Pregenerated sensors for MTCH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137409Ensembl transcript IDs: ENST00000373616.9, ENST00000373627.10, ENST00000418541.6, ENST00000460219.2, ENST00000471737.1, ENST00000492754.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTaGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGG | + |
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Preference number: 1 (lower is better) Translates to: SYGEVASVQNTRTQG*YCCQFPTWPSPTHR Trigger: CCTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CCA 90 bp | GTTTCCAATGCCAGCCGCCCTAACAACCCAGGAACTCAGCTCAACTaGTTACAGACCTCGAATTTTCAGCCCATGTTACTTGAAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSNASRPNNPGTQLN*LQTSNFQPMLLEGE Trigger: TTCTCCTTCAAGTAACATGGGCTGAAAATTCGAGGTCTGTAACCAGTTGAGCTGAGTTCCTGGGTTGTTAGGGCGGCTGGCATTGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACCCCTGACTGCTGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTCAAGGTTGGTACTGCTaGCAGTTCCCCACGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: WTPDCWAQELQLRRGSFGQGWYC*QFPTWP Trigger: GGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTG...ACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CAA 90 bp | CAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTaGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QLRRGSFGTEHENPR*VLLPVPHVAQPHPQ Trigger: CTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACACGAGAACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGACCCACAGGCTCTCCTaGGCCCAGGAATGTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TEHENPRLVLLPVPHVAQTHRLS*AQECPA Trigger: TGCAGGACATTCCTGGGCCCAGGAGAGCCTGTGGGT...CTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGCCCTAACAACCCAGGATCAGCCCATGTTACTTaGAGGAGAAGCAGTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SCRREESVSNASRPNNPGSAHVT*RRSSSW Trigger: CCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGA...TCCTGGGTTGTTAGGGCGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCGCCCTAACAACCCAGGAACTCAGCTCAACTGGTTACAGACCTCGAATTTTTTACCACCTGCCACCTaGGCCAGAGTTCTCTTATCC | + |
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Preference number: 2 (lower is better) Translates to: SRPNNPGTQLNWLQTSNFLPPAT*ARVLLS Trigger: GGATAAGAGAACTCTGGCCCAGGTGGCAGGTGGTAA...AAAATTCGAGGTCTGTAACCAGTTGAGCTGAGTTCCTGGGTTGTTAGGGCGGCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CAA 90 bp | AGACCTCGAATTTTCAGCCCATGTTACTTGAAGGAGAAGCAGTTCTaGGGCTTTACCACCTGCCACCTGGGCCAGAGTTCTCTTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: RPRIFSPCYLKEKQF*GFTTCHLGQSSLIL Trigger: AAGGATAAGAGAACTCTGGCCCAGGTGGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAAAATTCGAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR GCA 72 bp | GCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACTaGTGCCAGTTCCCCACGTGGCCCAGCCCCACCCAC | + |
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Preference number: 3 (lower is better) Translates to: ASVQNTRTQGWY*CQFPTWPSPTH Trigger: GTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CCA 72 bp | GAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTaGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: EVASVQNTRTQG*YCCQFPTWPSP Trigger: GGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CCA 72 bp | GCCAGCCGCCCTAACAACCCAGGAACTCAGCTCAACTaGTTACAGACCTCGAATTTTCAGCCCATGTTACTT | + |
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Preference number: 3 (lower is better) Translates to: ASRPNNPGTQLN*LQTSNFQPMLL Trigger: AAGTAACATGGGCTGAAAATTCGAGGTCTGTAACCAGTTGAGCTGAGTTCCTGGGTTGTTAGGGCGGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR TCA 72 bp | CTGGTTACAGACCTCGAATTTTCAGCCCATGTTACTTaGAGGAGAAGCAGTTCTTGGGCTTTACCACCTGCC | + |
