RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTBP (Homo sapiens)

Ensembl gene IDs: ENSG00000172167

Ensembl transcript IDs: ENST00000305949.6, ENST00000456899.6, ENST00000519188.1, ENST00000519556.1, ENST00000519841.1, ENST00000522308.1, ENST00000522449.1, ENST00000523373.5

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGATGCTTTGAGAAAAGAAGGGCTGCAATGCCACCAGAGAACGTaGTGTCAGACACCATCTGTAGTGAGCAGCGCACCAGATGTAGCG +
Preference number: 1 (lower is better)
Translates to: QDALRKEGLQCHQRT*CQTPSVVSSAPDVA
Trigger: CGCTACATCTGGTGCGCTGCTCACTACAGATGGTGTCTGACATCACGTTCTCTGGTGGCATTGCAGCCCTTCTTTTCTCAAAGCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519556.1
3UTR CCA 90 bp ACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAATGGTACATaGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAAT +
Preference number: 1 (lower is better)
Translates to: TELVGRWNQYVTNGT*QYKKSTNLATQRRN
Trigger: ATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
3UTR-3UTR GCA 90 bp CTATTACCACTGAACCACAGGAGGGTGCCTTTCCCAAGACCATCATACAGTCTCATGATGGAATCAGGATaGTTTGAGAAAAGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: LLPLNHRRVPFPRPSYSLMMESG*FEKRRA
Trigger: AGCCCTTCTTTTCTCAAAGCATCCTGATTCCATCAT...GAGACTGTATGATGGTCTTGGGAAAGGCACCCTCCTGTGGTTCAGTGGTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519556.1
3UTR-3UTR GCA 90 bp TCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAAAAGAGCACCAACCTTaGTACACAGAGAAGAAATCT +
Preference number: 2 (lower is better)
Translates to: SFHFLELSWLGGGISMLLKEHQP*YTEKKS
Trigger: AGATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTT...TAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523373.5
3UTR TCA 72 bp TTGAGAAAAGAAGGGCTGCAATGCCACCAGAGAACGTaGTGTCAGACACCATCTGTAGTGAGCAGCGCACCA +
Preference number: 3 (lower is better)
Translates to: LRKEGLQCHQRT*CQTPSVVSSAP
Trigger: TGGTGCGCTGCTCACTACAGATGGTGTCTGACATCACGTTCTCTGGTGGCATTGCAGCCCTTCTTTTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519556.1
3UTR GCA 72 bp AAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCTaGTCCAACAGCAACACAGAATTCTGTTTGGTACTG +
Preference number: 3 (lower is better)
Translates to: KRAPTLLHREEI*SNSNTEFCLVL
Trigger: CAGTACCAAACAGAATTCTGTGTTGCTGTTGGAGCAGATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CCA 90 bp AAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCTGCTCCAACAGCAACACGTTCTGCCTCCCTACTaGCCGCCGACGGGAATTTTC +
Preference number: 4 (lower is better)
Translates to: KKSTNLATQRRNLLQQQHVLPPY*PPTGIF
Trigger: GAAAATTCCCGTCGGCGGCCAGTAGGGAGGCAGAAC...GTGTTGCTGTTGGAGCAGATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp CAGCGCACCAGATGTAGCGTGCTACAGTCAGCTTTAGCTCTCAAGAGTCGTATGATTTTCTATTACCACTaGACCACAGGAGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: QRTRCSVLQSALALKSRMIFYYH*TTGGCL
Trigger: AAGGCACCCTCCTGTGGTTCAGTGGTAATAGAAAAT...CATACGACTCTTGAGAGCTAAAGCTGACTGTAGCACGCTACATCTGGTGCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR GCA 90 bp TATGTTACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGCTCTGGCCCATGTTCTaGCTCCCTACTGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: YVTNGTWQYKKSTNLATQLWPMF*LPTGRR
Trigger: TCGGCGGCCAGTAGGGAGGCAGAACATGGGCCAGAG...CTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CCA 90 bp TGTCAGACACCATCTGTAGTGAGCAGCGCACCAGATGTAGCGTGCTACAGTCAGATTTCAAAGAGACGCTaGCTGCATGCAGTGAAACAT +
Preference number: 4 (lower is better)
Translates to: CQTPSVVSSAPDVACYSQISKRR*LHAVKH
