RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTARC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186205

Ensembl transcript IDs: ENST00000366910.10, ENST00000407981.6, ENST00000443880.1, ENST00000463976.1, ENST00000472269.1, ENST00000492847.1, ENST00000496110.1

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTGCCCAGTGAGGAGGGTTTCTGGGTGCTCCCTTCCACGTGGGTaGTGCCCTGCAGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGA +
Preference number: 1 (lower is better)
Translates to: VCPVRRVSGCSLPRG*CPAELATPRACPWR
Trigger: TCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACTGGGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp ACAGGTCTGCCCAGTGAGGAGGGTTTCTGGGTGCTCCCTTCCACGTaGGTGCTGCCCTGCAGAGCTAGCTACCCCGAGAGCCTGTCCATG +
Preference number: 1 (lower is better)
Translates to: TGLPSEEGFWVLPST*VLPCRASYPESLSM
Trigger: CATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACTGGGCAGACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp CGTGGGTGCTGCCCTGCAGAGCTAGCTACCCCGAGAGCCTGTCCATaGAGAATGATGGTTACTGCCCGGACGGGGCACAGAGAAGTGGCT +
Preference number: 1 (lower is better)
Translates to: RGCCPAELATPRACP*RMMVTARTGHREVA
Trigger: AGCCACTTCTCTGTGCCCCGTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp AGTGAGGAGGGTTTCTGGGTGCTCCCTTCCACGTGGGTGCTGCCCTaGAGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGT +
Preference number: 1 (lower is better)
Translates to: SEEGFWVLPSTWVLP*RASYPESLSMENDG
Trigger: ACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp CTGTCCTCGGCCGTCCTGGGCCTCGGACTAACAAGCGGCTTTAATTaGTGGGCAGGTCATGTGGAAGGTGCTCCTCCCTTCAACCCAGTA +
Preference number: 1 (lower is better)
Translates to: LSSAVLGLGLTSGFN*WAGHVEGAPPFNPV
Trigger: TACTGGGTTGAAGGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAGGCCCAGGACGGCCGAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp CCTCCGGAGCCTGGCCCACATTGTCCTTTTCAAGACCTCCAGCTCTaGGTTTGTGACTCCCCACTGTGGCTGCAGCATAAGTTGCCACAC +
Preference number: 1 (lower is better)
Translates to: PPEPGPHCPFQDLQL*VCDSPLWLQHKLPH
Trigger: GTGTGGCAACTTATGCTGCAGCCACAGTGGGGAGTCACAAACTCAGAGCTGGAGGTCTTGAAAAGGACAATGTGGGCCAGGCTCCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp TGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTaGAACGAAGAGCTCTCCAGCTGTCCTCGGCCGTCCTGGGCCTCG +
Preference number: 1 (lower is better)
Translates to: CVYKELSRLMLTRAA*NEELSSCPRPSWAS
Trigger: CGAGGCCCAGGACGGCCGAGGACAGCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TCCTCGGCCGTCCTGGGCCTCGGACTAACAAGCGGCTTTAATTGCTaGGCAGGTCATGTGGAAGGTGCTCCTCCCTTCAACCCAGTAAAT +
Preference number: 1 (lower is better)
Translates to: SSAVLGLGLTSGFNC*AGHVEGAPPFNPVN
Trigger: ATTTACTGGGTTGAAGGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAGGCCCAGGACGGCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp CTTTTCAAGACCTCCAGCTCTGAGTTTGTGACTCCCCACTGTGGCTaGAGCATAAGTTGCCACACAGAGGAGATGCCCACCGAGGGTGGA +
Preference number: 1 (lower is better)
Translates to: LFKTSSSEFVTPHCG*SISCHTEEMPTEGG
Trigger: TCCACCCTCGGTGGGCATCTCCTCTGTGTGGCAACTTATGCTGCAGCCACAGTGGGGAGTCACAAACTCAGAGCTGGAGGTCTTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp GAAGAGCAGAGTTATAGTCAGAGCTGTGGCCCAAGCCTCTTCCTGTaGAGAGAGTGTGGTCAGAGCAGACCAAGGGATGCCTCAGGGACT +
Preference number: 1 (lower is better)
Translates to: EEQSYSQSCGPSLFL*RECGQSRPRDASGT
Trigger: AGTCCCTGAGGCATCCCTTGGTCTGCTCTGACCACACTCTCTTCACAGGAAGAGGCTTGGGCCACAGCTCTGACTATAACTCTGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp TTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTaGCTGCAACGAAGAGCTCTCCAGCTGTCCTCGGCCGTCCTGGGC +
Preference number: 1 (lower is better)
Translates to: FMCLQRAFPVDVNQS*LQRRALQLSSAVLG
Trigger: GCCCAGGACGGCCGAGGACAGCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp ATGGCAAGGATCCAGGGGTCCTCCATGACTACACAACCATCCTCCTaGGCACCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGC +
Preference number: 1 (lower is better)
Translates to: MARIQGSSMTTQPSS*APLGNPMLSEKQQG
Trigger: GCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGGTGCTCAGGAGGATGGTTGTGTAGTCATGGAGGACCCCTGGATCCTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR TCA 90 bp TTCCTCCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATaGGTCATACGGGCTCAGATCCGCGGTAGCTATGTGAGCGCTGGA +
Preference number: 1 (lower is better)
Translates to: FLQCYGIQTTGMARK*VIRAQIRGSYVSAG
Trigger: TCCAGCGCTCACATAGCTACCGCGGATCTGAGCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp AATGTAATTAAGGCAACTCTTCTCTCTGAGCCAGGCCACAGAGCATaGGAGCAGGTGCCCCACCACCCAATTCCTCAGCTGTGTTTGGAG +
Preference number: 1 (lower is better)
Translates to: NVIKATLLSEPGHRA*EQVPHHPIPQLCLE
Trigger: CTCCAAACACAGCTGAGGAATTGGGTGGTGGGGCACCTGCTCCCATGCTCTGTGGCCTGGCTCAGAGAGAAGAGTTGCCTTAATTACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp AGGGAGAAGGAGAGGAGGAGTATTTCTCCCTATAGGACAACGGCCTaGATTCCAACAGCCTCCCCTTCCCCAATTTCTTTCTGCCTTCGT +
Preference number: 1 (lower is better)
Translates to: REKERRSISPYRTTA*IPTASPSPISFCLR
Trigger: ACGAAGGCAGAAAGAAATTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATACTCCTCCTCTCCTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp ATTGCTCCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATaGTTTCCTAAATCCTGTGTACACTCACTCTCCCACGGGTCCCCC +
Preference number: 1 (lower is better)
Translates to: IAPYLLAIPREPIFT*FPKSCVHSLSHGSP
Trigger: GGGGGACCCGTGGGAGAGTGAGTGTACACAGGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp AACGATCATCATTCCTCCAATGTTATGGCATCCAGACGACAGGAATaGCTCGCAAATGAGTCATACGGGCTCAGATCCGCGGTAGCTATG +
Preference number: 1 (lower is better)
Translates to: NDHHSSNVMASRRQE*LANESYGLRSAVAM
Trigger: CATAGCTACCGCGGATCTGAGCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGGAGGAATGATGATCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp GGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATCTTaGTACTGCTCACTTTGGGTCCGTGCCACCTTTAAGAGCTGTAAC +
Preference number: 1 (lower is better)
Translates to: GPLPKLCSFALHNKS*YCSLWVRATFKSCN
Trigger: GTTACAGCTCTTAAAGGTGGCACGGACCCAAAGTGAGCAGTAGCAAGATTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TGGCTGCAGCATAAGTTGCCACACAGAGGAGATGCCCACCGAGGGTaGATATTTTGGCCTGATCTCAAACATCTGTCATTTGCTGTTGTA +
Preference number: 1 (lower is better)
Translates to: WLQHKLPHRGDAHRG*IFWPDLKHLSFAVV
Trigger: TACAACAGCAAATGACAGATGTTTGAGATCAGGCCAAAATATCCACCCTCGGTGGGCATCTCCTCTGTGTGGCAACTTATGCTGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp CCACAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATaGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGC +
Preference number: 1 (lower is better)
Translates to: PQKNLQETIIIPPML*HPDDRNGSQMSHTG
Trigger: GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp AAACACAGATGTCTTCATGAAGGCCTCTCCAGAGCCTTTTGCCTTTaGAGAGAAGTGAGGCACGCAGGACTTTCCAAACTTACTGGTCCA +
Preference number: 1 (lower is better)
Translates to: KHRCLHEGLSRAFCL*REVRHAGLSKLTGP
Trigger: TGGACCAGTAAGTTTGGAAAGTCCTGCGTGCCTCACTTCTCTTCAAAGGCAAAAGGCTCTGGAGAGGCCTTCATGAAGACATCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp AGGAAGAGCAGTCTAGGATGCTCTGTAAAGGTAAAGGAGCATGACTaGGGACCAGCAAGGGTGAATGCACTAGACTGGCCAACAAATAAC +
Preference number: 1 (lower is better)
Translates to: RKSSLGCSVKVKEHD*GPARVNALDWPTNN
Trigger: GTTATTTGTTGGCCAGTCTAGTGCATTCACCCTTGCTGGTCCTCAGTCATGCTCCTTTACCTTTACAGAGCATCCTAGACTGCTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp TGGCTCGCAAATGAGTCATACGGGCTCAGATCCGCGGTAGCTATGTaGGCGCTGGACGATCAATTATTCATGTGTTTACAAAGAGCTTTC +
Preference number: 1 (lower is better)
Translates to: WLANESYGLRSAVAM*ALDDQLFMCLQRAF
Trigger: GAAAGCTCTTTGTAAACACATGAATAATTGATCGTCCAGCGCTCACATAGCTACCGCGGATCTGAGCCCGTATGACTCATTTGCGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp CTTTGTTCTTTCGCTCTCCACAATAAATCTTGCTACTGCTCACTTTaGGTCCGTGCCACCTTTAAGAGCTGTAACACTCACTGCGAAGGT +
Preference number: 1 (lower is better)
Translates to: LCSFALHNKSCYCSL*VRATFKSCNTHCEG
Trigger: ACCTTCGCAGTGAGTGTTACAGCTCTTAAAGGTGGCACGGACCCAAAGTGAGCAGTAGCAAGATTTATTGTGGAGAGCGAAAGAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp ACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTaGAGACTGACCAATACCAGGTCAGGGATTGGTAGAGGGCATAAC +
Preference number: 1 (lower is better)
Translates to: TKVRLNLVPTGIHQD*RLTNTRSGIGRGHN
Trigger: GTTATGCCCTCTACCAATCCCTGACCTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TCACTTGCCACTAATTATAAATACCTAGGAAGAGCCACCAAACCTTaGGTTTCTGATTGCTCCCTACCTATTGGCTATTCCCAGAGAGCC +
Preference number: 1 (lower is better)
Translates to: SLATNYKYLGRATKP*VSDCSLPIGYSQRA
Trigger: GGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCTTCCTAGGTATTTATAATTAGTGGCAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp CATAAGTTGCCACACAGAGGAGATGCCCACCGAGGGTGGATATTTTaGCCTGATCTCAAACATCTGTCATTTGCTGTTGTAAGATCTGAA +
Preference number: 1 (lower is better)
Translates to: HKLPHRGDAHRGWIF*PDLKHLSFAVVRSE
Trigger: TTCAGATCTTACAACAGCAAATGACAGATGTTTGAGATCAGGCCAAAATATCCACCCTCGGTGGGCATCTCCTCTGTGTGGCAACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TATCTGTTCTCCACCATCATGGGTTGCTTTAATTTGATACACTCTTaGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATCACT +
Preference number: 1 (lower is better)
Translates to: YLFSTIMGCFNLIHS*NAGSTCLEFQPAIT
Trigger: AGTGATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAATTAAAGCAACCCATGATGGTGGAGAACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 90 bp TACACAACCATCCTCCTGAGCACCTTTAGGAAATCCAATGCTGTCTaGGAAGCAGCAGGGCCAGATCCAGATCTATGGAAAATTAATATC +
Preference number: 1 (lower is better)
Translates to: YTTILLSTFRKSNAV*EAAGPDPDLWKINI
Trigger: GATATTAATTTTCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGGTGCTCAGGAGGATGGTTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR GCA 90 bp AATTATAAATACCTAGGAAGAGCCACCAAACCTTGGGTTTCTGATTaGTCCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATG +
Preference number: 1 (lower is better)
Translates to: NYKYLGRATKPWVSD*SLPIGYSQRAHIHM
Trigger: CATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCTTCCTAGGTATTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TTGCCTTTGAAGAGAAGTGAGGCACGCAGGACTTTCCAAACTTACTaGTCCATGGAATTGTTTTTAGAAGCATCCCGAAAGGCAAACTTT +
Preference number: 1 (lower is better)
Translates to: LPLKRSEARRTFQTY*SMELFLEASRKANF
Trigger: AAAGTTTGCCTTTCGGGATGCTTCTAAAAACAATTCCATGGACCAGTAAGTTTGGAAAGTCCTGCGTGCCTCACTTCTCTTCAAAGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TGGAATAACAAAGGTCATCATAACAAACCATTACAGCCTTGGTCTTaGCAACTCTGGCCACAGAAGAACCTCCAAGAAACGATCATCATT +
Preference number: 1 (lower is better)
Translates to: WNNKGHHNKPLQPWS*QLWPQKNLQETIII
Trigger: AATGATGATCGTTTCTTGGAGGTTCTTCTGTGGCCAGAGTTGCCAAGACCAAGGCTGTAATGGTTTGTTATGATGACCTTTGTTATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 90 bp AACTGTAATAATTCACCAACCATAAAACAAGCACATGCACCTCTTTaGTCAGAACTTTACTTCAGGGCTCAGCTAGATTTCAGCGATTAC +
Preference number: 1 (lower is better)
Translates to: NCNNSPTIKQAHAPL*SELYFRAQLDFSDY
Trigger: GTAATCGCTGAAATCTAGCTGAGCCCTGAAGTAAAGTTCTGAGCAAAGAGGTGCATGTGCTTGTTTTATGGTTGGTGAATTATTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp CTCAAACATCTGTCATTTGCTGTTGTAAGATCTGAAAGTCTGGGATaGCCTACATTCCTGATTCTATATTTCAAGTGGAATAGTGTGCAA +
Preference number: 1 (lower is better)
Translates to: LKHLSFAVVRSESLG*PTFLILYFKWNSVQ
Trigger: TTGCACACTATTCCACTTGAAATATAGAATCAGGAATGTAGGCCATCCCAGACTTTCAGATCTTACAACAGCAAATGACAGATGTTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 90 bp TCTGAAAGTCTGGGATGGCCTACATTCCTGATTCTATATTTCAAGTaGAATAGTGTGCAAATGCTCAGTATCCAAAATAAATGGGATATC +
Preference number: 1 (lower is better)
Translates to: SESLGWPTFLILYFK*NSVQMLSIQNKWDI
Trigger: GATATCCCATTTATTTTGGATACTGAGCATTTGCACACTATTCCACTTGAAATATAGAATCAGGAATGTAGGCCATCCCAGACTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTGGCACCCCTCCCTGGTaGATGAAGCATCCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPGTPPW*MKHPGA
Trigger: TGCTCCAGGATGCTTCATGCACCAGGGAGGGGTGCC...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATACGTGGGTGCTGCCCTaGAGAGCTAGCTACCCCGAG +
Preference number: 2 (lower is better)
Translates to: FDTLLECWEHLPGISACHTWVLP*RASYPE
Trigger: CTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGT...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCCTTCCACGTGGGTGCTaGCCTGCAGAGCTAGCTACC +
Preference number: 2 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVALPRGC*PAELAT
Trigger: GGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAG...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAAAGCCCCTCCGGAGCCTaGCCCACATTGTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQSPSGA*PTLSFS
Trigger: TGAAAAGGACAATGTGGGCCAGGCTCCGGAGGGGCT...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAAGCCATAGCCAGGACTaGAGGCACACACCACCACAC +
Preference number: 2 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKSHSQD*RHTPPH
Trigger: GTGTGGTGGTGTGTGCCTGCAGTCCTGGCTATGGCT...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGCGGGGCACAGAGAAGTaGCTGTTAGTTCTTACAAGT +
Preference number: 2 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQRGTEK*LLVLTS
Trigger: ACTTGTAAGAACTAACAGCCACTTCTCTGTGCCCCG...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATCCAGGGGTCCTCCATaGCTACACAACCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKSRGPP*LHNHPP
Trigger: AGGAGGATGGTTGTGTAGTCATGGAGGACCCCTGGA...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCTATAGGACAACGGCCTaGATTCCAACAGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGYRTTA*IPTASP
Trigger: AGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATA...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGAGGAGGGTTTCTGGGTaGTCCCTTCCACGTGGGTGC +
Preference number: 2 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWRRVSG*SLPRGC
Trigger: GCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCT...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTGGCTCACTGGCATTCTaGCTAGAGATCAGAGGATCA +
Preference number: 2 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPGSLAF*LEIRGS
Trigger: TGATCCTCTGATCTCTAGGCAGAATGCCAGTGAGCC...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTTTTTTCACCCGGAACTaGAGAAGGAGCACTCCGTCA +
Preference number: 2 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPFFTRN*RRSTPS
Trigger: TGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAA...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCAGAGCCACCAAACCTTaGGTTTCTGATTGCTCCCTA +
Preference number: 2 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPRATKP*VSDCSL
Trigger: TAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCT...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp AAGGGAGAGGACAAGGGGAAGTGTCCCAAGATAGGTCTCCTTCACTaGGCGGGAACTTTTAACTTCTTCAGTCTTCCCATGAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: KGEDKGKCPKIGLLH*AGTFNFFSLPMSAP
Trigger: GGGTGCACTCATGGGAAGACTGAAGAAGTTAAAAGTTCCCGCCAAGTGAAGGAGACCTATCTTGGGACACTTCCCCTTGTCCTCTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCGTGGTAGTGACAGGATaGAAGTCTGCGCTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGVVVTG*KSALLV
Trigger: TACCAAGAGCGCAGACTTGCATCCTGTCACTACCAC...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCCTGGGAGCACTTGCCTaGAATTTCAGCCTGCCATCA +
