RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTAP (Homo sapiens)

Ensembl gene IDs: ENSG00000099810

Ensembl transcript IDs: ENST00000419385.5, ENST00000427788.2, ENST00000460874.6, ENST00000577563.1, ENST00000579422.5, ENST00000580718.1, ENST00000580900.5, ENST00000616982.1, ENST00000644715.2

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGAGGCTCCAGGAGCATCCTGTGGATGCCAGAGCAGGCTCACGTaGCACCTGCAGGGCAGCTGGCTCAGGGCAGGTTGGAGGTCACCT +
Preference number: 1 (lower is better)
Translates to: EEAPGASCGCQSRLT*HLQGSWLRAGWRSP
Trigger: AGGTGACCTCCAACCTGCCCTGAGCCAGCTGCCCTGCAGGTGCCACGTGAGCCTGCTCTGGCATCCACAGGATGCTCCTGGAGCCTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR GCA 90 bp CTCCAGGAGCATCCTGTGGATGCCAGAGCAGGCTCACGTGGCACCTaGAGGGCAGCTGGCTCAGGGCAGGTTGGAGGTCACCTTAGTCAC +
Preference number: 1 (lower is better)
Translates to: LQEHPVDARAGSRGT*RAAGSGQVGGHLSH
Trigger: GTGACTAAGGTGACCTCCAACCTGCCCTGAGCCAGCTGCCCTGCAGGTGCCACGTGAGCCTGCTCTGGCATCCACAGGATGCTCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR GCA 90 bp AGAGTTTCCTTCCTTGAAACAAGCCATGGTAGCTACCTCCAGCCCTaGACAGCAACTCGTGCTAGCGAAGGGGGCAGTGAACAGGGGCCA +
Preference number: 1 (lower is better)
Translates to: RVSFLETSHGSYLQP*TATRASEGGSEQGP
Trigger: TGGCCCCTGTTCACTGCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCTTGTTTCAAGGAAGGAAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 90 bp ATAATTATTTGGAAAATAGGTGTTGGTGGGGCCACAACCATGCCCTaGGGTAGCAGCCAGAGAAGAGGCTCCAGGAGCATCCTGTGGATG +
Preference number: 1 (lower is better)
Translates to: IIIWKIGVGGATTMP*GSSQRRGSRSILWM
Trigger: CATCCACAGGATGCTCCTGGAGCCTCTTCTCTGGCTGCTACCTCAGGGCATGGTTGTGGCCCCACCAACACCTATTTTCCAAATAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 90 bp GTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACATaGGATTTGGGTGGGGACACCGCCAAACCTTATCAAGGAGGGACT +
Preference number: 1 (lower is better)
Translates to: VPPTTCGDYGNYNST*DLGGDTAKPYQGGT
Trigger: AGTCCCTCCTTGATAAGGTTTGGCGGTGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR GCA 90 bp GAGATTTGGGTGGGGACACCGCCAAACCTTATCAAGGAGGGACTCTaGAAATGTGGCAAGAACTCCTCATTTCGTGACTTCCTAACCCAT +
Preference number: 1 (lower is better)
Translates to: EIWVGTPPNLIKEGL*KCGKNSSFRDFLTH
Trigger: ATGGGTTAGGAAGTCACGAAATGAGGAGTTCTTGCCACATTTGCAGAGTCCCTCCTTGATAAGGTTTGGCGGTGTCCCCACCCAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 90 bp TTTGGGAAACTGGATGAAGGTCAGTCTTCTGTAACTGCTTCCTGCTaGCAGAGGTGTGATGGTGATTGTTCTGTGGGTCTTGGCCTCTTG +
Preference number: 1 (lower is better)
Translates to: FGKLDEGQSSVTASC*QRCDGDCSVGLGLL
Trigger: CAAGAGGCCAAGACCCACAGAACAATCACCATCACACCTCTGTCAGCAGGAAGCAGTTACAGAAGACTGACCTTCATCCAGTTTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 90 bp TTTAATTACCTCCCACTGGGTCCCTCCCACAACATGTGGGGATTATaGGAACTACAATTCAACATGAGATTTGGGTGGGGACACCGCCAA +
Preference number: 1 (lower is better)
Translates to: FNYLPLGPSHNMWGL*ELQFNMRFGWGHRQ
Trigger: TTGGCGGTGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGAGGTAATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR GCA 90 bp GGTAGAAAGAAGGATATTGTAAGGACTCAACGGGTTCTTCTTGCCTaGTGCCCAGATAGAGCTGATTTATCATTTATCAAGGCAGGGGAA +
Preference number: 1 (lower is better)
Translates to: GRKKDIVRTQRVLLA*CPDRADLSFIKAGE
Trigger: TTCCCCTGCCTTGATAAATGATAAATCAGCTCTATCTGGGCAGCAGGCAAGAAGAACCCGTTGAGTCCTTACAATATCCTTCTTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 90 bp CTTCTGGGCTCAAGTTATCCTCCTGTTAGCAGCAGCAAATCTGTATaGGTCTGCAGCAGCTTGCTTTTTGCCATCTTGAAGGAAATAATT +
Preference number: 1 (lower is better)
Translates to: LLGSSYPPVSSSKSV*VCSSLLFAILKEII
Trigger: AATTATTTCCTTCAAGATGGCAAAAAGCAAGCTGCTGCAGACCCATACAGATTTGCTGCTGCTAACAGGAGGATAACTTGAGCCCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 90 bp AGAAAGAAGGATATTGTAAGGACTCAACGGGTTCTTCTTGCCTGCTaGCCAGATAGAGCTGATTTATCATTTATCAAGGCAGGGGAATTG +
Preference number: 1 (lower is better)
Translates to: RKKDIVRTQRVLLAC*PDRADLSFIKAGEL
Trigger: CAATTCCCCTGCCTTGATAAATGATAAATCAGCTCTATCTGGGCAGCAGGCAAGAAGAACCCGTTGAGTCCTTACAATATCCTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR TCA 90 bp TGTCTGGATAGATATGTCCAAACAATACAGTGTGGTTCCAGGAGATaGAGACATCAAATAGCATGGCCTCCAATGTGGAATGCCATCAAA +
Preference number: 1 (lower is better)
Translates to: CLDRYVQTIQCGSRR*RHQIAWPPMWNAIK
Trigger: TTTGATGGCATTCCACATTGGAGGCCATGCTATTTGATGTCTTCATCTCCTGGAACCACACTGTATTGTTTGGACATATCTATCCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 90 bp GCATCAATAAATAACCAAAGAGTCCCATTTCTTCCTCACATTCTTTaGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTG +
Preference number: 1 (lower is better)
Translates to: ASINNQRVPFLPHIL*QYRKVEITLHPLLL
Trigger: CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTGAGGAAGAAATGGGACTCTTTGGTTATTTATTGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
3UTR CCA 90 bp GTTGCTAGAGAAGGCTATTTAATCAAGAAAAGTACCTCTGCAAGTTaGAGAGAACTGTACTTTCTGAACATAGCAAGAAAAATGCCCATA +
Preference number: 1 (lower is better)
Translates to: VAREGYLIKKSTSAS*RELYFLNIARKMPI
Trigger: TATGGGCATTTTTCTTGCTATGTTCAGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACTTTTCTTGATTAAATAGCCTTCTCTAGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR GCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCTCTCACTGCAAGCTCTaGTCACTGCAAGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: SHGSYLQPCTATRASEGGSHCKL*SLQAPP
Trigger: AGGTGGAGCTTGCAGTGAGCAGAGCTTGCAGTGAGA...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR TCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGCAAAATGCTCACAACTaGCCATGGTGTTCACTTAGT +
Preference number: 2 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQQNAHN*PWCSLS
Trigger: ACTAAGTGAACACCATGGTCAGTTGTGAGCATTTTG...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR TCA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAGATCTCCTGACCTTGTaGTCCACCCGTCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTDLLTL*STRLGL
Trigger: GAGGCCGAGACGGGTGGATCACAAGGTCAGGAGATC...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGCAAGAAAAGTACCTCTaGAAGTTGGAGAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQQEKYL*KLERTV
Trigger: TACAGTTCTCTCCAACTTGCAGAGGTACTTTTCTTG...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCCAGGCTGGAGAGCAGTaGCATAATCAAGGCTCACCG +
Preference number: 2 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAQAGEQ*HNQGSP
Trigger: CGGTGAGCCTTGATTATGCCACTGCTCTCCAGCCTG...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGAGATGGGGTTTGGCTTaGTCAGATCACCCCTACTGC +
Preference number: 2 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQRWGLA*SDHPYC
Trigger: GCAGTAGGGGTGATCTGATCAAGCCAAACCCCATCT...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCAAAGGTGGTTTCAATTaGGGGAAGAAGCAGTTGGAG +
Preference number: 2 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPKGGFN*GKKQLE
Trigger: CTCCAACTGCTTCTTCCCTCAATTGAAACCACCTTT...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCCAGGCTGTCCACATGTaGATGAGTCATGTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPQAVHM*MSHVFL
Trigger: TAAAAACACATGACTCATGCACATGTGGACAGCCTG...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACACAGGAGTGGTTGGTaGGTCCAGGTGGAGCCATCG +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQHRSGW*VQVEPS
Trigger: CGATGGCTCCACCTGGACCCACCAACCACTCCTGTG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACCCAGGTGCGGAACATaGAGCTTTCTGCCCGGGAGC +
Preference number: 2 (lower is better)
Translates to: ILPNCPPEILYQFTVASIPRCGT*SFLPGS
Trigger: GCTCCCGGGCAGAAAGCTTCATGTTCCGCACCTGGG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR TCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATGTAACTGCTTCCTGCTaGCAGAGGTGTGATGGTGAT +
Preference number: 2 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYVTASC*QRCDGD
Trigger: ATCACCATCACACCTCTGTCAGCAGGAAGCAGTTAC...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGCTTTGGGAAACTGGATaGAGGTCAGTCTTCTGTAAC +
Preference number: 2 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQLWETG*RSVFCN
Trigger: GTTACAGAAGACTGACCTTCATCCAGTTTCCCAAAG...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAGGTAGGAGAATCGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQGRRIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCGATTCTCCTACC...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCATTGTCTTTCCCTGCTaGCAGTTGCAACCTATTATT +
Preference number: 2 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPIVFPC*QLQPII
Trigger: AATAATAGGTTGCAACTGGCAGCAGGGAAAGACAAT...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGGTGGGGCCACAACCATaGCCTGAGGTAGCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: AQINAETYHVHRLKGSILVGPQP*PEVAAR
Trigger: TCTGGCTGCTACCTCAGGGCATGGTTGTGGCCCCAC...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CCA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAAGTACCTCTGCAAGTTaGAGAGAACTGTACTTTCTG +
Preference number: 2 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTSTSAS*RELYFL
Trigger: CAGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACT...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTGAAAATAGGTGTTGGTaGGGCCACAACCATGCCCTG +
Preference number: 2 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLENRCW*GHNHAL
Trigger: CAGGGCATGGTTGTGGCCCCACCAACACCTATTTTC...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR TCA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAAGCAGCTTATTATCTTaGAGTCAATCTCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTSSLLS*SQSQRH
Trigger: GTGTCTCTGAGATTGACTTCAAGATAATAAGCTGCT...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR TCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTGAGAACTCAGTATCATaGGAACAGCAGTGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLENSVS*EQQCGG
Trigger: ACCCCCACACTGCTGTTCTCATGATACTGAGTTCTC...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAATGCTGAGTTGCTTCTaGATGGGGCCACAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQMLSCF*MGPQEW
Trigger: CCACTCCTGTGGCCCCATCCAGAAGCAACTCAGCAT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CAA 90 bp TATCCTCCTGTTAGCAGCAGCAAATCTGTATGGGTCTGCAGCAGCTaGCTTTTTGCCATCTTGAAGGAAATAATTCTTCCAAGGGGCATA +
Preference number: 2 (lower is better)
Translates to: YPPVSSSKSVWVCSS*LFAILKEIILPRGI
Trigger: TATGCCCCTTGGAAGAATTATTTCCTTCAAGATGGCAAAAAGCAAGCTGCTGCAGACCCATACAGATTTGCTGCTGCTAACAGGAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATAGTGTGCTGCCTTCCATaGCTTGCAAGGAGGACGCAA +
Preference number: 2 (lower is better)
Translates to: PSTVLTVQKSMILFFSRIVCCLP*LARRTQ
Trigger: TTGCGTCCTCCTTGCAAGGCATGGAAGGCAGCACAC...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGAATTCTTTGGGAAACTaGATGAAGGTCAGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQNSLGN*MKVSLL
Trigger: CAGAAGACTGACCTTCATCCAGTTTCCCAAAGAATT...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCCTGACATTCCTAGTTaGAGGGGGTCTCTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISPDIPS*RGSLLP