Trigger: ATGTTTCACTGCATGCAGCCAGCGTCTCTTTGAAAT...CTGACTGTAGCACGCTACATCTGGTGCGCTGCTCACTACAGATGGTGTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR TCA 90 bp ATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCGCTGTGAAGTCCGGCTaGTTCTCAGTACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: MVHGNTKRAPTLLHREEIAVKSG*FSVPSP
Trigger: GGGTGAGGGTACTGAGAATCAGCCGGACTTCACAGC...GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp TCTATTACCACTGAACCACAGGAGGGTGCCTTTCCCAAGACCATCATACAGTCTGGAATCAGGATGCTTTaGGAAAAGAAGGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SITTEPQEGAFPKTIIQSGIRML*EKKGCN
Trigger: ATTGCAGCCCTTCTTTTCTCAAAGCATCCTGATTCC...AGACTGTATGATGGTCTTGGGAAAGGCACCCTCCTGTGGTTCAGTGGTAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR TCA 90 bp CCTTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAATGTCTTCAGGCTGGCTGCATGCAGTaGAACATTCATGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PFPRPSYSLLMKSSKCLQAGCMQ*NIHESR
Trigger: CCGAGACTCATGAATGTTTCACTGCATGCAGCCAGC...CTGAAGACATTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR TCA 90 bp CTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAAGGTATACCTCCCACTaGACAGGCAGGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LMVHGNTKRAPTLLHREERYTSH*TGREST
Trigger: AGTACTTTCCCTGCCTGTTCAGTGGGAGGTATACCT...TTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp AGGAGGGTGCCTTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAAGCAGTGAAACATTCATaGGTCTCGGTAATACTGTGT +
Preference number: 4 (lower is better)
Translates to: RRVPFPRPSYSLLMKSSKAVKHS*VSVILC
Trigger: ACACAGTATTACCGAGACTCATGAATGTTTCACTGC...TTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAAGGCACCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR TCA 90 bp GCTATATATTCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTAGCTTGTCTGACAGCTaGTGCAAATTTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AIYSFHFLELSWLGGGISSLSDS*CKFSAA
Trigger: AGCTGCAGAAAATTTGCATCAGCTGTCAGACAAGCT...ACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGAATATATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp GCTATATATTCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTTTCCTTCCATTTTCTTaGACTGAGTTGGTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AIYSFHFLELSWLGGGISFLPFS*TELVGR
Trigger: CCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGAA...ACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGAATATATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp TTAGCTATATATTCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCGAGGTGATAAACATTTaGTGCTGTGAAGTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAIYSFHFLELSWLGGGIEVINI*CCEVRL
Trigger: CAGCCGGACTTCACAGCAGCAAATGTTTATCACCTC...GATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGAATATATAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CCA 90 bp ATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCCAAAGAACCACTTCTTaGAACCAGGTATACCTCCCA +
Preference number: 4 (lower is better)
Translates to: MVHGNTKRAPTLLHREEIQRTTS*NQVYLP
Trigger: TGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTG...GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp TTAGCTATATATTCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCTCCATTTTCTTGAACTaGGTTGGTTGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LAIYSFHFLELSWLGGGISIFLN*VGWEVE
