Trigger: GCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTGTAAATATCCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR GCA 90 bp | AAACCTAGGATATTTACAGGATGGGAGAAGGAAAGGCAGGTGAATTaGTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KPRIFTGWEKERQVN*CRANKRQIDVDAAR Trigger: CCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTGTAAATATCCTAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR TCA 90 bp | AAAGGAGTCAATTTCAAGTTACGGATCCTGACTAAGTGCTTTTGTTaGCTTGCTTTCTGCCTACGTAACCTCTCTCTGCAGTTTCACTTG | + |
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Preference number: 1 (lower is better) Translates to: KGVNFKLRILTKCFC*LAFCLRNLSLQFHL Trigger: CAAGTGAAACTGCAGAGAGAGGTTACGTAGGCAGAAAGCAAGTCAACAAAAGCACTTAGTCAGGATCCGTAACTTGAAATTGACTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGCCGACGGCGCAGCCTGGCTCTATCATTCGCAGAAGAAACCCTTGATAAGGCCCAAGGGTGGGTaGACTGCAGTAGTGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: RGADGAAWLYHSQKKPLIRPKGG*TAVVDE Trigger: TTCATCCACTACTGCAGTGCACCCACCCTTGGGCCT...TATCAAGGGTTTCTTCTGCGAATGATAGAGCCAGGCTGCGCCGTCGGCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGCCGACGGCGCAGCCTGGCTCTATCATTCGCAGAAGAAACCCTTGATATACGTAACCTCTCTCTaGAGTTTCACTTGCAGTATT | + |
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Preference number: 2 (lower is better) Translates to: RGADGAAWLYHSQKKPLIYVTSL*SFTCSI Trigger: AATACTGCAAGTGAAACTGCAGAGAGAGGTTACGTA...TATCAAGGGTTTCTTCTGCGAATGATAGAGCCAGGCTGCGCCGTCGGCTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTGACTTTTGTGGGATTCATCAGATCCCAGGTCCAGCCGATGATGTCCATACTAAGTGCTTTTGTTaGCTTGCTTTCTGCCTACGT | + |
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Preference number: 2 (lower is better) Translates to: GADFCGIHQIPGPADDVHTKCFC*LAFCLR Trigger: ACGTAGGCAGAAAGCAAGTCAACAAAAGCACTTAGT...ATGGACATCATCGGCTGGACCTGGGATCTGATGAATCCCACAAAAGTCAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTCATCAATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCACCCCAGGCCCAAGGGTaGGTGCACTGCAGTAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: NFINAYLFSEPSKYSADPPQAQG*VHCSSG Trigger: TCCACTACTGCAGTGCACCCACCCTTGGGCCTGGGG...TGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCATTGATGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACAAGGCAGGTGAATTGCTaGAGGGCAAATAAGCGACAA | + |
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Preference number: 2 (lower is better) Translates to: SPLNTQQIQIRSVLGWETRQVNC*RANKRQ Trigger: TTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCT...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGCTGCTCTTTGCAGTATTCTTCATaGCCCTTGCTAAACTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CCRANKRQIDVDAARSCSLQYSS*PLLNFC Trigger: ACAGAAGTTTAGCAAGGGTCATGAAGAATACTGCAA...AGAGCAGCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR GCA 90 bp | TACCAAGTCCTTGGTGATCAGGGCATCTGTTCTGTAGAAGGTGCTGACTTTTGTCTCTGCAGTTTCACTTaGAGTATTCTTCATGACCCT | + |
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Preference number: 2 (lower is better) Translates to: YQVLGDQGICSVEGADFCLCSFT*SILHDP Trigger: AGGGTCATGAAGAATACTGCAAGTGAAACTGCAGAG...ACAAAAGTCAGCACCTTCTACAGAACAGATGCCCTGATCACCAAGGACTTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACATTCTGTAGAAGGTGCTaGCTTTTGTGGGATTCATCA | + |