Trigger: AGGGAGGAGAGACCCCCTCCAACTAGGAATGTCAGG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTTTAATTACCTCCCACTaGGTCCCTCCCACAACATGT +
Preference number: 2 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLLITSH*VPPTTC
Trigger: ACATGTTGTGGGAGGGACCCAGTGGGAGGTAATTAA...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR GCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCTGCCTTCCATGCCTTaGAAGGAGGACGCAATCAAC +
Preference number: 2 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSLPSMP*KEDAIN
Trigger: GTTGATTGCGTCCTCCTTGCAAGGCATGGAAGGCAG...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGCTCCTCTATCCTCCTTaGCTGGTGGCCTCTCATCAG +
Preference number: 2 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWLLYPP*LVASHQ
Trigger: CTGATGAGAGGCCACCAGGCAAGGAGGATAGAGGAG...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAAACGGCTCAGCCATTaGAATATGGCACACTCCTCT +
Preference number: 2 (lower is better)
Translates to: HILWQYRKVEITLHPLLLKRLSH*NMAHSS
Trigger: AGAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR CCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGGAACCTCTCTCGTTTTaGGGCAAAACGGCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSEPLSF*GKTAQP
Trigger: TGGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTC...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR CAA 90 bp ATGAAAGGAAATAAAGTACACTTAGAAGAGGGCCAAGTGGGCAACTaGAGAAATCCAAGTGCCCTGTTTGACCTTAGACTTGGGGTTTTA +
Preference number: 2 (lower is better)
Translates to: MKGNKVHLEEGQVGN*RNPSALFDLRLGVL
Trigger: TAAAACCCCAAGTCTAAGGTCAAACAGGGCACTTGGATTTCTCAAGTTGCCCACTTGGCCCTCTTCTAAGTGTACTTTATTTCCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACCCCGCAAAAATCCATaGCCCAATTCTTTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQPRKNP*PNSLGN
Trigger: GTTTCCCAAAGAATTGGGTCATGGATTTTTGCGGGG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTGCAGCCTTAACCTTCTaGGCTCAAGTTATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISAALTF*AQVILL
Trigger: CAGGAGGATAACTTGAGCCCAGAAGGTTAAGGCTGC...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATATCTGTGGACCCTATCTaGGGTATGGTAGTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: ILPNCPPEILYQFTVASISVDPI*GMVVSS
Trigger: ACTGCTCACTACCATACCTCAGATAGGGTCCACAGA...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR TCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTAACAAACAGGACTTGTaGGAACTCAGTATCATGAGA +
Preference number: 2 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLNKQDL*ELSIMR
Trigger: TCTCATGATACTGAGTTCTCACAAGTCCTGTTTGTT...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CAA 90 bp CAGGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTaGCAACCTATTATTATTTTAGAGAGAGAGTTTAACAACCACCTG +
Preference number: 2 (lower is better)
Translates to: QDFSIYWEIVFPCCQ*QPIIILEREFNNHL
Trigger: CAGGTGGTTGTTAAACTCTCTCTCTAAAATAATAATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTGCTTGCCCAAATCCTaGGATCTTACTAGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWCLPKS*DLTRKL
Trigger: CAGCTTCCTAGTAAGATCTCAGGATTTGGGCAAGCA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAATGTTTGAGCCTGCTTaGCCAAATCCTGAGATCTTA +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQMFEPA*PNPEIL
Trigger: TAAGATCTCAGGATTTGGGCAAGCAGGCTCAAACAT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGATTAGTCCATTCTCATaGTGCTGTAAAGGACTGCCC +
Preference number: 2 (lower is better)
Translates to: AQINAETYHVHRLKGSILISPFS*CCKGLP
Trigger: GGGCAGTCCTTTACAGCAGCATGAGAATGGACTAAT...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAAGGCTGCCTGATTTGTaGATCATTCATTGCTCAATT +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQRLPDL*IIHCSI
Trigger: AATTGAGCAATGAATGATTCACAAATCAGGCAGCCT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp TACAGCATCACAAGTGAGAAGTGTTCCAGGAAGTGTTCTTCAACAATATCCTCATCCACCCTTTATTGTTaGAAATTTAATAGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: YSITSEKCSRKCSSTISSSTLYC*KFNRGR
Trigger: TCTCCCCCTATTAAATTTGCAACAATAAAGGGTGGA...TGAGGATATTGTTGAAGAACACTTCCTGGAACACTTCTCACTTGTGATGCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATACCTACACTCAGTGTaGATAGCTTCAGCAAATTTC +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQYLHSV*IASANF
Trigger: GAAATTTGCTGAAGCTATCCACACTGAGTGTAGGTA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAAAACTCCTTCTCCATTaGTTAAGAGTGTCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQKLLLH*LRVSGD
Trigger: ATCACCAGACACTCTTAACCAATGGAGAAGGAGTTT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CAA 90 bp GATGTAGAGTTCCCAGCACAAAGTACGTCCGTATTTTTAAGTCTTTaGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATT +
Preference number: 2 (lower is better)
Translates to: DVEFPAQSTSVFLSL*MHFTKLPSRNTVPI
Trigger: AATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAAAGACTTAAAAATACGGACGTACTTTGTGCTGGGAACTCTACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
3UTR-3UTR TCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGCCAGCTGGTTTATTCTaGGGGACTAATTTCATAAGG +
Preference number: 2 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWPAGLF*GTNFIR
Trigger: CCTTATGAAATTAGTCCCTCAGAATAAACCAGCTGG...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTTCAGCTTTGCTGAGGTaGTTGAATTTTAAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISSALLR*LNFKEG
Trigger: TCCTTCCTTAAAATTCAACCACCTCAGCAAAGCTGA...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR TCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGCTGTACAGAAATCAATaGTCCTCTTCTTTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: AQINAETYHVHRLKGSILLYRNQ*SSSLAE
Trigger: TTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAG...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTCAGATCACCCCTACTaGCATAATTTTCTCACTGTT +
Preference number: 2 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWSDHPY*HNFLTV
Trigger: AACAGTGAGAAAATTATGGCAGTAGGGGTGATCTGA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACTCCAGAATAATGGCTaGAAACTGTTTATATCTACA +
Preference number: 2 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQLQNNG*KLFIST
Trigger: TGTAGATATAAACAGTTTCCAGCCATTATTCTGGAG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTCAAGGCAGGGGAATTaGAATAGAGAAAGAGTTTTA +
Preference number: 2 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWSRQGN*NRERVL
Trigger: TAAAACTCTTTCTCTATTGCAATTCCCCTGCCTTGA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp CATCCTGTGGATGCCAGAGCAGGCTCACGTGGCACCTaGAGGGCAGCTGGCTCAGGGCAGGTTGGAGGTCAC +
Preference number: 3 (lower is better)
Translates to: HPVDARAGSRGT*RAAGSGQVGGH
Trigger: GTGACCTCCAACCTGCCCTGAGCCAGCTGCCCTGCAGGTGCCACGTGAGCCTGCTCTGGCATCCACAGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp GGTAGCAGCCAGAGAAGAGGCTCCAGGAGCATCCTGTaGATGCCAGAGCAGGCTCACGTGGCACCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GSSQRRGSRSIL*MPEQAHVAPAG
Trigger: CCCTGCAGGTGCCACGTGAGCCTGCTCTGGCATCCACAGGATGCTCCTGGAGCCTCTTCTCTGGCTGCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp TGCATGCTGAGTTGCTTCTGGATGGGGCCACAGGAGTaGTTGGTGGGTCCAGGTGGAGCCATCGGTAGTCAG +
Preference number: 3 (lower is better)
Translates to: CMLSCFWMGPQE*LVGPGGAIGSQ
Trigger: CTGACTACCGATGGCTCCACCTGGACCCACCAACCACTCCTGTGGCCCCATCCAGAAGCAACTCAGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCGGTTTTAAAGAGAAATaGCTAGATGTAGAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: SHGSYLQPCTATRASEGGGFKEK*LDVEFP
Trigger: TGGGAACTCTACATCTAGCAATTTCTCTTTAAAACC...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 72 bp TGTCACATCCTGCCCCAAATCCATGCCCAGGGGATGTaGCCCTCACCCATTATGTTCATGCTCCTGGAATTT +
Preference number: 3 (lower is better)
Translates to: CHILPQIHAQGM*PSPIMFMLLEF
Trigger: AAATTCCAGGAGCATGAACATAATGGGTGAGGGTCACATCCCCTGGGCATGGATTTGGGGCAGGATGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp GTGGGGACACCGCCAAACCTTATCAAGGAGGGACTCTaGAAATGTGGCAAGAACTCCTCATTTCGTGACTTC +
Preference number: 3 (lower is better)
Translates to: VGTPPNLIKEGL*KCGKNSSFRDF
Trigger: GAAGTCACGAAATGAGGAGTTCTTGCCACATTTGCAGAGTCCCTCCTTGATAAGGTTTGGCGGTGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp CTCCCACTGGGTCCCTCCCACAACATGTGGGGATTATaGGAACTACAATTCAACATGAGATTTGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LPLGPSHNMWGL*ELQFNMRFGWG
Trigger: TCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 72 bp ATTTGTTCTGACCATGAGGCATCCCTGGAGTCTCCATaGATCAGCTGTAACTCTGGAGGCTGCCTGATTTGT +
Preference number: 3 (lower is better)
Translates to: ICSDHEASLESP*ISCNSGGCLIC
Trigger: ACAAATCAGGCAGCCTCCAGAGTTACAGCTGATTCATGGAGACTCCAGGGATGCCTCATGGTCAGAACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 72 bp CACATAGCTGGGAAGGCCTCAGGAAACTTACAATCGTaGCAGAAGGGGAAACAAACACGTCCTTCTTCACAT +
Preference number: 3 (lower is better)
Translates to: HIAGKASGNLQS*QKGKQTRPSSH
Trigger: ATGTGAAGAAGGACGTGTTTGTTTCCCCTTCTGCCACGATTGTAAGTTTCCTGAGGCCTTCCCAGCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAGAACCTCTCTCGTTTaGGGGCAAAACGGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: HILWQYRKVEITLHPLLLRTSLV*GQNGSA
Trigger: GGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTCT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGCATGCTTCTGGGGTTTaGCATCTCTCCTCTTTTGAT +
Preference number: 3 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQHASGV*HLSSFD
Trigger: ATCAAAAGAGGAGAGATGCAAAACCCCAGAAGCATG...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTTTCCCTGCTGCCAGTaGCAACCTATTATTATTTTA +
Preference number: 3 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPFPCCQ*QPIIIL
Trigger: TAAAATAATAATAGGTTGCAACTGGCAGCAGGGAAA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTGTTTGACCTTAGACTaGGGGTTTTATATATTGGCA +
Preference number: 3 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPCLTLD*GFYILA
Trigger: TGCCAATATATAAAACCCCAAGTCTAAGGTCAAACA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACACCAGAGTTTCCTTCCTaGAAACAAGCCATGGTAGCT +
Preference number: 3 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTPEFPS*KQAMVA
Trigger: AGCTACCATGGCTTGTTTCAAGGAAGGAAACTCTGG...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp TCAAGTTATCCTCCTGTTAGCAGCAGCAAATCTGTATaGGTCTGCAGCAGCTTGCTTTTTGCCATCTTGAAG +
Preference number: 3 (lower is better)
Translates to: SSYPPVSSSKSV*VCSSLLFAILK
Trigger: CTTCAAGATGGCAAAAAGCAAGCTGCTGCAGACCCATACAGATTTGCTGCTGCTAACAGGAGGATAACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp TATCCTCCTGTTAGCAGCAGCAAATCTGTATGGGTCTaGAGCAGCTTGCTTTTTGCCATCTTGAAGGAAATA +
Preference number: 3 (lower is better)
Translates to: YPPVSSSKSVWV*SSLLFAILKEI
Trigger: TATTTCCTTCAAGATGGCAAAAAGCAAGCTGCTGCAGACCCATACAGATTTGCTGCTGCTAACAGGAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp CTTGCTGGGCCAATATATACATTGAGCCAGATTGTGTaGACACTGGTAGTTCCAAGGTGCAACAATCTTCAA +
Preference number: 3 (lower is better)
Translates to: LAGPIYTLSQIV*TLVVPRCNNLQ