Trigger: TTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGA...GATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGAATATATAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp TCCTTCCATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTACACAGAGAAGAAATCTaGTCCAACAGCAACACAGAA +
Preference number: 4 (lower is better)
Translates to: SFHFLELSWLGGGISMLLHREEI*SNSNTE
Trigger: TTCTGTGTTGCTGTTGGAGCAGATTTCTTCTCTGTG...TAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp TTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAATGTCTTCAGATGAGACGCTGGCTGCATaGAGTGAAACATTCATGAGT +
Preference number: 4 (lower is better)
Translates to: FPKTIIQSPYEKLKMSSDETLAA*SETFMS
Trigger: ACTCATGAATGTTTCACTGCATGCAGCCAGCGTCTC...ATCTGAAGACATTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR GCA 90 bp CATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAATGGTAGTGATAAACATTTGCTaGTGTGAAGTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: HFLELSWLGGGISMLLMVVINIC*CEVRLI
Trigger: AATCAGCCGGACTTCACAGCAGCAAATGTTTATCAC...TACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp ACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAAAGAGCACCAACCTTaGTACACAGAGAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: TNGTWQYKKSTNLATQRRKEHQP*YTEKKS
Trigger: AGATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTT...TCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp CCTTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAATGTCTTCAGATGATGGAATCAGGATaGTTTGAGAAAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PFPRPSYSLLMKSSKCLQMMESG*FEKRRA
Trigger: AGCCCTTCTTTTCTCAAAGCATCCTGATTCCATCAT...CTGAAGACATTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS-3UTR CCA 90 bp ATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCGAGTTGGTTGGGAGGTaGAATCAGTATGTTACTAAT +
Preference number: 4 (lower is better)
Translates to: MVHGNTKRAPTLLHREEIELVGR*NQYVTN
Trigger: ATTAGTAACATACTGATTCCACCTCCCAACCAACTC...GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp ACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGATATCCTTTGATGGTATaGTCTTTTTGGCAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TNGTWQYKKSTNLATQRRYPLMV*SFWQGS
Trigger: ACTTCCTTGCCAAAAAGATCATACCATCAAAGGATA...TCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp CAGTATGTTACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACATATTATATCTACCATTaGTCTACCAGGAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QYVTNGTWQYKKSTNLATYYIYH*STRSRK
Trigger: CTTCCTGCTCCTGGTAGAGCAATGGTAGATATAATA...TGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR GCA 90 bp ATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCAGGATAATGATTCCCTaGTATTACTGTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MVHGNTKRAPTLLHREEIRIMIP*YYCLLL
Trigger: AAGAAGAAGACAGTAATAGCAGGGAATCATTATCCT...GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CCA 90 bp AGTATGTTACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACACACAGAATTCTGTTTaGTACTGTTTGTCAATCCTC +
Preference number: 4 (lower is better)
Translates to: SMLLMVHGNTKRAPTLLHTQNSV*YCLSIL
Trigger: GAGGATTGACAAACAGTACCAAACAGAATTCTGTGT...GTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACATACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR TCA 90 bp TTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAATGTCTTCAGATCATACAGTCTCCTTATaGAAAGCTCAAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: FPKTIIQSPYEKLKMSSDHTVSL*KAQNVF
Trigger: GAAGACATTTTGAGCTTTTCATAAGGAGACTGTATG...ATCTGAAGACATTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS CCA 90 bp TGTGAAGTCCGGCTGATTCTCAGTACCCTCACCCGACGACACCTCTaGCCCATGTTCTGCCTCCCTACTGGCCGCCGACGGGAATTTTCC +
