RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000057935

Ensembl transcript IDs: ENST00000405094.2, ENST00000405592.5, ENST00000406652.5, ENST00000406911.5, ENST00000407270.7, ENST00000409019.5, ENST00000430763.5, ENST00000433553.5, ENST00000454356.5, ENST00000467925.5, ENST00000478602.1, ENST00000482875.5, ENST00000484780.5, ENST00000491314.1

Found 963 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTaGGTCGCCTGTCCCAGGCTCCCAGGGCAGCTGCTTCCAACTGGG +
Preference number: 1 (lower is better)
Translates to: PSAPCSALSGRGLTR*VACPRLPGQLLPTG
Trigger: CCCAGTTGGAAGCAGCTGCCCTGGGAGCCTGGGACAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp GGACAGCAGTGGGGCATAAACACCAGGCTCAGACATGACACCGAGTaGACTGAGGCCACGCACAGCCCCACCTGCTTGCCCTCAGCCCCC +
Preference number: 1 (lower is better)
Translates to: GQQWGINTRLRHDTE*TEATHSPTCLPSAP
Trigger: GGGGGCTGAGGGCAAGCAGGTGGGGCTGTGCGTGGCCTCAGTGCACTCGGTGTCATGTCTGAGCCTGGTGTTTATGCCCCACTGCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp CCCACCCTCAGCGCCCCAAGCCAAGACCCAGCACAGCTCCAAGAGTaGGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTA +
Preference number: 1 (lower is better)
Translates to: PTLSAPSQDPAQLQE*VVVETSHARPCRSL
Trigger: TAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCTTGGAGCTGTGCTGGGTCTTGGCTTGGGGCGCTGAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp TCCCAGGCTCCCAGGGCAGCTGCTTCCAACTGGGTTTCACTACTGTaGGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAGGCT +
Preference number: 1 (lower is better)
Translates to: SQAPRAAASNWVSLL*GTCRTLEAKRRGEA
Trigger: AGCCTCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACCCAGTTGGAAGCAGCTGCCCTGGGAGCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp CCCCAGAAAGGGAGCGGGTGGCTGGGAAACCCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCGGCACCCT +
Preference number: 1 (lower is better)
Translates to: PQKGSGWLGNPLSTK*FQRQRHRLEAPRHP
Trigger: AGGGTGCCGAGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTTTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp GGGGCAGCTCCTCCACCTCCCCTCGCCAGGGACTTAGGACAGCAGTaGGGCATAAACACCAGGCTCAGACATGACACCGAGTGCACTGAG +
Preference number: 1 (lower is better)
Translates to: GAAPPPPLARDLGQQ*GINTRLRHDTECTE
Trigger: CTCAGTGCACTCGGTGTCATGTCTGAGCCTGGTGTTTATGCCCCACTGCTGTCCTAAGTCCCTGGCGAGGGGAGGTGGAGGAGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp ATCCTTGCAGCTGCCAGCACAAGTAGCACAGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCCACCAAGGGCTCGTGCCGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: ILAAASTSSTATQHS*VANCDATKGSCRGQ
Trigger: CTGCCCTCGGCACGAGCCCTTGGTGGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGCTGTGCTACTTGTGCTGGCAGCTGCAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp CTCTCTTGCGCACCTTTAAGAAGTGAAGGGTGGGCAGGCGATGACTaGGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGTCCTCACCCC +
Preference number: 1 (lower is better)
Translates to: LSCAPLRSEGWAGDD*ARGGDSLQSLCPHP
Trigger: GGGGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTTCACTTCTTAAAGGTGCGCAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp CCTGTGCCTGCAAACAGAGGGCAGGGGAGTTGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGCGCTGAGCTATTCCTATCCTTGCAG +
Preference number: 1 (lower is better)
Translates to: PVPANRGQGSCQPHI*SGSSSGAELFLSLQ
Trigger: CTGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTGTTTGCAGGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp ACGGCAAAGGCACAGACTAGAGGCGCCTCGGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGAACGAGGGGGCAGTTTCCAGAGACA +
Preference number: 1 (lower is better)
Translates to: TAKAQTRGASAPFLH*LGDSVRTRGQFPET
Trigger: TGTCTCTGGAAACTGCCCCCTCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCTGTGCCTTTGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp TGTCTGCTGGGGGCTGCGCAGACAGTCTCTGCACGTCCACCCATGTaGTCACTGAACCACAGTGACATGCCACTGACACACAGCAGGGAC +
Preference number: 1 (lower is better)
Translates to: CLLGAAQTVSARPPM*SLNHSDMPLTHSRD
Trigger: GTCCCTGCTGTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGCAGAGACTGTCTGCGCAGCCCCCAGCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp GACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGTGGCTaGGAAACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACA +
Preference number: 1 (lower is better)
Translates to: DTQQGHHGPRKGAGG*ETLSAPNASNGKGT
Trigger: TGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp GGGGAGTTGCCAGCCTCACATCTGCTCAGGGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGCT +
Preference number: 1 (lower is better)
Translates to: GELPASHLLRELIGR*AIPILAAASTSSTA
Trigger: AGCTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCAACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp GGATGCACGCAGAGGTCTCCCACTGAAATGTACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCA +
Preference number: 1 (lower is better)
Translates to: GCTQRSPTEMYWEWG*LLPRHGCEHQQDSA
Trigger: TGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGCGTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 90 bp CTCCATGGATGCACGCAGAGGTCTCCCACTGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGAC +
Preference number: 1 (lower is better)
Translates to: LHGCTQRSPTEMYWE*GCLLPRHGCEHQQD
Trigger: GTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGCGTGCATCCATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 90 bp CAAAGGCACAGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGG +
Preference number: 1 (lower is better)
Translates to: QRHRLEAPRHPSSIA*GILSERGGSFQRQR
Trigger: CCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCTGTGCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp AGATGTCTGCAAAACCGCCCTCCACCTCACACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTCCGAGGACACAGACATCTACAGCAT +
Preference number: 1 (lower is better)
Translates to: RCLQNRPPPHTARSL*QAELSLRGHRHLQH
Trigger: ATGCTGTAGATGTCTGTGTCCTCGGAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGTGTGAGGTGGAGGGCGGTTTTGCAGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp TTGCGTCTCCATGGATGCACGCAGAGGTCTCCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAG +
Preference number: 1 (lower is better)
Translates to: LRLHGCTQRSPTEMY*EWGCLLPRHGCEHQ
Trigger: CTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 90 bp CAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTaGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTC +
Preference number: 1 (lower is better)
Translates to: QESEVLLIHTWRHRI*NVHSHSSFPAPLRL
Trigger: GAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR TCA 90 bp AGAGATGGCTGGGAGATCAGACTCCAGTTGTCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAGAGGGCAGGGGAGTTGCCAGCCTCA +
Preference number: 1 (lower is better)
Translates to: RDGWEIRLQLSFLGL*PCACKQRAGELPAS
Trigger: TGAGGCTGGCAACTCCCCTGCCCTCTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGACAACTGGAGTCTGATCTCCCAGCCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp AGACCCAGCACAGCTCCAAGAGTGGGTGGTGGTGGAGACATCCCATaGTCGCCCTTGCAGAAGCCTAAGATGAGAACCAACTCCTCCTCA +
Preference number: 1 (lower is better)
Translates to: RPSTAPRVGGGGDIP*SPLQKPKMRTNSSS
Trigger: TGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCTTGGAGCTGTGCTGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp CTGCTTCAGACCTGGCCTGACTCCTGTCTCCAAATCTCTTGGGCCTaGGTGAGAGGGCCTCTCCCAAAAGGCAGAGAAAATGAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: LLQTWPDSCLQISWA*VRGPLPKGRENEAG
Trigger: GCCAGCTTCATTTTCTCTGCCTTTTGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp ACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTaGGTAGATAGGAGGGGCCTCCCTTCTCCTGCTTCAGACCTGGCC +
Preference number: 1 (lower is better)
Translates to: TWLEQAALFPKPNVN*VDRRGLPSPASDLA
Trigger: GGCCAGGTCTGAAGCAGGAGAAGGGAGGCCCCTCCTATCTACCCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp TCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCCACA +
Preference number: 1 (lower is better)
Translates to: SLRNSEVSDKKARCC*STRGDTGFGTCTPT
Trigger: TGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR TCA 90 bp TTCAGACCTGGCCTGACTCCTGTCTCCAAATCTCTTGGGCCTGGGTaGGAGGGCCTCTCCCAAAAGGCAGAGAAAATGAAGCTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: FRPGLTPVSKSLGPG*EGLSQKAEKMKLAA
Trigger: AGCTGCCAGCTTCATTTTCTCTGCCTTTTGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAGGAGTCAGGCCAGGTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp ACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTaGGTCTCCATGGATGCACGCAGAGGTCTCCCACTGAAATGTACT +
Preference number: 1 (lower is better)