Trigger: TTGAAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATATATTGGCCCAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp TTTGTCTATAAATTTGTTCTGACCATGAGGCATCCCTaGAGTCTCCATGAATCAGCTGTAACTCTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: FVYKFVLTMRHP*SLHESAVTLEA
Trigger: AGCCTCCAGAGTTACAGCTGATTCATGGAGACTCCAGGGATGCCTCATGGTCAGAACAAATTTATAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp ATGAAGACATCAAATAGCATGGCCTCCAATGTGGAATaGCATCAAATACAAAACTCCCTCCAAACACCTTGG +
Preference number: 3 (lower is better)
Translates to: MKTSNSMASNVE*HQIQNSLQTPW
Trigger: CCAAGGTGTTTGGAGGGAGTTTTGTATTTGATGGCATTCCACATTGGAGGCCATGCTATTTGATGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 72 bp TTTAATTACCTCCCACTGGGTCCCTCCCACAACATGTaGGGATTATGGGAACTACAATTCAACATGAGATTT +
Preference number: 3 (lower is better)
Translates to: FNYLPLGPSHNM*GLWELQFNMRF
Trigger: AAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGAGGTAATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGAAAACGGCTCAGCCATaGGAATATGGCACACTCCTC +
Preference number: 3 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSKTAQP*EYGTLL
Trigger: GAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTTT...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419385.5
3UTR-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATGCATCTCTCCTCTTTaGATTTTTCCTTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQCISPL*IFPWGR
Trigger: CCTGCCCCAAGGAAAAATCAAAAGAGGAGAGATGCA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCAAAAGGTTCTGTATCTaGATCCTGAAGTATCCTGTA +
Preference number: 3 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCKRFCI*ILKYPV
Trigger: TACAGGATACTTCAGGATCAAGATACAGAACCTTTT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCTGGAGGGTAACTGTTTaGTTTACAATTAGCAGCTTA +
Preference number: 3 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCWRVTV*FTISSL
Trigger: TAAGCTGCTAATTGTAAACAAAACAGTTACCCTCCA...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTAAGTACCTCTGCAAGTaGGAGAGAACTGTACTTTCT +
Preference number: 3 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLKYLCK*ERTVLS
Trigger: AGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACTT...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CCA 72 bp AATAACCAAAGAGTCCCATTTCTTCCTCACATTCTTTaGCAGTATAGGAAAGTAGAGATTACCCTCCACCCT +
Preference number: 3 (lower is better)
Translates to: NNQRVPFLPHIL*QYRKVEITLHP
Trigger: AGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTGAGGAAGAAATGGGACTCTTTGGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
3UTR-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACCAATCAACTTGGCCTaGAGACTTCACTGCATTCTT +
Preference number: 3 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQPINLA*RLHCIL
Trigger: AAGAATGCAGTGAAGTCTCAAGGCCAAGTTGATTGG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTTTTCTCAGAAAGCTGTaGCAAACCCAAGTACTGTTC +
Preference number: 3 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSFLRKL*QTQVLF
Trigger: GAACAGTACTTGGGTTTGCAACAGCTTTCTGAGAAA...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCAAAGGTGGTTTCAATaGAGGGAAGAAGCAGTTGGA +
Preference number: 3 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISQRWFQ*REEAVG
Trigger: TCCAACTGCTTCTTCCCTCAATTGAAACCACCTTTG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTGCTTTGCTGAGGTGGTaGAATTTTAAGGAAGGACTA +
Preference number: 3 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISALLRW*NFKEGL
Trigger: TAGTCCTTCCTTAAAATTCAACCACCTCAGCAAAGC...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp GACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTaGCAGTTGCAACCTATTATTATTTTAGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: DFSIYWEIVFPC*QLQPIIILERE
Trigger: CTCTCTCTCTAAAATAATAATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR GCA 72 bp CAGGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTaGTGCCAGTTGCAACCTATTATTATTTTAGAGAGA +
Preference number: 3 (lower is better)
Translates to: QDFSIYWEIVFP*CQLQPIIILER
Trigger: TCTCTCTAAAATAATAATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGCTTACAACATACTCTTaGATAGGCAAGGGCATGAAA +
Preference number: 3 (lower is better)
Translates to: AQINAETYHVHRLKGSILLTTYS*IGKGMK
Trigger: TTTCATGCCCTTGCCTATCAAAGAGTATGTTGTAAG...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAATTTCTGAATCCAAATaGTGTTTCTGGCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQISESK*CFWQME
Trigger: TTCCATCTGCCAGAAACACAATTTGGATTCAGAAAT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATTTCACAGTTTTCATTaGAAAACTGTAGCCATGTGC +
Preference number: 3 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQFHSFH*KTVAMC
Trigger: GCACATGGCTACAGTTTTCAAATGAAAACTGTGAAA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATCTATATTTGAGTCCTaGTGGATGAACTGTAACCTA +
Preference number: 3 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQSIFES*WMNCNL
Trigger: TAGGTTACAGTTCATCCACAAGGACTCAAATATAGA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR TCA 72 bp TACTACATCAGGAAGTCCAAGGGTCATAATCATACTTaGCCCAAATGGCTCACACTAATGAGTCATATTAAT +
Preference number: 3 (lower is better)
Translates to: YYIRKSKGHNHT*PKWLTLMSHIN
Trigger: ATTAATATGACTCATTAGTGTGAGCCATTTGGGTCAAGTATGATTATGACCCTTGGACTTCCTGATGTAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTTTATACATGTAGAGTaGGCTAAATGGGAGACGTAT +
Preference number: 3 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWFIHVE*AKWETY
Trigger: ATACGTCTCCCATTTAGCCAACTCTACATGTATAAA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CCA 72 bp GAAGGCTATTTAATCAAGAAAAGTACCTCTGCAAGTTaGAGAGAACTGTACTTTCTGAACATAGCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: EGYLIKKSTSAS*RELYFLNIARK
Trigger: TTTTCTTGCTATGTTCAGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACTTTTCTTGATTAAATAGCCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR TCA 72 bp GAAGTGTTCTTCAACAATATCCTCAAGCATAAGGTATaGGGAAAATTATATTGGCTTTGCATAAGGAGTGAA +
Preference number: 3 (lower is better)
Translates to: EVFFNNILKHKV*GKLYWLCIRSE
Trigger: TTCACTCCTTATGCAAAGCCAATATAATTTTCCTCATACCTTATGCTTGAGGATATTGTTGAAGAACACTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCAGGTCACAAGGACCATaGCCCTCGGGGACCACAGGG +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGRSQGP*PSGTTG
Trigger: CCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGACTGTCCTCCACTCCTaGGGGTGCCACCGTACCAGA +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQTVLHS*GCHRTR
Trigger: TCTGGTACGGTGGCACCCTCAGGAGTGGAGGACAGT...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCTCTTCACGGCGGTGGTaGTGGTGCCAGAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGSSRRW*WCQRPC
Trigger: ACATGGCCTCTGGCACCACCACCACCGCCGTGAAGA...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCCCGGTCCACCGAAACTaGTTCCTCGTGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGPVHRN*FLVLLP
Trigger: TGGAAGGAGCACGAGGAAGCAGTTTCGGTGGACCGG...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCATGGTCTCGATCTCCTaGCCTTGTGATCCACCCGTC +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGMVSIS*PCDPPV
Trigger: GACGGGTGGATCACAAGGTCAGGAGATCGAGACCAT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CAA 72 bp ATGCTGAGTTGCTTCTGGATGGGGCCACAGGAGTGGTaGGTGGGTCCAGGTGGAGCCATCGGTAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: MLSCFWMGPQEW*VGPGGAIGSQT
Trigger: TGTCTGACTACCGATGGCTCCACCTGGACCCACCAACCACTCCTGTGGCCCCATCCAGAAGCAACTCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCCCCAGGTGCGGAACATaGAGCTTTCTGCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAPRCGT*SFLPGS
Trigger: GCTCCCGGGCAGAAAGCTTCATGTTCCGCACCTGGG...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGAACTACAATTCAACATaGGATTTGGGTGGGGACACC +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQNYNST*DLGGDT
Trigger: GGTGTCCCCACCCAAATCTCATGTTGAATTGTAGTT...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGTTGCGGAAACCAAAATaGTCACAACTGACCATGGTG +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQLRKPK*SQLTMV
Trigger: CACCATGGTCAGTTGTGAGCATTTTGGTTTCCGCAA...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGTCACCATCCATCCTTTaGGGAAACCAAAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQSPSIL*GNQNAH
Trigger: GTGAGCATTTTGGTTTCCGCAAAGGATGGATGGTGA...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCAACATGAGATTTGGGTaGGGACACCGCCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGNMRFG*GHRQTL
Trigger: TAAGGTTTGGCGGTGTCCCCACCCAAATCTCATGTT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCTCTTCACGGCGGTGGTaGTGGTGCCAGAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGASSRRW*WCQRPC
Trigger: ACATGGCCTCTGGCACCACCACCACCGCCGTGAAGA...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCCACAGGAGTGGTTGGTaGGTCCAGGTGGAGCCATCG +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAHRSGW*VQVEPS
Trigger: CGATGGCTCCACCTGGACCCACCAACCACTCCTGTG...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTCAGGGCAGGGTGGCTaGATGGGTTGTTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPSGQGG*MGCWKQ
Trigger: CTGCTTCCAACAACCCATGCAGCCACCCTGCCCTGA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGATGGTCTTCATTTACTaGTGTCCTTCTTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQMVFIY*CPSCLS
Trigger: AGATAGGCAAGAAGGACAGCAGTAAATGAAGACCAT...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGGGCCACAGGAGTGGTTaGTGGGTCCAGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQGHRSG*WVQVEP
Trigger: TGGCTCCACCTGGACCCACCAACCACTCCTGTGGCC...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCCCCAGGTGCGGAACATaGAGCTTTCTGCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCPRCGT*SFLPGS
Trigger: GCTCCCGGGCAGAAAGCTTCATGTTCCGCACCTGGG...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCCTCCTCTATCCTCCTTaGCTGGTGGCCTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPLLYPP*LVASHQ
Trigger: CTGATGAGAGGCCACCAGGCAAGGAGGATAGAGGAG...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGCTGGTAGTTCCAAGGTaGAACAATCTTCAAAACATT +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQLVVPR*NNLQNI
Trigger: AATGTTTTGAAGATTGTTGCACCTTGGAACTACCAG...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp AGTGAACAGGGGCCAGGTCACAAGGACCATGACCCTCGGGGACCACAGGGCCAGTTCAGTTCTTTGCCTTaGTGGGCCAATATATACATT +
Preference number: 4 (lower is better)
Translates to: SEQGPGHKDHDPRGPQGQFSSLP*WANIYI
Trigger: AATGTATATATTGGCCCAGCAAGGCAAAGAACTGAA...CTGGCCCTGTGGTCCCCGAGGGTCATGGTCCTTGTGACCTGGCCCCTGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCGGCTGCATGGGTTGTTaGAAGCAGTATCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPGCMGC*KQYPAR
Trigger: CCTGGCTGGATACTGCTTCCAACAACCCATGCAGCC...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCAGGACTGCCCATGACTaGGTAATTTATAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGRTAHD*VIYKGK
Trigger: CTTTCCTTTATAAATTACCCAGTCATGGGCAGTCCT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCATGGTCTTGATCTCTTaGCCTCATGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAMVLIS*PHDLPA