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Preference number: 3 (lower is better) Translates to: LVTDLEFSAHVT*RRSSSWALPPA Trigger: GGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAAAATTCGAGGTCTGTAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCCAGGAATGTCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGGCCGCAGGCCGAGGGTaGCGAGGATGTGCGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PGPRNVLQEGGVGFQCQPAAGRG*RGCARC Trigger: GCACCGCGCACATCCTCGCCACCCTCGGCCTGCGGC...CGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGACATTCCTGGGCCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | TGGACCCCTGACTGCTGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTGCGGTGCGCGGGCGGTaGATCGCGAGCTCGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: WTPDCWAQELQLRRGSFGAVRGR*IASSSL Trigger: GAGGCTCGAGCTCGCGATCCACCGCCCGCGCACCGC...ACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | TGGACCCCTGACTGCTGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTCGAGGATGTGCGCGGTaGGCGGGCGGTGGATCGCGA | + |
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Preference number: 4 (lower is better) Translates to: WTPDCWAQELQLRRGSFGRGCAR*AGGGSR Trigger: TCGCGATCCACCGCCCGCGCACCGCGCACATCCTCG...ACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGCCCTAACAACCCAGGAAGGGTGGCGAGGATGTaGGCGGTGCGCGGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCRREESVSNASRPNNPGRVARM*AVRGRW Trigger: CCACCGCCCGCGCACCGCGCACATCCTCGCCACCCT...TCCTGGGTTGTTAGGGCGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | AACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGGCCTCCGCCGTCCAGTaGTTGCTCACCTGCACACTC | + |
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Preference number: 4 (lower is better) Translates to: NPRLVLLPVPHVAQPHPQASAVQ*LLTCTL Trigger: GAGTGTGCAGGTGAGCAAGCACTGGACGGCGGAGGC...CTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | ACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGGCAAGGTTGGTACTGCTaGCAGTTCCCCACGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TQGWYCCQFPTWPSPTHRQGWYC*QFPTWP Trigger: GGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTG...CCTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCAGGAATGTCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCACGCCCGCGCCCAGTaGCACGAAAAGAGCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLGPGMSCRREESVSNASHARAQ*HEKSLS Trigger: ACTGAGGCTCTTTTCGTGGCACTGGGCGCGGGCGTG...GCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGACATTCCTGGGCCCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | AACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGCATTGGTCCCAAGGGTaGGGGGCATCGGCTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: NPRLVLLPVPHVAQPHPQHWSQG*GASAHD Trigger: GTCATGAGCCGATGCCCCCCACCCTTGGGACCAATG...CTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | TGGACCCCTGACTGCTGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTCGGATGGCCAGGGCCTaGCTGAAGCTGTCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: WTPDCWAQELQLRRGSFGRMARA*LKLSST Trigger: GGTGGATGACAGCTTCAGCCAGGCCCTGGCCATCCG...ACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | CAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACTGAGAGCAGGGGATGGCTaGGCGCCGTCACGCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: QLRRGSFGTEHENPRLVLRAGDG*APSRPR Trigger: GCGCGGGCGTGACGGCGCTCAGCCATCCCCTGCTCT...CAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTAACCCGCCATCCATCCTaGGGGCCGAGGGCTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LQLRRGSFGTEHENPRLVTRHPS*GPRAEP