Preference number: 5 (lower is better)
Translates to: CEVRLILSTLTRRHL*PMFCLPTGRRREFS
Trigger: GGAAAATTCCCGTCGGCGGCCAGTAGGGAGGCAGAACATGGGCCAGAGGTGTCGTCGGGTGAGGGTACTGAGAATCAGCCGGACTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305949.6
ENST00000456899.6
ENST00000522308.1
ENST00000523373.5
CDS TCA 90 bp TTTTTGCCTTTGAGAAAAGAAGGGCTGCAATGCCACCAGAGAACGTaGTGTCAGACACCATCTGTAGTGAGCAGCGCACCAGATGTAGCG +
Preference number: 5 (lower is better)
Translates to: FLPLRKEGLQCHQRT*CQTPSVVSSAPDVA
Trigger: CGCTACATCTGGTGCGCTGCTCACTACAGATGGTGTCTGACATCACGTTCTCTGGTGGCATTGCAGCCCTTCTTTTCTCAAAGGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519841.1
CDS TCA 90 bp AAAGGCTCTAAGACTAAACGGAGAGAGAAAGCCAGCCAGCTCCACTaGACCCAGCCTCCAAATCATCTGCAAGTTCAAAACACCCACATC +
Preference number: 5 (lower is better)
Translates to: KGSKTKRREKASQLH*TQPPNHLQVQNTHI
Trigger: GATGTGGGTGTTTTGAACTTGCAGATGATTTGGAGGCTGGGTTCAGTGGAGCTGGCTGGCTTTCTCTCTCCGTTTAGTCTTAGAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CCA 90 bp AAAATTCCAGCTAACTTGCAGGAGAGATCATCTGAGAAGACCATGTaGCAAGGAAAAGGCTCTAAGACTAAACGGAGAGAGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KIPANLQERSSEKTM*QGKGSKTKRREKAS
Trigger: GCTGGCTTTCTCTCTCCGTTTAGTCTTAGAGCCTTTTCCTTGCCACATGGTCTTCTCAGATGATCTCTCCTGCAAGTTAGCTGGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CCA 90 bp CCTGATAAAATCCATATATTGCCTGCACTGCAAAGAACCACTTCTTaGAACCAGGTATACCTCCCACTGAACAGGCAGGGAAAGTACTAT +
Preference number: 5 (lower is better)
Translates to: PDKIHILPALQRTTS*NQVYLPLNRQGKYY
Trigger: ATAGTACTTTCCCTGCCTGTTCAGTGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGTGCAGGCAATATATGGATTTTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456899.6
CDS CCA 90 bp ACTGATAAAATCCATATATTGCCTGCACTGCAAAGAACCACTTCTTaGAACCAGGTATACCTCCCACTGAACAGGCAGGGAAAGTACTAT +
Preference number: 5 (lower is better)
Translates to: TDKIHILPALQRTTS*NQVYLPLNRQGKYY
Trigger: ATAGTACTTTCCCTGCCTGTTCAGTGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGTGCAGGCAATATATGGATTTTATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305949.6
ENST00000522308.1
ENST00000523373.5
CDS-3UTR CAA 90 bp CATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAATGGTAGCAAAGAACCACTTCTaGGAACCAGGTATACCTCCC +
Preference number: 5 (lower is better)
Translates to: HFLELSWLGGGISMLLMVAKNHF*EPGIPP
Trigger: GGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGC...TACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CAA 90 bp ATGTTACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGACTTGAACTGAGTTGGTaGGGAGGTGGAATCAGTATG +
Preference number: 5 (lower is better)
Translates to: MLLMVHGNTKRAPTLLHRLELSW*GGGISM
Trigger: CATACTGATTCCACCTCCCAACCAACTCAGTTCAAG...TCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGTAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CAA 90 bp GAGGGTGCCTTTCCCAAGACCATCATACAGTCTCCTTATGAAAAGCTCAAAATGCCCTGTACAGCATTGTaGTTTGCTGTTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: EGAFPKTIIQSPYEKLKMPCTAL*FAVFFI
Trigger: AATGAAGAAAACAGCAAACAACAATGCTGTACAGGG...CATTTTGAGCTTTTCATAAGGAGACTGTATGATGGTCTTGGGAAAGGCACCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519556.1
CDS GCA 90 bp TTTCTGCAGCTTCTTCATAGAGATCAGCCAAGGATAATGATTCCCTaGTATTACTGTCTTCTTCTTCAAAACACTCAACAGCACCCAAAC +
Preference number: 5 (lower is better)
Translates to: FLQLLHRDQPRIMIP*YYCLLLQNTQQHPN