Trigger: GGCGGGCAGATCATGAGGTCAAGAGATCAAGACCAT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCCTGCCTTCCATGCCTTaGAAGGAGGACGCAATCAAC +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPLPSMP*KEDAIN
Trigger: GTTGATTGCGTCCTCCTTGCAAGGCATGGAAGGCAG...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGGGCTCACGTGGCACCTaGAGGGCAGCTGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLGSRGT*RAAGSG
Trigger: CCCTGAGCCAGCTGCCCTGCAGGTGCCACGTGAGCC...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCGCAGCTCTGCCTGAGTaGACAAACTCATCACTGGAG +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPAALPE*TNSSLE
Trigger: CTCCAGTGATGAGTTTGTCCACTCAGGCAGAGCTGC...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCAACATGTGGGGATTATaGGAACTACAATTCAACATG +
Preference number: 4 (lower is better)
Translates to: SHGSYLQPCTATRASEGGNMWGL*ELQFNM
Trigger: CATGTTGAATTGTAGTTCCCATAATCCCCACATGTT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTACAGAGCGGTGGCTGTaGCAACCTCACTGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLTERWL*QPHCAG
Trigger: TCCCGCGCAGTGAGGTTGGCACAGCCACCGCTCTGT...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCTTATGCATGCTGAGTTaGTTCTGGATGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGALCMLS*FWMGPQ
Trigger: CTGTGGCCCCATCCAGAAGCAACTCAGCATGCATAA...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACAGTGGGGCCACAACCATaGCCTGAGGTAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTVGPQP*PEVAAR
Trigger: TCTGGCTGCTACCTCAGGGCATGGTTGTGGCCCCAC...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGCAGGCTGGAGAGCAGTaGCATAATCAAGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQQAGEQ*HNQGSP
Trigger: CGGTGAGCCTTGATTATGCCACTGCTCTCCAGCCTG...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAGAAAATAGGTGTTGGTaGGGCCACAACCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTENRCW*GHNHAL
Trigger: CAGGGCATGGTTGTGGCCCCACCAACACCTATTTTC...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAGAGAACTCAGTATCATaGGAACAGCAGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTENSVS*EQQCGG
Trigger: ACCCCCACACTGCTGTTCTCATGATACTGAGTTCTC...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGTTCATGCGATTCTCCTaGCTCAGCCTCCCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQFMRFS*LSLPSS
Trigger: GCTACTAGGGAGGCTGAGGCAGGAGAATCGCATGAA...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCTGTGCCAACCTCACTaGGCGGGAGTGAGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLLCQPH*AGVSSA
Trigger: CGCACTGCTCACTCCCGCGCAGTGAGGTTGGCACAG...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAACCCAGGTGCGGAACATaGAGCTTTCTGCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQPRCGT*SFLPGS
Trigger: GCTCCCGGGCAGAAAGCTTCATGTTCCGCACCTGGG...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR TCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGTCCCTGGAGTCTCCATaGATCAGCTGTAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQSLESP*ISCNSG
Trigger: TCCAGAGTTACAGCTGATTCATGGAGACTCCAGGGA...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTCCTTTGTAAGCAGATaGCCTGAAATACCATTGCCC +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPSFVSR*PEIPLP
Trigger: GGGCAATGGTATTTCAGGTCATCTGCTTACAAAGGA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp TACAGCATCACAAGTGAGAAGTGTTCCAGGAAGTGTTCTTCAACAATATCCTCAGATCTCCTGACCTTGTaGTCCACCCGTCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: YSITSEKCSRKCSSTISSDLLTL*STRLGL
Trigger: GAGGCCGAGACGGGTGGATCACAAGGTCAGGAGATC...TGAGGATATTGTTGAAGAACACTTCCTGGAACACTTCTCACTTGTGATGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCAGGCATCAGATGGCTTaGCAAATGGAGTATCCACAT +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGARHQMA*QMEYPH
Trigger: ATGTGGATACTCCATTTGGCAAGCCATCTGATGCCT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGTCTTCACGGCGGTGGTaGTGGTGCCAGAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLSSRRW*WCQRPC
Trigger: ACATGGCCTCTGGCACCACCACCACCGCCGTGAAGA...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGTTGTTCTGTGGGTCTTaGCCTCTTGCTAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQLFCGS*PLASCQ
Trigger: CTGACAGCTAGCAAGAGGCCAAGACCCACAGAACAA...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGGCAGCCTTAACCTTCTaGGCTCAAGTTATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQAALTF*AQVILL
Trigger: CAGGAGGATAACTTGAGCCCAGAAGGTTAAGGCTGC...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATATGCTGAGTTGCTTCTaGATGGGGCCACAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYMLSCF*MGPQEW
Trigger: CCACTCCTGTGGCCCCATCCAGAAGCAACTCAGCAT...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTCAGGCTGGAGTGCAGTaGCACAAGCTCGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLQAGVQ*HKLVSL
Trigger: CAGTGAGACGAGCTTGTGCCACTGCACTCCAGCCTG...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCTCCTTCTTTTCTTCCTaGTGCAGAGAGACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGASFFSS*CRETSL
Trigger: TAAGCTTGTCTCTCTGCATCAGGAAGAAAAGAAGGA...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAATCTTCACGGCGGTGGTaGTGGTGCCAGAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQSSRRW*WCQRPC
Trigger: ACATGGCCTCTGGCACCACCACCACCGCCGTGAAGA...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCGCAATCATAGGGGTGTaGGAAATAGTCCTTATGCAT +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPAIIGV*EIVLMH
Trigger: ATGCATAAGGACTATTTCCCACACCCCTATGATTGC...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACAGAGCAGGCTCACGTaGCACCTGCAGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIQSRLT*HLQGSW
Trigger: CCAGCTGCCCTGCAGGTGCCACGTGAGCCTGCTCTG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGAAAGGTGGTTTCAATTaGGGGAAGAAGCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQKGGFN*GKKQLE
Trigger: CTCCAACTGCTTCTTCCCTCAATTGAAACCACCTTT...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCACTACAGCTTTCCCATaGTGCTCACCATCCATCCTT +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCTTAFP*CSPSIL
Trigger: AAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCACGTCCTTCTTCACATaGTGGCAGGAAGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCTSFFT*WQEEVL
Trigger: CAACACTTCTTCCTGCCATCATGTGAAGAAGGACGT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGGTGTGCTGCCTTCCATaGCTTGCAAGGAGGACGCAA +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLVCCLP*LARRTQ
Trigger: TTGCGTCCTCCTTGCAAGGCATGGAAGGCAGCACAC...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACCGGTCCACCGAAACTaGTTCCTCGTGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQPVHRN*FLVLLP
Trigger: TGGAAGGAGCACGAGGAAGCAGTTTCGGTGGACCGG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGACAGAGCGGTGGCTGTaGCAACCTCACTGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWTERWL*QPHCAG
Trigger: TCCCGCGCAGTGAGGTTGGCACAGCCACCGCTCTGT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTCAGATCACCCCTACTaGCATAATTTTCTCACTGTT +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPSDHPY*HNFLTV
Trigger: AACAGTGAGAAAATTATGGCAGTAGGGGTGATCTGA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTAGCTACCTCCAGCCCTaGACAGCAACTCGTGCTAGC +
Preference number: 4 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSSYLQP*TATRAS
Trigger: GCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCT...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGGGAGCATCCTGTGGATaGCAGAGCAGGCTCACGTGG +
Preference number: 4 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSGASCG*QSRLTW
Trigger: CCACGTGAGCCTGCTCTGGCATCCACAGGATGCTCC...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCATCATCTTCAGGTTATaGAGGGTTTCTGACCATTCT +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAIIFRL*RVSDHS
Trigger: AGAATGGTCAGAAACCCTCCATAACCTGAAGATGAT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATTCTATCCTCCTTGCCTaGTGGCCTCTCATCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYSILLA*WPLISF
Trigger: AAAGCTGATGAGAGGCCACCAGGCAAGGAGGATAGA...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCTACCTACACTCAGTGTaGATAGCTTCAGCAAATTTC +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAYLHSV*IASANF
Trigger: GAAATTTGCTGAAGCTATCCACACTGAGTGTAGGTA...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCAAACTCCTTCTCCATTaGTTAAGAGTGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPKLLLH*LRVSGD
Trigger: ATCACCAGACACTCTTAACCAATGGAGAAGGAGTTT...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CAA 72 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTaGCGGAAACCAAAATGCTCACAACTGACCATGGTG +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHP*RKPKCSQLTMV
Trigger: CACCATGGTCAGTTGTGAGCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCACTGAGGCAAGTTTTTaGGCAGGAGTGAAATTTAAA +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGATEASF*AGVKFK
Trigger: TTTAAATTTCACTCCTGCTCAAAAACTTGCCTCAGT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGAAAAAGCTAGATTACTaGGTTCAGGATGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQKKLDY*VQDGAH
Trigger: ATGGGCACCATCCTGAACTCAGTAATCTAGCTTTTT...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCTGCCTTCCATGCCTTaGAAGGAGGACGCAATCAAC +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLLPSMP*KEDAIN
Trigger: GTTGATTGCGTCCTCCTTGCAAGGCATGGAAGGCAG...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR GCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAGTGTGCTGCCTTCCATaGCTTGCAAGGAGGACGCAA +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQVCCLP*LARRTQ
Trigger: TTGCGTCCTCCTTGCAAGGCATGGAAGGCAGCACAC...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR GCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATACCGGTCCACCGAAACTaGTTCCTCGTGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSTVLTVQKSMILFFSRIPVHRN*FLVLLP
Trigger: TGGAAGGAGCACGAGGAAGCAGTTTCGGTGGACCGG...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR GCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTCAAGGCAGGGGAATTaGAATAGAGAAAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPSRQGN*NRERVL
Trigger: TAAAACTCTTTCTCTATTGCAATTCCCCTGCCTTGA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCATTAGTCCATTCTCATaGTGCTGTAAAGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCISPFS*CCKGLP
Trigger: GGGCAGTCCTTTACAGCAGCATGAGAATGGACTAAT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACATTGAGCCAGATTGTGTaGACACTGGTAGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTLSQIV*TLVVPR
Trigger: CCTTGGAACTACCAGTGTGCACACAATCTGGCTCAA...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACAATCTTCACGGCGGTaGTGGTGGTGCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIQSSRR*WWCQRP
Trigger: TGGCCTCTGGCACCACCACCACCGCCGTGAAGATTG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACCTGACATTCCTAGTTaGAGGGGGTCTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQPDIPS*RGSLLP
Trigger: AGGGAGGAGAGACCCCCTCCAACTAGGAATGTCAGG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGCCAAACAATACAGTGTaGTTCCAGGAGATGAAGACA +
Preference number: 4 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQPNNTV*FQEMKT