Trigger: CGGCTCAGCCCTCGGCCCGCAGGATGGATGGCGGGT...TACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGCCCTAACAACCCAGGAATGGACCCCTGACTGCTaGGCCCAAGAGCTCCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PAGGRSRFPMPAALTTQEWTPDC*AQELQL Trigger: TAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA...TTCCTGGGTTGTTAGGGCGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | GGTACAGAACACGAGAACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCGGCCCAGGAATGTCCTaGAGGAGGGAGGAGTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: GTEHENPRLVLLPVPHVAGPGMS*RREESV Trigger: AACCGACTCCTCCCTCCTGCAGGACATTCCTGGGCC...GGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | CTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTAGGGGGCATCGGCTCATaGCCCACCTGGATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQLRRGSFGTEHENPRLVGGIGS*PTWMSS Trigger: GCTGCTCATCCAGGTGGGTCATGAGCCGATGCCCCC...TACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | GAACACGAGAACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCTCCCCATCACGAACTTaGTATAGCTCCGGATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EHENPRLVLLPVPHVAQPSPSRT*YSSGWP Trigger: TGGCCATCCGGAGCTATACCAAGTTCGTGATGGGGA...GGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | TCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGCCCTAACAACCCAGGAACGAGAACCCAAGGTTaGTACTGCTGCCAGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SCRREESVSNASRPNNPGTRTQG*YCCQFP Trigger: GGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGT...TCCTGGGTTGTTAGGGCGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGCCCATGTTACTTGAAGGAGAAGCAGTTCTTGGGCTTTACCACCTGCCAAGACCCCAGGCCCCCTaGCCCGCCATCCATCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: FQPMLLEGEAVLGLYHLPRPQAP*PAIHPA Trigger: CGCAGGATGGATGGCGGGTCAGGGGGCCTGGGGTCT...TGGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | AACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGTCAGCCCATGTTACTTaGAGGAGAAGCAGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: NPRLVLLPVPHVAQPHPQSAHVT*RRSSSW Trigger: CCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGA...CTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | TCCTGCAGGAGGGAGGAGTCGGTTTCCAATGCCAGCCGCCCTAACAACCCAGGACAGTGCTTGCTCACCTaGACACTCAGGTACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SCRREESVSNASRPNNPGQCLLT*TLRYFQ Trigger: CTGGAAGTACCTGAGTGTGCAGGTGAGCAAGCACTG...TCCTGGGTTGTTAGGGCGGCTGGCATTGGAAACCGACTCCTCCCTCCTGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACCGCCGTCCAGTGCTTaGTCACCTGCACACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LQLRRGSFGTEHENPRLVPPSSA*SPAHSG Trigger: ACCTGAGTGTGCAGGTGAGCAAGCACTGGACGGCGG...TACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | ACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCCACCCACAGGGGAACTCAGCTCAACTaGTTACAGACCTCGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: TQGWYCCQFPTWPSPTHRGTQLN*LQTSNF Trigger: AAAATTCGAGGTCTGTAACCAGTTGAGCTGAGTTCC...CCTGTGGGTGGGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | CAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACTGACCCACAGGCTCTCCTaGGCCCAGGAATGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QLRRGSFGTEHENPRLVLTHRLS*AQECPA Trigger: TGCAGGACATTCCTGGGCCCAGGAGAGCCTGTGGGT...CAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | CAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACTGCATGACCCACCTGGATaGGCAGCTTCACGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLRRGSFGTEHENPRLVLHDPPG*AASRRA Trigger: TGCTCTACGTGAAGCTGCTCATCCAGGTGGGTCATG...CAGTACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACTGTACTTGGCGTAGGTaGAGAAGCTCGGCAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: WAQELQLRRGSFGTEHENCTWRR*RSSADR Trigger: TCTATCTGCCGAGCTTCTTCACCTACGCCAAGTACA...GTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACGGTCAGCATGCTCACTaGAATCCCCATCACGAACTT | + |