Preference number: 2 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVALGALA*NFSLPS
Trigger: TGATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAG...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAACCCACAATCAAGGTCTaGTCTGAGAGCCACTCTGTC +
Preference number: 2 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKPTIKV*SESHSV
Trigger: GACAGAGTGGCTCTCAGACCAGACCTTGATTGTGGG...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCACTTGTTGGGGAAGGTaGTGGCCCAGGTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSTCWGR*WPRFSG
Trigger: TCCAGAGAACCTGGGCCATCACCTTCCCCAACAAGT...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCGCCTTTAAATCTCACTaGCAGAAAGCTTGGCAACTA +
Preference number: 2 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPAFKSH*QKAWQL
Trigger: TAGTTGCCAAGCTTTCTGTCAGTGAGATTTAAAGGC...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTTGCCATCACTGTTGGTaGCAGCCTCATAAATGGTTT +
Preference number: 2 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPCHHCW*QPHKWF
Trigger: AAACCATTTATGAGGCTGTCACCAACAGTGATGGCA...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGTGGTAGTGACAGGATaGAAGTCTGCGCTCTTGGTA +
Preference number: 2 (lower is better)
Translates to: EGHLSLYAISKASPGLEKVVVTG*KSALLV
Trigger: TACCAAGAGCGCAGACTTGCATCCTGTCACTACCAC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR GCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAAGGCATGAGCCCCTGTaGCCAGCCTCAGTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRRHEPL*PASVSF
Trigger: AAAGCTGACTGAGGCTGGGCACAGGGGCTCATGCCT...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAACAGAATTACTGGCTTTaGCCATTCACCTCAGTCAGC +
Preference number: 2 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQQNYWL*PFTSVS
Trigger: GCTGACTGAGGTGAATGGGCAAAGCCAGTAATTCTG...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCACTCCCCACTGTGGCTaGAGCATAAGTTGCCACACA +
Preference number: 2 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGTPHCG*SISCHT
Trigger: TGTGTGGCAACTTATGCTGCAGCCACAGTGGGGAGT...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCCTCATCTCCTCACCATaGCCCGTTATCAGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVALISSP*PVISKG
Trigger: CCCTTTACTGATAACGGGGCATGGTGAGGAGATGAG...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGGAGCATGGGAGCAGGTaGCCCACCACCCAATTCCTC +
Preference number: 2 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLEHGSR*PTTQFL
Trigger: GAGGAATTGGGTGGTGGGGCACCTGCTCCCATGCTC...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACAGTGAGGAGGGTTTCTaGGTGCTCCCTTCCACGTGG +
Preference number: 2 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDSEEGF*VLPSTW
Trigger: CCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACT...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCGTGCATGAAGCATCCTaGAGCACTTTCATCACAGGT +
Preference number: 2 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGVHEAS*STFITG
Trigger: ACCTGTGATGAAAGTGCTCCAGGATGCTTCATGCAC...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCAAATCCAATGCTGTCTaGGAAGCAGCAGGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGKSNAV*EAAGPD
Trigger: ATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTT...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGAATGCTGGGAGCACTTaGCTGGAATTTCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWNAGST*LEFQPA
Trigger: GGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATT...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGTCCACCATCATGGGTTaGTTTAATTTGATACACTCT +
Preference number: 2 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQSTIMG*FNLIHS
Trigger: AGAGTGTATCAAATTAAAGCAACCCATGATGGTGGA...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTTCTGAAAGTCTGGGATaGCCTACATTCCTGATTCTA +
Preference number: 2 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPSESLG*PTFLIL
Trigger: TAGAATCAGGAATGTAGGCCATCCCAGACTTTCAGA...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp CGCTGGACGATCAATTATTCATGTGTTTACAAAGAGCTTTCCCGGTaGATGTTAACCAGAGCTGCCTGCAACGAAGAGCTCTCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: RWTINYSCVYKELSR*MLTRAACNEELSSC
Trigger: ACAGCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAATTGATCGTCCAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCTGCTGTTGTAAGATCTaGAAGTCTGGGATGGCCTAC +
Preference number: 2 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFCCCKI*KSGMAY
Trigger: GTAGGCCATCCCAGACTTTCAGATCTTACAACAGCA...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCTGCATGTTTGGAAAATaGTCCCGAAGAAAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGCMFGK*SRRKRV
Trigger: CACTCTCTTTCTTCGGGATCATTTTCCAAACATGCA...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCGAAGGCAACACTAGTTaGGAGGACTTGCAACAGAAA +
Preference number: 2 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVAEGNTS*EDLQQK
Trigger: TTTCTGTTGCAAGTCCTCTCAACTAGTGTTGCCTTC...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGGCCACACAGAGGAGATaGCCACCGAGGGTGGATATT +
Preference number: 2 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLATQRR*PPRVDI
Trigger: AATATCCACCCTCGGTGGGCATCTCCTCTGTGTGGC...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACGGGATCCACCAGGATTaGAGACTGACCAATACCAGG +
Preference number: 2 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDGIHQD*RLTNTR
Trigger: CCTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCC...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAACACAGATGTCTTCATaGAGGCCTCTCCAGAGCCTT +
Preference number: 2 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRTQMSS*RPLQSL
Trigger: AAGGCTCTGGAGAGGCCTTCATGAAGACATCTGTGT...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGGATGCCCACCGAGGGTaGATATTTTGGCCTGATCTC +
Preference number: 2 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLDAHRG*IFWPDL
Trigger: GAGATCAGGCCAAAATATCCACCCTCGGTGGGCATC...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp GGTCCCCCGGTCCCATTAGTAATGCTACTTGCTGAACACTTCGCTTaGTCTCAATCTATCTGTAGTTTCAACATCAACTGGACTTGTTGG +
Preference number: 2 (lower is better)
Translates to: GPPVPLVMLLAEHFA*SQSICSFNINWTCW
Trigger: CCAACAAGTCCAGTTGATGTTGAAACTACAGATAGATTGAGACAAAGCGAAGTGTTCAGCAAGTAGCATTACTAATGGGACCGGGGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp ATCACTGTTGGTGACAGCCTCATAAATGGTTTCCCGAAGTCCCATTaGGCTAGTCTAATTTACCCAACCTCCCCATGCACTCTTACCAAA +
Preference number: 2 (lower is better)
Translates to: ITVGDSLINGFPKSH*ASLIYPTSPCTLTK
Trigger: TTTGGTAAGAGTGCATGGGGAGGTTGGGTAAATTAGACTAGCCAAATGGGACTTCGGGAAACCATTTATGAGGCTGTCACCAACAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACCAAACCTTGGGTTTCTaGTTGCTCCCTACCTATTGG +
Preference number: 2 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDQTLGF*LLPTYW
Trigger: CCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTG...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGAAGAAGAAAAGGGAAGTaGCATTCCAGCCATATTTGG +
Preference number: 2 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGRRKGK*HSSHIW
Trigger: CCAAATATGGCTGGAATGCCACTTCCCTTTTCTTCT...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR CCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAGAGCCCATATTCACATaGTTTCCTAAATCCTGTGTA +
Preference number: 2 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKEPIFT*FPKSCV
Trigger: TACACAGGATTTAGGAAACCATGTGAATATGGGCTC...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGCGAGGGTGGATATTTTaGCCTGATCTCAAACATCTG +
Preference number: 2 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWRGWIF*PDLKHL
Trigger: CAGATGTTTGAGATCAGGCCAAAATATCCACCCTCG...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGGTCTTGTCATTTAAGTaGCTTACTGAAGTCCTACTA +
Preference number: 2 (lower is better)
Translates to: KASPGLEKKREVAFQPYLVLSFK*LTEVLL
Trigger: TAGTAGGACTTCAGTAAGTCACTTAAATGACAAGAC...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR GCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGATTCGTGTGTATAAGTTaGTGCCCTCGTCTTTCGGTT +
Preference number: 2 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRFVCIS*CPRLSV
Trigger: AACCGAAAGACGAGGGCAGCAACTTATACACACGAA...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp AGAAGTGAGGCACGCAGGACTTTCCAAACTTACTGGTCCATGGAATaGTTTTTAGAAGCATCCCGAAAGGCAAACTTTCAGAATTCCATG +
Preference number: 2 (lower is better)
Translates to: RSEARRTFQTYWSME*FLEASRKANFQNSM
Trigger: CATGGAATTCTGAAAGTTTGCCTTTCGGGATGCTTCTAAAAACAATTCCATGGACCAGTAAGTTTGGAAAGTCCTGCGTGCCTCACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTTTGCACTGGGACATTaGAGCATTGAGACACCAGAA +
Preference number: 2 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYFALGH*SIETPE
Trigger: TTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAAA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR TCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCGTCTTGTCATTTAAGTaGCTTACTGAAGTCCTACTA +
Preference number: 2 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGVLSFK*LTEVLL
Trigger: TAGTAGGACTTCAGTAAGTCACTTAAATGACAAGAC...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATCAATTTAATTTTCATTaGGTACCTCATGAACAGGGG +
Preference number: 2 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYQFNFH*VPHEQG
Trigger: CCCCTGTTCATGAGGTACGCAATGAAAATTAAATTG...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR GCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACAAGAGCAGTCTAGGATaGTCTGTAAAGGTAAAGGAG +
Preference number: 2 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDKSSLG*SVKVKE
Trigger: CTCCTTTACCTTTACAGAGCATCCTAGACTGCTCTT...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGTTCCAAGAACATCTGTaGTACCGAGCCAGATTCTTC +
Preference number: 2 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLFQEHL*YRARFF
Trigger: GAAGAATCTGGCTCGGTACCACAGATGTTCTTGGAA...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp ATGGCCTTGGAAGAGGCTGAATGGGAAGTCACTTCTCAGTCCTTTTaGTTACTTTACACAACCTACAGCCTGTCCAGGAAGAATAATAAT +
Preference number: 2 (lower is better)
Translates to: MALEEAEWEVTSQSF*LLYTTYSLSRKNNN
Trigger: ATTATTATTCTTCCTGGACAGGCTGTAGGTTGTGTAAAGTAACAAAAAGGACTGAGAAGTGACTTCCCATTCAGCCTCTTCCAAGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGAAGTTCTGAAACACCATaGTTCAAGTGTTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGSSETP*FKCCHF
Trigger: AAAATGACAACACTTGAAGCATGGTGTTTCAGAACT...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGACTTTCAGAATTCCATaGACCAATAAAACACGGGAA +
Preference number: 2 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWTFRIP*TNKTRE
Trigger: TTCCCGTGTTTTATTGGTCCATGGAATTCTGAAAGT...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR TCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGTTCAGAGAAAGTGGTTaGAGCAAACAATCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLFRESG*SKQSLF
Trigger: GAACAGAGATTGTTTGCTTCAACCACTTTCTCTGAA...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR GCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTAGTTCTGAAACACCATaGTTCAAGTGTTGTCATTTT +
Preference number: 2 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSSSETP*FKCCHF
Trigger: AAAATGACAACACTTGAAGCATGGTGTTTCAGAACT...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR CAA 90 bp AAGAACATCTGTGGTACCGAGCCAGATTCTTCCTCTTGCTTGAAATaGGGTAACTTTAGATATCATCATAACTCATTCATCCATTCAGAG +
Preference number: 2 (lower is better)
Translates to: KNICGTEPDSSSCLK*GNFRYHHNSFIHSE
Trigger: CTCTGAATGGATGAATGAGTTATGATGATATCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATCTGGCTCGGTACCACAGATGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 90 bp AATTCCAAGAACATCTGTGGTACCGAGCCAGATTCTTCCTCTTGCTaGAAATTGGGTAACTTTAGATATCATCATAACTCATTCATCCAT +
Preference number: 2 (lower is better)
Translates to: NSKNICGTEPDSSSC*KLGNFRYHHNSFIH
Trigger: ATGGATGAATGAGTTATGATGATATCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATCTGGCTCGGTACCACAGATGTTCTTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CCCAGTGAGGAGGGTTTCTGGGTGCTCCCTTCCACGTaGGTGCTGCCCTGCAGAGCTAGCTACCCCGAGAGC +
Preference number: 3 (lower is better)
Translates to: PSEEGFWVLPST*VLPCRASYPES
Trigger: GCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp GGTTTCTGGGTGCTCCCTTCCACGTGGGTGCTGCCCTaGAGAGCTAGCTACCCCGAGAGCCTGTCCATGGAG +
Preference number: 3 (lower is better)
Translates to: GFWVLPSTWVLP*RASYPESLSME
Trigger: CTCCATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCACCCAGAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp TGCCCTGCAGAGCTAGCTACCCCGAGAGCCTGTCCATaGAGAATGATGGTTACTGCCCGGACGGGGCACAGA +
Preference number: 3 (lower is better)
Translates to: CPAELATPRACP*RMMVTARTGHR
Trigger: TCTGTGCCCCGTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCTGCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp GCCGTCCTGGGCCTCGGACTAACAAGCGGCTTTAATTaGTGGGCAGGTCATGTGGAAGGTGCTCCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: AVLGLGLTSGFN*WAGHVEGAPPF
Trigger: GAAGGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAGGCCCAGGACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp AAAGGTGGCCACCCCAGCCAGCAGCAGCAGCCCATTTaGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCC +
Preference number: 3 (lower is better)
Translates to: KGGHPSQQQQPI*VPFRSFVLSLS
Trigger: GGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGCTGCTGCTGGCTGGGGTGGCCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp AAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTaGAACGAAGAGCTCTCCAGCTGTCCTCGGCCGTCC +
Preference number: 3 (lower is better)
Translates to: KELSRLMLTRAA*NEELSSCPRPS
Trigger: GGACGGCCGAGGACAGCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp GTCCTGGGCCTCGGACTAACAAGCGGCTTTAATTGCTaGGCAGGTCATGTGGAAGGTGCTCCTCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: VLGLGLTSGFNC*AGHVEGAPPFN
Trigger: GTTGAAGGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAGGCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCCATCAACTGGACTTGTaGGGGAAGGTGATGGCCCAG +
Preference number: 3 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPHQLDL*GKVMAQ
Trigger: CTGGGCCATCACCTTCCCCAACAAGTCCAGTTGATG...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGATTGCTCCCTACCTATaGGCTATTCCCAGAGAGCCC +
Preference number: 3 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQIAPYL*AIPREP
Trigger: GGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAAT...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CCCATGAGTGCACCCCTCCTGCTAACTGGGATTCCTTaGCTCACTGGCATTCTGCCTAGAGATCAGAGGATC +
Preference number: 3 (lower is better)
Translates to: PMSAPLLLTGIP*LTGILPRDQRI
Trigger: GATCCTCTGATCTCTAGGCAGAATGCCAGTGAGCCAAGGAATCCCAGTTAGCAGGAGGGGTGCACTCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp AGTTATAGTCAGAGCTGTGGCCCAAGCCTCTTCCTGTaGAGAGAGTGTGGTCAGAGCAGACCAAGGGATGCC +
Preference number: 3 (lower is better)
Translates to: SYSQSCGPSLFL*RECGQSRPRDA
Trigger: GGCATCCCTTGGTCTGCTCTGACCACACTCTCTTCACAGGAAGAGGCTTGGGCCACAGCTCTGACTATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp TTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTaGCTGCAACGAAGAGCTCTCCAGCTGTCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: LQRAFPVDVNQS*LQRRALQLSSA