Translates to: TGFGTCTPTVPSPPH*VSMDARRGLPLKCT
Trigger: AGTACATTTCAGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 90 bp ACCTGCTGTAGGACCCACCTGGCAGCAGTTCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTG +
Preference number: 1 (lower is better)
Translates to: TCCRTHLAAVLHQLV*LQGNRAVSKRLVTV
Trigger: CACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp GGTCACATGTGCTCACAAGATGTTGGGCTGGAGGGGTGGGGGTCATaGGGTTGGCCACACAGACTCATACCCACAAACACAGTTCTCTCA +
Preference number: 1 (lower is better)
Translates to: GHMCSQDVGLEGWGS*GWPHRLIPTNTVLS
Trigger: TGAGAGAACTGTGTTTGTGGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCACCCCTCCAGCCCAACATCTTGTGAGCACATGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp CTCTTGGGCCTGGGTGAGAGGGCCTCTCCCAAAAGGCAGAGAAAATaGAGCTGGCAGCTGAGTCACGGGCAGCTAATTGTTTCCAGAATC +
Preference number: 1 (lower is better)
Translates to: LLGLGERASPKRQRK*SWQLSHGQLIVSRI
Trigger: GATTCTGGAAACAATTAGCTGCCCGTGACTCAGCTGCCAGCTTCATTTTCTCTGCCTTTTGGGAGAGGCCCTCTCACCCAGGCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp TTGCAACAGCTTGGCTATTTGGGCCTCTCGTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAGATGGCTGGGAGATCAGACTCCAGT +
Preference number: 1 (lower is better)
Translates to: LQQLGYLGLSYLPSS*LLVTPEMAGRSDSS
Trigger: ACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp CACACGCTTGGCACTTTTAACAACTGCTCTTGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAGAACACCAGTTTCTCTCCAACCACA +
Preference number: 1 (lower is better)
Translates to: HTLGTFNNCSCWSCL*PSRAGQNTSFSPTT
Trigger: TGTGGTTGGAGAGAAACTGGTGTTCTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCAAGAGCAGTTGTTAAAAGTGCCAAGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp CCACTTGAAATCCATTTTCCTGGGTGGGCCCTGAGAGATGGAAACTaGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCTTC +
Preference number: 1 (lower is better)
Translates to: PLEIHFPGWALRDGN*AVHKGNCEGQAETF
Trigger: GAAGGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAAAATGGATTTCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp TTCTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTaGAGTCTCAGTCAACATCACCCTCCTAGGATGACTGGACTACAG +
Preference number: 1 (lower is better)
Translates to: FCQNEGAVSRDKGRA*SLSQHHPPRMTGLQ
Trigger: CTGTAGTCCAGTCATCCTAGGAGGGTGATGTTGACTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp CCTCGTGCTTCCCAGGGTGTCAATTCAATTGTAGCCACTCTGTCTTaGAACAGCTTGGCTATTTGGGCCTCTCGTATCTGCCATCCAGCT +
Preference number: 1 (lower is better)
Translates to: PRASQGVNSIVATLS*NSLAIWASRICHPA
Trigger: AGCTGGATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATTGAATTGACACCCTGGGAAGCACGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp GGACTACAGAACCACGAGCTTTACTTACAAGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: GLQNHELYLQEEGKA*LAHVARTSCAFPKA
Trigger: GGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCTTGTAAGTAAAGCTCGTGGTTCTGTAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp CTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACAGGTGCGTaGTCTGGGTTAGCTTCCCTGGCAGGGAAAATCAGAGACATAGTG +
Preference number: 1 (lower is better)
Translates to: LRTNYPAETLMSTGA*SGLASLAGKIRDIV
Trigger: CACTATGTCTCTGATTTTCCCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp CATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACAGGTaGGTGCTCTGGGTTAGCTTCCCTGGCAGGGAAAATCAGAGACAT +
Preference number: 1 (lower is better)
Translates to: HAQNELSCGNTHEHR*VLWVSFPGRENQRH
Trigger: ATGTCTCTGATTTTCCCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp AACGAATTATCCTGCGGAAACACTCATGAGCACAGGTGCGTGCTCTaGGTTAGCTTCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: NELSCGNTHEHRCVL*VSFPGRENQRHSAE
Trigger: CTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp GACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATTATCCTaGGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTC +
Preference number: 1 (lower is better)
Translates to: DRQSTLWYHAQNELS*GNTHEHRCVLWVSF
Trigger: GAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp ACGAGCTTTACTTACAAGAGGAAGGAAAAGCCTGCTTGGCACACGTaGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGG +
Preference number: 1 (lower is better)
Translates to: TSFTYKRKEKPAWHT*LEQAALFPKPNVNW
Trigger: CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCTTGTAAGTAAAGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp AGGCCAAACAGAGTCTGTCTGCTTAAAATGAAACTAGGTCATTTGTaGCCTGCTGTAGGACCCACCTGGCAGCAGTTCTTCATCAGCTGG +
Preference number: 1 (lower is better)
Translates to: RPNRVCLLKMKLGHL*PAVGPTWQQFFISW
Trigger: CCAGCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCTAGTTTCATTTTAAGCAGACAGACTCTGTTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp TTCCAGAATCTGCAGTCACCACTTAGTAGGGGTTCAGAGAGAAAGTaGAAGGGTGAGGGAATCATTTCCCCTTCTGGGTCCAAGTACGAC +
Preference number: 1 (lower is better)
Translates to: FQNLQSPLSRGSERK*KGEGIISPSGSKYD
Trigger: GTCGTACTTGGACCCAGAAGGGGAAATGATTCCCTCACCCTTTCACTTTCTCTCTGAACCCCTACTAAGTGGTGACTGCAGATTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp ACAAAGGGAGAGCGTGAAGTCTCAGTCAACATCACCCTCCTAGGATaGCTGGACTACAGAACCACGAGCTTTACTTACAAGAGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: TKGEREVSVNITLLG*LDYRTTSFTYKRKE
Trigger: TTCCTTCCTCTTGTAAGTAAAGCTCGTGGTTCTGTAGTCCAGTCATCCTAGGAGGGTGATGTTGACTGAGACTTCACGCTCTCCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 90 bp GGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTCAATTGTAGCCACTCTGTCTTGCAA +
Preference number: 1 (lower is better)
Translates to: GHRHLQHHYPYQVTS*FPGCQFNCSHSVLQ
Trigger: TTGCAAGACAGAGTGGCTACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 90 bp TTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTaGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAG +
Preference number: 1 (lower is better)
Translates to: LVSRWHLLTDRQSTL*YHAQNELSCGNTHE
Trigger: CTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 90 bp AGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTCAAGTCAGCCTCAACTGTTGTTTCA +
Preference number: 1 (lower is better)
Translates to: RDSYWRDKKSSLCFN*CFCLSVKSASTVVS
Trigger: TGAAACAACAGTTGAGGCTGACTTGACCGATAAGCAGAAACATCAGTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
3UTR CCA 90 bp AACACTGGCGCATTTCTTAAGAAAAATCCATTCAGAAAGATGCCATaGCCCTCCTGTACATATTTAGTAACTATACAGCATAAGACCGAG +
Preference number: 1 (lower is better)
Translates to: NTGAFLKKNPFRKMP*PSCTYLVTIQHKTE
Trigger: CTCGGTCTTATGCTGTATAGTTACTAAATATGTACAGGAGGGCCATGGCATCTTTCTGAATGGATTTTTCTTAAGAAATGCGCCAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 90 bp ATTTCCAGGAATTTATTGGAAACACAATACAAATTGGTTAGTAGATaGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCT +
Preference number: 1 (lower is better)
Translates to: ISRNLLETQYKLVSR*HLLTDRQSTLWYHA
Trigger: AGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATTTGTATTGTGTTTCCAATAAATTCCTGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCCTCAGTGGGAACCCTaGGGAGAACCCCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGPQWEP*GEPLPA
Trigger: GGCAGGCAGGGGTTCTCCTCAGGGTTCCCACTGAGG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGAGGGTGGGCAGGCGATaGCTGAGCCAGAGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGRVGRR*LSQRGR
Trigger: TCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCT...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGATGTCTGCTGGGGGCTaGGCAGACAGTCTCTGCACG +
Preference number: 2 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLMSAGG*ADSLCT
Trigger: CGTGCAGAGACTGTCTGCGCAGCCCCCAGCAGACAT...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCC +
Preference number: 2 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGATQHS*VANCDA
Trigger: GGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGTGGGGGTCATGGGGTTaGCCACACAGACTCATACCC +
Preference number: 2 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLWGSWG*PHRLIP
Trigger: GGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCA...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCCAAATCTCTTGGGCCTaGGTGAGAGGGCCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: SVAGPPVALAPGSGDASSQISWA*VRGPLP
Trigger: TGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTG...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCA +
Preference number: 2 (lower is better)
Translates to: SVAGPPVALAPGSGDASSELIGR*AIPILA
Trigger: TGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCACCCATGTGCTCACTaGACCACAGTGACATGCCAC +
Preference number: 2 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGHPCAH*TTVTCH
Trigger: GTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGA +
Preference number: 2 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGAPFLH*LGDSVR
Trigger: TCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGCCGCTGTTGCTGGGTaGGGCGCAGGGCGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRAAVAG*GAGRCR
Trigger: TCTGCAGCGCCCTGCGCCCCACCCAGCAACAGCGGC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCTACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGC +
Preference number: 2 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLYWEWG*LLPRHG
Trigger: GCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTA...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTG +
Preference number: 2 (lower is better)
Translates to: SVAGPPVALAPGSGDASSNPRDG*EIRLQL
Trigger: CAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTT...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGA +
Preference number: 2 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLPSSIA*GILSER
Trigger: TCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGG...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCCCTCAGAAAAGAAGCTaGGATGTCTGCAAAACCGCC +
Preference number: 2 (lower is better)
Translates to: SVAGPPVALAPGSGDASSPQKRS*DVCKTA
Trigger: GGCGGTTTTGCAGACATCTCAGCTTCTTTTCTGAGG...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 2 (lower is better)
Translates to: SVAGPPVALAPGSGDASSWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQSGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTAAGGGAGCGGGTGGCTaGGAAACCCTCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: KGGQAMTEPEGEIACRACKGAGG*ETLSAP
Trigger: TGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTT...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 2 (lower is better)
Translates to: LSERGGSFQRQRESVKSQGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: KGGQAMTEPEGEIACRACSIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAATGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: RLEAPRHPSSIAWGILSECWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 2 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERTARSL*QAELSL
Trigger: GAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGT...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGCCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGPTEMY*EWGCLL
Trigger: AAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGG...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGAGGGGTGGGGGTCATaGGGTTGGCCACACAGACTC +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGREGWGS*GWPHRL
Trigger: GAGTCTGTGTGGCCAACCCCATGACCCCCACCCCTC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAACTCCCAGGTCTTTGCTaGAGGGACCCCTCAGTGGGA +
Preference number: 2 (lower is better)
Translates to: RLEAPRHPSSIAWGILSELPGLC*RDPSVG
Trigger: TCCCACTGAGGGGTCCCTTCAGCAAAGACCTGGGAG...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTCACCCATGTGCTCACTaGACCACAGTGACATGCCAC +
Preference number: 2 (lower is better)
Translates to: KGGQAMTEPEGEIACRACHPCAH*TTVTCH
Trigger: GTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTG...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 2 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCGCCACCAAGGGCTCGTaGCGAGGGCAGGTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVATKGS*RGQVGN
Trigger: GTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGC...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGGGACTGTGACCCTGTaGCTGCAAACAGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRGTVTL*LQTEGR
Trigger: CCTGCCCTCTGTTTGCAGGCACAGGGTCACAGTCCC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGCACGTCCACCCATGTaGTCACTGAACCACAGTGAC +
Preference number: 2 (lower is better)
Translates to: KGGQAMTEPEGEIACRACARPPM*SLNHSD
Trigger: GTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGGAGGGGGAGATAGCCTaGAGAGCCTGTGTCCTCACC +
Preference number: 2 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWEGEIA*RACVLT
Trigger: GGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTC...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: RGSLSPSILSRSRSVTARPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGAAGAGTGGGTGGTGGTaGAGACATCCCATGCTCGCC +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERKSGWW*RHPMLA
Trigger: GGCGAGCATGGGATGTCTCCACCACCACCCACTCTT...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: RSVTARSLTRKRGAADPHSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGCAGAGGTCTCCCACTaGAATGTACTGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCAEVSH*NVLGVG
Trigger: CCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RLEAPRHPSSIAWGILSESIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPCWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCAGGGAAAGCTCAGTCTaGCACACAGCACGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVRESSV*HTAREF
Trigger: GAACTCACGTGCTGTGTGTCAGACTGAGCTTTCCCT...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409019.5
3UTR-3UTR CCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAEMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPSGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGCTGTAGGACCCACCTaGCAGCAGTTCTTCATCAGC +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERAVGPT*QQFFIS
Trigger: GCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGC...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGACCTGCTTGGCACACGTaGCTCGAACAAGCTGCGCTT +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRPAWHT*LEQAAL
Trigger: AAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACA +
Preference number: 2 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCKARCC*STRGDT
Trigger: TGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTT...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR TCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACA +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRKARCC*STRGDT
Trigger: TGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTT...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQTARSL*QAELSL
Trigger: GAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGA +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGREEGKA*LAHVAR
Trigger: TCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTC...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGA +
Preference number: 2 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEEEGKA*LAHVAR
Trigger: TCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGGAGGGGGAGATAGCCTaGAGAGCCTGTGTCCTCACC +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQEGEIA*RACVLT
Trigger: GGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTC...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LAAREQGSKQTACHSDTHSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCCGTGCCGAGGGCAGGTaGGAAACACGAAGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVRAEGR*ETRRAQ
Trigger: TTGGGCTCTTCGTGTTTCCCACCTGCCCTCGGCACG...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAATCCAAGAGTGGGTGGTaGTGGAGACATCCCATGCTC +
Preference number: 2 (lower is better)
Translates to: RLEAPRHPSSIAWGILSESKSGW*WRHPML
Trigger: GAGCATGGGATGTCTCCACCACCACCCACTCTTGGA...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTAAGGAAAAGCCTGCTTaGCACACGTGGCTCGAACAA +
Preference number: 2 (lower is better)
Translates to: KGGQAMTEPEGEIACRACKEKPA*HTWLEQ
Trigger: TTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTT...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGGTGGGCCCTGAGAGATaGAAACTGGGCTGTGCACAA +
Preference number: 2 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWVGPER*KLGCAQ
Trigger: TTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCAC...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 90 bp CACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACGCAGAGGTCTCCCACTGAAATGTAC +
Preference number: 2 (lower is better)
Translates to: HRIWNVHSHSSFPAP*RLHGCTQRSPTEMY
Trigger: GTACATTTCAGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CAA 90 bp ACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTaGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCT +
Preference number: 2 (lower is better)
Translates to: TRKRGAADPHVETQD*ERALPQFLPRPIAS
Trigger: AGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CAA 90 bp CACATCTGCTCAGGGAGCTCATCGGGCGCTGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTAGCACAGCTACTCAGCACAGCTGAG +
Preference number: 2 (lower is better)
Translates to: HICSGSSSGAELFLS*QLPAQVAQLLSTAE