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Preference number: 4 (lower is better) Translates to: WAQELQLRRGSFGTEHENGQHAH*NPHHEL Trigger: AAGTTCGTGATGGGGATTGCAGTGAGCATGCTGACC...GTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | AGCCGCCCTAACAACCCAGGAACTCAGCTCAACTGGTTACAGACCTCGAATTTTACCCAAGGTTGGTACTaGTGCCAGTTCCCCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRPNNPGTQLNWLQTSNFTQGWY*CQFPTW Trigger: CCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGT...AAAATTCGAGGTCTGTAACCAGTTGAGCTGAGTTCCTGGGTTGTTAGGGCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTAAGGAGAAGCAGTTCTTaGGCTTTACCACCTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: LQLRRGSFGTEHENPRLVRRSSS*ALPPAT Trigger: GGTGGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCT...TACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CCA 90 bp | TTTCAGCCCATGTTACTTGAAGGAGAAGCAGTTCTTGGGCTTTACCACCTGCCATTACCACCTGCCACCTaGGCCAGAGTTCTCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: FQPMLLEGEAVLGLYHLPLPPAT*ARVLLS Trigger: GGATAAGAGAACTCTGGCCCAGGTGGCAGGTGGTAA...TGGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR TCA 90 bp | CAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTATCTTTGCATGCAATaGAGCATCCACAAAACCATT | + |
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Preference number: 4 (lower is better) Translates to: QELQLRRGSFGTEHENPRYLCMQ*SIHKTI Trigger: AATGGTTTTGTGGATGCTTCATTGCATGCAAAGATA...CCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGGTACCACTTATCTTTGCATaGAATGAAGCATCCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: LQLRRGSFGTEHENPRLVPLIFA*NEASTK Trigger: TTTTGTGGATGCTTCATTGCATGCAAAGATAAGTGG...TACCAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| 3UTR CAA 72 bp | ACTGGTTACAGACCTCGAATTTTCAGCCCATGTTACTaGAAGGAGAAGCAGTTCTTGGGCTTTACCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TGYRPRIFSPCY*KEKQFLGFTTC Trigger: GCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAAAATTCGAGGTCTGTAACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS CCA 90 bp | AGCCGCAGGCCGAGGGTGGCGAGGATGTGCGCGGTGCGCGGGCGGTaGATCGCGAGCTCGAGCCTCGACCCCCGCCGCCGCTCCGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SRRPRVARMCAVRGR*IASSSLDPRRRSAA Trigger: CGCGGCGGAGCGGCGGCGGGGGTCGAGGCTCGAGCTCGCGATCCACCGCCCGCGCACCGCGCACATCCTCGCCACCCTCGGCCTGCGGCT 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373616.9 ENST00000373627.10 ENST00000460219.2 |
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| CDS TCA 90 bp | GACCCCAGGCCCCCTGACCCGCCATCCATCCTGCGGGCCGAGGGCTaGGCCGCAGGCCGAGGGTGGCGAGGATGTGCGCGGTGCGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: DPRPPDPPSILRAEG*AAGRGWRGCARCAG Trigger: GCCCGCGCACCGCGCACATCCTCGCCACCCTCGGCCTGCGGCTCAGCCCTCGGCCCGCAGGATGGATGGCGGGTCAGGGGGCCTGGGGTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000373616.9 ENST00000373627.10 ENST00000460219.2 |
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| CDS CCA 90 bp | CGCCAACACCCTGTACCAAGACCTGCCTCCAGCCATTACCAGGGTTaGCCTCCTAGGCCCCGCTTGGGTCCGCAAGGCAGTGGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RQHPVPRPASSHYQG*PPRPRLGPQGSGKE Trigger: TTCCTTCCCACTGCCTTGCGGACCCAAGCGGGGCCTAGGAGGCCAACCCTGGTAATGGCTGGAGGCAGGTCTTGGTACAGGGTGTTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS CCA 90 bp | GACCTGCCTCCAGCCATTACCAGGGTTGGCCTCCTAGGCCCCGCTTaGGTCCGCAAGGCAGTGGGAAGGAAGGACAGCTGGCACAACTTA | + |