Trigger: GGCCGAGGACAGCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp TGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATaGGTCATACGGGCTCAGATCCGCGGTAGCTATGTG +
Preference number: 3 (lower is better)
Translates to: CYGIQTTGMARK*VIRAQIRGSYV
Trigger: CACATAGCTACCGCGGATCTGAGCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp TTCTACCTCATCCTCCCGAGTAGCCATAGCCAGGACTaGAGGCACACACCACCACACCGAGTGCATTTTAAA +
Preference number: 3 (lower is better)
Translates to: FYLILPSSHSQD*RHTPPHRVHFK
Trigger: TTTAAAATGCACTCGGTGTGGTGGTGTGTGCCTGCAGTCCTGGCTATGGCTACTCGGGAGGATGAGGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CATTCCTCCAATGTTATGGCATCCAGACGACAGGAATaGCTCGCAAATGAGTCATACGGGCTCAGATCCGCG +
Preference number: 3 (lower is better)
Translates to: HSSNVMASRRQE*LANESYGLRSA
Trigger: CGCGGATCTGAGCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGGAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCTTCGTGTGTATAAGTaGCTGCCCTCGTCTTTCGGT +
Preference number: 3 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPLRVYK*LPSSFG
Trigger: ACCGAAAGACGAGGGCAGCAACTTATACACACGAAG...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAATGCAAGTCTGCGCTCTaGGTAGATAAACGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQCKSAL*VDKRRS
Trigger: GCTTCTCCGTTTATCTACCAAGAGCGCAGACTTGCA...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGGCTGAACACTTCGCTTaGTCTCAATCTATCTGTAGT +
Preference number: 3 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQAEHFA*SQSICS
Trigger: ACTACAGATAGATTGAGACAAAGCGAAGTGTTCAGC...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCATAGGTCTCCTTCACTaGGCGGGAACTTTTAACTTC +
Preference number: 3 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPIGLLH*AGTFNF
Trigger: GAAGTTAAAAGTTCCCGCCAAGTGAAGGAGACCTAT...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp GTTGACTTGATAGTCCTTCAAACATGGGTGCTTGCCTaGGAGGCTGTGGGTGAGGAGGTCCATTATGCAGAA +
Preference number: 3 (lower is better)
Translates to: VDLIVLQTWVLA*EAVGEEVHYAE
Trigger: TTCTGCATAATGGACCTCCTCACCCACAGCCTCCCAGGCAAGCACCCATGTTTGAAGGACTATCAAGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp ATCCAGGGGTCCTCCATGACTACACAACCATCCTCCTaGGCACCTTTAGGAAATCCAATGCTGTCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: IQGSSMTTQPSS*APLGNPMLSEK
Trigger: CTTCTCAGACAGCATTGGATTTCCTAAAGGTGCTCAGGAGGATGGTTGTGTAGTCATGGAGGACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR TCA 72 bp GAGAGGAGGAGTATTTCTCCCTATAGGACAACGGCCTaGATTCCAACAGCCTCCCCTTCCCCAATTTCTTTC +
Preference number: 3 (lower is better)
Translates to: ERRSISPYRTTA*IPTASPSPISF
Trigger: GAAAGAAATTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATACTCCTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp TACCTAGGAAGAGCCACCAAACCTTGGGTTTCTGATTaGTCCCTACCTATTGGCTATTCCCAGAGAGCCCAT +
Preference number: 3 (lower is better)
Translates to: YLGRATKPWVSD*SLPIGYSQRAH
Trigger: ATGGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCTTCCTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp ACAGGTATTGCTGTAAGGGCAAGGTTAGAGAGAGTTTaGTTTCCCTTCCCTCACCCTGATCCACCCTATCCA +
Preference number: 3 (lower is better)
Translates to: TGIAVRARLERV*FPFPHPDPPYP
Trigger: TGGATAGGGTGGATCAGGGTGAGGGAAGGGAAACCAAACTCTCTCTAACCTTGCCCTTACAGCAATACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACTGGCTGCAGCATAAGTaGCCACACAGAGGAGATGCC +
Preference number: 3 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDWLQHK*PHRGDA
Trigger: GGCATCTCCTCTGTGTGGCAACTTATGCTGCAGCCA...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACGAATGCTGGGAGCACTaGCCTGGAATTTCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDECWEH*PGISAC
Trigger: GCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTC...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp ATCCTCCTGAGCACCTTTAGGAAATCCAATGCTGTCTaGGAAGCAGCAGGGCCAGATCCAGATCTATGGAAA +
Preference number: 3 (lower is better)
Translates to: ILLSTFRKSNAV*EAAGPDPDLWK
Trigger: TTTCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGGTGCTCAGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR TCA 72 bp CACTTGCCTGGAATTTCAGCCTGCCATCACTGTTGGTaGCAGCCTCATAAATGGTTTCCCGAAGTCCCATTT +
Preference number: 3 (lower is better)
Translates to: HLPGISACHHCW*QPHKWFPEVPF
Trigger: AAATGGGACTTCGGGAAACCATTTATGAGGCTGTCACCAACAGTGATGGCAGGCTGAAATTCCAGGCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp TGTCTTCATGAAGGCCTCTCCAGAGCCTTTTGCCTTTaGAGAGAAGTGAGGCACGCAGGACTTTCCAAACTT +
Preference number: 3 (lower is better)
Translates to: CLHEGLSRAFCL*REVRHAGLSKL
Trigger: AAGTTTGGAAAGTCCTGCGTGCCTCACTTCTCTTCAAAGGCAAAAGGCTCTGGAGAGGCCTTCATGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CCACACAGAGGAGATGCCCACCGAGGGTGGATATTTTaGCCTGATCTCAAACATCTGTCATTTGCTGTTGTA +
Preference number: 3 (lower is better)
Translates to: PHRGDAHRGWIF*PDLKHLSFAVV
Trigger: TACAACAGCAAATGACAGATGTTTGAGATCAGGCCAAAATATCCACCCTCGGTGGGCATCTCCTCTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp AGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTaGAGACTGACCAATACCAGGTCAGGGATTGGTAGA +
Preference number: 3 (lower is better)
Translates to: RLNLVPTGIHQD*RLTNTRSGIGR
Trigger: TCTACCAATCCCTGACCTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTGATTCTTCCTCTTGCTaGAAATTGGGTAACTTTAGA +
Preference number: 3 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPDSSSC*KLGNFR
Trigger: TCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATC...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGAGGGATCCACCAGGATaGGAGACTGACCAATACCAG +
Preference number: 3 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLRDPPG*ETDQYQ
Trigger: CTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCCT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp CCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATCTTaGTACTGCTCACTTTGGGTCCGTGCCACCTTTAAG +
Preference number: 3 (lower is better)
Translates to: PKLCSFALHNKS*YCSLWVRATFK
Trigger: CTTAAAGGTGGCACGGACCCAAAGTGAGCAGTAGCAAGATTTATTGTGGAGAGCGAAAGAACAAAGCTTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CATAAGTTGCCACACAGAGGAGATGCCCACCGAGGGTaGATATTTTGGCCTGATCTCAAACATCTGTCATTT +
Preference number: 3 (lower is better)
Translates to: HKLPHRGDAHRG*IFWPDLKHLSF
Trigger: AAATGACAGATGTTTGAGATCAGGCCAAAATATCCACCCTCGGTGGGCATCTCCTCTGTGTGGCAACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACTGCAAGTCTGCGCTCTaGGTAGATAAACGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYCKSAL*VDKRRS
Trigger: GCTTCTCCGTTTATCTACCAAGAGCGCAGACTTGCA...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR TCA 72 bp TGTATCTGTTCTCCACCATCATGGGTTGCTTTAATTTaGTACACTCTTGGAATGCTGGGAGCACTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: CICSPPSWVALI*YTLGMLGALAW
Trigger: CCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAATTAAAGCAACCCATGATGGTGGAGAACAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp AATGAGTCATACGGGCTCAGATCCGCGGTAGCTATGTaGGCGCTGGACGATCAATTATTCATGTGTTTACAA +
Preference number: 3 (lower is better)
Translates to: NESYGLRSAVAM*ALDDQLFMCLQ
Trigger: TTGTAAACACATGAATAATTGATCGTCCAGCGCTCACATAGCTACCGCGGATCTGAGCCCGTATGACTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp TACCTATTGGCTATTCCCAGAGAGCCCATATTCACATaGTTTCCTAAATCCTGTGTACACTCACTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: YLLAIPREPIFT*FPKSCVHSLSH
Trigger: GTGGGAGAGTGAGTGTACACAGGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp TCCACCATCATGGGTTGCTTTAATTTGATACACTCTTaGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: STIMGCFNLIHS*NAGSTCLEFQP
Trigger: AGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAATTAAAGCAACCCATGATGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp GGTAGCAACACTCCGATTATACCCACAATCAAGGTCTaGTCTGAGAGCCACTCTGTCATTTTCAAGGAACTT +
Preference number: 3 (lower is better)
Translates to: GSNTPIIPTIKV*SESHSVIFKEL
Trigger: AAGTTCCTTGAAAATGACAGAGTGGCTCTCAGACCAGACCTTGATTGTGGGTATAATCGGAGTGTTGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp AAAGGTCATCATAACAAACCATTACAGCCTTGGTCTTaGCAACTCTGGCCACAGAAGAACCTCCAAGAAACG +
Preference number: 3 (lower is better)
Translates to: KGHHNKPLQPWS*QLWPQKNLQET
Trigger: CGTTTCTTGGAGGTTCTTCTGTGGCCAGAGTTGCCAAGACCAAGGCTGTAATGGTTTGTTATGATGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCTGGGACATTGAAGCATaGAGACACCAGAAGTCCAAA +
Preference number: 3 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCWDIEA*RHQKSK
Trigger: TTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCA...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR CAA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACTGGGACATTGAAGCATaGAGACACCAGAAGTCCAAA +
Preference number: 3 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNWDIEA*RHQKSK
Trigger: TTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCA...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
3UTR-3UTR CAA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATTTCACAGTCTAACTTaGTGCCAAGAAGTTAGTAAG +
Preference number: 3 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKFHSLT*CQEVSK
Trigger: CTTACTAACTTCTTGGCACAAAGTTAGACTGTGAAA...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACTCACTGACAGAAAGCTaGGCAACTACTCTGAGATTC +
Preference number: 3 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDSLTES*ATTLRF
Trigger: GAATCTCAGAGTAGTTGCCAAGCTTTCTGTCAGTGA...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTaGAAGTTTCTAACATTTTCTGCAGGAGAGTCACAA +
Preference number: 3 (lower is better)
Translates to: LRVYKLLPSSFG*KFLTFSAGESQ
Trigger: TTGTGACTCTCCTGCAGAAAATGTTAGAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp AAGAGAAGTGAGGCACGCAGGACTTTCCAAACTTACTaGTCCATGGAATTGTTTTTAGAAGCATCCCGAAAG +
Preference number: 3 (lower is better)
Translates to: KRSEARRTFQTY*SMELFLEASRK
Trigger: CTTTCGGGATGCTTCTAAAAACAATTCCATGGACCAGTAAGTTTGGAAAGTCCTGCGTGCCTCACTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR TCA 72 bp CAACACTCCGATTATACCCACAATCAAGGTCTGGTCTaGGAGCCACTCTGTCATTTTCAAGGAACTTTAATG +
Preference number: 3 (lower is better)
Translates to: QHSDYTHNQGLV*EPLCHFQGTLM
Trigger: CATTAAAGTTCCTTGAAAATGACAGAGTGGCTCTCAGACCAGACCTTGATTGTGGGTATAATCGGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR GCA 72 bp CATCACAGGTGGTTTTGTAACTTACATCACAGGTATTaGTGTAAGGGCAAGGTTAGAGAGAGTTTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: HHRWFCNLHHRY*CKGKVRESLVS
Trigger: GGAAACCAAACTCTCTCTAACCTTGCCCTTACAGCAATACCTGTGATGTAAGTTACAAAACCACCTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp AATAACAAAGGTCATCATAACAAACCATTACAGCCTTaGTCTTGGCAACTCTGGCCACAGAAGAACCTCCAA +
Preference number: 3 (lower is better)
Translates to: NNKGHHNKPLQP*SWQLWPQKNLQ
Trigger: TTGGAGGTTCTTCTGTGGCCAGAGTTGCCAAGACCAAGGCTGTAATGGTTTGTTATGATGACCTTTGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp ACTAATTATAAATACCTAGGAAGAGCCACCAAACCTTaGGTTTCTGATTGCTCCCTACCTATTGGCTATTCC +
Preference number: 3 (lower is better)
Translates to: TNYKYLGRATKP*VSDCSLPIGYS
Trigger: GGAATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCTTCCTAGGTATTTATAATTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR-3UTR CAA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAATGGGTTGCTTTAATTaGATACACTCTTGGAATGCT +
Preference number: 3 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRMGCFN*IHSWNA
Trigger: AGCATTCCAAGAGTGTATCAAATTAAAGCAACCCAT...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CCA 72 bp CTGTCATTTGCTGTTGTAAGATCTGAAAGTCTGGGATaGCCTACATTCCTGATTCTATATTTCAAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: LSFAVVRSESLG*PTFLILYFKWN
Trigger: ATTCCACTTGAAATATAGAATCAGGAATGTAGGCCATCCCAGACTTTCAGATCTTACAACAGCAAATGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGCGTCTCGGTCGCATGTaGGGCTCGAAGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQRLGRM*GSKCTR
Trigger: CCTGGTGCACTTCGAGCCTCACATGCGACCGAGACG...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGGCCACTGTGCCCACCTaGTGCAGCAGCCGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLATVPT*CSSRRR
Trigger: GCGCCGGCGGCTGCTGCAGCAGGTGGGCACAGTGGC...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGACATGGGTGCTTGCCTaGGAGGCTGTGGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQTWVLA*EAVGEE
Trigger: CTCCTCACCCACAGCCTCCCAGGCAAGCACCCATGT...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGCCAGCTCTGAGTTTGTaGCTCCCCACTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQPALSL*LPTVAA
Trigger: TGCAGCCACAGTGGGGAGTCACAAACTCAGAGCTGG...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGGGCGGCGCCCATGGCTaGCTTCTCCGCGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWGGAHG*LLREVA
Trigger: CGCCACCTCGCGGAGAAGCCAGCCATGGGCGCCGCC...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCCCTGTCCATGGAGAATaGTGGTTACTGCCCGGACGG +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPPVHGE*WLLPGR
Trigger: CCGTCCGGGCAGTAACCATCATTCTCCATGGACAGG...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACGAGAATGATGGTTACTaGCCGGACGGGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: RASYPESLSMENDGYCPDENDGY*PDGAQR
Trigger: TCTCTGTGCCCCGTCCGGGCAGTAACCATCATTCTC...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCACGTGGGTGCTGCCCTaGAGAGCTAGCTACCCCGAG +
Preference number: 4 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGTWVLP*RASYPE
Trigger: CTCGGGGTAGCTAGCTCTGCAGGGCAGCACCCACGT...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGAGCCGGCGGCGCCCATaGCTGGCTTCTCCGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWSRRRP*LASPRG
Trigger: ACCTCGCGGAGAAGCCAGCCATGGGCGCCGCCGGCT...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAAAGGAGGGTTTCTGGGTaGTCCCTTCCACGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQRRVSG*SLPRGC
Trigger: GCACCCACGTGGAAGGGAGCACCCAGAAACCCTCCT...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCGAGCATGGGAGCAGGTaGCCCACCACCCAATTCCTC +
Preference number: 4 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGEHGSR*PTTQFL
Trigger: GAGGAATTGGGTGGTGGGGCACCTGCTCCCATGCTC...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp GAGCAGGTGCCCCACCACCCAATTCCTCAGCTGTGTTaGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EQVPHHPIPQLC*EEEQSYSQSCG
Trigger: GCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTGGGTGGTGGGGCACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATCTCTAGCCTGGAGTTaGGATCCGCCAGCGACGCCT +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKSLAWS*DPPATP
Trigger: AGGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGA...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGACCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGPRHSP*PLSPGR
Trigger: ACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGG...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCTTAACCAGAGCTGCCTaGAACGAAGAGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPLTRAA*NEELSS
Trigger: GCTGGAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAA...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACGATGTTAACCAGAGCTaGCTGCAACGAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RASYPESLSMENDGYCPDDVNQS*LQRRAL
Trigger: GAGAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATC...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTTTATCCACTGGGCGGTaGCCTCGCCACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVILSTGR*PRHSPC