Trigger: TGTCTTCATCTCCTGGAACCACACTGTATTGTTTGG...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGTCTGTGGACCCTATCTaGGGTATGGTAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLSVDPI*GMVVSS
Trigger: ACTGCTCACTACCATACCTCAGATAGGGTCCACAGA...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAAGATGGGGTTTGGCTTaGTCAGATCACCCCTACTGC +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQRWGLA*SDHPYC
Trigger: GCAGTAGGGGTGATCTGATCAAGCCAAACCCCATCT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATTCAGGATGGTGCCCATaGATAAATAGGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYSGWCP*INRAKH
Trigger: ATGCTTTGCCCTATTTATTCATGGGCACCATCCTGA...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCCAAAATGCTCACAACTaGCCATGGTGTTCACTTAGT +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCQNAHN*PWCSLS
Trigger: ACTAAGTGAACACCATGGTCAGTTGTGAGCATTTTG...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATGTTCTTCTTGCCTGCTaGCCAGATAGAGCTGATTTA +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYVLLAC*PDRADL
Trigger: TAAATCAGCTCTATCTGGGCAGCAGGCAAGAAGAAC...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCAATAACAAACTTATTTaGCTAGTAACCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IGVWEIVLMHAELLLDGANNKLI*LVTPGR
Trigger: TCTACCAGGGGTTACTAGGCAAATAAGTTTGTTATT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCTTGACCTCATGATCTaGCCGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISLDLMI*PPWPPK
Trigger: TTTGGGAGGCCAAGGCGGGCAGATCATGAGGTCAAG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAGTTCACTGCAACCTCTaGCTCCTGGGTTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQVHCNL*LLGSCD
Trigger: ATCGCATGAACCCAGGAGGCAGAGGTTGCAGTGAAC...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAGAACCTCTCTCGTTTTaGGGCAAAACGGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQEPLSF*GKTAQP
Trigger: TGGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTC...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CCA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTGAACCTCTCTCGTTTTaGGGCAAAACGGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSEPLSF*GKTAQP
Trigger: TGGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTC...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGGCTGTCAGGGCAGGGTaGCTGCATGGGTTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWAVRAG*LHGLLE
Trigger: TTCCAACAACCCATGCAGCCACCCTGCCCTGACAGC...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCCTCCAGAATAATGGCTaGAAACTGTTTATATCTACA +
Preference number: 4 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPLQNNG*KLFIST
Trigger: TGTAGATATAAACAGTTTCCAGCCATTATTCTGGAG...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATAGACATCAAATAGCATaGCCTCCAATGTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYRHQIA*PPMWNA
Trigger: GGCATTCCACATTGGAGGCCATGCTATTTGATGTCT...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATATCCAGGAGCATCCTGTaGATGCCAGAGCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASISRSIL*MPEQAH
Trigger: GTGAGCCTGCTCTGGCATCCACAGGATGCTCCTGGA...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TACAGCATCACAAGTGAGAAGTGTTCCAGGAAGTGTTCTTCAACAATATCCTCATTGGAAAATAGGTGTTaGTGGGGCCACAACCATGCC +
Preference number: 4 (lower is better)
Translates to: YSITSEKCSRKCSSTISSLENRC*WGHNHA
Trigger: GGCATGGTTGTGGCCCCACCAACACCTATTTTCCAA...TGAGGATATTGTTGAAGAACACTTCCTGGAACACTTCTCACTTGTGATGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTACAGTTCCACATAGCTaGGAAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLTVPHS*EGLRKL
Trigger: AAGTTTCCTGAGGCCTTCCCAGCTATGTGGAACTGT...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAATCTGTGGACCCTATCTaGGGTATGGTAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQSVDPI*GMVVSS
Trigger: ACTGCTCACTACCATACCTCAGATAGGGTCCACAGA...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR TCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATTCCTCTGTAGAAGGGTaGCTCTTGAATATTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYSSVEG*LLNIER
Trigger: CCTTTCAATATTCAAGAGTCACCCTTCTACAGAGGA...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCAACAAACAGGACTTGTaGGAACTCAGTATCATGAGA +
Preference number: 4 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCNKQDL*ELSIMR
Trigger: TCTCATGATACTGAGTTCTCACAAGTCCTGTTTGTT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATACTGCCTTCCATGCCTTaGAAGGAGGACGCAATCAAC +
Preference number: 4 (lower is better)
Translates to: PSTVLTVQKSMILFFSRILPSMP*KEDAIN
Trigger: GTTGATTGCGTCCTCCTTGCAAGGCATGGAAGGCAG...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR GCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCGGGTTCTTCTTGCCTaGTGCCCAGATAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISRVLLA*CPDRAD
Trigger: ATCAGCTCTATCTGGGCAGCAGGCAAGAAGAACCCG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACAAGTACCTCTGCAAGTTaGAGAGAACTGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTSTSAS*RELYFL
Trigger: CAGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACT...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CAA 72 bp AATAAAGTACACTTAGAAGAGGGCCAAGTGGGCAACTaGAGAAATCCAAGTGCCCTGTTTGACCTTAGACTT +
Preference number: 4 (lower is better)
Translates to: NKVHLEEGQVGN*RNPSALFDLRL
Trigger: AAGTCTAAGGTCAAACAGGGCACTTGGATTTCTCAAGTTGCCCACTTGGCCCTCTTCTAAGTGTACTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTGTAACTGCTTCCTGCTaGCAGAGGTGTGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISVTASC*QRCDGD
Trigger: ATCACCATCACACCTCTGTCAGCAGGAAGCAGTTAC...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATGCTTGCCCAAATCCTaGGATCTTACTAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQCLPKS*DLTRKL
Trigger: CAGCTTCCTAGTAAGATCTCAGGATTTGGGCAAGCA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAGAACTGAAGATAGCCTaGGAAGGACTCCGTACTTCT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQELKIA*EGLRTS
Trigger: AGAAGTACGGAGTCCTTCTCAGGCTATCTTCAGTTC...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATACAATGAGAAGCTATTaGGAAAGAAAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYTMRSY*ERKVAQ
Trigger: CTGGGCTACTTTTCTTTCTCAATAGCTTCTCATTGT...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAGGCATCAGATGGCTTaGCAAATGGAGTATCCACAT +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLRHQMA*QMEYPH
Trigger: ATGTGGATACTCCATTTGGCAAGCCATCTGATGCCT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580718.1
ENST00000644715.2
CDS-3UTR GCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATATCTCACTGCAAGCTCTaGTCACTGCAAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASISHCKL*SLQAPP
Trigger: AGGTGGAGCTTGCAGTGAGCAGAGCTTGCAGTGAGA...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAAAACGGCTCAGCCATTaGAATATGGCACACTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQKRLSH*NMAHSS
Trigger: AGAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTT...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAAAACGGCTCAGCCATTaGAATATGGCACACTCCTCT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQKRLSH*NMAHSS
Trigger: AGAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAGAACCTCTCTCGTTTTaGGGCAAAACGGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIEPLSF*GKTAQP
Trigger: TGGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTC...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGGAACCTCTCTCGTTTTaGGGCAAAACGGCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWEPLSF*GKTAQP
Trigger: TGGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTC...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATGTGAGCCACAGTGCTTaGTCAAGACTCATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYVSHSA*SRLIFK
Trigger: TTTAAAAATGAGTCTTGACCAAGCACTGTGGCTCAC...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACAAGTTCTTTGCCTTGCTaGGCCAATATATACATTGAG +
Preference number: 4 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTSSLPC*ANIYIE
Trigger: CTCAATGTATATATTGGCCCAGCAAGGCAAAGAACT...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCCCCGCAAAAATCCATaGCCCAATTCTTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISPRKNP*PNSLGN
Trigger: GTTTCCCAAAGAATTGGGTCATGGATTTTTGCGGGG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGATCAAGGAGGGACTCTaGAAATGTGGCAAGAACTCC +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHRLKGSILIKEGL*KCGKNS
Trigger: GGAGTTCTTGCCACATTTGCAGAGTCCCTCCTTGAT...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAACAGGTTCTTCCATCCTaGAACTTCAGTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQQVLPS*NFSSLP
Trigger: AGGCAAAGAACTGAAGTTCCAGGATGGAAGAACCTG...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACAATCAACTTGGCCTTaGGACTTCACTGCATTCTTA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQQSTWP*DFTAFL
Trigger: TAAGAATGCAGTGAAGTCTCAAGGCCAAGTTGATTG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTGTAAGCAGATGACCTaGAATACCATTGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWCKQMT*NTIALS
Trigger: GGACAGGGCAATGGTATTTCAGGTCATCTGCTTACA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTTGTGGTTCCAGGAGATaGAGACATCAAATAGCATGG +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISCGSRR*RHQIAW
Trigger: CCATGCTATTTGATGTCTTCATCTCCTGGAACCACA...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGGGCCAATATATACATTaGGCCAGATTGTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHRLKGSILGQYIH*ARLCAH
Trigger: GTGTGCACACAATCTGGCTCAATGTATATATTGGCC...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTTGGCCAATAAGCACATaGAAAGAAGTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLWPIST*KEVQHL
Trigger: AAGATGTTGAACTTCTTTTCATGTGCTTATTGGCCA...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp TATACATTGAGCCAGATTGTGTGCACACTGGTAGTTCCAAGGTGCAACAATCTTTGCATTTTACCAAATTaGCCTCCAGAAATACTGTAC +
Preference number: 4 (lower is better)
Translates to: YTLSQIVCTLVVPRCNNLCILPN*PPEILY
Trigger: GTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCA...AAGATTGTTGCACCTTGGAACTACCAGTGTGCACACAATCTGGCTCAATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATAAGGCATCAGATGGCTTaGCAAATGGAGTATCCACAT +
Preference number: 4 (lower is better)
Translates to: PSTVLTVQKSMILFFSRIRHQMA*QMEYPH
Trigger: ATGTGGATACTCCATTTGGCAAGCCATCTGATGCCT...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACAGGCTGTCCACATGTaGATGAGTCATGTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQQAVHM*MSHVFL
Trigger: TAAAAACACATGACTCATGCACATGTGGACAGCCTG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGATTTTTGTCACATCCTaGCCCAAATCCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWIFVTS*PKSMPR
Trigger: CCTGGGCATGGATTTGGGGCAGGATGTGACAAAAAT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATTAAAAAGGCAGCTCTaGCTGAGTGGACAAACTCAT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQLKRQL*LSGQTH
Trigger: ATGAGTTTGTCCACTCAGGCAGAGCTGCCTTTTTAA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCTTCCTCACATTCTTTaGCAGTATAGGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLLPHIL*QYRKVE