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Preference number: 5 (lower is better) Translates to: DLPPAITRVGLLGPA*VRKAVGRKDSWHNL Trigger: TAAGTTGTGCCAGCTGTCCTTCCTTCCCACTGCCTTGCGGACCCAAGCGGGGCCTAGGAGGCCAACCCTGGTAATGGCTGGAGGCAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS-3UTR CAA 90 bp | GAACACGAGAACCCAAGGTTGGTACTGCTGCCAGTTCCCCACGTGGCCCAGCCCACAGTAGAGAGGGCGTaGGACATCAGCCGGGGACTC | + |
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Preference number: 5 (lower is better) Translates to: EHENPRLVLLPVPHVAQPTVERA*DISRGL Trigger: GAGTCCCCGGCTGATGTCCAACGCCCTCTCTACTGT...GGGCTGGGCCACGTGGGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CAA 90 bp | TGGACCCCTGACTGCTGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTCACGAGAACCCAAGGTaGGTACTGCTGCCAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: WTPDCWAQELQLRRGSFGHENPR*VLLPVP Trigger: GGGAACTGGCAGCAGTACCAACCTTGGGTTCTCGTG...ACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCAGCAGTCAGGGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS CCA 90 bp | CTAGGCCCCGCTTGGGTCCGCAAGGCAGTGGGAAGGAAGGACAGCTaGCACAACTTACCCCCATCACGAACTTGGTATAGCTCCGGATGG | + |
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Preference number: 5 (lower is better) Translates to: LGPAWVRKAVGRKDS*HNLPPSRTWYSSGW Trigger: CCATCCGGAGCTATACCAAGTTCGTGATGGGGGTAAGTTGTGCCAGCTGTCCTTCCTTCCCACTGCCTTGCGGACCCAAGCGGGGCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS GCA 90 bp | GGCCAGGGCCTGGCTGAACTGAGGAGACAGAAGGGAAGAGTGGTTTaGCACAGGCACCTCAGGATGCAGACTTCAGCAACACATGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GQGLAELRRQKGRVV*HRHLRMQTSATHAL Trigger: GAGGGCATGTGTTGCTGAAGTCTGCATCCTGAGGTGCCTGTGGCAAACCACTCTTCCCTTCTGTCTCCTCAGTTCAGCCAGGCCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471737.1 |
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| CDS-3UTR CAA 90 bp | GAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGTCCGCCGTCCAGTGCTaGCTCACCTGCACACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ELQLRRGSFGTEHENPRLSAVQC*LTCTLR Trigger: CCTGAGTGTGCAGGTGAGCAAGCACTGGACGGCGGA...CAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CAA 90 bp | GAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACCCAAGGTTGAAGGAGAAGCAGTTCTaGGGCTTTACCACCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ELQLRRGSFGTEHENPRLKEKQF*GFTTCH Trigger: GTGGCAGGTGGTAAAGCCCAAGAACTGCTTCTCCTT...CAACCTTGGGTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCAAGAGCTCCAGCTACGGAGAGGTAGCTTCGGTACAGAACACGAGAACTTCAGCCCATGTTACTaGAAGGAGAAGCAGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: WAQELQLRRGSFGTEHENFSPCY*KEKQFL Trigger: CAAGAACTGCTTCTCCTTCAAGTAACATGGGCTGAA...GTTCTCGTGTTCTGTACCGAAGCTACCTCTCCGTAGCTGGAGCTCTTGGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS GCA 90 bp | TATCTCCTCACAATATTGAATTCCATGAAACCACTTATCTTTGCATaGAATGAAGCATCCACAAAACCATTTCAGCTGAAGGATGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: YLLTILNSMKPLIFA*NEASTKPFQLKDVA Trigger: TGCTACATCCTTCAGCTGAAATGGTTTTGTGGATGCTTCATTGCATGCAAAGATAAGTGGTTTCATGGAATTCAATATTGTGAGGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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| CDS CCA 72 bp | CCGAGGGTGGCGAGGATGTGCGCGGTGCGCGGGCGGTaGATCGCGAGCTCGAGCCTCGACCCCCGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRVARMCAVRGR*IASSSLDPRRR Trigger: GCGGCGGCGGGGGTCGAGGCTCGAGCTCGCGATCCACCGCCCGCGCACCGCGCACATCCTCGCCACCCTCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373616.9 ENST00000373627.10 ENST00000460219.2 |