Trigger: GCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAA...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGCCACAACAGGAGAGCTaGTCTAAGACACTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQPQQES*SKTLLH
Trigger: GTGGAGAAGTGTCTTAGACCAGCTCTCCTGTTGTGG...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGAGGCAGAGGCTGCAGTaGGCTGAGATCTCACCACTG +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKRQRLQ*AEISPL
Trigger: CAGTGGTGAGATCTCAGCTCACTGCAGCCTCTGCCT...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCCCAAGCCTCTTCCTGTaGAGAGAGTGTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGPSLFL*RECGQS
Trigger: GCTCTGACCACACTCTCTTCACAGGAAGAGGCTTGG...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTCCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSPRHSP*PLSPGR
Trigger: ACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGG...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGCAGAATTACTGGCTTTaGCCATTCACCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQQNYWL*PFTSVS
Trigger: GCTGACTGAGGTGAATGGGCAAAGCCAGTAATTCTG...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGCTGGGAGGCAGAGGCTaGAGTGAGCTGAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLLGGRG*SELRSH
Trigger: GTGAGATCTCAGCTCACTGCAGCCTCTGCCTCCCAG...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAAGCCCCTCCGGAGCCTaGCCCACATTGTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKSPSGA*PTLSFS
Trigger: TGAAAAGGACAATGTGGGCCAGGCTCCGGAGGGGCT...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTCAGGGCACCCCTCCCTaGTGCATGAAGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIQGTPP*CMKHPG
Trigger: TCCAGGATGCTTCATGCACCAGGGAGGGGTGCCCTG...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGACCAGGCCACAGAGCATaGGAGCAGGTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRPGHRA*EQVPHH
Trigger: GTGGTGGGGCACCTGCTCCCATGCTCTGTGGCCTGG...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCGTTCCTTCCTGCTCATaGCACCGGTGTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFVPSCS*HRCLGP
Trigger: TGGACCCAGACACCGGTGTCATGAGCAGGAAGGAAC...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTACACAGATGTCTTCATaGAGGCCTCTCCAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPTQMSS*RPLQSL
Trigger: AAGGCTCTGGAGAGGCCTTCATGAAGACATCTGTGT...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGGCAGAAGAATTGCTTaGACCTGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKGRRIA*TWEAEA
Trigger: AGCCTCTGCCTCCCAGGTTCAAGCAATTCTTCTGCC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAATCCGCGGTAGCTATGTaGGCGCTGGACGATCAATTA +
Preference number: 4 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQSAVAM*ALDDQL
Trigger: TAATTGATCGTCCAGCGCTCACATAGCTACCGCGGA...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCTCTATCTCCAGGCCGTaGACTCTGCACTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGSISRP*TLHLCT
Trigger: AGTGCACAAGTGCAGAGTGCACGGCCTGGAGATAGA...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGGCACATGCACCTCTTTaGTCAGAACTTTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQAHAPL*SELYFR
Trigger: CCTGAAGTAAAGTTCTGAGCAAAGAGGTGCATGTGC...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGCTTCCACGTGGGTGCTaGCCTGCAGAGCTAGCTACC +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWLPRGC*PAELAT
Trigger: GGTAGCTAGCTCTGCAGGGCAGCACCCACGTGGAAG...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCACAAGCGGCTTTAATTaGTGGGCAGGTCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPTSGFN*WAGHVE
Trigger: TTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGT...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCAAGCTGGTTATCCACTaGGCGGTGGCCTCGCCACAG +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSKLVIH*AVASPQ
Trigger: CTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTT...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCAGTGAGGAGGGTTTCTaGGTGCTCCCTTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGSEEGF*VLPSTW
Trigger: CCACGTGGAAGGGAGCACCCAGAAACCCTCCTCACT...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGACCCCTCCTGCTAACTaGGATTCCTTGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LPAHPLFLFLFFSFSNEWTPPAN*DSLAHW
Trigger: CCAGTGAGCCAAGGAATCCCAGTTAGCAGGAGGGGT...CCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCAGGTTAGAGAGAGTTTaGTTTCCCTTCCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPRLERV*FPFPHP
Trigger: AGGGTGAGGGAAGGGAAACCAAACTCTCTCTAACCT...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGCAGCAGCAGCCCATTTaGGTCCCCTTCCGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKQQQPI*VPFRSF
Trigger: AAAGCTTCGGAAGGGGACCCAAATGGGCTGCTGCTG...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACCAGCACTCTGTAAAATaGAGCAATCAGCAGGACATG +
Preference number: 4 (lower is better)
Translates to: RASYPESLSMENDGYCPDQHSVK*SNQQDM
Trigger: CATGTCCTGCTGATTGCTCCATTTTACAGAGTGCTG...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTCAGGGTCTCCCACTTTaGTGGTCCCTGGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIQGLPL*WSLGFP
Trigger: TGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTG...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAACCAGGATTGGAGACTaGCCAATACCAGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKTRIGD*PIPGQG
Trigger: TCCCTGACCTGGTATTGGTCAGTCTCCAATCCTGGT...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGTCCTTTGTGTAGGCTaGACTGAGAGTCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKVLCVG*TESQGV
Trigger: GACACCCTGACTCTCAGTGCAGCCTACACAAAGGAC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCCAGGCCGTGCACTCTaGACTTGTGCACTGCATTTG +
Preference number: 4 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGPGRAL*TCALHL
Trigger: CAAATGCAGTGCACAAGTGCAGAGTGCACGGCCTGG...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGTCTATCTCCAGGCCGTaGACTCTGCACTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLSISRP*TLHLCT
Trigger: AGTGCACAAGTGCAGAGTGCACGGCCTGGAGATAGA...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATTCCTTCAAACATGGGTaGTTGCCTGGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHSFKHG*LPGRLW
Trigger: CCACAGCCTCCCAGGCAAGCACCCATGTTTGAAGGA...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACGCCACACAGAGGAGATaGCCACCGAGGGTGGATATT +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDATQRR*PPRVDI
Trigger: AATATCCACCCTCGGTGGGCATCTCCTCTGTGTGGC...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCAGTCTTCCCATGAGTaGACCCCTCCTGCTAACTGG +
Preference number: 4 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGQSSHE*TPPANW
Trigger: CCAGTTAGCAGGAGGGGTGCACTCATGGGAAGACTG...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACGGCACCCCTCCCTGGTaGATGAAGCATCCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDGTPPW*MKHPGA
Trigger: TGCTCCAGGATGCTTCATGCACCAGGGAGGGGTGCC...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACTTATCCACTGGGCGGTaGCCTCGCCACAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYLSTGR*PRHSPC
Trigger: GCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAA...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTGTGACTTCAGGAAGCTaGTTATCCACTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIVTSGS*LSTGRW
Trigger: CCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCAC...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGTGACTTCAGGAAGCTaGTTATCCACTGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYVTSGS*LSTGRW
Trigger: CCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCAC...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGGTGCTCCCTTCCACGTaGGTGCTGCCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMVLPST*VLPCRA
Trigger: AGCTCTGCAGGGCAGCACCCACGTGGAAGGGAGCAC...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCGGTCTAGTGGGGACTTaGAGAACTTTTCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPGLVGT*RTFLSS
Trigger: GCTAGAAAGAAAAGTTCTCCAAGTCCCCACTAGACC...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCGCTGGGCAGGTCATGTaGAAGGTGCTCCTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSAGQVM*KVLLPS
Trigger: TGAAGGGAGGAGCACCTTCCACATGACCTGCCCAGC...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTCAGGCGGTAGGGCTGTaGCTTCAGGAAGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSQAVGL*LQEAGY
Trigger: ATAACCAGCTTCCTGAAGTCACAGCCCTACCGCCTG...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTCTCTAGCCTGGAGTTaGGATCCGCCAGCGACGCCT +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYSLAWS*DPPATP
Trigger: AGGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CCATGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCTCTCTAGCCTGGAGTTaGGATCCGCCAGCGACGCCT +
Preference number: 4 (lower is better)
Translates to: PCSNCAIFFPLGAKCHGSSLAWS*DPPATP
Trigger: AGGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGA...GCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR TCA 90 bp CTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGAAATCCAATGCTGTCTaGGAAGCAGCAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LPAHPLFLFLFFSFSNEWKSNAV*EAAGPD
Trigger: ATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTT...CCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGCCTTTGAAGAGAAGTaGGGCACGCAGGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYAFEEK*GTQDFP
Trigger: TGGAAAGTCCTGCGTGCCTCACTTCTCTTCAAAGGC...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAAGCCATAGCCAGGACTaGAGGCACACACCACCACAC +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLSHSQD*RHTPPH
Trigger: GTGTGGTGGTGTGTGCCTGCAGTCCTGGCTATGGCT...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATACAGAAGGACAGGTCTaGCCAGTGAGGAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYTEGQV*PVRRVS
Trigger: AGAAACCCTCCTCACTGGGCAGACCTGTCCTTCTGT...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGCTCATCTCCTCACCATaGCCCGTTATCAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLLISSP*PVISKG
Trigger: CCCTTTACTGATAACGGGGCATGGTGAGGAGATGAG...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATACCCAACCTCCCCATaGACTCTTACCAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKYPTSP*TLTKLA
Trigger: TGCCAGTTTGGTAAGAGTGCATGGGGAGGTTGGGTA...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGACCCGAAGAAAGAGAGTaGTTCTCCCTAAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGPEERE*FSLRPT
Trigger: TGTGGGCCTTAGGGAGAAGCACTCTCTTTCTTCGGG...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTACCATGTTTCCCTCCTaGTTGATCACAAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPTMFPS*LITSQN
Trigger: GTTTTGGCTTGTGATCAACCAGGAGGGAAACATGGT...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCACCAGGCGAGGTTCCTaGCGAGCAGTAACCATGTTT +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFTRRGS*RAVTMF
Trigger: AAACATGGTTACTGCTCGCCAGGAACCTCGCCTGGT...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACAAGCTGGTTATCCACTaGGCGGTGGCCTCGCCACAG +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYKLVIH*AVASPQ
Trigger: CTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGTTTTTCACCCGGAACTaGAGAAGGAGCACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKFFTRN*RRSTPS
Trigger: TGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAA...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp GGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTCCCTCTGAAAGTCTGGGATaGCCTACATTCCTGATTCTA +
Preference number: 4 (lower is better)
Translates to: GLTSGFNCWAGHVEGAPPSESLG*PTFLIL
Trigger: TAGAATCAGGAATGTAGGCCATCCCAGACTTTCAGA...GGGAGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACGATGCCCACCGAGGGTaGATATTTTGGCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDDAHRG*IFWPDL
Trigger: GAGATCAGGCCAAAATATCCACCCTCGGTGGGCATC...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATTGTGACTCCCCACTGTaGCTGCAGCATAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHCDSPL*LQHKLP
Trigger: TGGCAACTTATGCTGCAGCCACAGTGGGGAGTCACA...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATCTGGGAGCACTTGCCTaGAATTTCAGCCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHLGALA*NFSLPS
Trigger: TGATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAG...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCCCCACAATCAAGGTCTaGTCTGAGAGCCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFPTIKV*SESHSV
Trigger: GACAGAGTGGCTCTCAGACCAGACCTTGATTGTGGG...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGAGCGGCTTTAATTGCTaGGCAGGTCATGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLSGFNC*AGHVEG
Trigger: ACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCT...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGAGAATGGGCTGGTGTCTaGGTAAGCAATCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGEWAGV*VSNLVL
Trigger: AAGGACCAGATTGCTTACTCAGACACCAGCCCATTC...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACGAATGGGCTGGTGTCTaGGTAAGCAATCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDEWAGV*VSNLVL
Trigger: AAGGACCAGATTGCTTACTCAGACACCAGCCCATTC...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACGTTCCTTCCTGCTCATaGCACCGGTGTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYVPSCS*HRCLGP
Trigger: TGGACCCAGACACCGGTGTCATGAGCAGGAAGGAAC...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCCAGGGTCTCCCACTTTaGTGGTCCCTGGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCQGLPL*WSLGFP
Trigger: TGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTG...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGGTCTTGTCATTTAAGTaGCTTACTGAAGTCCTACTA +
Preference number: 4 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQVLSFK*LTEVLL
Trigger: TAGTAGGACTTCAGTAAGTCACTTAAATGACAAGAC...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCTCCAGGGGTCCTCCATaGCTACACAACCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCSRGPP*LHNHPP
Trigger: AGGAGGATGGTTGTGTAGTCATGGAGGACCCCTGGA...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACCCCCTCCCTGGTGCATaGAGCATCCTGGAGCACTTT +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYPLPGA*SILEHF
Trigger: AAAGTGCTCCAGGATGCTTCATGCACCAGGGAGGGG...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGGTCCTTTGTGTAGGCTaGACTGAGAGTCAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWVLCVG*TESQGV
Trigger: GACACCCTGACTCTCAGTGCAGCCTACACAAAGGAC...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGTGCACTCTGCACTTGTaGACTGCATTTGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWCTLHL*TAFVVG
Trigger: GCCCACCACAAATGCAGTGCACAAGTGCAGAGTGCA...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGGGTCGGAACAAGTCTaGTATTTGATGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKGSEQV*YLMRTS
Trigger: AGACGTCCTCATCAAATAGCAGACTTGTTCCGACCC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGAGGCATGAGCCCCTGTaGCCAGCCTCAGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLRHEPL*PASVSF
Trigger: AAAGCTGACTGAGGCTGGGCACAGGGGCTCATGCCT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCACTCCCCACTGTGGCTaGAGCATAAGTTGCCACACA +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSTPHCG*SISCHT
Trigger: TGTGTGGCAACTTATGCTGCAGCCACAGTGGGGAGT...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCGATACACTCTTGGAATaGTGGGAGCACTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFDTLLE*WEHLPG