Trigger: CTCAGCTGTGCTGAGTAGCTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTCCCTGAGCAGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 2 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR TCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCCTGACACACAGCACGTaGGTTCTTCACAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVLTHST*VLHSLR
Trigger: TCTGAGGCTGTGAAGAACTCACGTGCTGTGTGTCAG...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409019.5
3UTR-3UTR GCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTTTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 2 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR GCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATTTGCAGCAGCCCCACTaGCAAGTGGCCGCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: AGLAAREQGSKQTACHSDLQQPH*QVAAVA
Trigger: AGCAACAGCGGCCACTTGGCAGTGGGGCTGCTGCAA...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCTGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGC +
Preference number: 2 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETCQPHI*SGSSSG
Trigger: GCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCA...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTG +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRNPRDG*EIRLQL
Trigger: CAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTT...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCAAGGGAGCGGGTGGCTaGGAAACCCTCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETKGAGG*ETLSAP
Trigger: TGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTT...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGTGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGCWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCC +
Preference number: 2 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETATQHS*VANCDA
Trigger: GGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGC...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGGCCCCAGGCTCTGGTaGCGCGTCCTCCCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIGPRLW*RVLPWC
Trigger: GCACCAGGGGAGGACGCGTCACCAGAGCCTGGGGCC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGTGGGTTTCACTACTGTaGGGCACCTGCAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQWVSLL*GTCRTL
Trigger: CAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACCCA...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGATGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGAGCTCCAAGAGTGGGTaGTGGTGGAGACATCCCATG +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQSSKSG*WWRHPM
Trigger: CATGGGATGTCTCCACCACCACCCACTCTTGGAGCT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCTCCTGCTTCAGACCTaGCCTGACTCCTGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPLLLQT*PDSCLQ
Trigger: TTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAGGAG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCTCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAG +
Preference number: 2 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVSFLGL*PCACKQ
Trigger: CTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGA...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: RSVTARSLTRKRGAADPHTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 2 (lower is better)
Translates to: SDMPLTHSRDTMAPERERIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTAGGTCATTTGTGACCTaGTGTAGGACCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPRSFVT*CRTHLA
Trigger: TGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCT...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATGCCACCAAGGGCTCGTaGCGAGGGCAGGTGGGAAAC +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNATKGS*RGQVGN
Trigger: GTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGC...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: AGLAAREQGSKQTACHSDEMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 2 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGACTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 2 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGGACTTAGGACAGCAGTaGGGCATAAACACCAGGCTC +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQDLGQQ*GINTRL
Trigger: GAGCCTGGTGTTTATGCCCCACTGCTGTCCTAAGTC...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 90 bp ACAGCTCCAAGAGTGGGTGGTGGTGGAGACATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGAACCAACTCCTCCTCAGAAAAGAAG +
Preference number: 2 (lower is better)
Translates to: TAPRVGGGGDIPCSP*QKPKMRTNSSSEKK
Trigger: CTTCTTTTCTGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCTTGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAGGTTCAGAGAGAAAGTaGAAGGGTGAGGGAATCATT +
Preference number: 2 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRGSERK*KGEGII
Trigger: AATGATTCCCTCACCCTTTCACTTTCTCTCTGAACC...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACACTCAGCCCCCTGCTCTaGTCTGAGTGGCAGGGGACT +
Preference number: 2 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTLSPLL*SEWQGT
Trigger: AGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LAAREQGSKQTACHSDTHEMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATCCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: AGLAAREQGSKQTACHSDPTEMY*EWGCLL
Trigger: AAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGG...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 2 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 2 (lower is better)
Translates to: SVTARSLTRKRGAADPHVLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCA +
Preference number: 2 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETLHQLV*LQGNRA
Trigger: TGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAG...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGGCACAGCTCCAAGAGTaGGTGGTGGTGGAGACATCC +
Preference number: 2 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGAQLQE*VVVETS
Trigger: GGATGTCTCCACCACCACCCACTCTTGGAGCTGTGC...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGTCCCCCAGTGGCCTTaGCCCCAGGCTCTGGTGACG +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIVPQWP*PQALVT
Trigger: CGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGAC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 90 bp ACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTGGGCCTCTCGTATCTGCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: TSCFPGCQFNCSHSV*QQLGYLGLSYLPSS
Trigger: GCTGGATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATTGAATTGACACCCTGGGAAGCACGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTAAAAGGCAGAGAAAATaGAGCTGGCAGCTGAGTCAC +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPKRQRK*SWQLSH
Trigger: GTGACTCAGCTGCCAGCTTCATTTTCTCTGCCTTTT...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATTTCCTGGGTGGGCCCTaGGAGATGGAAACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNFLGGP*EMETGL
Trigger: CAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAA...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCATTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 2 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGATTGTTTCCAGAATCTaGAGTCACCACTTAGTAGGG +
Preference number: 2 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRIVSRI*SHHLVG
Trigger: CCCTACTAAGTGGTGACTGCAGATTCTGGAAACAAT...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACAGAGGGGGAGATAGCCTaGAGAGCCTGTGTCCTCACC +
Preference number: 2 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTEGEIA*RACVLT
Trigger: GGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTC...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCGCGTCCTCCCCTGGTaGCCAGCCAGTCTCAGGATG +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIRVLPW*PASLRM
Trigger: CATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTGTCTTGCAACAGCTTaGCTATTTGGGCCTCTCGTA +
Preference number: 2 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPCLATA*LFGPLV
Trigger: TACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGAGCTCCAAGAGTGGGTaGTGGTGGAGACATCCCATG +
Preference number: 2 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTSSKSG*WWRHPM
Trigger: CATGGGATGTCTCCACCACCACCCACTCTTGGAGCT...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGCTCCTGCTTCAGACCTaGCCTGACTCCTGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTLLLQT*PDSCLQ
Trigger: TTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAGGAG...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGGAGAAAGTGAAAGGGTaGGGGAATCATTTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWEKVKG*GNHFPF
Trigger: GAAGGGGAAATGATTCCCTCACCCTTTCACTTTCTC...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 2 (lower is better)