Trigger: CTCTACTTTCCTATACTGCCAAAGAATGTGAGGAAG...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACCCTCCCACAACATGTaGGGATTATGGGAACTACAA +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIPSHNM*GLWELQ
Trigger: TTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTGGAAACTTACAATCGTaGCAGAAGGGGAAACAAACA +
Preference number: 4 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSGNLQS*QKGKQT
Trigger: TGTTTGTTTCCCCTTCTGCCACGATTGTAAGTTTCC...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGATTCCCCTCATTCTTTaGGATCCCGAGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHRLKGSILIPLIL*DPEVLK
Trigger: TTTGAGAACCTCGGGATCCCAAAGAATGAGGGGAAT...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTAAGACAGTGGGGTACTaGCATAAGAAGAGACACATA +
Preference number: 4 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSKTVGY*HKKRHI
Trigger: TATGTGTCTCTTCTTATGCCAGTACCCCACTGTCTT...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CAA 72 bp TTGCCTGGTGGCCTCTCATCAGCTTTGCTGAGGTGGTaGAATTTTAAGGAAGGACTATTATCATTTAAACTA +
Preference number: 4 (lower is better)
Translates to: LPGGLSSALLRW*NFKEGLLSFKL
Trigger: TAGTTTAAATGATAATAGTCCTTCCTTAAAATTCAACCACCTCAGCAAAGCTGATGAGAGGCCACCAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTCCAGCTGGTTTATTCTaGGGGACTAATTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISPAGLF*GTNFIR
Trigger: CCTTATGAAATTAGTCCCTCAGAATAAACCAGCTGG...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTTCTGAGCTTAGATTTTaGCTAAAGCATACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISSELRF*LKHTGG
Trigger: GCCACCTGTATGCTTTAGTCAAAATCTAAGCTCAGA...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGGGTCATAATCATACTTaGCCCAAATGGCTCACACTA +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHRLKGSILGHNHT*PKWLTL
Trigger: TAGTGTGAGCCATTTGGGTCAAGTATGATTATGACC...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAAAGGCCCAAATAAATaGAGAAACATACCATGTCCA +
Preference number: 4 (lower is better)
Translates to: HILWQYRKVEITLHPLLLKGPNK*RNIPCP
Trigger: TGGACATGGTATGTTTCTGCATTTATTTGGGCCTTT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGATATTGGCATGCTTCTaGGGTTTTGCATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWILACF*GFASLL
Trigger: GAGGAGAGATGCAAAACCCCAGAAGCATGCCAATAT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATCAGCTTTGCTGAGGTaGTTGAATTTTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQSALLR*LNFKEG
Trigger: TCCTTCCTTAAAATTCAACCACCTCAGCAAAGCTGA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGACTAAAGCATACAGGTaGCTAAAGAAAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWTKAYR*LKKAQL
Trigger: CAGCTGGGCTTTCTTTAGCCACCTGTATGCTTTAGT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTCCCTCCAAACACCTTaGAAGCGACCATATCTGTAT +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWSLQTP*KRPYLY
Trigger: ATACAGATATGGTCGCTTCCAAGGTGTTTGGAGGGA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAACTGTACAGAAATCAATaGTCCTCTTCTTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQLYRNQ*SSSLAE
Trigger: TTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAG...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR TCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAATCTGCAGGAGTAATTaGAGAAGTTGCACATTTTGT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQICRSN*RSCTFC
Trigger: ACAAAATGTGCAACTTCTTCAATTACTCCTGCAGAT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTTCTTCTTCTTCTGGTaGGTAATCTCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWFFFFW*VISLAF
Trigger: AAATGCCAGGGAGATTACTCACCAGAAGAAGAAGAA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATTGAAAGGTTCAATATTGAGCAGCTTATTATCTTaGAGTCAATCTCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHRLKGSILSSLLS*SQSQRH
Trigger: GTGTCTCTGAGATTGACTTCAAGATAATAAGCTGCT...CAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp TGCCCTGACATTCTTAGACACCTATTAAGAATGAGGAAAAGTAAGGTACCATCTCAGATGCATGCAACATaGGTGAATCTTCAAAACAAA +
Preference number: 4 (lower is better)
Translates to: CPDILRHLLRMRKSKVPSQMHAT*VNLQNK
Trigger: TTTGTTTTGAAGATTCACTCATGTTGCATGCATCTG...AGATGGTACCTTACTTTTCCTCATTCTTAATAGGTGTCTAAGAATGTCAGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR GCA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAATCCACCCTTTATTGTTaGAAATTTAATAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQSTLYC*KFNRGR
Trigger: TCTCCCCCTATTAAATTTGCAACAATAAAGGGTGGA...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGATGTTTGAGCCTGCTTaGCCAAATCCTGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWMFEPA*PNPEIL
Trigger: TAAGATCTCAGGATTTGGGCAAGCAGGCTCAAACAT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACACCCATTATGTTCATaGTCCTGGAATTTATGGTTA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQHPLCS*SWNLWL
Trigger: TAACCATAAATTCCAGGAGCATGAACATAATGGGTG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGGCCTCCAATGTGGAATaGCATCAAATACAAAACTCC +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWASNVE*HQIQNS
Trigger: GGAGTTTTGTATTTGATGGCATTCCACATTGGAGGC...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATAAAATGCCCATACTTTTaGCCTGACATTCTTAGACAC +
Preference number: 4 (lower is better)
Translates to: PSTVLTVQKSMILFFSRIKCPYF*PDILRH
Trigger: GTGTCTAAGAATGTCAGGGCAAAAGTATGGGCATTT...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCTTCCTCACATTCTTTaGCAGTATAGGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSLPHIL*QYRKVE
Trigger: CTCTACTTTCCTATACTGCCAAAGAATGTGAGGAAG...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTCACTGAGGATCATCTaGAACTTGATCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWSLRII*NLIIFR
Trigger: CCTGAAGATGATCAAGTTCCAGATGATCCTCAGTGA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
3UTR CAA 72 bp GCCCAAATAAATGCAGAAACATACCATGTCCATCGATaGAAAGGTTCAATATTGTCAATTCTTCCCAAATCG +
Preference number: 4 (lower is better)
Translates to: AQINAETYHVHR*KGSILSILPKS
Trigger: CGATTTGGGAAGAATTGACAATATTGAACCTTTCAATCGATGGACATGGTATGTTTCTGCATTTATTTGGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR TCA 90 bp CCAAGTACTGTTCTGACTGTACAGAAATCAATGATCCTCTTCTTTAGCAGAATACTGTACAGAAATCAATaGTCCTCTTCTTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PSTVLTVQKSMILFFSRILYRNQ*SSSLAE
Trigger: TTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAG...TATTCTGCTAAAGAAGAGGATCATTGATTTCTGTACAGTCAGAACAGTACTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR TCA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTAGATCTCCTATACATTaGTCTTTAGATCAGCACAAG +
Preference number: 4 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISRSPIH*SLDQHK
Trigger: CTTGTGCTGATCTAAAGATCAATGTATAGGAGATCT...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGTCCACCCTTTATTGTTaGAAATTTAATAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSSTLYC*KFNRGR
Trigger: TCTCCCCCTATTAAATTTGCAACAATAAAGGGTGGA...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR GCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGTGCATTTTACCAAATTaGCCTCCAGAAATACTGTAC +
Preference number: 4 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSCILPN*PPEILY
Trigger: GTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCA...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR GCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGATTGTCTTTCCCTGCTaGCAGTTGCAACCTATTATT +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWIVFPC*QLQPII
Trigger: AATAATAGGTTGCAACTGGCAGCAGGGAAAGACAAT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR GCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACAAGAAAAGTACCTCTaGAAGTTGGAGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIQEKYL*KLERTV
Trigger: TACAGTTCTCTCCAACTTGCAGAGGTACTTTTCTTG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CCA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGGATGTCTCCACAAGTTaGATATTAACCTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSDVSTS*ILTLPN
Trigger: ATTTGGCAAGGTTAATATCCAACTTGTGGAGACATC...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419385.5
CDS-3UTR CCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATACTTCCTCACATTCTTTaGCAGTATAGGAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASILPHIL*QYRKVE
Trigger: CTCTACTTTCCTATACTGCCAAAGAATGTGAGGAAG...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CCA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGAATTCTTTGGGAAACTaGATGAAGGTCAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWNSLGN*MKVSLL
Trigger: CAGAAGACTGACCTTCATCCAGTTTCCCAAAGAATT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAAATATTTGAGTCCTTGTaGATGAACTGTAACCTAACT +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQIFESL*MNCNLT
Trigger: AGTTAGGTTACAGTTCATCCACAAGGACTCAAATAT...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CCA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAACATCCTTATACCTTATaGCTTTCCTTACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQHPYTL*LSLPKT
Trigger: TGTTTTTGGTAAGGAAAGCCATAAGGTATAAGGATG...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR TCA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAGCTTTGCATAAGGAGTaGATGATTGAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: ILPNCPPEILYQFTVASIALHKE*MIENKE
Trigger: TTCTTTGTTCTCAATCATTCACTCCTTATGCAAAGC...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
3UTR CAA 72 bp AGAAGGCTATTTAATCAAGAAAAGTACCTCTGCAAGTaGGAGAGAACTGTACTTTCTGAACATAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RRLFNQEKYLCK*ERTVLSEHSKK
Trigger: TTTCTTGCTATGTTCAGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACTTTTCTTGATTAAATAGCCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS GCA 90 bp GTCCCCCGGCGCGGGGGCGAGAAGGCATCCGGCAGGGCGAACCGCTaGGGCTGGGAGGGCTCATCTCACCTTCACGGCGGTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: VPRRGGEKASGRANR*GWEGSSHLHGGGGG
Trigger: ACCACCACCACCGCCGTGAAGGTGAGATGAGCCCTCCCAGCCGCAGCGGTTCGCCCTGCCGGATGCCTTCTCGCCCCCGCGCCGGGGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS CCA 90 bp CGGCGCGGGGGCGAGAAGGCATCCGGCAGGGCGAACCGCTGCGGCTaGGAGGGCTCATCTCACCTTCACGGCGGTGGTGGTGGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: RRGGEKASGRANRCG*EGSSHLHGGGGGAR
Trigger: TCTGGCACCACCACCACCGCCGTGAAGGTGAGATGAGCCCTCCCAGCCGCAGCGGTTCGCCCTGCCGGATGCCTTCTCGCCCCCGCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS GCA 90 bp ACCAATTATTCCAATCCTCTCCTCGCGCGGCAAGTGAGTCCCGAGTaGCGCGCCCCAGTCCCTCCCCGCGGCGGCAAGGGACGCACGGGC +
Preference number: 5 (lower is better)
Translates to: TNYSNPLLARQVSPE*RAPVPPRGGKGRTG
Trigger: GCCCGTGCGTCCCTTGCCGCCGCGGGGAGGGACTGGGGCGCGGCACTCGGGACTCACTTGCCGCGCGAGGAGAGGATTGGAATAATTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS TCA 90 bp GCACCAGGAGACGGTCACAGAAGCTGCAGGCGCCCGGACACCTCCTaGCTCCAGCCGGGTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: APGDGHRSCRRPDTS*LQPGVFLGRRVVLR