Trigger: TCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATC...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATACGGTTCCCATTACTaGCCCAGCAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLYGSHY*PSRYTG
Trigger: CCCTGTGTACCTGCTGGGCCAGTAATGGGAACCGTA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTTTTTTCACCCGGAACTaGAGAAGGAGCACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIFFTRN*RRSTPS
Trigger: TGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAA...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGCAGAAGACCCAGCTGTaGTCAGGTGTCAGAATTACT +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKQKTQL*SGVRIT
Trigger: AGTAATTCTGACACCTGACCACAGCTGGGTCTTCTG...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCATAGTCCTTCAAACATaGGTGCTTGCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFIVLQT*VLAWEA
Trigger: AGCCTCCCAGGCAAGCACCCATGTTTGAAGGACTAT...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGCCGAGAGCCTGTCCATaGAGAATGATGGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWPRACP*RMMVTA
Trigger: GGCAGTAACCATCATTCTCCATGGACAGGCTCTCGG...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGCACTCTTACCAAACTaGCAGACCCTCACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYALLPN*QTLTSS
Trigger: TGAGCTTGTGAGGGTCTGCCAGTTTGGTAAGAGTGC...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAGTGCATGAAGCATCCTaGAGCACTTTCATCACAGGT +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKVHEAS*STFITG
Trigger: ACCTGTGATGAAAGTGCTCCAGGATGCTTCATGCAC...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACGCAATCAGCAGGACATaGGCAGGGACAAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDAISRT*AGTNKG
Trigger: TCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGC...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp GGTGACAGCCTCATAAATGGTTTCCCGAAGTCCCATTaGGCTAGTCTAATTTACCCAACCTCCCCATGCACT +
Preference number: 4 (lower is better)
Translates to: GDSLINGFPKSH*ASLIYPTSPCT
Trigger: AGTGCATGGGGAGGTTGGGTAAATTAGACTAGCCAAATGGGACTTCGGGAAACCATTTATGAGGCTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp GACAAGGGGAAGTGTCCCAAGATAGGTCTCCTTCACTaGGCGGGAACTTTTAACTTCTTCAGTCTTCCCATG +
Preference number: 4 (lower is better)
Translates to: DKGKCPKIGLLH*AGTFNFFSLPM
Trigger: CATGGGAAGACTGAAGAAGTTAAAAGTTCCCGCCAAGTGAAGGAGACCTATCTTGGGACACTTCCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACTTGTGTAGGCTGCACTaGGAGTCAGGGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDLCRLH*ESGCHH
Trigger: ATGGTGACACCCTGACTCTCAGTGCAGCCTACACAA...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACGTTCCTTCCTGCTCATaGCACCGGTGTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CSNCAIFFPLGAKCHGSNVPSCS*HRCLGP
Trigger: TGGACCCAGACACCGGTGTCATGAGCAGGAAGGAAC...GTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR TCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGGGGACATTGAAGCATTaGGACACCAGAAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLGTLKH*DTRSPK
Trigger: TTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCC...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTCATTGCGTACCTCATaGACAGGGGCAATAACACAT +
Preference number: 4 (lower is better)
Translates to: LPAHPLFLFLFFSFSNEWSLRTS*TGAITH
Trigger: ATGTGTTATTGCCCCTGTTCATGAGGTACGCAATGA...CCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTCCAGGGGTCCTCCATaGCTACACAACCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYSRGPP*LHNHPP
Trigger: AGGAGGATGGTTGTGTAGTCATGGAGGACCCCTGGA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACCACTCCGTCATTAGCTaGGGGGAATGGCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYHSVIS*GEWQGS
Trigger: GGATCCTTGCCATTCCCCTCAGCTAATGACGGAGTG...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGCACTCCGTCATTAGCTaGGGGGAATGGCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMHSVIS*GEWQGS
Trigger: GGATCCTTGCCATTCCCCTCAGCTAATGACGGAGTG...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACACTTGTTGGGGAAGGTaGTGGCCCAGGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYTCWGR*WPRFSG
Trigger: TCCAGAGAACCTGGGCCATCACCTTCCCCAACAAGT...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACCAAGACCTCCAGCTCTaGGTTTGTGACTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYQDLQL*VCDSPL
Trigger: CAGTGGGGAGTCACAAACTCAGAGCTGGAGGTCTTG...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGATATAGGACAACGGCCTaGATTCCAACAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRYRTTA*IPTASP
Trigger: AGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATA...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCTGCCATCACTGTTGGTaGCAGCCTCATAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVACHHCW*QPHKWF
Trigger: AAACCATTTATGAGGCTGTCACCAACAGTGATGGCA...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATCTGTGGCTTCATTCTTaGAGTCAGCGAGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHLWLHS*SQRDQE
Trigger: TTCTTGGTCTCGCTGACTTCAAGAATGAAGCCACAG...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAGGCCTTGGAAGAGGCTaGATGGGAAGTCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLGLGRG*MGSHFS
Trigger: TGAGAAGTGACTTCCCATTCAGCCTCTTCCAAGGCC...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACGGAATGGCTCGCAAATaGGTCATACGGGCTCAGATC +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDGMARK*VIRAQI
Trigger: GATCTGAGCCCGTATGACTCATTTGCGAGCCATTCC...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACCCAGGCCGTGCACTCTaGACTTGTGCACTGCATTTG +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYPGRAL*TCALHL
Trigger: CAAATGCAGTGCACAAGTGCAGAGTGCACGGCCTGG...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAAATGCTGGGAGCACTTaGCTGGAATTTCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRNAGST*LEFQPA
Trigger: GGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATT...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAAGCAATCTGGTCCTTaGGTCGGAACAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDKQSGP*VGTSLL
Trigger: TAGCAGACTTGTTCCGACCCAAGGACCAGATTGCTT...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGTACGGTTCCCATTACTaGCCCAGCAGGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMYGSHY*PSRYTG
Trigger: CCCTGTGTACCTGCTGGGCCAGTAATGGGAACCGTA...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCTTCTGCTTTGTAGGGTaGAAGGCAACACTAGTTGAG +
Preference number: 4 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVAFCFVG*KATLVE
Trigger: CTCAACTAGTGTTGCCTTCCACCCTACAAAGCAGAA...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAGGGATCCACCAGGATTaGAGACTGACCAATACCAGG +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLGIHQD*RLTNTR
Trigger: CCTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCC...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCAAACCATTACAGCCTTaGTCTTGGCAACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFKPLQP*SWQLWP
Trigger: TGGCCAGAGTTGCCAAGACCAAGGCTGTAATGGTTT...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACTTGTGTAGGCTGCACTaGGAGTCAGGGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYLCRLH*ESGCHH
Trigger: ATGGTGACACCCTGACTCTCAGTGCAGCCTACACAA...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCTTTGCACTGGGACATTaGAGCATTGAGACACCAGAA +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFFALGH*SIETPE
Trigger: TTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAAA...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATTCATTGCGTACCTCATaGACAGGGGCAATAACACAT +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHSLRTS*TGAITH
Trigger: ATGTGTTATTGCCCCTGTTCATGAGGTACGCAATGA...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCCAAACCTTGGGTTTCTaGTTGCTCCCTACCTATTGG +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSQTLGF*LLPTYW
Trigger: CCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTG...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGCTTGGCAACTACTCTaGGATTCTAGAGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNAWQLL*DSRGHW
Trigger: CCAGTGACCTCTAGAATCTCAGAGTAGTTGCCAAGC...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGCCTTTAAATCTCACTaGCAGAAAGCTTGGCAACTA +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKAFKSH*QKAWQL
Trigger: TAGTTGCCAAGCTTTCTGTCAGTGAGATTTAAAGGC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAAGAGCCTTTTGCCTTTaGAGAGAAGTGAGGCACGCA +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLRAFCL*REVRHA
Trigger: TGCGTGCCTCACTTCTCTTCAAAGGCAAAAGGCTCT...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACGAAGGCAACACTAGTTaGGAGGACTTGCAACAGAAA +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDEGNTS*EDLQQK
Trigger: TTTCTGTTGCAAGTCCTCTCAACTAGTGTTGCCTTC...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAGTAAAGGAGCATGACTaGGGACCAGCAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLVKEHD*GPARVN
Trigger: ATTCACCCTTGCTGGTCCTCAGTCATGCTCCTTTAC...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTGCACTCTGCACTTGTaGACTGCATTTGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYCTLHL*TAFVVG
Trigger: GCCCACCACAAATGCAGTGCACAAGTGCAGAGTGCA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCTCCAGCACAAAATACTaGCCAAAGAGTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGSSTKY*PKSGDF
Trigger: AAAATCACCACTCTTTGGGCAGTATTTTGTGCTGGA...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCGTGGTAGTGACAGGATaGAAGTCTGCGCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCVVVTG*KSALLV
Trigger: TACCAAGAGCGCAGACTTGCATCCTGTCACTACCAC...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTACCTCATGCCAAGCATaGAGAAAACAAACTGTAATA +
Preference number: 4 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPTSCQA*RKQTVI
Trigger: TATTACAGTTTGTTTTCTGCATGCTTGGCATGAGGT...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATCCTTGGGTTTCTGATTaGTCCCTACCTATTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYPWVSD*SLPIGY
Trigger: ATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGG...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATTTCGTGTGTATAAGTTaGTGCCCTCGTCTTTCGGTT +
Preference number: 4 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYFVCIS*CPRLSV
Trigger: AACCGAAAGACGAGGGCAGCAACTTATACACACGAA...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGGCTCACTGGCATTCTaGCTAGAGATCAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNGSLAF*LEIRGS
Trigger: TGATCCTCTGATCTCTAGGCAGAATGCCAGTGAGCC...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACAGGTCATGTGGAAGGTaGTCCTCCCTTCAACCCAGT +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYRSCGR*SSLQPS
Trigger: ACTGGGTTGAAGGGAGGAGCACCTTCCACATGACCT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTGGATCAAGAATGGGCTaGTGTCTGAGTAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIGSRMG*CLSKQS
Trigger: AGATTGCTTACTCAGACACCAGCCCATTCTTGATCC...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CAATTCCTCAGCTGTGTTTGGAGGAAGAGCAGAGTTATAGTCAGAGCTGTGGCCAGAAGAAAAGGGAAGTaGCATTCCAGCCATATTTGG +
Preference number: 4 (lower is better)
Translates to: QFLSCVWRKSRVIVRAVARRKGK*HSSHIW
Trigger: CCAAATATGGCTGGAATGCCACTTCCCTTTTCTTCT...GGCCACAGCTCTGACTATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGTCCCATTATATTTTCTaGGCTGGTCTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKSHYIF*AGLKLL
Trigger: CAGGAGTTTGAGACCAGCCCAGAAAATATAATGGGA...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATCAATCTCCCGCTCCTaGGCTCAACCAATCCTTCTA +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLSISRS*AQPILL
Trigger: TAGAAGGATTGGTTGAGCCCAGGAGCGGGAGATTGA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCAGAGCCACCAAACCTTaGGTTTCTGATTGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSRATKP*VSDCSL
Trigger: TAGGGAGCAATCAGAAACCCAAGGTTTGGTGGCTCT...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATCGAGGGTGGATATTTTaGCCTGATCTCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: FDTLLECWEHLPGISACHRGWIF*PDLKHL
Trigger: CAGATGTTTGAGATCAGGCCAAAATATCCACCCTCG...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGATTCCAAGAACATCTGTaGTACCGAGCCAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGFQEHL*YRARFF
Trigger: GAAGAATCTGGCTCGGTACCACAGATGTTCTTGGAA...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTTCCAGACGACAGGAATaGCTCGCAAATGAGTCATAC +
Preference number: 4 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSSRRQE*LANESY
Trigger: GTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGA...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATGGTCTTGGCAACTCTaGCCACAGAAGAACCTCCAA +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLWSWQL*PQKNLQ
Trigger: TTGGAGGTTCTTCTGTGGCCAGAGTTGCCAAGACCA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATTACAGCCTTGGTCTTaGCAACTCTGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLLQPWS*QLWPQK
Trigger: CTTCTGTGGCCAGAGTTGCCAAGACCAAGGCTGTAA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp CCACCAAACCTTGGGTTTCTGATTGCTCCCTACCTATaGGCTATTCCCAGAGAGCCCATATTCACATGGTTT +
Preference number: 4 (lower is better)
Translates to: PPNLGFLIAPYL*AIPREPIFTWF
Trigger: AAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAATCAGAAACCCAAGGTTTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATGTTTCCCTCCTGGTTaGTCACAAGCCAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLCFPPG*SQAKTC
Trigger: ACAGGTTTTGGCTTGTGATCAACCAGGAGGGAAACA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCATGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCGAATGGGCTGGTGTCTaGGTAAGCAATCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PCSNCAIFFPLGAKCHGSEWAGV*VSNLVL
Trigger: AAGGACCAGATTGCTTACTCAGACACCAGCCCATTC...GCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR TCA 90 bp AAAGCTAGCCCGGGGCTTGAGAAGAAAAGGGAAGTGGCATTCCAGCCATATTTGATAGACATCGCATCCTaGAATTACAATATTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KASPGLEKKREVAFQPYLIDIAS*NYNIGP
Trigger: AGGCCCAATATTGTAATTTCAGGATGCGATGTCTAT...CAAATATGGCTGGAATGCCACTTCCCTTTTCTTCTCAAGCCCCGGGCTAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACAAATCCAATGCTGTCTaGGAAGCAGCAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYKSNAV*EAAGPD
Trigger: ATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTT...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACACACAACCATCCTCCTaGGCACCTTTAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNTQPSS*APLGNP
Trigger: TGGATTTCCTAAAGGTGCTCAGGAGGATGGTTGTGT...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACTGCTGTTGTAAGATCTaGAAGTCTGGGATGGCCTAC +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDCCCKI*KSGMAY
Trigger: GTAGGCCATCCCAGACTTTCAGATCTTACAACAGCA...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGAAAGGTAAAGGAGCATaGCTGAGGACCAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLKGKGA*LRTSKG
Trigger: ACCCTTGCTGGTCCTCAGTCATGCTCCTTTACCTTT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACGGGTCGGAACAAGTCTaGTATTTGATGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDGSEQV*YLMRTS
Trigger: AGACGTCCTCATCAAATAGCAGACTTGTTCCGACCC...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACAACGGCAGGGGTCGGAACAAGTCTaGTATTTGATGAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: LCYILSIRGKMSWKQQRQGSEQV*YLMRTS