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Preference number: 2 (lower is better) Translates to: SPLNTQQIQIRSVLGWETFCRRC*LLWDSS Trigger: TGATGAATCCCACAAAAGTCAGCACCTTCTACAGAA...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGTCCTTGGTGATCAGGGCATCTGTTCTGTAGAAGGTGCTGACTTTTGTCCATTAAGGGTTCTATaGCAATTTCCAAAGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: YQVLGDQGICSVEGADFCPLRVL*QFPKES Trigger: TGACTCCTTTGGAAATTGCCATAGAACCCTTAATGG...ACAAAAGTCAGCACCTTCTACAGAACAGATGCCCTGATCACCAAGGACTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCATCAAGTTACGGATCCTaGCTAAGTGCTTTTGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: MHISFQSPLNTQQIQIRSSSYGS*LSAFVD Trigger: GTCAACAAAAGCACTTAGTCAGGATCCGTAACTTGA...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR TCA 72 bp | CCCCAGGCCCAAGGGTGGGTGCACTGCAGTAGTGGATaGAGTGATTGCCAAATACTGAACAGAACAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PQAQGWVHCSSG*SDCQILNRTKE Trigger: CTCCTTTGTTCTGTTCAGTATTTGGCAATCACTTCATCCACTACTGCAGTGCACCCACCCTTGGGCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGTACTGGGATGGGAAACACTGGAGCAAAACCTAGGATATTTACAGGATGGGAGTGCTTTTGTTGACTaGCTTTCTGCCTACGTAACC | + |
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Preference number: 3 (lower is better) Translates to: SVLGWETLEQNLGYLQDGSAFVD*LSAYVT Trigger: GGTTACGTAGGCAGAAAGCAAGTCAACAAAAGCACT...CCCATCCTGTAAATATCCTAGGTTTTGCTCCAGTGTTTCCCATCCCAGTACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR GCA 72 bp | TTTGTTGACTTGCTTTCTGCCTACGTAACCTCTCTCTaGAGTTTCACTTGCAGTATTCTTCATGACCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: FVDLLSAYVTSL*SFTCSILHDPC Trigger: GCAAGGGTCATGAAGAATACTGCAAGTGAAACTGCAGAGAGAGGTTACGTAGGCAGAAAGCAAGTCAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR GCA 72 bp | TTTACAGGATGGGAGAAGGAAAGGCAGGTGAATTGCTaGAGGGCAAATAAGCGACAAATAGATGTTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: FTGWEKERQVNC*RANKRQIDVDA Trigger: AGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR GCA 72 bp | ATATTTACAGGATGGGAGAAGGAAAGGCAGGTGAATTaGTGCAGGGCAAATAAGCGACAAATAGATGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: IFTGWEKERQVN*CRANKRQIDVD Trigger: ATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCTTTCCTTCTCCCATCCTGTAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR CCA 72 bp | AATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATaGGAAACACTGGAGCAAAACCTAGGATATTTACAG | + |
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Preference number: 3 (lower is better) Translates to: NTQQIQIRSVLG*ETLEQNLGYLQ Trigger: CTGTAAATATCCTAGGTTTTGCTCCAGTGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR TCA 72 bp | CAATTTCCAAAGGAGTCAATTTCAAGTTACGGATCCTaGCTAAGTGCTTTTGTTGACTTGCTTTCTGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: QFPKESISSYGS*LSAFVDLLSAY Trigger: GTAGGCAGAAAGCAAGTCAACAAAAGCACTTAGTCAGGATCCGTAACTTGAAATTGACTCCTTTGGAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| 3UTR-3UTR CAA 90 bp | AATTTCATCAATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCACTAAACTTCTGTTTCTaGAGCAGTTTTTCAACCCAC | + |
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Preference number: 3 (lower is better) Translates to: NFINAYLFSEPSKYSADPLNFCF*SSFSTH Trigger: GTGGGTTGAAAAACTGCTCAAGAAACAGAAGTTTAG...TGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCATTGATGAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | GGTGCTGACTTTTGTGGGATTCATCAGATCCCAGGTCCAGCCGATGATGTCCATCCAGAGGTGATCGGGTaGAGCCCCCACATCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GADFCGIHQIPGPADDVHPEVIG*SPHILS Trigger: GGAGAGGATGTGGGGGCTCCACCCGATCACCTCTGG...ATGGACATCATCGGCTGGACCTGGGATCTGATGAATCCCACAAAAGTCAGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTAAATCAGTACCAAGTCCTTGGTGATCAGGGCATCTGTTCTGTAGAAAGCGGGCGGGCAAAATaGGCGCCGGTACTCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLNQYQVLGDQGICSVESGRAK*APVLGR Trigger: CCTCCCGAGTACCGGCGCCCATTTTGCCCGCCCGCT...TTCTACAGAACAGATGCCCTGATCACCAAGGACTTGGTACTGATTTAGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | TGCTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGCTGCTCTGCCGGCAACCGGAAGTaGTCCAGGGAGAGTTGTACG | + |
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Preference number: 4 (lower is better) Translates to: CCRANKRQIDVDAARSCSAGNRK*SRESCT Trigger: CGTACAACTCTCCCTGGACCACTTCCGGTTGCCGGC...AGAGCAGCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | TGCTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGCTGCTCTAGGCCCAAGGGTGGGTaGACTGCAGTAGTGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: CCRANKRQIDVDAARSCSRPKGG*TAVVDE Trigger: TTCATCCACTACTGCAGTGCACCCACCCTTGGGCCT...AGAGCAGCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | TACCAAGTCCTTGGTGATCAGGGCATCTGTTCTGTAGAAGGTGCTGACTTTTGTCCCCACATCCTCTCCTaGCATTCTGGGCTTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: YQVLGDQGICSVEGADFCPHILS*HSGLWV Trigger: AACCCAAAGCCCAGAATGGCAGGAGAGGATGTGGGG...ACAAAAGTCAGCACCTTCTACAGAACAGATGCCCTGATCACCAAGGACTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCACGACGGCCACCCACGTaGGCTGGTATTCGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: MHISFQSPLNTQQIQIRSRRPPT*AGIRRG Trigger: ACCGCGACGAATACCAGCGCACGTGGGTGGCCGTCG...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | AAGACTTTAAAGCCCCTCTACGTGGAATTTTCTTCTGAGACAAGCAGTATATGCAAAAGAGCGTCCCCCTaGCTCAAGAGGCCGGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: KTLKPLYVEFSSETSSICKRASP*LKRPAF Trigger: GAACGCCGGCCTCTTGAGCCAGGGGGACGCTCTTTT...GCATATACTGCTTGTCTCAGAAGAAAATTCCACGTAGAGGGGCTTTAAAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCACCCCAGGCCCAAGGGTaGGTGCACTGCAGTAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: MHISFQSPLNTQQIQIRSPQAQG*VHCSSG Trigger: TCCACTACTGCAGTGCACCCACCCTTGGGCCTGGGG...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | TGCTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGCTGCTCTAGGCAGGTGAATTGCTaGAGGGCAAATAAGCGACAA | + |
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Preference number: 4 (lower is better) Translates to: CCRANKRQIDVDAARSCSRQVNC*RANKRQ Trigger: TTGTCGCTTATTTGCCCTGCAGCAATTCACCTGCCT...AGAGCAGCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | AAGACTTTAAAGCCCCTCTACGTGGAATTTTCTTCTGAGACAAGCAGTATATGCTGGGAGGTAAGAAGGTaGCTTGGCCTAGCTGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: KTLKPLYVEFSSETSSICWEVRR*LGLAAS Trigger: TGACGCAGCTAGGCCAAGTCACCTTCTTACCTCCCA...GCATATACTGCTTGTCTCAGAAGAAAATTCCACGTAGAGGGGCTTTAAAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCGACGGCGCAGCCTGGCTCTATCATTCGCAGAAGAAACCCTTGATAGGAATCAGCAATATTTaGTGTTATTACTTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGADGAAWLYHSQKKPLIGISNI*CYYFLR Trigger: TCTCAGGAAGTAATAACACCAAATATTGCTGATTCC...TATCAAGGGTTTCTTCTGCGAATGATAGAGCCAGGCTGCGCCGTCGGCTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACACCCCTGACCATTAAATaGTGCTGTATCTGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: SPLNTQQIQIRSVLGWETPLTIK*CCICHK Trigger: CTTGTGGCAGATACAGCATCATTTAATGGTCAGGGG...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | TCAGTACTGGGATGGGAAACACTGGAGCAAAACCTAGGATATTTACAGGATGGGGGTGTTATTACTTCCTaGGAAAGGTGCCAGTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: SVLGWETLEQNLGYLQDGGVITS*ERCQLS Trigger: GCTTAACTGGCACCTTTCTCAGGAAGTAATAACACC...CCCATCCTGTAAATATCCTAGGTTTTGCTCCAGTGTTTCCCATCCCAGTACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | CAGATCCAAATTAGGTCAGTACTGGGATGGGAAACACTGGAGCAAAACCTAGGACGTGGAATTTTCTTCTaGGACAAGCAGTATATGCCC | + |