Trigger: CCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGCTGGAGTCAGGAGGTGTCCGGGCGCCTGCAGCTTCTGTGACCGTCTCCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS-3UTR CAA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCAGAACCTCTCTCGTTTaGGGGCAAAACGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SHGSYLQPCTATRASEGGRTSLV*GQNGSA
Trigger: GGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTCT...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS CCA 90 bp CGGACACCTCCTGACTCCAGCCGGGTGTCTTTCTTGGAAGAAGAGTaGTTCTCAGGAATGGTGGTGGCATGGGTGCAGCCTCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: RTPPDSSRVSFLEEE*FSGMVVAWVQPLPS
Trigger: GGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGCTGGAGTCAGGAGGTGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 90 bp CCAGCCGGGTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTaGTGGCATGGGTGCAGCCTCTCCCATCCACGACCTCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: PAGCLSWKKSGSQEW*WHGCSLSHPRPLSL
Trigger: TAGAGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 90 bp ACTCCAGCCGGGTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATaGTGGTGGCATGGGTGCAGCCTCTCCCATCCACGACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TPAGCLSWKKSGSQE*WWHGCSLSHPRPLS
Trigger: AGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGCTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGGGGCCACAGGAGTGGTaGGTGGGTCCAGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQGPQEW*VGPGGA
Trigger: GGCTCCACCTGGACCCACCAACCACTCCTGTGGCCC...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCCTCACCATCCATCCTTaGCGGAAACCAAAATGCTCA +
Preference number: 5 (lower is better)
Translates to: SHGSYLQPCTATRASEGGLTIHP*RKPKCS
Trigger: TGAGCATTTTGGTTTCCGCAAAGGATGGATGGTGAG...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS CCA 90 bp GCCGGGTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTGGTaGCATGGGTGCAGCCTCTCCCATCCACGACCTCTCTCTCTAAAG +
Preference number: 5 (lower is better)
Translates to: AGCLSWKKSGSQEWW*HGCSLSHPRPLSLK
Trigger: CTTTAGAGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 90 bp AGAAGCCGGAAGCATACAAAAGAGCAAGTAAGCAGTTCTCCCACGTaGGCCGCAGGCAACAAGCAGAGTCAGAGAGCGGAAGCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: RSRKHTKEQVSSSPT*AAGNKQSQRAEAGV
Trigger: GACTCCAGCTTCCGCTCTCTGACTCTGCTTGTTGCCTGCGGCCCACGTGGGAGAACTGCTTACTTGCTCTTTTGTATGCTTCCGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS GCA 90 bp CTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTGGTGGCATGGGTaGAGCCTCTCCCATCCACGACCTCTCTCTCTAAAGGGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: LSWKKSGSQEWWWHG*SLSHPRPLSLKGCL
Trigger: TAGGCACCCCTTTAGAGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS GCA 90 bp AGTATCCAGCCAGGTCTAAGGGAGACAGGGGCAGGATTTCACCTCTaGCATGTCCCACTGATGGGAAGTCTAGGAGTCCTCTGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SIQPGLRETGAGFHL*HVPLMGSLGVLCRR
Trigger: CCTTCTACAGAGGACTCCTAGACTTCCCATCAGTGGGACATGGCAGAGGTGAAATCCTGCCCCTGTCTCCCTTAGACCTGGCTGGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577563.1
ENST00000580900.5
ENST00000616982.1
CDS CCA 90 bp GTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTGGTGGCATaGGTGCAGCCTCTCCCATCCACGACCTCTCTCTCTAAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: VSFLEEEWFSGMVVA*VQPLPSTTSLSKGV
Trigger: CACCCCTTTAGAGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCGGGTGGCTGCATGGGTaGTTGGAAGCAGTATCCAGC +
Preference number: 5 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPGWLHG*LEAVSS
Trigger: GCTGGATACTGCTTCCAACAACCCATGCAGCCACCC...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCAGAACCTCTCTCGTTTaGGGGCAAAACGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IGVWEIVLMHAELLLDGARTSLV*GQNGSA
Trigger: GGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTCT...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp AGCCATGGTAGCTACCTCCAGCCCTGCACAGCAACTCGTGCTAGCGAAGGGGGCCTTACAACATACTCTTaGATAGGCAAGGGCATGAAA +
Preference number: 5 (lower is better)
Translates to: SHGSYLQPCTATRASEGGLTTYS*IGKGMK
Trigger: TTTCATGCCCTTGCCTATCAAAGAGTATGTTGTAAG...GCCCCCTTCGCTAGCACGAGTTGCTGTGCAGGGCTGGAGGTAGCTACCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS CCA 90 bp AGCCCTTTTCACCCTGGGCAAGATAGAATTCCCATGGATTGGTGCTaGAAGAGAGAGATTGCCAGGGAGTATAAAGATGTCCAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: SPFHPGQDRIPMDWC*KREIAREYKDVQGY
Trigger: GTACCCCTGGACATCTTTATACTCCCTGGCAATCTCTCTCTTCCAGCACCAATCCATGGGAATTCTATCTTGCCCAGGGTGAAAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTGCATCTCTCCTCTTTaGATTTTTCCTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPCISPL*IFPWGR
Trigger: CCTGCCCCAAGGAAAAATCAAAAGAGGAGAGATGCA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCCCAATCAACTTGGCCTaGAGACTTCACTGCATTCTT +
Preference number: 5 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAPINLA*RLHCIL
Trigger: AAGAATGCAGTGAAGTCTCAAGGCCAAGTTGATTGG...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACACCAGAGTTTCCTTCCTaGAAACAAGCCATGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTPEFPS*KQAMVA
Trigger: AGCTACCATGGCTTGTTTCAAGGAAGGAAACTCTGG...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTTAAACTCCACGATTTaGCCTCTTAGTGCCCATGTT +
Preference number: 5 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPLNSTI*PLSAHV
Trigger: AACATGGGCACTAAGAGGCAAAATCGTGGAGTTTAA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCGCTTTGCTGAGGTGGTaGAATTTTAAGGAAGGACTA +
Preference number: 5 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPALLRW*NFKEGL
Trigger: TAGTCCTTCCTTAAAATTCAACCACCTCAGCAAAGC...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp TCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAATTCAACAGGGCCAATATATACATaGAGCCAGATTGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: SHWVPPTTCGDYGNYNSTGPIYT*SQIVCT
Trigger: TGTGCACACAATCTGGCTCAATGTATATATTGGCCC...TGTTGAATTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGCAAAGGTGGTTTCAATaGAGGGAAGAAGCAGTTGGA +
Preference number: 5 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQQRWFQ*REEAVG
Trigger: TCCAACTGCTTCTTCCCTCAATTGAAACCACCTTTG...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATAGGGGTGTGGGAAATAGTCCTTATGCATGCTGAGTTGCTTCTGGATGGGGCCGAAAGCCTTTCACTATaGCCTCTGAGCTTAGATTTT +
Preference number: 5 (lower is better)
Translates to: IGVWEIVLMHAELLLDGAESLSL*PLSLDF
Trigger: AAAATCTAAGCTCAGAGGCAATAGTGAAAGGCTTTC...GGCCCCATCCAGAAGCAACTCAGCATGCATAAGGACTATTTCCCACACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATGACGTGTCTCCCACATaGCAGTTCTCAAATTTGGCC +
Preference number: 5 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYDVSPT*QFSNLA
Trigger: GGCCAAATTTGAGAACTGCAATGTGGGAGACACGTC...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS CCA 90 bp CCCATACCAGCTATAATGCTGAGGCCCATAAGAAGGGGAATTAATTaGATAGCCCTTTTCACCCTGGGCAAGATAGAATTCCCATGGATT +
Preference number: 5 (lower is better)
Translates to: PIPAIMLRPIRRGIN*IALFTLGKIEFPWI
Trigger: AATCCATGGGAATTCTATCTTGCCCAGGGTGAAAAGGGCTATCCAATTAATTCCCCTTCTTATGGGCCTCAGCATTATAGCTGGTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS-3UTR CAA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAAGAACCTCTCTCGTTTaGGGGCAAAACGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQRTSLV*GQNGSA
Trigger: GGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTCT...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGGGACTTTTCTATCTATaGGGAGATTGTCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQGLFYL*GDCLSL
Trigger: CAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATGGGCAGCTTGAAGGCTAAAGGCAAGATGGGGTTTGGCTTGATCAGATCACCCTTTATACATGTAGAGTaGGCTAAATGGGAGACGTAT +
Preference number: 5 (lower is better)
Translates to: MGSLKAKGKMGFGLIRSPFIHVE*AKWETY
Trigger: ATACGTCTCCCATTTAGCCAACTCTACATGTATAAA...GGGTGATCTGATCAAGCCAAACCCCATCTTGCCTTTAGCCTTCAAGCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAAAACGGCTCAGCCATaGGAATATGGCACACTCCTC +
Preference number: 5 (lower is better)
Translates to: HILWQYRKVEITLHPLLLKTAQP*EYGTLL
Trigger: GAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTTT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CAA 90 bp TTTGATGCATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGAGAACCTCTCTCGTTTaGGGGCAAAACGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FDAFYQIALQKYCTNLQSRTSLV*GQNGSA
Trigger: GGCTGAGCCGTTTTGCCCCAAAACGAGAGAGGTTCT...CGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAATGCATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CAA 90 bp AATTACCTCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAAGGTTTTAAAGAGAAATaGCTAGATGTAGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: NYLPLGPSHNMWGLWELQGFKEK*LDVEFP
Trigger: TGGGAACTCTACATCTAGCAATTTCTCTTTAAAACC...TTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp AGAAGTTGCACATTTTGTGACCTCCAGAATAATGGCTGGAAACTGTTTATATCTACTCCTCTATCCTCCTaGCCTGGTGGCCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: RSCTFCDLQNNGWKLFISTPLSS*PGGLSS
Trigger: TGATGAGAGGCCACCAGGCAAGGAGGATAGAGGAGT...AGATATAAACAGTTTCCAGCCATTATTCTGGAGGTCACAAAATGTGCAACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp AATTACCTCCCACTGGGTCCCTCCCACAACATGTGGGGATTATGGGAACTACAACCCATCAGATACTCCTaGAAACCTTATCAAATTGTT +
Preference number: 5 (lower is better)
Translates to: NYLPLGPSHNMWGLWELQPIRYS*KPYQIV
Trigger: AACAATTTGATAAGGTTTCAAGGAGTATCTGATGGG...TTGTAGTTCCCATAATCCCCACATGTTGTGGGAGGGACCCAGTGGGAGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp AACTACAGCTTTCCCATGATGCTCACCATCCATCCTTTGCGGAAACCAAAATGCACTACCCTACTAGTCTaGGTAGATTTCCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: NYSFPMMLTIHPLRKPKCTTLLV*VDFLDL
Trigger: AAGATCGAGGAAATCTACCAAGACTAGTAGGGTAGT...GCATTTTGGTTTCCGCAAAGGATGGATGGTGAGCATCATGGGAAAGCTGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAAAAACGGCTCAGCCATaGGAATATGGCACACTCCTC +
Preference number: 5 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQKTAQP*EYGTLL
Trigger: GAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTTT...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTGGCTGCATGGGTTGTaGGAAGCAGTATCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWWLHGL*EAVSSQ
Trigger: CTGGCTGGATACTGCTTCCAACAACCCATGCAGCCA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGTTTCCCTGCTGCCAGTaGCAACCTATTATTATTTTA +
Preference number: 5 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQFPCCQ*QPIIIL
Trigger: TAAAATAATAATAGGTTGCAACTGGCAGCAGGGAAA...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ACCAAGTGTCTCCCAAAGTTAGCTTGGCCTAAGCCCAGGAATAATTATGGGCAGTCTATATTTGAGTCCTaGTGGATGAACTGTAACCTA +
Preference number: 5 (lower is better)
Translates to: TKCLPKLAWPKPRNNYGQSIFES*WMNCNL
Trigger: TAGGTTACAGTTCATCCACAAGGACTCAAATATAGA...CTGCCCATAATTATTCCTGGGCTTAGGCCAAGCTAACTTTGGGAGACACTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATTCAGTTCTAGCCAACTaGTCCATACAAGAGTCATTC +
Preference number: 5 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYSVLAN*SIQESF