Trigger: GTTTGGGTGCTGTTGAGTGTTTTGAAGAAGAAGACAGTAATAGCAGGGAATCATTATCCTTGGCTGATCTCTATGAAGAAGCTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305949.6
ENST00000523373.5
CDS GCA 90 bp CATGGTTCATACTTGTCTCTTTTTCTCTCTCTTTCTCTCTCAGCTTaGACGTCTCGTCTCAATGCAAGTAGTCCATGTGTTGAAATTCAT +
Preference number: 5 (lower is better)
Translates to: HGSYLSLFLSLSLSA*TSRLNASSPCVEIH
Trigger: ATGAATTTCAACACATGGACTACTTGCATTGAGACGAGACGTGCAAGCTGAGAGAGAAAGAGAGAGAAAAAGAGACAAGTATGAACCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519841.1
CDS CCA 90 bp AGGTCATACACTCTGGAAGTACCTTCCATTTTGCCTTCACAGTGTTaGCCAAACAGACTTATAATTATTGTCCTAGGTACATTCCTCACT +
Preference number: 5 (lower is better)
Translates to: RSYTLEVPSILPSQC*PNRLIIIVLGTFLT
Trigger: AGTGAGGAATGTACCTAGGACAATAATTATAAGTCTGTTTGGCCAACACTGTGAAGGCAAAATGGAAGGTACTTCCAGAGTGTATGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS-3UTR CAA 90 bp ATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAATCGTATTATATCTACCATaGCTCTACCAGGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: MVHGNTKRAPTLLHREEIVLYLP*LYQEQE
Trigger: TTCCTGCTCCTGGTAGAGCAATGGTAGATATAATAC...GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CAA 90 bp ACTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAAAAGAGCACCAACCTaGCTACACAGAGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: TNGTWQYKKSTNLATQRRKRAPT*LHREEI
Trigger: GATTTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTT...TCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS TCA 90 bp AACACACATCAAGGCCAAAGTATGATGGAACACACTTCACCAATGTaGCTTTGGGAAAGCAATTTTAACATTCTAAGCCAGAATCACCTC +
Preference number: 5 (lower is better)
Translates to: NTHQGQSMMEHTSPM*LWESNFNILSQNHL
Trigger: GAGGTGATTCTGGCTTAGAATGTTAAAATTGCTTTCCCAAAGTCACATTGGTGAAGTGTGTTCCATCATACTTTGGCCTTGATGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS GCA 90 bp AGTACTAACAGACTTTTGAGTTCAGCAACAGAAACTGTTTCAGGCTaGTTTGCCAACTTTCGTCTTTTTAGGCATTCTTCCAAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: STNRLLSSATETVSG*FANFRLFRHSSKAK
Trigger: TTTAGCTTTGGAAGAATGCCTAAAAAGACGAAAGTTGGCAAAGCAGCCTGAAACAGTTTCTGTTGCTGAACTCAAAAGTCTGTTAGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305949.6
CDS-3UTR CAA 90 bp CATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAATGGTAGATAAAATCCATATATaGCCTGCACTGCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: HFLELSWLGGGISMLLMVDKIHI*PALQRT
Trigger: GGTTCTTTGCAGTGCAGGCAATATATGGATTTTATC...TACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS-3UTR CAA 90 bp CTAATGGTACATGGCAATACAAAAAGAGCACCAACCTTGCTACACAGAGAAGAAGATGGTATGATCTTTTaGGCAAGGAAGTCAGTATTT +
Preference number: 5 (lower is better)
Translates to: LMVHGNTKRAPTLLHREEDGMIF*ARKSVF
Trigger: AAATACTGACTTCCTTGCCAAAAAGATCATACCATC...TTCTTCTCTGTGTAGCAAGGTTGGTGCTCTTTTTGTATTGCCATGTACCATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS GCA 90 bp ATACAAAAACCATATAAGCATACTCAGCCAAGGATAATGATTCCCTaGTATTACTGTCTTCTTCTTCAAAACACTCAACAGCACCCAAAC +
Preference number: 5 (lower is better)
Translates to: IQKPYKHTQPRIMIP*YYCLLLQNTQQHPN
Trigger: GTTTGGGTGCTGTTGAGTGTTTTGAAGAAGAAGACAGTAATAGCAGGGAATCATTATCCTTGGCTGAGTATGCTTATATGGTTTTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522308.1
CDS-3UTR CAA 90 bp CATTTTCTTGAACTGAGTTGGTTGGGAGGTGGAATCAGTATGTTACTAATGGTAAACACAGAATTCTGTTaGGTACTGTTTGTCAATCCT +
Preference number: 5 (lower is better)
Translates to: HFLELSWLGGGISMLLMVNTEFC*VLFVNP