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Preference number: 4 (lower is better) Translates to: QIQIRSVLGWETLEQNLGRGIFF*DKQYMP Trigger: GGGCATATACTGCTTGTCTCAGAAGAAAATTCCACG...TCCTAGGTTTTGCTCCAGTGTTTCCCATCCCAGTACTGACCTAATTTGGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACAAGGTCAGTACTGGGATaGGAAACACTGGAGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPLNTQQIQIRSVLGWETRSVLG*ETLEQN Trigger: GTTTTGCTCCAGTGTTTCCCATCCCAGTACTGACCT...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCATCACCTAAGGGAACCTaGATTTGCTGGACTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: MHISFQSPLNTQQIQIRSSPKGT*ICWTRA Trigger: GGCACGAGTCCAGCAAATTCAGGTTCCCTTAGGTGA...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | TACCAAGTCCTTGGTGATCAGGGCATCTGTTCTGTAGAAGGTGCTGACTTTTGTAAGAGCCCACAATTTTaGTCAGCAACTTCCAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: YQVLGDQGICSVEGADFCKSPQF*SATSSN Trigger: ATTACTGGAAGTTGCTGATCAAAATTGTGGGCTCTT...ACAAAAGTCAGCACCTTCTACAGAACAGATGCCCTGATCACCAAGGACTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACACTCTGCAGTTTCACTTaGAGTATTCTTCATGACCCT | + |
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Preference number: 4 (lower is better) Translates to: SPLNTQQIQIRSVLGWETLCSFT*SILHDP Trigger: AGGGTCATGAAGAATACTGCAAGTGAAACTGCAGAG...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCACCTCTCCTGCCATTCTaGGCTTTGGGTTCCAATTCT | + |
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Preference number: 4 (lower is better) Translates to: MHISFQSPLNTQQIQIRSPLLPF*ALGSNS Trigger: AGAATTGGAACCCAAAGCCCAGAATGGCAGGAGAGG...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR GCA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACATACGTAACCTCTCTCTaGAGTTTCACTTGCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: SPLNTQQIQIRSVLGWETYVTSL*SFTCSI Trigger: AATACTGCAAGTGAAACTGCAGAGAGAGGTTACGTA...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CCA 90 bp | AATTTCATCAATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCACCATTAAGGGTTCTATaGCAATTTCCAAAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NFINAYLFSEPSKYSADPPLRVL*QFPKES Trigger: TGACTCCTTTGGAAATTGCCATAGAACCCTTAATGG...TGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCATTGATGAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR TCA 90 bp | AATTTCATCAATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCATCTGTAATCAGAGAATaGATTCAAGAGCCCACAATT | + |
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Preference number: 4 (lower is better) Translates to: NFINAYLFSEPSKYSADPSVIRE*IQEPTI Trigger: AATTGTGGGCTCTTGAATTCATTCTCTGATTACAGA...TGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCATTGATGAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS TCA 90 bp | CTTCCAGGTCTCCCACCCTGGGCCACTCAAGCCAGGATCGCGACGTaGGCCCGGGGTGAGCCGAGGGGCATCCCGGGCCGAGGTCACTCG | + |
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Preference number: 5 (lower is better) Translates to: LPGLPPWATQARIAT*ARGEPRGIPGRGHS Trigger: CGAGTGACCTCGGCCCGGGATGCCCCTCGGCTCACCCCGGGCTCACGTCGCGATCCTGGCTTGAGTGGCCCAGGGTGGGAGACCTGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369476.8 ENST00000482244.5 |