Translates to: LSERGGSFQRQRESVKSQIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATAGAGGGCAGGGGAGTTaGCAGCCTCACATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNRGQGS*QPHICS
Trigger: TGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCT...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 2 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGTTCAGAAAGATGCCATaGCCCTCCTGTACATATTTA +
Preference number: 2 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWFRKMP*PSCTYL
Trigger: TAAATATGTACAGGAGGGCCATGGCATCTTTCTGAA...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 90 bp TGTCAATTCAATTGTAGCCACTCTGTCTTGCAACAGCTTGGCTATTaGGGCCTCTCGTATCTGCCATCCAGCTGCCTCCTAGTAACCCCA +
Preference number: 2 (lower is better)
Translates to: CQFNCSHSVLQQLGY*GLSYLPSSCLLVTP
Trigger: TGGGGTTACTAGGAGGCAGCTGGATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATTGAATTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 90 bp CTACAGAACCACGAGCTTTACTTACAAGAGGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LQNHELYLQEEGKAC*AHVARTSCAFPKAK
Trigger: TTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCTTGTAAGTAAAGCTCGTGGTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACATTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 2 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTGGGACTGTGACCCTGTaGCTGCAAACAGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCGTVTL*LQTEGR
Trigger: CCTGCCCTCTGTTTGCAGGCACAGGGTCACAGTCCC...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGA +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNAPFLH*LGDSVR
Trigger: TCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGC...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCGTGCCGAGGGCAGGTaGGAAACACGAAGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIRAEGR*ETRRAQ
Trigger: TTGGGCTCTTCGTGTTTCCCACCTGCCCTCGGCACG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGAAGGAAAAGCCTGCTTaGCACACGTGGCTCGAACAA +
Preference number: 2 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGKEKPA*HTWLEQ
Trigger: TTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTT...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGAAGAAACATCCACGTaGTGCGGCACCTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIEETST*CGTSSQ
Trigger: CTGGGAGGAGGTGCCGCATCACGTGGATGTTTCTTC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCTCACTGAACCACAGTaGCATGCCACTGACACACAG +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNLTEPQ*HATDTQ
Trigger: CTGTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: LAAREQGSKQTACHSDTHTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACAAGGTCATTTGTGACCTaGTGTAGGACCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTRSFVT*CRTHLA
Trigger: TGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCT...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACATATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 2 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNPLSTK*FQRQRH
Trigger: GTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNPTEMY*EWGCLL
Trigger: AAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGTGTCTTGCAACAGCTTaGCTATTTGGGCCTCTCGTA +
Preference number: 2 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTCLATA*LFGPLV
Trigger: TACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACA...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR GCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 2 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGCTGTAGGACCCACCTaGCAGCAGTTCTTCATCAGC +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIAVGPT*QQFFIS
Trigger: GCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR TCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCTCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAG +
Preference number: 2 (lower is better)
Translates to: NWLVDGISLQTDNPHCGISFLGL*PCACKQ
Trigger: CTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGA...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 2 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTAACAGCTTGGCTATTTaGGCCTCTCGTATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCNSLAI*ASRICH
Trigger: ATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTT...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATTTCAGAAAGATGCCATaGCCCTCCTGTACATATTTA +
Preference number: 2 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNFRKMP*PSCTYL
Trigger: TAAATATGTACAGGAGGGCCATGGCATCTTTCTGAA...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCATTAGGGGTTACATTGTaGCACTACCTAAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSLGVTL*HYLKGK
Trigger: TTTACCTTTTAGGTAGTGCCACAATGTAACCCCTAA...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
3UTR-3UTR CCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATTAGGGGTTACATTGTaGCACTACCTAAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGLGVTL*HYLKGK
Trigger: TTTACCTTTTAGGTAGTGCCACAATGTAACCCCTAA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
3UTR CCA 72 bp CAGCAGCCCCACTGCCAAGTGGCCGCTGTTGCTGGGTaGGGCGCAGGGCGCTGCAGAAGGGAGGAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: QQPHCQVAAVAG*GAGRCRREEVE
Trigger: CTCCACCTCCTCCCTTCTGCAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 72 bp CCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTaGGTCGCCTGTCCCAGGCTCCCAGGGCAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: PCSALSGRGLTR*VACPRLPGQLL
Trigger: AAGCAGCTGCCCTGGGAGCCTGGGACAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGCAGAGGGCAGGGGAGTaGCCAGCCTCACATCTGCTC +
Preference number: 3 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLQRAGE*PASHLL
Trigger: GAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTG...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp CGAGCTGAGCGGACACATGCAGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACTGCCAAGTGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: RAERTHAGWQRL*ACSSPTAKWPL
Trigger: CAGCGGCCACTTGGCAGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCCTGCATGTGTCCGCTCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CAA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGTGTGCTCACAAGATGTaGGGCTGGAGGGGTGGGGGT +
Preference number: 3 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGCAHKM*GWRGGG
Trigger: ACCCCCACCCCTCCAGCCCAACATCTTGTGAGCACA...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CCCGGTGGGTCGCCTGTCCCAGGCTCCCAGGGCAGCTaGTTCCAACTGGGTTTCACTACTGTGAGGCACCTG +
Preference number: 3 (lower is better)
Translates to: PGGSPVPGSQGS*FQLGFTTVRHL
Trigger: CAGGTGCCTCACAGTAGTGAAACCCAGTTGGAAGCAGCTGCCCTGGGAGCCTGGGACAGGCGACCCACCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGGTCCCCCAGTGGCCTaGGCCCCAGGCTCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRGPPVA*APGSGD
Trigger: GTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACG +
Preference number: 3 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVSFPAP*RLHGCT
Trigger: CGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGA...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CAA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 3 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGA +
Preference number: 3 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLIPCSP*QKPKMR
Trigger: TCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGAT...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CCTTCCGGCGACACCCTCCAGTCGGCCCTCCTCTCTTaGGCACCTTTAAGAAGTGAAGGGTGGGCAGGCGAT +
Preference number: 3 (lower is better)
Translates to: PSGDTLQSALLS*APLRSEGWAGD
Trigger: ATCGCCTGCCCACCCTTCACTTCTTAAAGGTGCGCAAGAGAGGAGGGCCGACTGGAGGGTGTCGCCGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp TGGGGCATAAACACCAGGCTCAGACATGACACCGAGTaGACTGAGGCCACGCACAGCCCCACCTGCTTGCCC +
Preference number: 3 (lower is better)
Translates to: WGINTRLRHDTE*TEATHSPTCLP
Trigger: GGGCAAGCAGGTGGGGCTGTGCGTGGCCTCAGTGCACTCGGTGTCATGTCTGAGCCTGGTGTTTATGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp ACTGTGATGCCACCAAGGGCTCGTGCCGAGGGCAGGTaGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: TVMPPRARAEGR*ETRRAQAKGAG
Trigger: GCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGCATCACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGGACAGGGAAATACCTaGAACCTCATAAACACTGGC +
Preference number: 3 (lower is better)
Translates to: SVAGPPVALAPGSGDASSGQGNT*NLINTG
Trigger: GCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CAAAACCGCCCTCCACCTCACACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTCCGAGGACACAGACAT +
Preference number: 3 (lower is better)
Translates to: QNRPPPHTARSL*QAELSLRGHRH
Trigger: ATGTCTGTGTCCTCGGAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGTGTGAGGTGGAGGGCGGTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp GCACAGACTAGAGGCGCCTCGGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGAACGAGGGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: AQTRGASAPFLH*LGDSVRTRGQF
Trigger: AAACTGCCCCCTCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp GGGAGCGGGTGGCTGGGAAACCCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCACAGACTAGAGGCGCCT +
Preference number: 3 (lower is better)
Translates to: GSGWLGNPLSTK*FQRQRHRLEAP
Trigger: AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp CAAGCCAAGACCCAGCACAGCTCCAAGAGTGGGTGGTaGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCC +
Preference number: 3 (lower is better)
Translates to: QAKTQHSSKSGW*WRHPMLALAEA
Trigger: GGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCTTGGAGCTGTGCTGGGTCTTGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGAGGGGGCAGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: RLEAPRHPSSIA*GILSERGGSFQ
Trigger: CTGGAAACTGCCCCCTCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp CCTCCACCTCCCCTCGCCAGGGACTTAGGACAGCAGTaGGGCATAAACACCAGGCTCAGACATGACACCGAG +
Preference number: 3 (lower is better)
Translates to: PPPPLARDLGQQ*GINTRLRHDTE
Trigger: CTCGGTGTCATGTCTGAGCCTGGTGTTTATGCCCCACTGCTGTCCTAAGTCCCTGGCGAGGGGAGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp GCTGCCAGCACAAGTAGCACAGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCCACCAAGGGCTCGTGC +
Preference number: 3 (lower is better)
Translates to: AASTSSTATQHS*VANCDATKGSC
Trigger: GCACGAGCCCTTGGTGGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGCTGTGCTACTTGTGCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp CGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCCTCTGTAGTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: RTGIPCMAWRDT*LLTRGSSVVGL
Trigger: TAGCCCAACTACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
3UTR GCA 72 bp GCAAACAGAGGGCAGGGGAGTTGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGCGCTGAGCTATTCCTA +
Preference number: 3 (lower is better)
Translates to: ANRGQGSCQPHI*SGSSSGAELFL
Trigger: TAGGAATAGCTCAGCGCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp GGGGCTGCGCAGACAGTCTCTGCACGTCCACCCATGTaGTCACTGAACCACAGTGACATGCCACTGACACAC +
Preference number: 3 (lower is better)
Translates to: GAAQTVSARPPM*SLNHSDMPLTH
Trigger: GTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGCAGAGACTGTCTGCGCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp GAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTaGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCA +
Preference number: 3 (lower is better)
Translates to: EVLLIHTWRHRI*NVHSHSSFPAP
Trigger: TGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 72 bp CCAGCACAAGTAGCACAGCTACTCAGCACAGCTGAGTaGCCAACTGTGATGCCACCAAGGGCTCGTGCCGAG +
Preference number: 3 (lower is better)
Translates to: PAQVAQLLSTAE*PTVMPPRARAE
Trigger: CTCGGCACGAGCCCTTGGTGGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGCTGTGCTACTTGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGCTGTCTCCAAATCTCTaGGGCCTGGGTGAGAGGGCC +
Preference number: 3 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQLSPNL*GLGERA
Trigger: GGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAG...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACA +
Preference number: 3 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEEGKAC*AHVART
Trigger: TGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp CCAGCCTCACATCTGCTCAGGGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCAGCTGCCAGCACAAGT +
Preference number: 3 (lower is better)
Translates to: PASHLLRELIGR*AIPILAAASTS
Trigger: ACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp GCACCTTTAAGAAGTGAAGGGTGGGCAGGCGATGACTaGGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGT +
Preference number: 3 (lower is better)
Translates to: APLRSEGWAGDD*ARGGDSLQSLC
Trigger: ACACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTTCACTTCTTAAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CAGAGGTCTCCCACTGAAATGTACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGCTGTGAACATCAGCAG +
Preference number: 3 (lower is better)
Translates to: QRSPTEMYWEWG*LLPRHGCEHQQ
Trigger: CTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGGAGACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CAA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 3 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CCA 72 bp TGCTCACAAGATGTTGGGCTGGAGGGGTGGGGGTCATaGGGTTGGCCACACAGACTCATACCCACAAACACA +
Preference number: 3 (lower is better)
Translates to: CSQDVGLEGWGS*GWPHRLIPTNT
Trigger: TGTGTTTGTGGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCACCCCTCCAGCCCAACATCTTGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGTCTTCATCAGCTGGTTaGGCTGCAAGGGAACAGGGC +
Preference number: 3 (lower is better)
Translates to: LSERGGSFQRQRESVKSQSSSAG*AAREQG
Trigger: GCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGA...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp ACAGCTCCAAGAGTGGGTGGTGGTGGAGACATCCCATaGTCGCCCTTGCAGAAGCCTAAGATGAGAACCAAC +
Preference number: 3 (lower is better)
Translates to: TAPRVGGGGDIP*SPLQKPKMRTN
Trigger: GTTGGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCTTGGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp AGGACCCACCTGGCAGCAGTTCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTT +
Preference number: 3 (lower is better)
Translates to: RTHLAAVLHQLV*LQGNRAVSKRL
Trigger: AAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGAACTGCTGCCAGGTGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp GCCATCCAGCTGCCTCCTAGTAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTGTCTTTCTTGGGACTG +
Preference number: 3 (lower is better)
Translates to: AIQLPPSNPRDG*EIRLQLSFLGL
Trigger: CAGTCCCAAGAAAGACAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTTACTAGGAGGCAGCTGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp ATCCATTTTCCTGGGTGGGCCCTGAGAGATGGAAACTaGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCT +
Preference number: 3 (lower is better)
Translates to: IHFPGWALRDGN*AVHKGNCEGQA
Trigger: AGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAAAATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 3 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGA +
Preference number: 3 (lower is better)
Translates to: LSERGGSFQRQRESVKSQIPCSP*QKPKMR
Trigger: TCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGAT...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGCTGTCTCCAAATCTCTaGGGCCTGGGTGAGAGGGCC +
Preference number: 3 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGLSPNL*GLGERA
Trigger: GGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAG...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTA +
Preference number: 3 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVELFLS*QLPAQV
Trigger: TACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTC...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp AACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTaGAGTCTCAGTCAACATCACCCTCCTAGGATGACT +
Preference number: 3 (lower is better)
Translates to: NEGAVSRDKGRA*SLSQHHPPRMT
Trigger: AGTCATCCTAGGAGGGTGATGTTGACTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp GGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTaGGCTTTTCCCAAAGCCAAATGTCAACTGGGTAGA +
Preference number: 3 (lower is better)
Translates to: GKACLAHVARTS*AFPKAKCQLGR
Trigger: TCTACCCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp GAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTaGGTAGATAGGAGGGGCCTCCCTTCTCCTGCTTCA +
Preference number: 3 (lower is better)
Translates to: EQAALFPKPNVN*VDRRGLPSPAS
Trigger: TGAAGCAGGAGAAGGGAGGCCCCTCCTATCTACCCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTG +
Preference number: 3 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVCSHSV*QQLGYL
Trigger: CAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACA...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACACCTCCTCCCAGGTCTTaGCTGAAGGGACCCCTCAGT +
Preference number: 3 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTPPPRS*LKGPLS
Trigger: ACTGAGGGGTCCCTTCAGCAAAGACCTGGGAGGAGG...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACA +
Preference number: 3 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTEGKAC*AHVART
Trigger: TGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTC...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp AATTATCCTGCGGAAACACTCATGAGCACAGGTGCGTaGTCTGGGTTAGCTTCCCTGGCAGGGAAAATCAGA +
Preference number: 3 (lower is better)
Translates to: NYPAETLMSTGA*SGLASLAGKIR
Trigger: TCTGATTTTCCCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp AACGAATTATCCTGCGGAAACACTCATGAGCACAGGTaGGTGCTCTGGGTTAGCTTCCCTGGCAGGGAAAAT +
Preference number: 3 (lower is better)
Translates to: NELSCGNTHEHR*VLWVSFPGREN
Trigger: ATTTTCCCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp TCCACACTGTGGTATCATGCTCAGAACGAATTATCCTaGGGAAACACTCATGAGCACAGGTGCGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: STLWYHAQNELS*GNTHEHRCVLW
Trigger: CCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 3 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQTVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 3 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGTVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CAA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 3 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp TCCCAGGGTGTCAATTCAATTGTAGCCACTCTGTCTTaGAACAGCTTGGCTATTTGGGCCTCTCGTATCTGC +
Preference number: 3 (lower is better)
Translates to: SQGVNSIVATLS*NSLAIWASRIC
Trigger: GCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATTGAATTGACACCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 3 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDTVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR TCA 72 bp GAGCGTGAAGTCTCAGTCAACATCACCCTCCTAGGATaGCTGGACTACAGAACCACGAGCTTTACTTACAAG +
Preference number: 3 (lower is better)
Translates to: EREVSVNITLLG*LDYRTTSFTYK
Trigger: CTTGTAAGTAAAGCTCGTGGTTCTGTAGTCCAGTCATCCTAGGAGGGTGATGTTGACTGAGACTTCACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CAGCTGAGTCACGGGCAGCTAATTGTTTCCAGAATCTaGAGTCACCACTTAGTAGGGGTTCAGAGAGAAAGT +
Preference number: 3 (lower is better)
Translates to: QLSHGQLIVSRI*SHHLVGVQRES
Trigger: ACTTTCTCTCTGAACCCCTACTAAGTGGTGACTGCAGATTCTGGAAACAATTAGCTGCCCGTGACTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR-3UTR CAA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAAACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 3 (lower is better)
Translates to: LTRKRGAADPHVETQDLETVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR-3UTR CAA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTG +
Preference number: 3 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSCSHSV*QQLGYL
Trigger: CAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACA...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp AGAGTCTGTCTGCTTAAAATGAAACTAGGTCATTTGTaGCCTGCTGTAGGACCCACCTGGCAGCAGTTCTTC +
Preference number: 3 (lower is better)
Translates to: RVCLLKMKLGHL*PAVGPTWQQFF
Trigger: GAAGAACTGCTGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCTAGTTTCATTTTAAGCAGACAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CCA 72 bp AGATGGCATCTCCTTACAGACAGACAATCCACACTGTaGTATCATGCTCAGAACGAATTATCCTGCGGAAAC +
Preference number: 3 (lower is better)
Translates to: RWHLLTDRQSTL*YHAQNELSCGN
Trigger: GTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR GCA 72 bp CATCTACAGCATCATTATCCTTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTCAATTGTAGCCACTCT +
Preference number: 3 (lower is better)
Translates to: HLQHHYPYQVTS*FPGCQFNCSHS
Trigger: AGAGTGGCTACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATGCTGTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR TCA 72 bp TACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTCAAGTCAGCCTCAACT +
Preference number: 3 (lower is better)
Translates to: YWRDKKSSLCFN*CFCLSVKSAST
Trigger: AGTTGAGGCTGACTTGACCGATAAGCAGAAACATCAGTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
3UTR TCA 72 bp CCTGATATGTGTTGCGGGCAGAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATGTTTCAACTGATGTTT +
Preference number: 3 (lower is better)
Translates to: PDMCCGQRFILA*QKEFPMFQLMF
Trigger: AAACATCAGTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACATATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGGCCCCAGGCTCTGGTaGCGCGTCCTCCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSGPRLW*RVLPWC
Trigger: GCACCAGGGGAGGACGCGTCACCAGAGCCTGGGGCC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCGCTCGGAGGGCCGGTaGTGCAGCCGGGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGRSEGR*CSRVRG
Trigger: ACCCCTGACCCGGCTGCAGCACCGGCCCTCCGAGCG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGGCCACCAAGGGCTCGTaGCGAGGGCAGGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLATKGS*RGQVGN
Trigger: GTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGC...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGACGCACAGCCCCACCTaGTTGCCCTCAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGTHSPT*LPSAPC
Trigger: GCAGGGGGCTGAGGGCAAGCAGGTGGGGCTGTGCGT...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGCACCTGCAGGACTCTaGAGGCCAAGAGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSAPAGL*RPRGGE
Trigger: CTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCGCCGCTGTTGCTGGGTaGGGCGCAGGGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVAAVAG*GAGRCR
Trigger: TCTGCAGCGCCCTGCGCCCCACCCAGCAACAGCGGC...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPSGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGSIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSSIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGGCCCCAGGCTCTGGTaGCGCGTCCTCCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEGPRLW*RVLPWC
Trigger: GCACCAGGGGAGGACGCGTCACCAGAGCCTGGGGCC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGCTGCGGAAACACTCATaGGCACAGGTGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLLRKHS*AQVRAL
Trigger: CAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAG...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARSGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGAAGAGTGGGTGGTGGTaGAGACATCCCATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGKSGWW*RHPMLA
Trigger: GGCGAGCATGGGATGTCTCCACCACCACCCACTCTT...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCGTCCCCCAGTGGCCTTaGCCCCAGGCTCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPVPQWP*PQALVT
Trigger: CGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGAC...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACA +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGKARCC*STRGDT
Trigger: TGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTT...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGELIGR*AIPILA
Trigger: TGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGTARSL*QAELSL
Trigger: GAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGT...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGACGCACAGCCCCACCTaGTTGCCCTCAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARTHSPT*LPSAPC
Trigger: GCAGGGGGCTGAGGGCAAGCAGGTGGGGCTGTGCGT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGTCCAAGAGTGGGTGGTaGTGGAGACATCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLSKSGW*WRHPML
Trigger: GAGCATGGGATGTCTCCACCACCACCCACTCTTGGA...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGAGGGTGGGCAGGCGATaGCTGAGCCAGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQRVGRR*LSQRGR
Trigger: TCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCT...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCGGCCCCAGGCTCTGGTaGCGCGTCCTCCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVGPRLW*RVLPWC
Trigger: GCACCAGGGGAGGACGCGTCACCAGAGCCTGGGGCC...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCGGAGGGCCGGTGCTaGAGCCGGGTCAGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHSEGRC*SRVRGA
Trigger: CGCACCCCTGACCCGGCTGCAGCACCGGCCCTCCGA...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR GCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCGCGTCCTCCCCTGGTaGCCAGCCAGTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARRVLPW*PASLRM
Trigger: CATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCGCCTCCGGCGGGCTaGGCTGCCGGTGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGSPPAG*AAGVGC
Trigger: ACACCCGACACCGGCAGCCCAGCCCGCCGGAGGCGA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCATCCGCTTGGTAGTTaGGGTTTGCAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGHPLGS*GLQAWC