Trigger: AGACGTCCTCATCAAATAGCAGACTTGTTCCGACCC...CTGCCGTTGTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR GCA 90 bp CTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTCCAGCACAAAATACTaGCCAAAGAGTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: LPAHPLFLFLFFSFSNEWSSTKY*PKSGDF
Trigger: AAAATCACCACTCTTTGGGCAGTATTTTGTGCTGGA...CCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACGTGGTAGTGACAGGATaGAAGTCTGCGCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYVVVTG*KSALLV
Trigger: TACCAAGAGCGCAGACTTGCATCCTGTCACTACCAC...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGAACAATCTCTGTTCTTaGAGACAGCAAAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: EGHLSLYAISKASPGLEKNNLCS*RQQSTV
Trigger: TACTGTGCTTTGCTGTCTGCAAGAACAGAGATTGTT...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGAAAGAGCAGTCTAGGATaGTCTGTAAAGGTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGKSSLG*SVKVKE
Trigger: CTCCTTTACCTTTACAGAGCATCCTAGACTGCTCTT...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACAAGCAATCTGGTCCTTaGGTCGGAACAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNKQSGP*VGTSLL
Trigger: TAGCAGACTTGTTCCGACCCAAGGACCAGATTGCTT...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACCACTTTGATGGTCCCTaGGTTTTCCAGCACAAAATA +
Preference number: 4 (lower is better)
Translates to: PTHSSSFSSSLSLTSGSDHFDGP*VFQHKI
Trigger: TATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTG...GTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCCGGGGCACAGAGAAGTaGCTGTTAGTTCTTACAAGT +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCRGTEK*LLVLTS
Trigger: ACTTGTAAGAACTAACAGCCACTTCTCTGTGCCCCG...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp GAAGAGGCTGAATGGGAAGTCACTTCTCAGTCCTTTTaGTTACTTTACACAACCTACAGCCTGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EEAEWEVTSQSF*LLYTTYSLSRK
Trigger: CTTCCTGGACAGGCTGTAGGTTGTGTAAAGTAACAAAAAGGACTGAGAAGTGACTTCCCATTCAGCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTATAGACATCGCATCCTaGAATTACAATATTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQNSELFHPELEKEHSVIIDIAS*NYNIGP
Trigger: AGGCCCAATATTGTAATTTCAGGATGCGATGTCTAT...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAGGGACATTGAAGCATTaGGACACCAGAAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRGTLKH*DTRSPK
Trigger: TTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCC...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCTTTGCACTGGGACATTaGAGCATTGAGACACCAGAA +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCFALGH*SIETPE
Trigger: TTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAAA...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACACACAACCATCCTCCTaGGCACCTTTAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYTQPSS*APLGNP
Trigger: TGGATTTCCTAAAGGTGCTCAGGAGGATGGTTGTGT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGATGGGTTGCTTTAATTTaGTACACTCTTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGWVALI*YTLGML
Trigger: CAGCATTCCAAGAGTGTATCAAATTAAAGCAACCCA...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAAATCAAGGTCTGGTCTaGGAGCCACTCTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLNQGLV*EPLCHF
Trigger: AAAATGACAGAGTGGCTCTCAGACCAGACCTTGATT...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTCCACTGTGGTTAAAATaGATCTGGAACAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSPLWLK*IWNKPS
Trigger: TGATGGCTTGTTCCAGATGCATTTTAACCACAGTGG...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACGTGTGTATAAGTTGCTaGCCTCGTCTTTCGGTTGGA +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYVCISC*PRLSVG
Trigger: TCCAACCGAAAGACGAGGGCAGCAACTTATACACAC...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAATCCACCATCATGGGTTaGTTTAATTTGATACACTCT +
Preference number: 4 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKSTIMG*FNLIHS
Trigger: AGAGTGTATCAAATTAAAGCAACCCATGATGGTGGA...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCCTAGAGGATTATAAATaGACCAGTCAGTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFLEDYK*TSQCSV
Trigger: CACAGAACACTGACTGGTGCATTTATAATCCTCTAG...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCACCATGTTTCCCTCCTaGTTGATCACAAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCTMFPS*LITSQN
Trigger: GTTTTGGCTTGTGATCAACCAGGAGGGAAACATGGT...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp AACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACAACGGCAAGCAATCTGGTCCTTaGGTCGGAACAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: NCAIFFPLGAKCHGSNNGKQSGP*VGTSLL
Trigger: TAGCAGACTTGTTCCGACCCAAGGACCAGATTGCTT...GCCGTTGTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CCA 90 bp CTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACAACGGCAGGGATCAAGAATGGGCTaGTGTCTGAGTAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LCYILSIRGKMSWKQQRQGSRMG*CLSKQS
Trigger: AGATTGCTTACTCAGACACCAGCCCATTCTTGATCC...CTGCCGTTGTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CCA 90 bp CTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGCACTTTCATCACAGGTaGTTTTGTAACTTACATCAC +
Preference number: 4 (lower is better)
Translates to: LPAHPLFLFLFFSFSNEWHFHHR*FCNLHH
Trigger: GTGATGTAAGTTACAAAACCACCTGTGATGAAAGTG...CCACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCGTGAATGCACTAGACTaGCCAACAAATAACCAAATG +
Preference number: 4 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGVNALD*PTNNQM
Trigger: CATTTGGTTATTTGTTGGCCAGTCTAGTGCATTCAC...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp GCACGCAGGACTTTCCAAACTTACTGGTCCATGGAATaGTTTTTAGAAGCATCCCGAAAGGCAAACTTTCAG +
Preference number: 4 (lower is better)
Translates to: ARRTFQTYWSME*FLEASRKANFQ
Trigger: CTGAAAGTTTGCCTTTCGGGATGCTTCTAAAAACAATTCCATGGACCAGTAAGTTTGGAAAGTCCTGCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCAGTAATGCTACTTGCTaGACACTTCGCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCSNATC*TLRFVS
Trigger: TGAGACAAAGCGAAGTGTTCAGCAAGTAGCATTACT...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGCATAAAACAAGCACATaGACCTCTTTGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWHKTST*TSLLRT
Trigger: AGTTCTGAGCAAAGAGGTGCATGTGCTTGTTTTATG...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGGGATCAAGAATGGGCTaGTGTCTGAGTAAGCAATCT +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLGSRMG*CLSKQS
Trigger: AGATTGCTTACTCAGACACCAGCCCATTCTTGATCC...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACCACTTTGATGGTCCCTaGGTTTTCCAGCACAAAATA +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDHFDGP*VFQHKI
Trigger: TATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTG...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCAGAAGAAAAGGGAAGTaGCATTCCAGCCATATTTGG +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCRRKGK*HSSHIW
Trigger: CCAAATATGGCTGGAATGCCACTTCCCTTTTCTTCT...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGAATTCCTCCAATGTTATaGCATCCAGACGACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRIPPML*HPDDRN
Trigger: ATTCCTGTCGTCTGGATGCCATAACATTGGAGGAAT...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp ATCAATTATTCATGTGTTTACAAAGAGCTTTCCCGGTaGATGTTAACCAGAGCTGCCTGCAACGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: INYSCVYKELSR*MLTRAACNEEL
Trigger: GAGCTCTTCGTTGCAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGTGCATGTTTGGAAAATaGTCCCGAAGAAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMCMFGK*SRRKRV
Trigger: CACTCTCTTTCTTCGGGATCATTTTCCAAACATGCA...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACCCACTGTGGTTAAAATaGATCTGGAACAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYPLWLK*IWNKPS
Trigger: TGATGGCTTGTTCCAGATGCATTTTAACCACAGTGG...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp CCATGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCCCACTGTGGTTAAAATaGATCTGGAACAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: PCSNCAIFFPLGAKCHGSPLWLK*IWNKPS
Trigger: TGATGGCTTGTTCCAGATGCATTTTAACCACAGTGG...GCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR GCA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACCTCCACAATAAATCTTaGTACTGCTCACTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYLHNKS*YCSLWV
Trigger: GACCCAAAGTGAGCAGTAGCAAGATTTATTGTGGAG...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTATGGTTAAAATGCATCTaGAACAAGCCATCACCCTTT +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLWLKCI*NKPSPF
Trigger: AAAGGGTGATGGCTTGTTCCAGATGCATTTTAACCA...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACTGGTTAAAATGCATCTaGAACAAGCCATCACCCTTT +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNWLKCI*NKPSPF
Trigger: AAAGGGTGATGGCTTGTTCCAGATGCATTTTAACCA...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CCA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACCCCTCGTCTTTCGGTTaGAAGTTTCTAACATTTTCT +
Preference number: 4 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDPSSFG*KFLTFS
Trigger: AGAAAATGTTAGAAACTTCCAACCGAAAGACGAGGG...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGAATTTGATACACTCTTaGAATGCTGGGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLNLIHS*NAGSTC
Trigger: GCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAATT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTACTTTCAGAATTCCATaGACCAATAAAACACGGGAA +
Preference number: 4 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSTFRIP*TNKTRE
Trigger: TTCCCGTGTTTTATTGGTCCATGGAATTCTGAAAGT...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTTCAGAGAAAGTGGTTaGAGCAAACAATCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYFRESG*SKQSLF
Trigger: GAACAGAGATTGTTTGCTTCAACCACTTTCTCTGAA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACTTTGTCCTTGGGACATaGAAACACTCTTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYFVLGT*KHSSVI
Trigger: AATGACAGAAGAGTGTTTTCATGTCCCAAGGACAAA...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGTGAACAATCTTACTTaGCATCCCCAAGACATTTAT +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNVNNLT*HPQDIY
Trigger: ATAAATGTCTTGGGGATGTCAAGTAAGATTGTTCAC...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGACAATTTAATTTTCATTaGGTACCTCATGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRQFNFH*VPHEQG
Trigger: CCCCTGTTCATGAGGTACGCAATGAAAATTAAATTG...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTACAATTTAATTTTCATTaGGTACCTCATGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLQFNFH*VPHEQG
Trigger: CCCCTGTTCATGAGGTACGCAATGAAAATTAAATTG...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGTCCCCAATTTCTTTCTaGCTTCGTGTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMSPISF*LRVYKL
Trigger: CAACTTATACACACGAAGGCAGAAAGAAATTGGGGA...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGTTACATCACAGGTATTaGTGTAAGGGCAAGGTTAGA +
Preference number: 4 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMLHHRY*CKGKVR
Trigger: TCTAACCTTGCCCTTACAGCAATACCTGTGATGTAA...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGGAGCCCATATTCACATaGTTTCCTAAATCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLEPIFT*FPKSCV
Trigger: TACACAGGATTTAGGAAACCATGTGAATATGGGCTC...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGGTTAAAATTTGTCCTTaGGACATGAAAACACTCTTC +
Preference number: 4 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWVKICP*DMKTLF
Trigger: GAAGAGTGTTTTCATGTCCCAAGGACAAATTTTAAC...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCACTGAGGGCAGATTATaGTTGTTAAAATTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSTEGRL*LLKFVL
Trigger: AAGGACAAATTTTAACAACCATAATCTGCCCTCAGT...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR TCA 90 bp TGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACATAGACATCGCATCCTaGAATTACAATATTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSNCAIFFPLGAKCHGSNIDIAS*NYNIGP
Trigger: AGGCCCAATATTGTAATTTCAGGATGCGATGTCTAT...GTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACGTCTTGTCATTTAAGTaGCTTACTGAAGTCCTACTA +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYVLSFK*LTEVLL
Trigger: TAGTAGGACTTCAGTAAGTCACTTAAATGACAAGAC...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR TCA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACACAAATAACCAAATGTaGGTGAATTTGACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYTNNQM*VNLTCL
Trigger: TAGGCAGGTCAAATTCACTCACATTTGGTTATTTGT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACAGTTCTGAAACACCATaGTTCAAGTGTTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNSSETP*FKCCHF
Trigger: AAAATGACAACACTTGAAGCATGGTGTTTCAGAACT...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR GCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGCTAAAGGATTGTAAATaGACCAATCAGCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLLKDCK*TNQHSV
Trigger: TACAGAGTGCTGATTGGTGCATTTACAATCCTTTAG...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACCTAAAGGATTGTAAATaGACCAATCAGCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNLKDCK*TNQHCK
Trigger: TTTACAGTGCTGATTGGTGCATTTACAATCCTTTAG...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CCA 90 bp TACCCATGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGATGGTTAAAATGCATCTaGAACAAGCCATCACCCTTT +
Preference number: 4 (lower is better)
Translates to: YPCSNCAIFFPLGAKCHGWLKCI*NKPSPF
Trigger: AAAGGGTGATGGCTTGTTCCAGATGCATTTTAACCA...TCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCATGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443880.1
3UTR CAA 72 bp GTCCCATTAGTAATGCTACTTGCTGAACACTTCGCTTaGTCTCAATCTATCTGTAGTTTCAACATCAACTGG +
Preference number: 4 (lower is better)
Translates to: VPLVMLLAEHFA*SQSICSFNINW
Trigger: CCAGTTGATGTTGAAACTACAGATAGATTGAGACAAAGCGAAGTGTTCAGCAAGTAGCATTACTAATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR GCA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGAGTTCTGAAACACCATaGTTCAAGTGTTGTCATTTT +
Preference number: 4 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLSSETP*FKCCHF
Trigger: AAAATGACAACACTTGAAGCATGGTGTTTCAGAACT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp TGTGGTACCGAGCCAGATTCTTCCTCTTGCTTGAAATaGGGTAACTTTAGATATCATCATAACTCATTCATC +
Preference number: 4 (lower is better)
Translates to: CGTEPDSSSCLK*GNFRYHHNSFI
Trigger: GATGAATGAGTTATGATGATATCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATCTGGCTCGGTACCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp AACATCTGTGGTACCGAGCCAGATTCTTCCTCTTGCTaGAAATTGGGTAACTTTAGATATCATCATAACTCA +
Preference number: 4 (lower is better)
Translates to: NICGTEPDSSSC*KLGNFRYHHNS
Trigger: TGAGTTATGATGATATCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATCTGGCTCGGTACCACAGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
3UTR CAA 72 bp ACTTGCATTTATCTTGGCCACATTAACGAGATCTGTTaGACCAATACATTTATATTTATGATGACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TCIYLGHINEIC*TNTFIFMMTEG
Trigger: GCCCTCAGTCATCATAAATATAAATGTATTGGTCAAACAGATCTCGTTAATGTGGCCAAGATAAATGCAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS GCA 90 bp CACTGTGCCCACCTGCTGCAGCAGCCGCCGGCGCCGCGTGGGCCATaGGCGGCGCCAGGCGACAGCCCCCAGCGCCACCGCGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: HCAHLLQQPPAPRGP*AAPGDSPQRHRGQA
Trigger: GGCCTGACCGCGGTGGCGCTGGGGGCTGTCGCCTGGCGCCGCGCATGGCCCACGCGGCGCCGGCGGCTGCTGCAGCAGGTGGGCACAGTG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 90 bp GGCGGTAGGGCTGTGACTTCAGGAAGCTGGTTATCCACTGGGCGGTaGCCTCGCCACAGTCCCTGCCCTCTATCTCCAGGCCGTGCACTC +