Trigger: GAATGACTCTTGTATGGACAAGTTGGCTAGAACTGA...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGAAAACGGCTCAGCCATaGGAATATGGCACACTCCTC +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWKTAQP*EYGTLL
Trigger: GAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTTT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAAAAACGGCTCAGCCATaGGAATATGGCACACTCCTC +
Preference number: 5 (lower is better)
Translates to: ILPNCPPEILYQFTVASIKTAQP*EYGTLL
Trigger: GAGGAGTGTGCCATATTCCAATGGCTGAGCCGTTTT...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CAA 90 bp TACAGCATCACAAGTGAGAAGTGTTCCAGGAAGTGTTCTTCAACAATATCCTCATTTCTCAGAAAGCTGTaGCAAACCCAAGTACTGTTC +
Preference number: 5 (lower is better)
Translates to: YSITSEKCSRKCSSTISSFLRKL*QTQVLF
Trigger: GAACAGTACTTGGGTTTGCAACAGCTTTCTGAGAAA...TGAGGATATTGTTGAAGAACACTTCCTGGAACACTTCTCACTTGTGATGCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGTGGGTCTGCAGCAGCTaGCTTTTTGCCATCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWWVCSS*LFAILK
Trigger: CTTCAAGATGGCAAAAAGCAAGCTGCTGCAGACCCA...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp GGACTTTTCTATCTATTGGGAGATTGTCTTTCCCTGCTGCCAGTTGCAACCTATGAGATCTCCTATACATaGATCTTTAGATCAGCACAA +
Preference number: 5 (lower is better)
Translates to: GLFYLLGDCLSLLPVATYEISYT*IFRSAQ
Trigger: TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTC...ATAGGTTGCAACTGGCAGCAGGGAAAGACAATCTCCCAATAGATAGAAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp CAACATGTGGGGATTATGGGAACTACAATTCAACATGAGATTTGGGTGGGGACATGGAGGGTAACTGTTTaGTTTACAATTAGCAGCTTA +
Preference number: 5 (lower is better)
Translates to: QHVGIMGTTIQHEIWVGTWRVTV*FTISSL
Trigger: TAAGCTGCTAATTGTAAACAAAACAGTTACCCTCCA...TGTCCCCACCCAAATCTCATGTTGAATTGTAGTTCCCATAATCCCCACATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAAGGATGTCTCCACAAGTaGGATATTAACCTTGCCAAA +
Preference number: 5 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQGCLHK*DINLAK
Trigger: TTTGGCAAGGTTAATATCCAACTTGTGGAGACATCC...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419385.5
CDS-3UTR CAA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAATTTCTCAGAAAGCTGTaGCAAACCCAAGTACTGTTC +
Preference number: 5 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQFLRKL*QTQVLF
Trigger: GAACAGTACTTGGGTTTGCAACAGCTTTCTGAGAAA...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAAATTCCCCTCATTCTTaGGGATCCCGAGGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: ILPNCPPEILYQFTVASINSPHS*GSRGSQ
Trigger: TTGAGAACCTCGGGATCCCAAAGAATGAGGGGAATT...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGCAACTTACAACATACTCTTaGATAGGCAAGGGCATGAAA +
Preference number: 5 (lower is better)
Translates to: ILWQYRKVEITLHPLLLQLTTYS*IGKGMK
Trigger: TTTCATGCCCTTGCCTATCAAAGAGTATGTTGTAAG...TTGCAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419385.5
ENST00000580718.1
ENST00000644715.2
CDS-3UTR CAA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGGGTTTTAAAGAGAAATaGCTAGATGTAGAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: HILWQYRKVEITLHPLLLGFKEK*LDVEFP
Trigger: TGGGAACTCTACATCTAGCAATTTCTCTTTAAAACC...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419385.5
ENST00000644715.2
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGCATGCTTCTGGGGTTTaGCATCTCTCCTCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWHASGV*HLSSFD
Trigger: ATCAAAAGAGGAGAGATGCAAAACCCCAGAAGCATG...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp TGGACAAACTCATCACTGGAGATCTCCTATACATTGATCTTTAGATCAGCACAATATATTCATAGCAACTaGAAGACGTGTCTCCCACAT +
Preference number: 5 (lower is better)
Translates to: WTNSSLEISYTLIFRSAQYIHSN*KTCLPH
Trigger: ATGTGGGAGACACGTCTTCAAGTTGCTATGAATATA...TTGTGCTGATCTAAAGATCAATGTATAGGAGATCTCCAGTGATGAGTTTGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp CACATTCTTTGGCAGTATAGGAAAGTAGAGATTACCCTCCACCCTTTATTGTTGAAAAGGTTCTGTATCTaGATCCTGAAGTATCCTGTA +
Preference number: 5 (lower is better)
Translates to: HILWQYRKVEITLHPLLLKRFCI*ILKYPV
Trigger: TACAGGATACTTCAGGATCAAGATACAGAACCTTTT...CAACAATAAAGGGTGGAGGGTAATCTCTACTTTCCTATACTGCCAAAGAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAAAGTACCTCTGCAAGTaGGAGAGAACTGTACTTTCT +
Preference number: 5 (lower is better)
Translates to: ILPNCPPEILYQFTVASIKYLCK*ERTVLS
Trigger: AGAAAGTACAGTTCTCTCCAACTTGCAGAGGTACTT...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp ATTTTACCAAATTGCCCTCCAGAAATACTGTACCAATTTACAGTCGCATCAATAGTAGGCAAAGATTTCTaGGAACACACAAAAAGCACC +
Preference number: 5 (lower is better)
Translates to: ILPNCPPEILYQFTVASIVGKDF*EHTKST
Trigger: GGTGCTTTTTGTGTGTTCCAAGAAATCTTTGCCTAC...TATTGATGCGACTGTAAATTGGTACAGTATTTCTGGAGGGCAATTTGGTAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGGCGACCATATCTGTATaGTTAACCAATACTTGTGGA +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWATISV*LTNTCG
Trigger: TCCACAAGTATTGGTTAACAATACAGATATGGTCGC...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS-3UTR CAA 90 bp AATCCAAATTGTGTTTCTGGCAGATGGAACAAGTTAAGATTATCTAAAGGATGGATTTCTGAATCCAAATaGTGTTTCTGGCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: NPNCVSGRWNKLRLSKGWISESK*CFWQME
Trigger: TTCCATCTGCCAGAAACACAATTTGGATTCAGAAAT...CCATCCTTTAGATAATCTTAACTTGTTCCATCTGCCAGAAACACAATTTGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS GCA 72 bp CGCGGGGGCGAGAAGGCATCCGGCAGGGCGAACCGCTaGGGCTGGGAGGGCTCATCTCACCTTCACGGCGGT +
Preference number: 6 (lower is better)
Translates to: RGGEKASGRANR*GWEGSSHLHGG
Trigger: ACCGCCGTGAAGGTGAGATGAGCCCTCCCAGCCGCAGCGGTTCGCCCTGCCGGATGCCTTCTCGCCCCCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS GCA 72 bp TCCAATCCTCTCCTCGCGCGGCAAGTGAGTCCCGAGTaGCGCGCCCCAGTCCCTCCCCGCGGCGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: SNPLLARQVSPE*RAPVPPRGGKG
Trigger: TCCCTTGCCGCCGCGGGGAGGGACTGGGGCGCGGCACTCGGGACTCACTTGCCGCGCGAGGAGAGGATTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS CCA 72 bp GGCGAGAAGGCATCCGGCAGGGCGAACCGCTGCGGCTaGGAGGGCTCATCTCACCTTCACGGCGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GEKASGRANRCG*EGSSHLHGGGG
Trigger: ACCACCACCGCCGTGAAGGTGAGATGAGCCCTCCCAGCCGCAGCGGTTCGCCCTGCCGGATGCCTTCTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460874.6
CDS GCA 72 bp ACTAAGGGAACCAAGCGAGCCACAGAGCGGTGGCTGTaGCAACCTCACTGCGCGGGAGTGAGCAGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: TKGTKRATERWL*QPHCAGVSSAE
Trigger: CTCCGCACTGCTCACTCCCGCGCAGTGAGGTTGGCACAGCCACCGCTCTGTGGCTCGCTTGGTTCCCTTAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644715.2
CDS CAA 90 bp GCTGCAGGCGCCCGGACACCTCCTGACTCCAGCCGGGTGTCTTTCTaGGAAGAAGAGTGGTTCTCAGGAATGGTGGTGGCATGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: AAGARTPPDSSRVSF*EEEWFSGMVVAWVQ
Trigger: CTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCCGGCTGGAGTCAGGAGGTGTCCGGGCGCCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS TCA 72 bp GACGGTCACAGAAGCTGCAGGCGCCCGGACACCTCCTaGCTCCAGCCGGGTGTCTTTCTTGGAAGAAGAGTG +
Preference number: 6 (lower is better)
Translates to: DGHRSCRRPDTS*LQPGVFLGRRV
Trigger: CACTCTTCTTCCAAGAAAGACACCCGGCTGGAGTCAGGAGGTGTCCGGGCGCCTGCAGCTTCTGTGACCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 72 bp CTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTGGTaGCATGGGTGCAGCCTCTCCCATCCACGACCTCTC +
Preference number: 6 (lower is better)
Translates to: LSWKKSGSQEWW*HGCSLSHPRPL
Trigger: GAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 72 bp GGGTGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATaGTGGTGGCATGGGTGCAGCCTCTCCCATCCACGA +
Preference number: 6 (lower is better)
Translates to: GCLSWKKSGSQE*WWHGCSLSHPR
Trigger: TCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS GCA 72 bp AAGAAGAGTGGTTCTCAGGAATGGTGGTGGCATGGGTaGAGCCTCTCCCATCCACGACCTCTCTCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: KKSGSQEWWWHG*SLSHPRPLSLK
Trigger: CTTTAGAGAGAGAGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 72 bp TGTCTTTCTTGGAAGAAGAGTGGTTCTCAGGAATGGTaGTGGCATGGGTGCAGCCTCTCCCATCCACGACCT +
Preference number: 6 (lower is better)
Translates to: CLSWKKSGSQEW*WHGCSLSHPRP
Trigger: AGGTCGTGGATGGGAGAGGCTGCACCCATGCCACCACCATTCCTGAGAACCACTCTTCTTCCAAGAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS CCA 72 bp AAGCATACAAAAGAGCAAGTAAGCAGTTCTCCCACGTaGGCCGCAGGCAACAAGCAGAGTCAGAGAGCGGAA +
Preference number: 6 (lower is better)
Translates to: KHTKEQVSSSPT*AAGNKQSQRAE
Trigger: TTCCGCTCTCTGACTCTGCTTGTTGCCTGCGGCCCACGTGGGAGAACTGCTTACTTGCTCTTTTGTATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS TCA 72 bp TGGCTTCTCCATCTTATCCTTCATTCCGTGGACCTCTaGAGCACCACAGGTCATGAGGAGGCTAAGAAACCA +
Preference number: 6 (lower is better)
Translates to: WLLHLILHSVDL*STTGHEEAKKP
Trigger: TGGTTTCTTAGCCTCCTCATGACCTGTGGTGCTTCAGAGGTCCACGGAATGAAGGATAAGATGGAGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427788.2
CDS CCA 72 bp CCTGTTCCACCAATTATTCCAATAGTATTACGCTGCTaGGGAAAACTTCAGCGCGGAGAAGGCCTACGTTTG +
Preference number: 6 (lower is better)
Translates to: PVPPIIPIVLRC*GKLQRGEGLRL
Trigger: CAAACGTAGGCCTTCTCCGCGCTGAAGTTTTCCCCAGCAGCGTAATACTATTGGAATAATTGGTGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579422.5
CDS TCA 72 bp TTCCTTTCAGAGTTGGCTATAGGTCAAGGAGGCTTTTaGGATTCCGGCAGTTTAGGTTCCCATACCAGCTAT +
Preference number: 6 (lower is better)
Translates to: FLSELAIGQGGF*DSGSLGSHTSY
Trigger: ATAGCTGGTATGGGAACCTAAACTGCCGGAATCTCAAAAGCCTCCTTGACCTATAGCCAACTCTGAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS CAA 72 bp TTTCCTTTCAGAGTTGGCTATAGGTCAAGGAGGCTTTaGAGATTCCGGCAGTTTAGGTTCCCATACCAGCTA +
Preference number: 6 (lower is better)
Translates to: FPFRVGYRSRRL*RFRQFRFPYQL
Trigger: TAGCTGGTATGGGAACCTAAACTGCCGGAATCTCAAAAGCCTCCTTGACCTATAGCCAACTCTGAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS TCA 72 bp ATTCCTCCCTGTGCTGCCATTAACATATCTAGTCCTTaGCAGTTTTGGAGGACTACAACTGCTAAAGTGTTA +
Preference number: 6 (lower is better)
Translates to: IPPCAAINISSP*QFWRTTTAKVL
Trigger: TAACACTTTAGCAGTTGTAGTCCTCCAAAACTGTCAAGGACTAGATATGTTAATGGCAGCACAGGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS CCA 72 bp ATATTGAAAGGATGGTATCCCTCACTGAGGATCATCTaGAACTTGATCATCTTCAGGTTATGGAGGGTTTCT +
Preference number: 6 (lower is better)
Translates to: ILKGWYPSLRII*NLIIFRLWRVS
Trigger: AGAAACCCTCCATAACCTGAAGATGATCAAGTTCCAGATGATCCTCAGTGAGGGATACCATCCTTTCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580900.5
CDS CAA 72 bp GGTGAGAGAAAGGAGACAAATTGGGTTATTAGATTTTaGAAGACATGGACTGAAAGGAGCAAAAGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: GERKETNWVIRF*KTWTERSKSRG
Trigger: GCCTCTACTTTTGCTCCTTTCAGTCCATGTCTTCAAAAATCTAATAACCCAATTTGTCTCCTTTCTCTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616982.1
CDS TCA 72 bp GTGAGAGAAAGGAGACAAATTGGGTTATTAGATTTTTaGAGACATGGACTGAAAGGAGCAAAAGTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VRERRQIGLLDF*RHGLKGAKVEA
Trigger: AGCCTCTACTTTTGCTCCTTTCAGTCCATGTCTTCAAAAATCTAATAACCCAATTTGTCTCCTTTCTCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616982.1