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| CDS TCA 90 bp | CCCACCCTGGGCCACTCAAGCCAGGATCGCGACGTGAGCCCGGGGTaGGCCGAGGGGCATCCCGGGCCGAGGTCACTCGAACCGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PTLGHSSQDRDVSPG*AEGHPGPRSLEPKL Trigger: TAACTTCGGTTCGAGTGACCTCGGCCCGGGATGCCCCTCGGCTCACCCCGGGCTCACGTCGCGATCCTGGCTTGAGTGGCCCAGGGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369476.8 ENST00000482244.5 |
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| CDS GCA 90 bp | GTGCCCTTAGGAAACTCGTCTCCTCTTCCACGACGGCCACCCACGTaGGCTGGTATTCGTCGCGGTAGATACCCTCTTGGTGAACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VPLGNSSPLPRRPPT*AGIRRGRYPLGEPR Trigger: TCTGGGTTCACCAAGAGGGTATCTACCGCGACGAATACCAGCGCACGTGGGTGGCCGTCGTGGAAGAGGAGACGAGTTTCCTAAGGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS CCA 90 bp | CCCAGAGGTGATCGGGTGGAGCCCCCACATCCTCTCCTGCCATTCTaGGCTTTGGGTTCCAATTCTAGCCCTGCTTTTCTCCACCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: PRGDRVEPPHPLLPF*ALGSNSSPAFLHLS Trigger: GCTTAGGTGGAGAAAAGCAGGGCTAGAATTGGAACCCAAAGCCCAGAATGGCAGGAGAGGATGTGGGGGCTCCACCCGATCACCTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS GCA 90 bp | TTGGTGAACCCAGAGGTGATCGGGTGGAGCCCCCACATCCTCTCCTaGCATTCTGGGCTTTGGGTTCCAATTCTAGCCCTGCTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LVNPEVIGWSPHILS*HSGLWVPILALLFS Trigger: GGAGAAAAGCAGGGCTAGAATTGGAACCCAAAGCCCAGAATGGCAGGAGAGGATGTGGGGGCTCCACCCGATCACCTCTGGGTTCACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS-3UTR CAA 90 bp | GGTGCTGACTTTTGTGGGATTCATCAGATCCCAGGTCCAGCCGATGATGTCCATCTGCCATTCTGGGCTTaGGGTTCCAATTCTAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GADFCGIHQIPGPADDVHLPFWA*GSNSSP Trigger: AGGGCTAGAATTGGAACCCAAAGCCCAGAATGGCAG...ATGGACATCATCGGCTGGACCTGGGATCTGATGAATCCCACAAAAGTCAGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CAA 90 bp | TCAGTACTGGGATGGGAAACACTGGAGCAAAACCTAGGATATTTACAGGATGGGGCGGTAGATACCCTCTaGGTGAACCCAGAGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: SVLGWETLEQNLGYLQDGAVDTL*VNPEVI Trigger: GATCACCTCTGGGTTCACCAAGAGGGTATCTACCGC...CCCATCCTGTAAATATCCTAGGTTTTGCTCCAGTGTTTCCCATCCCAGTACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS GCA 90 bp | AGCCTCAGCTCTGGTCTTCCTGAGATCAAAAATGAAGTAGATGGTTaGAGGAGAGCCTGCAAAAGGCAGGCAGGGATCTTGTTGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: SLSSGLPEIKNEVDG*RRACKRQAGILLVN Trigger: GTTTACCAACAAGATCCCTGCCTGCCTTTTGCAGGCTCTCCTGCAACCATCTACTTCATTTTTGATCTCAGGAAGACCAGAGCTGAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000362018.2 |
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| CDS GCA 90 bp | CTCCTCAGCTCTGGTCTTCCTGAGATCAAAAATGAAGTAGATGGTTaGAGGAGAGCCTGCAAAAGGCAGGCAGGGATCTTGTTGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: LLSSGLPEIKNEVDG*RRACKRQAGILLVN Trigger: GTTTACCAACAAGATCCCTGCCTGCCTTTTGCAGGCTCTCCTGCAACCATCTACTTCATTTTTGATCTCAGGAAGACCAGAGCTGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476116.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCAGGGCAAATAAGCGACAAATAGATGTTGATGCTGCTAGGAGCTGCTCTACCTACCTCAAAGCATaGACAGGAGGATTAAATGTG | + |