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| CDS TCA 72 bp | CCCCCTGACCCGCCATCCATCCTGCGGGCCGAGGGCTaGGCCGCAGGCCGAGGGTGGCGAGGATGTGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: PPDPPSILRAEG*AAGRGWRGCAR Trigger: CCGCGCACATCCTCGCCACCCTCGGCCTGCGGCTCAGCCCTCGGCCCGCAGGATGGATGGCGGGTCAGGGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000373616.9 ENST00000373627.10 ENST00000460219.2 |
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| CDS CCA 72 bp | CCAGCCATTACCAGGGTTGGCCTCCTAGGCCCCGCTTaGGTCCGCAAGGCAGTGGGAAGGAAGGACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PAITRVGLLGPA*VRKAVGRKDSW Trigger: CCAGCTGTCCTTCCTTCCCACTGCCTTGCGGACCCAAGCGGGGCCTAGGAGGCCAACCCTGGTAATGGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS CCA 72 bp | CCTGTACCAAGACCTGCCTCCAGCCATTACCAGGGTTaGCCTCCTAGGCCCCGCTTGGGTCCGCAAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PVPRPASSHYQG*PPRPRLGPQGS Trigger: ACTGCCTTGCGGACCCAAGCGGGGCCTAGGAGGCCAACCCTGGTAATGGCTGGAGGCAGGTCTTGGTACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS CAA 90 bp | AGACCTGCCTCCAGCCATTACCAGGGTTGGCCTCCTAGGCCCCGCTaGGGTCCGCAAGGCAGTGGGAAGGAAGGACAGCTGGCACAACTT | + |
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Preference number: 6 (lower is better) Translates to: RPASSHYQGWPPRPR*GPQGSGKEGQLAQL Trigger: AAGTTGTGCCAGCTGTCCTTCCTTCCCACTGCCTTGCGGACCCAAGCGGGGCCTAGGAGGCCAACCCTGGTAATGGCTGGAGGCAGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS CCA 72 bp | CAAAATGAGGCACCATGGCAGCTGAGCTTCCTGGGATaGTGGCCCCGCAGGACAGCTGTACTTGGCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QNEAPWQLSFLG*WPRRTAVLGLP Trigger: CGGGAGGCCAAGTACAGCTGTCCTGCGGGGCCACCATCCCAGGAAGCTCAGCTGCCATGGTGCCTCATTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418541.6 |
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| CDS GCA 72 bp | AGAAGGGAAGAGTGGTTTGCCACAGGCACCTCAGGATaGAGACTTCAGCAACACATGCCCTCACCCCACCCT | + |
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Preference number: 6 (lower is better) Translates to: RREEWFATGTSG*RLQQHMPSPHP Trigger: AGGGTGGGGTGAGGGCATGTGTTGCTGAAGTCTGCATCCTGAGGTGCCTGTGGCAAACCACTCTTCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471737.1 |
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| CDS CCA 72 bp | GCTTGGGTCCGCAAGGCAGTGGGAAGGAAGGACAGCTaGCACAACTTACCCCCATCACGAACTTGGTATAGC | + |
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Preference number: 6 (lower is better) Translates to: AWVRKAVGRKDS*HNLPPSRTWYS Trigger: GCTATACCAAGTTCGTGATGGGGGTAAGTTGTGCCAGCTGTCCTTCCTTCCCACTGCCTTGCGGACCCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492754.1 |
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| CDS GCA 72 bp | CTGGCTGAACTGAGGAGACAGAAGGGAAGAGTGGTTTaGCACAGGCACCTCAGGATGCAGACTTCAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: LAELRRQKGRVV*HRHLRMQTSAT Trigger: TGTTGCTGAAGTCTGCATCCTGAGGTGCCTGTGGCAAACCACTCTTCCCTTCTGTCTCCTCAGTTCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471737.1 |
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| CDS GCA 72 bp | ACAATATTGAATTCCATGAAACCACTTATCTTTGCATaGAATGAAGCATCCACAAAACCATTTCAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TILNSMKPLIFA*NEASTKPFQLK Trigger: CTTCAGCTGAAATGGTTTTGTGGATGCTTCATTGCATGCAAAGATAAGTGGTTTCATGGAATTCAATATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460219.2 |
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