Preference number: 5 (lower is better)
Translates to: GGRAVTSGSWLSTGR*PRHSPCPLSPGRAL
Trigger: GAGTGCACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCACAGCCCTACCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS CCA 90 bp GAGGCTCGAAGTGCACCAGGCGGTAGGGCTGTGACTTCAGGAAGCTaGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCCTGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: EARSAPGGRAVTSGS*LSTGRWPRHSPCPL
Trigger: TAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCACAGCCCTACCGCCTGGTGCACTTCGAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS TCA 90 bp TCTCGGTCGCATGTGAGGCTCGAAGTGCACCAGGCGGTAGGGCTGTaGCTTCAGGAAGCTGGTTATCCACTGGGCGGTGGCCTCGCCACA +
Preference number: 5 (lower is better)
Translates to: SRSHVRLEVHQAVGL*LQEAGYPLGGGLAT
Trigger: TGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCACAGCCCTACCGCCTGGTGCACTTCGAGCCTCACATGCGACCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS GCA 90 bp TCAGGAAGCTGGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGTGCACTCTGCACTTGTGCACTGCAT +
Preference number: 5 (lower is better)
Translates to: SGSWLSTGRWPRHSP*PLSPGRALCTCALH
Trigger: ATGCAGTGCACAAGTGCAGAGTGCACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS GCA 90 bp TCAGGAAGCTGGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGTGCACTCAAATATCTAGGTATGGAG +
Preference number: 5 (lower is better)
Translates to: SGSWLSTGRWPRHSP*PLSPGRALKYLGME
Trigger: CTCCATACCTAGATATTTGAGTGCACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CCA 90 bp GTGTCACCATCGCAGGTCAGGGAAATCAGGACCAGGCGAGGTTCCTaGCGAGCAGTAACCATGTTTCCCTCCTGGTTGATCACAAGCCAA +
Preference number: 5 (lower is better)
Translates to: VSPSQVREIRTRRGS*RAVTMFPSWLITSQ
Trigger: TTGGCTTGTGATCAACCAGGAGGGAAACATGGTTACTGCTCGCCAGGAACCTCGCCTGGTCCTGATTTCCCTGACCTGCGATGGTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000492847.1
CDS-3UTR CAA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACATTGCTCCCTACCTATaGGCTATTCCCAGAGAGCCC +
Preference number: 5 (lower is better)
Translates to: RASYPESLSMENDGYCPDIAPYL*AIPREP
Trigger: GGGCTCTCTGGGAATAGCCAATAGGTAGGGAGCAAT...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACCCACCCGGGCCGGGATaGCGCGAGGAGGACAAAGCG +
Preference number: 5 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYPPGPG*REEDKA
Trigger: CGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGGTGG...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACTTTGTGGTGGGCGTTTaGATAGGCAGTAGTAGGTCC +
Preference number: 5 (lower is better)
Translates to: RASYPESLSMENDGYCPDFVVGV*IGSSRS
Trigger: GGACCTACTACTGCCTATCAAAACGCCCACCACAAA...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACTGCAAGTCTGCGCTCTaGGTAGATAAACGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: RASYPESLSMENDGYCPDCKSAL*VDKRRS
Trigger: GCTTCTCCGTTTATCTACCAAGAGCGCAGACTTGCA...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CTCGGACTAACAAGCGGCTTTAATTGCTGGGCAGGTCATGTGGAAGGTGCTCCTTGGCTGCAGCATAAGTaGCCACACAGAGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: LGLTSGFNCWAGHVEGAPWLQHK*PHRGDA
Trigger: GGCATCTCCTCTGTGTGGCAACTTATGCTGCAGCCA...AGGAGCACCTTCCACATGACCTGCCCAGCAATTAAAGCCGCTTGTTAGTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACATTACAGCCTTGGTCTaGGCAACTCTGGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: RASYPESLSMENDGYCPDITALV*ATLATE
Trigger: TTCTGTGGCCAGAGTTGCCAAGACCAAGGCTGTAAT...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS TCA 90 bp ACGGTTCCCATTACTGGCCCAGCAGGTACACAGGGTCTCCCACTTTaGTGGTCCCTGGGTTTTCCAGCACAAAATACTGCCCAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: TVPITGPAGTQGLPL*WSLGFPAQNTAQRV
Trigger: CACTCTTTGGGCAGTATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGTGTACCTGCTGGGCCAGTAATGGGAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS-3UTR CAA 90 bp CTTTCTGCCTTCGTGTGTATAAGTTGCTGCCCTCGTCTTTCGGTTGGAAGTTTCTTCTCTAGCCTGGAGTaGAGATCCGCCAGCGACGCC +
Preference number: 5 (lower is better)
Translates to: LSAFVCISCCPRLSVGSFFSSLE*RSASDA
Trigger: GGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGAA...GAAACTTCCAACCGAAAGACGAGGGCAGCAACTTATACACACGAAGGCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCGCTAACTGGGATTCCTaGGCTCACTGGCATTCTGCC +
Preference number: 5 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGANWDS*AHWHSA
Trigger: GGCAGAATGCCAGTGAGCCAAGGAATCCCAGTTAGC...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 90 bp TGTCATGGAAGCAACAACGGCAGACTCCAGCCATTCCTTCAACCATaGGGATCAGTGTGTACGTCACTTTCCCTCTTCAGTGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CHGSNNGRLQPFLQP*GSVCTSLSLFSVSS
Trigger: GCTGGAAACACTGAAGAGGGAAAGTGACGTACACACTGATCCCCATGGTTGAAGGAATGGCTGGAGTCTGCCGTTGTTGCTTCCATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CAA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACTTCTCTAGCCTGGAGTaGAGATCCGCCAGCGACGCC +
Preference number: 5 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNFSSLE*RSASDA
Trigger: GGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGAA...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATACAGGGTCTCCCACTTaGATGGTCCCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYTGSPT*MVPGFS
Trigger: GGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGT...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATCATCAACTGGACTTGTaGGGGAAGGTGATGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYHQLDL*GKVMAQ
Trigger: CTGGGCCATCACCTTCCCCAACAAGTCCAGTTGATG...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCACAGAATTCAGAACTTTTTCACCCGGAACTGGAGAAGGAGCACTCCGTCATTGGAGCCTGGCCCACATaGTCCTTTTCAAGACCTCCA +
Preference number: 5 (lower is better)
Translates to: PQNSELFHPELEKEHSVIGAWPT*SFSRPP
Trigger: TGGAGGTCTTGAAAAGGACAATGTGGGCCAGGCTCC...AATGACGGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAATTCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TGGGCAGGGACAAATAAGGGAATAAAAGGTGGCCACCCCAGCCAGCAGCAGCAGTACTGGTCCATGGAATaGTTTTTAGAAGCATCCCGA +
Preference number: 5 (lower is better)
Translates to: WAGTNKGIKGGHPSQQQQYWSME*FLEASR
Trigger: TCGGGATGCTTCTAAAAACAATTCCATGGACCAGTA...CTGCTGCTGCTGGCTGGGGTGGCCACCTTTTATTCCCTTATTTGTCCCTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGAGGGATCCACCAGGATaGGAGACTGACCAATACCAG +
Preference number: 5 (lower is better)
Translates to: EGHLSLYAISKASPGLEKRDPPG*ETDQYQ
Trigger: CTGGTATTGGTCAGTCTCCAATCCTGGTGGATCCCT...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCAAAGAGCTTTCCCGGTaGATGTTAACCAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGKELSR*MLTRAA
Trigger: GGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTT...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp GTATTTCTCCCTATAGGACAACGGCCTGAATTCCAACAGCCTCCCCTTCCCCAAATGTTTCCCTCCTGGTaGATCACAAGCCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: VFLPIGQRPEFQQPPLPQMFPSW*ITSQNL
Trigger: CAGGTTTTGGCTTGTGATCAACCAGGAGGGAAACAT...TTGGGGAAGGGGAGGCTGTTGGAATTCAGGCCGTTGTCCTATAGGGAGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCCCGTGCACTCTGCACTaGTGCACTGCATTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSPCTLH*CTAFVV
Trigger: CACCACAAATGCAGTGCACAAGTGCAGAGTGCACGG...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAAGAACAAGTCTGCTATTaGATGAGGACGTCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKEQVCY*MRTSRS
Trigger: CGACCGAGACGTCCTCATCAAATAGCAGACTTGTTC...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACAACGGCAGATTCTCTAGCCTGGAGTaGAGATCCGCCAGCGACGCC +
Preference number: 5 (lower is better)
Translates to: CAIFFPLGAKCHGSNNGRFSSLE*RSASDA
Trigger: GGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGAA...TCTGCCGTTGTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CAA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTACAGGGTCTCCCACTTaGATGGTCCCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSTGSPT*MVPGFS
Trigger: GGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGT...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGTGCAAGTCTGCGCTCTaGGTAGATAAACGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: EGHLSLYAISKASPGLEKCKSAL*VDKRRS
Trigger: GCTTCTCCGTTTATCTACCAAGAGCGCAGACTTGCA...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCGAATGCTGGGAGCACTaGCCTGGAATTTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSECWEH*PGISAC
Trigger: GCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTC...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp GCAGCCCATTTGGGTCCCCTTCCGAAGCTTTGTTCTTTCGCTCTCCACAATAAACCTCTCCAGAGCCTTTaGCCTTTGAAGAGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: AAHLGPLPKLCSFALHNKPLQSL*PLKRSE
Trigger: CTCACTTCTCTTCAAAGGCAAAAGGCTCTGGAGAGG...TTTATTGTGGAGAGCGAAAGAACAAAGCTTCGGAAGGGGACCCAAATGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCAATGTTATGGCATCCAGACGACAGGAATGGCTCGCAAATGAGTCATACGGGCTGGGACATTGAAGCATaGAGACACCAGAAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: PMLWHPDDRNGSQMSHTGWDIEA*RHQKSK
Trigger: TTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCA...GCCCGTATGACTCATTTGCGAGCCATTCCTGTCGTCTGGATGCCATAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCCTACCTATTGGCTATTCCCAGAGAGCCCATATTCACATGGTTTCCTAAATCCCAACATCAACTGGACTaGTTGGGGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: PYLLAIPREPIFTWFPKSQHQLD*LGKVMA
Trigger: GGCCATCACCTTCCCCAACAAGTCCAGTTGATGTTG...GGATTTAGGAAACCATGTGAATATGGGCTCTCTGGGAATAGCCAATAGGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGAGCTAGCTACCCCGAGAGCCTGTCCATGGAGAATGATGGTTACTGCCCGGACTGTGAACAATCTTACTaGACATCCCCAAGACATTTA +
Preference number: 5 (lower is better)
Translates to: RASYPESLSMENDGYCPDCEQSY*TSPRHL
Trigger: TAAATGTCTTGGGGATGTCAAGTAAGATTGTTCACA...GTCCGGGCAGTAACCATCATTCTCCATGGACAGGCTCTCGGGGTAGCTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 90 bp GTCAGTGGAAATAGCAGGACTGTTGCTTATATTGTTCACAGGGCATaGAGTTCAGCTGAGCAACACACAGTGCCACTTATACTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VSGNSRTVAYIVHRA*SSAEQHTVPLILCQ
Trigger: CTGGCAGAGTATAAGTGGCACTGTGTGTTGCTCAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACAGTCCTGCTATTTCCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS-3UTR CAA 90 bp GAAGGTCACCTCAGTCTTTATGCCATTTCAAAAGCTAGCCCGGGGCTTGAGAAGGCCCTCGTCTTTCGGTaGGAAGTTTCTAACATTTTC +
Preference number: 5 (lower is better)
Translates to: EGHLSLYAISKASPGLEKALVFR*EVSNIF
Trigger: GAAAATGTTAGAAACTTCCAACCGAAAGACGAGGGC...CTTCTCAAGCCCCGGGCTAGCTTTTGAAATGGCATAAAGACTGAGGTGACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TCTTTCTCTTCTTCTCTTTCTCTAACGAGTGGTAGTGACAGGATGCAAGTCTGCGAACAAGTCTGCTATTaGATGAGGACGTCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: SFSSSLSLTSGSDRMQVCEQVCY*MRTSRS
Trigger: CGACCGAGACGTCCTCATCAAATAGCAGACTTGTTC...GCAGACTTGCATCCTGTCACTACCACTCGTTAGAGAAAGAGAAGAAGAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTACTTCGTGTGTATAAGTaGCTGCCCTCGTCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLLRVYK*LPSSFG
Trigger: ACCGAAAGACGAGGGCAGCAACTTATACACACGAAG...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CCTTTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATTTCCCGAAGTCCCATTaGGCTAGTCTAATTTACCCA +
Preference number: 5 (lower is better)
Translates to: PLGNPMLSEKQQGQIQIYFPKSH*ASLIYP
Trigger: TGGGTAAATTAGACTAGCCAAATGGGACTTCGGGAA...ATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AATGGAGCAATCAGCAGGACATGGGCAGGGACAAATAAGGGAATAAAAGGTGGCGTCAAAAACAGACCTTaGGGAAGGGCAGCATTAAAC +
Preference number: 5 (lower is better)
Translates to: NGAISRTWAGTNKGIKGGVKNRP*GRAALN
Trigger: GTTTAATGCTGCCCTTCCCAAAGGTCTGTTTTTGAC...GCCACCTTTTATTCCCTTATTTGTCCCTGCCCATGTCCTGCTGATTGCTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGTTTGTGGTGGGCGTTTaGATAGGCAGTAGTAGGTCC +
Preference number: 5 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMFVVGV*IGSSRS
Trigger: GGACCTACTACTGCCTATCAAAACGCCCACCACAAA...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CCATGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCGAACAAGTCTGCTATTaGATGAGGACGTCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: PCSNCAIFFPLGAKCHGSEQVCY*MRTSRS
Trigger: CGACCGAGACGTCCTCATCAAATAGCAGACTTGTTC...GCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CAA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGACCTGAAATTACAATATaGGGCCTGAAGTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGPEITI*GLKLVA
Trigger: AGCAACCAACTTCAGGCCCAATATTGTAATTTCAGG...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATAATGGGATATCAGCTTaGTCTCTGGCATTAACCAAC +
Preference number: 5 (lower is better)
Translates to: FDTLLECWEHLPGISACHNGISA*SLALTN
Trigger: GTTGGTTAATGCCAGAGACAAAGCTGATATCCCATT...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGCTATCAAAAATGGCCTaGGAAGAGGCTGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWLSKMA*EEAEWE
Trigger: TTCCCATTCAGCCTCTTCCAAGGCCATTTTTGATAG...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 90 bp GGAAACTGTGGGCTGAGGTTACAGCTCCCTCATAAGAGAATAGGTTaGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTTGGAATCTT +
Preference number: 5 (lower is better)
Translates to: GNCGLRLQLPHKRIG*AVKRNLNPEDSWNL
Trigger: AAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCAACCTATTCTCTTATGAGGGAGCTGTAACCTCAGCCCACAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS-3UTR CAA 90 bp TTAGGAAATCCAATGCTGTCTGAGAAGCAGCAGGGCCAGATCCAGATCTATGGAATATTGGGCCTGAAGTaGGTTGCTTTAACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGNPMLSEKQQGQIQIYGILGLK*VALTFF
Trigger: GAAGAAAGTTAAAGCAACCAACTTCAGGCCCAATAT...TCCATAGATCTGGATCTGGCCCTGCTGCTTCTCAGACAGCATTGGATTTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CTCTGTTCTTGCAGACAGCAAAGCACAGTAGTGCTTTGTGCAGACATAGATAGATCACTGACAGAAAGCTaGGCAACTACTCTGAGATTC +
Preference number: 5 (lower is better)
Translates to: LCSCRQQSTVVLCADIDRSLTES*ATTLRF
Trigger: GAATCTCAGAGTAGTTGCCAAGCTTTCTGTCAGTGA...TCTATCTATGTCTGCACAAAGCACTACTGTGCTTTGCTGTCTGCAAGAACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGGATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAATTCCTCAGCTGTGTTaGGAGGAAGAGCAGAGTTAT +
Preference number: 5 (lower is better)
Translates to: RIFFQPTHSSSFSSSLSLIPQLC*EEEQSY
Trigger: ATAACTCTGCTCTTCCTCCAAACACAGCTGAGGAAT...TAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CAGAAGAACCTCCAAGAAACGATCATCATTCCTCCAATGTTATGGCATCCAGACATACCAGGTCAGGGATaGGTAGAGGGCATAACAAAT +
Preference number: 5 (lower is better)
Translates to: QKNLQETIIIPPMLWHPDIPGQG*VEGITN
Trigger: ATTTGTTATGCCCTCTACCAATCCCTGACCTGGTAT...GTCTGGATGCCATAACATTGGAGGAATGATGATCGTTTCTTGGAGGTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACAGCACATGCACCTCTTaGCTCAGAACTTTACTTCAG +
Preference number: 5 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYSTCTS*LRTLLQ
Trigger: CTGAAGTAAAGTTCTGAGCAAAGAGGTGCATGTGCT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGATAGGTCTCCTTCACTaGGCGGGAACTTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLIGLLH*AGTFNF
Trigger: GAAGTTAAAAGTTCCCGCCAAGTGAAGGAGACCTAT...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TTTGATACACTCTTGGAATGCTGGGAGCACTTGCCTGGAATTTCAGCCTGCCATGATTCTTCCTCTTGCTaGAAATTGGGTAACTTTAGA +