Trigger: AGGATTGACAAACAGTACCAAACAGAATTCTGTGTT...TACCATTAGTAACATACTGATTCCACCTCCCAACCAACTCAGTTCAAGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523373.5
CDS CCA 72 bp CGGCTGATTCTCAGTACCCTCACCCGACGACACCTCTaGCCCATGTTCTGCCTCCCTACTGGCCGCCGACGG +
Preference number: 6 (lower is better)
Translates to: RLILSTLTRRHL*PMFCLPTGRRR
Trigger: CCGTCGGCGGCCAGTAGGGAGGCAGAACATGGGCCAGAGGTGTCGTCGGGTGAGGGTACTGAGAATCAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305949.6
ENST00000456899.6
ENST00000522308.1
ENST00000523373.5
CDS GCA 72 bp AGTACCCTCACCCGACGACACCTCTGGCCCATGTTCTaGCTCCCTACTGGCCGCCGACGGGAATTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: STLTRRHLWPMF*LPTGRRREFSF
Trigger: GAAGGAAAATTCCCGTCGGCGGCCAGTAGGGAGGCAGAACATGGGCCAGAGGTGTCGTCGGGTGAGGGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305949.6
ENST00000456899.6
ENST00000522308.1
ENST00000523373.5
CDS GCA 72 bp CCAGCCAGCTCCACTGAACCCAGCCTCCAAATCATCTaGAAGTTCAAAACACCCACATCAATGACTTCTCGT +
Preference number: 6 (lower is better)
Translates to: PASSTEPSLQII*KFKTPTSMTSR
Trigger: ACGAGAAGTCATTGATGTGGGTGTTTTGAACTTGCAGATGATTTGGAGGCTGGGTTCAGTGGAGCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS TCA 72 bp GTACTTCAGCAATTCTTTAGCATCCAACAATGTGATTaGGTCCCGAGGACCCTCTTTGTGGCCCAGCAACTG +
Preference number: 6 (lower is better)
Translates to: VLQQFFSIQQCD*VPRTLFVAQQL
Trigger: CAGTTGCTGGGCCACAAAGAGGGTCCTCGGGACTCAATCACATTGTTGGATGCTAAAGAATTGCTGAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305949.6
CDS CCA 72 bp ATCCATATATTGCCTGCACTGCAAAGAACCACTTCTTaGAACCAGGTATACCTCCCACTGAACAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: IHILPALQRTTS*NQVYLPLNRQG
Trigger: TCCCTGCCTGTTCAGTGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGTGCAGGCAATATATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305949.6
ENST00000456899.6
ENST00000522308.1
ENST00000523373.5
CDS CAA 72 bp AATCCATATATTGCCTGCACTGCAAAGAACCACTTCTaGGAACCAGGTATACCTCCCACTGAACAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: NPYIACTAKNHF*EPGIPPTEQAG
Trigger: CCCTGCCTGTTCAGTGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGTGCAGGCAATATATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305949.6
ENST00000456899.6
ENST00000522308.1
ENST00000523373.5
CDS CCA 72 bp CACCTTACATGCAGGTACAATTTGCCTCTACATCCATaGGTTTCACACTGTGGATTCAACCAACCACGAATT +
Preference number: 6 (lower is better)
Translates to: HLTCRYNLPLHP*VSHCGFNQPRI
Trigger: AATTCGTGGTTGGTTGAATCCACAGTGTGAAACCCATGGATGTAGAGGCAAATTGTACCTGCATGTAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 90 bp CTGCTGAGGGCAGCTCAGACTGCAAACTATAAGCAAATAAAATGTTaGCTCTTTCAAGCCACTAAGTTTCGGGGTGGCTTATTACGCAAT +
Preference number: 6 (lower is better)
Translates to: LLRAAQTANYKQIKC*LFQATKFRGGLLRN
Trigger: ATTGCGTAATAAGCCACCCCGAAACTTAGTGGCTTGAAAGAGCAAACATTTTATTTGCTTATAGTTTGCAGTCTGAGCTGCCCTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS GCA 72 bp TACTTGTCTCTTTTTCTCTCTCTTTCTCTCTCAGCTTaGACGTCTCGTCTCAATGCAAGTAGTCCATGTGTT +
Preference number: 6 (lower is better)
Translates to: YLSLFLSLSLSA*TSRLNASSPCV
Trigger: AACACATGGACTACTTGCATTGAGACGAGACGTGCAAGCTGAGAGAGAAAGAGAGAGAAAAAGAGACAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519841.1
CDS CAA 72 bp ACTTTTCTCCACTTTCACCTTACATGCAGGTACAATTaGCCTCTACATCCATGGGTTTCACACTGTGGATTC +
Preference number: 6 (lower is better)
Translates to: TFLHFHLTCRYN*PLHPWVSHCGF
Trigger: GAATCCACAGTGTGAAACCCATGGATGTAGAGGCAAATTGTACCTGCATGTAAGGTGAAAGTGGAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 90 bp CATTTCCTAACTTTTCTCCACTTTCACCTTACATGCAGGTACAATTaGCCTCTACATCCATGGGTTTCACACTGTGGATTCAACCAACCA +