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Preference number: 5 (lower is better) Translates to: CCRANKRQIDVDAARSCSTYLKA*TGGLNV Trigger: CACATTTAATCCTCCTGTCAATGCTTTGAGGTAGGT...AGAGCAGCTCCTAGCAGCATCAACATCTATTTGTCGCTTATTTGCCCTGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CAA 90 bp | AGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGTACTGGGATGGGAAACAAGGAATCAGCAATATTaGGTGTTATTACTTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SPLNTQQIQIRSVLGWETRNQQY*VLLLPE Trigger: CTCAGGAAGTAATAACACCAAATATTGCTGATTCCT...TGTTTCCCATCCCAGTACTGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS-3UTR CAA 90 bp | ATGCATATCTCTTTTCAGAGCCCTCTAAATACTCAGCAGATCCAAATTAGGTCAGCAACTTCCAGTAATTaGAAGACACGATTTCAGATA | + |
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Preference number: 5 (lower is better) Translates to: MHISFQSPLNTQQIQIRSATSSN*KTRFQI Trigger: TATCTGAAATCGTGTCTTCAAATTACTGGAAGTTGC...TGACCTAATTTGGATCTGCTGAGTATTTAGAGGGCTCTGAAAAGAGATATGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369476.8 |
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| CDS CCA 72 bp | AGGCCGCGCACGGGTCTCCTTAGCGGGCGGGCAAAATaGGCGCCGGTACTCGGGAGGCGCCTGCCCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPRTGLLSGRAK*APVLGRRLPRR Trigger: GCGCCTGGGCAGGCGCCTCCCGAGTACCGGCGCCCATTTTGCCCGCCCGCTAAGGAGACCCGTGCGCGGCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369476.8 ENST00000482244.5 |
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| CDS CAA 90 bp | GACGGCCACCCACGTGCGCTGGTATTCGTCGCGGTAGATACCCTCTaGGTGAACCCAGAGGTGATCGGGTGGAGCCCCCACATCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DGHPRALVFVAVDTL*VNPEVIGWSPHILS Trigger: GGAGAGGATGTGGGGGCTCCACCCGATCACCTCTGGGTTCACCAAGAGGGTATCTACCGCGACGAATACCAGCGCACGTGGGTGGCCGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS CAA 72 bp | CCACGTGCGCTGGTATTCGTCGCGGTAGATACCCTCTaGGTGAACCCAGAGGTGATCGGGTGGAGCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRALVFVAVDTL*VNPEVIGWSPH Trigger: GTGGGGGCTCCACCCGATCACCTCTGGGTTCACCAAGAGGGTATCTACCGCGACGAATACCAGCGCACGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS CCA 72 bp | AACCGAAGTTATGAGGCGCGGGCCGGCAACCGGAAGTaGTCCAGGGAGAGTTGTACGAGATTCGGGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: NRSYEARAGNRK*SRESCTRFGGC Trigger: ACAGCCCCCGAATCTCGTACAACTCTCCCTGGACCACTTCCGGTTGCCGGCCCGCGCCTCATAACTTCGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000369476.8 ENST00000482244.5 |
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| CDS GCA 72 bp | CCAGAGGTGATCGGGTGGAGCCCCCACATCCTCTCCTaGCATTCTGGGCTTTGGGTTCCAATTCTAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PEVIGWSPHILS*HSGLWVPILAL Trigger: CAGGGCTAGAATTGGAACCCAAAGCCCAGAATGGCAGGAGAGGATGTGGGGGCTCCACCCGATCACCTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS GCA 72 bp | GGAAACTCGTCTCCTCTTCCACGACGGCCACCCACGTaGGCTGGTATTCGTCGCGGTAGATACCCTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GNSSPLPRRPPT*AGIRRGRYPLG Trigger: ACCAAGAGGGTATCTACCGCGACGAATACCAGCGCACGTGGGTGGCCGTCGTGGAAGAGGAGACGAGTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000362018.2 ENST00000369476.8 |
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| CDS CAA 90 bp | GTAGATGGTTGCAGGAGAGCCTGCAAAAGGCAGGCAGGGATCTTGTaGGTAAACTTTCATGCAGATTCATTCCTTTGTAAATCAACCCTT | + |
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Preference number: 6 (lower is better) Translates to: VDGCRRACKRQAGIL*VNFHADSFLCKSTL Trigger: AAGGGTTGATTTACAAAGGAATGAATCTGCATGAAAGTTTACCAACAAGATCCCTGCCTGCCTTTTGCAGGCTCTCCTGCAACCATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476116.1 |
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