Preference number: 5 (lower is better)
Translates to: FDTLLECWEHLPGISACHDSSSC*KLGNFR
Trigger: TCTAAAGTTACCCAATTTCAAGCAAGAGGAAGAATC...ATGGCAGGCTGAAATTCCAGGCAAGTGCTCCCAGCATTCCAAGAGTGTATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGGGAGACAAAAGTTAGACTTAACTTAGTTCCCACAGGGATCCACCAGGATTGGAGACTTGCATTTATCTaGGCCACATTAACGAGATCT +
Preference number: 5 (lower is better)
Translates to: RETKVRLNLVPTGIHQDWRLAFI*ATLTRS
Trigger: AGATCTCGTTAATGTGGCCAAGATAAATGCAAGTCT...CCAATCCTGGTGGATCCCTGTGGGAACTAAGTTAAGTCTAACTTTTGTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS GCA 90 bp TGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTTGGAATCTTTaGTCGAAGAGTCTGTATACTACCGTAGCATGTCTAAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: WAVKRNLNPEDSWNL*SKSLYTTVACLSLF
Trigger: GAAAAGGCTTAGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS-3UTR CAA 90 bp TTGCACTGGGACATTGAAGCATTGAGACACCAGAAGTCCAAAAGACGAAAAATGCCTGAAATTACAATATaGGGCCTGAAGTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LHWDIEALRHQKSKRRKMPEITI*GLKLVA
Trigger: AGCAACCAACTTCAGGCCCAATATTGTAATTTCAGG...CATTTTTCGTCTTTTGGACTTCTGGTGTCTCAATGCTTCAATGTCCCAGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACGCTGAACACTTCGCTTaGTCTCAATCTATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYAEHFA*SQSICS
Trigger: ACTACAGATAGATTGAGACAAAGCGAAGTGTTCAGC...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACGAGTATGGGTTGCTTTAATTaGATACACTCTTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: FFQPTHSSSFSSSLSLTSMGCFN*IHSWNA
Trigger: AGCATTCCAAGAGTGTATCAAATTAAAGCAACCCAT...ACTCGTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 90 bp AGAATAGGTTGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTTaGAATCTTTGCTCGAAGAGTCTGTATACTACCGTAGCATGTCTA +
Preference number: 5 (lower is better)
Translates to: RIGWAVKRNLNPEDS*NLCSKSLYTTVACL
Trigger: TAGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCAACCTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS-3UTR CAA 90 bp CGGGGAGTTTTCAGAATCCTGTCTTGTCATTTAAGTGACTTACTGAAGTCCTACATATTGGGCCTGAAGTaGGTTGCTTTAACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RGVFRILSCHLSDLLKSYILGLK*VALTFF
Trigger: GAAGAAAGTTAAAGCAACCAACTTCAGGCCCAATAT...GTAGGACTTCAGTAAGTCACTTAAATGACAAGACAGGATTCTGAAAACTCCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS-3UTR CAA 90 bp TGCAGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACCCTGAAATTACAATATaGGGCCTGAAGTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: CSNCAIFFPLGAKCHGSNPEITI*GLKLVA
Trigger: AGCAACCAACTTCAGGCCCAATATTGTAATTTCAGG...GTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS-3UTR CAA 90 bp GATATTCTTCCAGCCCACCCACTCTTCCTCTTTCTCTTCTTCTCTTTCTCTAACACTTCTCAGTCCTTTTaGTTACTTTACACAACCTAC +
Preference number: 5 (lower is better)
Translates to: DILPAHPLFLFLFFSFSNTSQSF*LLYTTY
Trigger: GTAGGTTGTGTAAAGTAACAAAAAGGACTGAGAAGT...GTTAGAGAAAGAGAAGAAGAGAAAGAGGAAGAGTGGGTGGGCTGGAAGAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp TTATTCATGTGTTTACAAAGAGCTTTCCCGGTTGATGTTAACCAGAGCTGCCTGTTTCACAGTCTAACTTaGTGCCAAGAAGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: LFMCLQRAFPVDVNQSCLFHSLT*CQEVSK
Trigger: CTTACTAACTTCTTGGCACAAAGTTAGACTGTGAAA...CAGGCAGCTCTGGTTAACATCAACCGGGAAAGCTCTTTGTAAACACATGAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGGGAAGTGGCATTCCAGCCATATTTGGGGTGCAATTTAATTTTCATTGCGTACAAAAAGCATGTTGACTaGATAGTCCTTCAAACATGG +
Preference number: 5 (lower is better)
Translates to: REVAFQPYLGCNLIFIAYKKHVD*IVLQTW
Trigger: CCATGTTTGAAGGACTATCAAGTCAACATGCTTTTT...GTACGCAATGAAAATTAAATTGCACCCCAAATATGGCTGGAATGCCACTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS-3UTR CAA 90 bp AGTAACTGTGCTATATTCTTTCCATTAGGGGCAAAATGTCATGGAAGCAACAACATATTGGGCCTGAAGTaGGTTGCTTTAACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SNCAIFFPLGAKCHGSNNILGLK*VALTFF
Trigger: GAAGAAAGTTAAAGCAACCAACTTCAGGCCCAATAT...GTTGTTGCTTCCATGACATTTTGCCCCTAATGGAAAGAATATAGCACAGTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443880.1
CDS CAA 90 bp CGCGGTCAGGCCCAGCGCGGCAACCCCGAGCCACCCGGGCCGGGATaGCGCGAGGAGGACAAAGCGCGCCAGCGCGGAGGAGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RGQAQRGNPEPPGPG*REEDKARQRGGAGG
Trigger: GCCGCCGGCTCCTCCGCGCTGGCGCGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGGTGGCTCGGGGTTGCCGCGCTGGGCCTGACCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CAA 72 bp GCCCAGCGCGGCAACCCCGAGCCACCCGGGCCGGGATaGCGCGAGGAGGACAAAGCGCGCCAGCGCGGAGGA +
Preference number: 6 (lower is better)
Translates to: AQRGNPEPPGPG*REEDKARQRGG
Trigger: TCCTCCGCGCTGGCGCGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGGTGGCTCGGGGTTGCCGCGCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366910.10
CDS CCA 72 bp AGTGCACCAGGCGGTAGGGCTGTGACTTCAGGAAGCTaGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCC +
Preference number: 6 (lower is better)
Translates to: SAPGGRAVTSGS*LSTGRWPRHSP
Trigger: GGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCACAGCCCTACCGCCTGGTGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS GCA 72 bp TGGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGTGCACTCTGCACTTGT +
Preference number: 6 (lower is better)
Translates to: WLSTGRWPRHSP*PLSPGRALCTC
Trigger: ACAAGTGCAGAGTGCACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366910.10
ENST00000407981.6
CDS TCA 72 bp CATGTGAGGCTCGAAGTGCACCAGGCGGTAGGGCTGTaGCTTCAGGAAGCTGGTTATCCACTGGGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: HVRLEVHQAVGL*LQEAGYPLGGG
Trigger: GCCACCGCCCAGTGGATAACCAGCTTCCTGAAGTCACAGCCCTACCGCCTGGTGCACTTCGAGCCTCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS GCA 72 bp TGGTTATCCACTGGGCGGTGGCCTCGCCACAGTCCCTaGCCTCTATCTCCAGGCCGTGCACTCAAATATCTA +
Preference number: 6 (lower is better)
Translates to: WLSTGRWPRHSP*PLSPGRALKYL
Trigger: TAGATATTTGAGTGCACGGCCTGGAGATAGAGGGCAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CCA 72 bp TCGCAGGTCAGGGAAATCAGGACCAGGCGAGGTTCCTaGCGAGCAGTAACCATGTTTCCCTCCTGGTTGATC +
Preference number: 6 (lower is better)
Translates to: SQVREIRTRRGS*RAVTMFPSWLI
Trigger: GATCAACCAGGAGGGAAACATGGTTACTGCTCGCCAGGAACCTCGCCTGGTCCTGATTTCCCTGACCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000492847.1
CDS CAA 72 bp CCTTACAGCCCACCAAGGCACCCTCTCAGTCTCAACTaGCCATTTGGCAGCCCAGGGCTTCCCTTAGTTGCT +
Preference number: 6 (lower is better)
Translates to: PYSPPRHPLSLN*PFGSPGLPLVA
Trigger: AGCAACTAAGGGAAGCCCTGGGCTGCCAAATGGCAAGTTGAGACTGAGAGGGTGCCTTGGTGGGCTGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 90 bp GGCAGGAGGAAGCACAGGGCCTGGCATCTGGTAGGCAACGGGCTCTaGTCAGTGGAAATAGCAGGACTGTTGCTTATATTGTTCACAGGG +
Preference number: 6 (lower is better)
Translates to: GRRKHRAWHLVGNGL*SVEIAGLLLILFTG
Trigger: CCCTGTGAACAATATAAGCAACAGTCCTGCTATTTCCACTGACAAGAGCCCGTTGCCTACCAGATGCCAGGCCCTGTGCTTCCTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS TCA 72 bp ATTACTGGCCCAGCAGGTACACAGGGTCTCCCACTTTaGTGGTCCCTGGGTTTTCCAGCACAAAATACTGCC +
Preference number: 6 (lower is better)
Translates to: ITGPAGTQGLPL*WSLGFPAQNTA
Trigger: GGCAGTATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGTGTACCTGCTGGGCCAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS CAA 72 bp AGCAATCTGGTCCTTGGGTCGGAACAAGTCTGCTATTaGATGAGGACGTCTCGGTCGCATGTGAGGCTCGAA +
Preference number: 6 (lower is better)
Translates to: SNLVLGSEQVCY*MRTSRSHVRLE
Trigger: TTCGAGCCTCACATGCGACCGAGACGTCCTCATCAAATAGCAGACTTGTTCCGACCCAAGGACCAGATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS CAA 72 bp CATTACTGGCCCAGCAGGTACACAGGGTCTCCCACTTaGATGGTCCCTGGGTTTTCCAGCACAAAATACTGC +
Preference number: 6 (lower is better)
Translates to: HYWPSRYTGSPT*MVPGFSSTKYC
Trigger: GCAGTATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGTGTACCTGCTGGGCCAGTAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS CAA 90 bp TACGGTTCCCATTACTGGCCCAGCAGGTACACAGGGTCTCCCACTTaGATGGTCCCTGGGTTTTCCAGCACAAAATACTGCCCAAAGAGT +
Preference number: 6 (lower is better)
Translates to: YGSHYWPSRYTGSPT*MVPGFSSTKYCPKS
Trigger: ACTCTTTGGGCAGTATTTTGTGCTGGAAAACCCAGGGACCATCAAAGTGGGAGACCCTGTGTACCTGCTGGGCCAGTAATGGGAACCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000496110.1
CDS CAA 90 bp CAGTCAAACCCTTACAGCCCACCAAGGCACCCTCTCAGTCTCAACTaGCCATTTGGCAGCCCAGGGCTTCCCTTAGTTGCTTTTATAGGA +
Preference number: 6 (lower is better)
Translates to: QSNPYSPPRHPLSLN*PFGSPGLPLVAFIG
Trigger: TCCTATAAAAGCAACTAAGGGAAGCCCTGGGCTGCCAAATGGCAAGTTGAGACTGAGAGGGTGCCTTGGTGGGCTGTAAGGGTTTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 90 bp TTGGGCCTGAAGTTGGTTGCTTTAACTTTCTTCTCTAGCCTGGAGTaGAGATCCGCCAGCGACGCCTCAGAAAGGATCAAGAATGGGCTG +
Preference number: 6 (lower is better)
Translates to: LGLKLVALTFFSSLE*RSASDASERIKNGL
Trigger: CAGCCCATTCTTGATCCTTTCTGAGGCGTCGCTGGCGGATCTCAACTCCAGGCTAGAGAAGAAAGTTAAAGCAACCAACTTCAGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366910.10
ENST00000407981.6
ENST00000443880.1
ENST00000463976.1
ENST00000472269.1
ENST00000496110.1
CDS CAA 90 bp GGCAACGGGCTCTTGTCAGTGGAAATAGCAGGACTGTTGCTTATATaGTTCACAGGGCATGGAGTTCAGCTGAGCAACACACAGTGCCAC +
Preference number: 6 (lower is better)
Translates to: GNGLLSVEIAGLLLI*FTGHGVQLSNTQCH
Trigger: GTGGCACTGTGTGTTGCTCAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACAGTCCTGCTATTTCCACTGACAAGAGCCCGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS CAA 72 bp AAGCACAGGGCCTGGCATCTGGTAGGCAACGGGCTCTaGTCAGTGGAAATAGCAGGACTGTTGCTTATATTG +
Preference number: 6 (lower is better)
Translates to: KHRAWHLVGNGL*SVEIAGLLLIL
Trigger: CAATATAAGCAACAGTCCTGCTATTTCCACTGACAAGAGCCCGTTGCCTACCAGATGCCAGGCCCTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS CCA 72 bp CCGCCAGCGACGCCTCAGAAAGGATCAAGAATGGGCTaGTGTCTGAGTAAGCAATCTGATAAGGAAATAGAC +
Preference number: 6 (lower is better)
Translates to: PPATPQKGSRMG*CLSKQSDKEID
Trigger: GTCTATTTCCTTATCAGATTGCTTACTCAGACACCAGCCCATTCTTGATCCTTTCTGAGGCGTCGCTGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472269.1
CDS CAA 72 bp GGCAACGGGCTCTTGTCAGTGGAAATAGCAGGACTGTaGCTTATATTGTTCACAGGGCATGGAGTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GNGLLSVEIAGL*LILFTGHGVQL
Trigger: CAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACAGTCCTGCTATTTCCACTGACAAGAGCCCGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS CAA 90 bp CATCTGGTAGGCAACGGGCTCTTGTCAGTGGAAATAGCAGGACTGTaGCTTATATTGTTCACAGGGCATGGAGTTCAGCTGAGCAACACA +
Preference number: 6 (lower is better)
Translates to: HLVGNGLLSVEIAGL*LILFTGHGVQLSNT
Trigger: TGTGTTGCTCAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACAGTCCTGCTATTTCCACTGACAAGAGCCCGTTGCCTACCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS CAA 90 bp CTATCTCCAGGCCGTGCACTCAAATATCTAGGTATGGAGACAGCCTaGAAGGTCATCTCCTTGTTAGATGTCTCTTTGCTGGTGCCTATG +
Preference number: 6 (lower is better)
Translates to: LSPGRALKYLGMETA*KVISLLDVSLLVPM
Trigger: CATAGGCACCAGCAAAGAGACATCTAACAAGGAGATGACCTTCAAGGCTGTCTCCATACCTAGATATTTGAGTGCACGGCCTGGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 72 bp GGCCGTGCACTCAAATATCTAGGTATGGAGACAGCCTaGAAGGTCATCTCCTTGTTAGATGTCTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: GRALKYLGMETA*KVISLLDVSLL
Trigger: CAGCAAAGAGACATCTAACAAGGAGATGACCTTCAAGGCTGTCTCCATACCTAGATATTTGAGTGCACGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS TCA 72 bp TGTTGCTTATATTGTTCACAGGGCATGGAGTTCAGCTaGGCAACACACAGTGCCACTTATACTCTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: CCLYCSQGMEFS*ATHSATYTLPV
Trigger: AACTGGCAGAGTATAAGTGGCACTGTGTGTTGCTCAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS CCA 72 bp AATAGCAGGACTGTTGCTTATATTGTTCACAGGGCATaGAGTTCAGCTGAGCAACACACAGTGCCACTTATA +
Preference number: 6 (lower is better)
Translates to: NSRTVAYIVHRA*SSAEQHTVPLI
Trigger: TATAAGTGGCACTGTGTGTTGCTCAGCTGAACTCCATGCCCTGTGAACAATATAAGCAACAGTCCTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492847.1
CDS TCA 72 bp CTCATCCCAAGAATCCTCTGCATAGACATCGCATCCTaGAATTACAATATTGGGCCTGAAGTTGGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LIPRILCIDIAS*NYNIGPEVGCF
Trigger: AAAGCAACCAACTTCAGGCCCAATATTGTAATTTCAGGATGCGATGTCTATGCAGAGGATTCTTGGGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366910.10
ENST00000443880.1
ENST00000496110.1
CDS CAA 72 bp TATCTAGGTATGGAGACAGCCTTGAAGGTCATCTCCTaGTTAGATGTCTCTTTGCTGGTGCCTATGAGAAAA +
Preference number: 6 (lower is better)
Translates to: YLGMETALKVIS*LDVSLLVPMRK
Trigger: TTTTCTCATAGGCACCAGCAAAGAGACATCTAACAAGGAGATGACCTTCAAGGCTGTCTCCATACCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 90 bp TCGAAGAGTCTGTATACTACCGTAGCATGTCTAAGCCTTTTCATTTaGCAATTTGCAAGCATGCCCTTGTTTAGTCTTTTGGGCATGGAC +
Preference number: 6 (lower is better)
Translates to: SKSLYTTVACLSLFI*QFASMPLFSLLGMD
Trigger: GTCCATGCCCAAAAGACTAAACAAGGGCATGCTTGCAAATTGCAAAATGAAAAGGCTTAGACATGCTACGGTAGTATACAGACTCTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 90 bp GAGAATAGGTTGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTaGGAATCTTTGCTCGAAGAGTCTGTATACTACCGTAGCATGTCT +
Preference number: 6 (lower is better)
Translates to: ENRLGCQKKPESRRF*ESLLEESVYYRSMS
Trigger: AGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCAACCTATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CCA 72 bp TGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTTaGAATCTTTGCTCGAAGAGTCTGTATACTACCGTA +
Preference number: 6 (lower is better)
Translates to: WAVKRNLNPEDS*NLCSKSLYTTV
Trigger: TACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 72 bp TTGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTaGGAATCTTTGCTCGAAGAGTCTGTATACTACCGT +
Preference number: 6 (lower is better)
Translates to: LGCQKKPESRRF*ESLLEESVYYR
Trigger: ACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 90 bp TTGGGCTGTCAAAAGAAACCTGAATCCAGAAGATTCTTGGAATCTTaGCTCGAAGAGTCTGTATACTACCGTAGCATGTCTAAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: LGCQKKPESRRFLES*LEESVYYRSMSKPF
Trigger: AAAAGGCTTAGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTGACAGCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS GCA 72 bp AAAGCATTTGCATCTATCTTGGGCCATTTAAACATCTaGCCTGCTAATCTGACACTGATTTCCATTGCAACA +
Preference number: 6 (lower is better)
Translates to: KAFASILGHLNI*PANLTLISIAT
Trigger: TGTTGCAATGGAAATCAGTGTCAGATTAGCAGGGCAGATGTTTAAATGGCCCAAGATAGATGCAAATGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 72 bp CAAAAGAAACCTGAATCCAGAAGATTCTTGGAATCTTaGCTCGAAGAGTCTGTATACTACCGTAGCATGTCT +
Preference number: 6 (lower is better)
Translates to: QKKPESRRFLES*LEESVYYRSMS
Trigger: AGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS GCA 72 bp AAAAGAAACCTGAATCCAGAAGATTCTTGGAATCTTTaGTCGAAGAGTCTGTATACTACCGTAGCATGTCTA +
Preference number: 6 (lower is better)
Translates to: KRNLNPEDSWNL*SKSLYTTVACL
Trigger: TAGACATGCTACGGTAGTATACAGACTCTTCGAGCAAAGATTCCAAGAATCTTCTGGATTCAGGTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496110.1
CDS CAA 72 bp CTGTATACTACCGTAGCATGTCTAAGCCTTTTCATTTaGCAATTTGCAAGCATGCCCTTGTTTAGTCTTTTG +
Preference number: 6 (lower is better)
Translates to: LYTTVACLSLFI*QFASMPLFSLL
Trigger: CAAAAGACTAAACAAGGGCATGCTTGCAAATTGCAAAATGAAAAGGCTTAGACATGCTACGGTAGTATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496110.1