Preference number: 6 (lower is better)
Translates to: HFLTFLHFHLTCRYN*PLHPWVSHCGFNQP
Trigger: TGGTTGGTTGAATCCACAGTGTGAAACCCATGGATGTAGAGGCAAATTGTACCTGCATGTAAGGTGAAAGTGGAGAAAAGTTAGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 90 bp GCTCAACACAGTAGGTACTGGAAAACTTTCTCTGGTGCAGGTAGTTaGAGTTTCATAACGAATAAGACGAGACTGAAGTTCAGAAAATCC +
Preference number: 6 (lower is better)
Translates to: AQHSRYWKTFSGAGS*SFITNKTRLKFRKS
Trigger: GGATTTTCTGAACTTCAGTCTCGTCTTATTCGTTATGAAACTCAAACTACCTGCACCAGAGAAAGTTTTCCAGTACCTACTGTGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305949.6
CDS TCA 72 bp TTGAGTGCAAATGAGCCATTGATCTGGTTGGCTGAGTaGATCAATGTGGCTTTACATCTTCTATTGCCATTA +
Preference number: 6 (lower is better)
Translates to: LSANEPLIWLAE*INVALHLLLPL
Trigger: TAATGGCAATAGAAGATGTAAAGCCACATTGATTCACTCAGCCAACCAGATCAATGGCTCATTTGCACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305949.6
ENST00000519188.1
CDS TCA 72 bp CAAGGCCAAAGTATGATGGAACACACTTCACCAATGTaGCTTTGGGAAAGCAATTTTAACATTCTAAGCCAG +
Preference number: 6 (lower is better)
Translates to: QGQSMMEHTSPM*LWESNFNILSQ
Trigger: CTGGCTTAGAATGTTAAAATTGCTTTCCCAAAGTCACATTGGTGAAGTGTGTTCCATCATACTTTGGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS TCA 72 bp AAAGTCTTGGTAGTTTCAAGTTCTATATGTTTGTCCTaGGCCACCATGGAAAAATTCCAGCTAACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: KVLVVSSSICLS*ATMEKFQLTCR
Trigger: CCTGCAAGTTAGCTGGAATTTTTCCATGGTGGCTCAGGACAAACATATAGAACTTGAAACTACCAAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 72 bp AGTAGGTACTGGAAAACTTTCTCTGGTGCAGGTAGTTaGAGTTTCATAACGAATAAGACGAGACTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: SRYWKTFSGAGS*SFITNKTRLKF
Trigger: GAACTTCAGTCTCGTCTTATTCGTTATGAAACTCAAACTACCTGCACCAGAGAAAGTTTTCCAGTACCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305949.6
CDS TCA 72 bp ACAGTAATAATGTCTCCTCCTATAGGAAACTTTTCTTaGGCTCTTAAGGCTATGTTAGGTCATACACTCTGG +
Preference number: 6 (lower is better)
Translates to: TVIMSPPIGNFS*ALKAMLGHTLW
Trigger: CCAGAGTGTATGACCTAACATAGCCTTAAGAGCTCAAGAAAAGTTTCCTATAGGAGGAGACATTATTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 72 bp GCTCCAACAGCAACACAGAATTCTGTTTGGTACTGTTaGTCAATCCTCTGTAAACTCAAATTCAATATCCGA +
Preference number: 6 (lower is better)
Translates to: APTATQNSVWYC*SILCKLKFNIR
Trigger: TCGGATATTGAATTTGAGTTTACAGAGGATTGACAAACAGTACCAAACAGAATTCTGTGTTGCTGTTGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522449.1
ENST00000523373.5
CDS CAA 72 bp TATGTTAGGTCATACACTCTGGAAGTACCTTCCATTTaGCCTTCACAGTGTTGGCCAAACAGACTTATAATT +
Preference number: 6 (lower is better)
Translates to: YVRSYTLEVPSI*PSQCWPNRLII
Trigger: AATTATAAGTCTGTTTGGCCAACACTGTGAAGGCAAAATGGAAGGTACTTCCAGAGTGTATGACCTAACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522449.1
CDS CAA 72 bp TCTAAAAAGTGTTTCCTTGTGAGTACTAACAGACTTTaGAGTTCAGCAACAGAAACTGTTTCAGGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SKKCFLVSTNRL*SSATETVSGCF
Trigger: AAAGCAGCCTGAAACAGTTTCTGTTGCTGAACTCAAAAGTCTGTTAGTACTCACAAGGAAACACTTTTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305949.6
CDS CAA 72 bp ACTTTTTACATTGGTGGCTTCCTATTATTCACACCTTaGGATAGGTACTTCCCCCTTGAATTTAGACTATTC +
Preference number: 6 (lower is better)
Translates to: TFYIGGFLLFTP*DRYFPLEFRLF
Trigger: GAATAGTCTAAATTCAAGGGGGAAGTACCTATCCAAAGGTGTGAATAATAGGAAGCCACCAATGTAAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522449.1