Trigger: ACACCAAGCCTGCAAACCCCAACTACCAAGCGGATG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGCCGCTGTTGCTGGGTaGGGCGCAGGGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGAAVAG*GAGRCR
Trigger: TCTGCAGCGCCCTGCGCCCCACCCAGCAACAGCGGC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGASGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGACAGGTCCACAGTGTaGCAGGTCCCCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACDRSTV*QVPQWP
Trigger: AGGCCACTGGGGGACCTGCCACACTGTGGACCTGTC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCCTGACACACAGCACGTaGGTTCATCCAGACCATTGT +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSLTHST*VHPDHC
Trigger: ACAATGGTCTGGATGAACTCACGTGCTGTGTGTCAG...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGELIGR*AIPILA
Trigger: TGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTC...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGTGCAGAAGCCTAAGATaGGAACCAACTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLCRSLR*EPTPPQ
Trigger: CTGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCA...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGACAGTGACATGCCACTaGCACACAGCAGGGACACCA +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGTVTCH*HTAGTP
Trigger: TGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACTGT...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTCGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCTCCGGCGGGCTGGGCTaGCGGTGTCGGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVSGGLG*RCRVSG
Trigger: ACCTGACACCCGACACCGGCAGCCCAGCCCGCCGGA...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCGAGGGGGAGATAGCCTaGAGAGCCTGTGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLEGEIA*RACVLT
Trigger: GGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTC...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAACGCGTCCTCCCCTGGTaGCCAGCCAGTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSERVLPW*PASLRM
Trigger: CATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCG...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTACGCACAGCCCCACCTaGTTGCCCTCAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGATHSPT*LPSAPC
Trigger: GCAGGGGGCTGAGGGCAAGCAGGTGGGGCTGTGCGT...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGTGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGCNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAAGTGGCCGCTGTTGCTaGGTGGGGCGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGSGRCC*VGRRAL
Trigger: CAGCGCCCTGCGCCCCACCCAGCAACAGCGGCCACT...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGAGGGGTGGGGGTCATaGGGTTGGCCACACAGACTC +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNEGWGS*GWPHRL
Trigger: GAGTCTGTGTGGCCAACCCCATGACCCCCACCCCTC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCAAGGGAGCGGGTGGCTaGGAAACCCTCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLKGAGG*ETLSAP
Trigger: TGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTT...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGCAGGGGCATGTCTGCTaGGGGCTGCGCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERQGHVC*GLRRQS
Trigger: AGACTGTCTGCGCAGCCCCCAGCAGACATGCCCCTG...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGGTGGGCCCTGAGAGATaGAAACTGGGCTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGVGPER*KLGCAQ
Trigger: TTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCAC...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAGACAGGTCCACAGTGTaGCAGGTCCCCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDADRSTV*QVPQWP
Trigger: AGGCCACTGGGGGACCTGCCACACTGTGGACCTGTC...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCCTCAGTGGGAACCCTaGGGAGAACCCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRPQWEP*GEPLPA
Trigger: GGCAGGCAGGGGTTCTCCTCAGGGTTCCCACTGAGG...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGAAAAGGCAGAGAAAATaGAGCTGGCAGCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLKRQRK*SWQLSH
Trigger: GTGACTCAGCTGCCAGCTTCATTTTCTCTGCCTTTT...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGCTCACTGAACCACAGTaGCATGCCACTGACACACAG +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGLTEPQ*HATDTQ
Trigger: CTGTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAG...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTGTGCCTTCCTCGCGGTaGGATTCAAGGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRVPSSR*DSRGRP
Trigger: AGGCCGGCCCCTTGAATCTCACCGCGAGGAAGGCAC...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGTCCCCTGATATGTGTTaGGGGCAGAGATTCATACTG +
Preference number: 4 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLSPDMC*GQRFIL
Trigger: CAGTATGAATCTCTGCCCGCAACACATATCAGGGGA...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGACGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACCGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SVSDWHSLHGLAGHVTSNKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...GTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACCAGCCGGGTCAGGGGTaGGCGGGGGAAATCAAGATA +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNQPGQG*AGEIKI
Trigger: TATCTTGATTTCCCCCGCGCACCCCTGACCCGGCTG...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGACGGGGTAGATCGCTCTaGGGAGCCTTCACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGRGRSL*GAFTGL
Trigger: GAGCCCCGTGAAGGCTCCGCAGAGCGATCTACCCCG...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR GCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGGCACTTTTAACAACTaGTCTTGCTGGAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGGTFNN*SCWSCL
Trigger: CAGACAGCTCCAGCAAGAGCAGTTGTTAAAAGTGCC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCAGGATGGGGGCGGCTTaGTGTTGTTGTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVRMGAA*CCCSPP
Trigger: AGGTGGGGAACAACAACAGCAAGCCGCCCCCATCCT...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTLAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTGGGGGTCATGGGGTTaGCCACACAGACTCATACCC +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVWGSWG*PHRLIP
Trigger: GGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCA...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGTCCCCCAGTGGCCTTaGCCCCAGGCTCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQVPQWP*PQALVT
Trigger: CGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGAC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGACTGCTCTGCTCTGAGTaGCAGGGGACTGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRLLCSE*QGTDPV
Trigger: CACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAG...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 72 bp TGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACGCAGAGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: WNVHSHSSFPAP*RLHGCTQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
3UTR CAA 72 bp CGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTaGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGAADPHVETQD*ERALPQFLPRP
Trigger: GGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWSQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGCAGAGGTCTCCCACTaGAATGTACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNAEVSH*NVLGVG
Trigger: CCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARSIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGGAAGAAACATCCACGTaGTGCGGCACCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTAREETST*CGTSSQ
Trigger: CTGGGAGGAGGTGCCGCATCACGTGGATGTTTCTTC...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTTGGGTTTCACTACTGTaGGGCACCTGCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACWVSLL*GTCRTL
Trigger: CAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACCCA...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGCTGCGGAAACACTCATaGGCACAGGTGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERLRKHS*AQVRAL
Trigger: CAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAG...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTTGCAGCAGCCCCACTaGCAAGTGGCCGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVLQQPH*QVAAVA
Trigger: AGCAACAGCGGCCACTTGGCAGTGGGGCTGCTGCAA...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACGCCACCAAGGGCTCGTaGCGAGGGCAGGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHATKGS*RGQVGN
Trigger: GTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGC...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGTGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGC +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRCQPHI*SGSSSG
Trigger: GCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCA...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAAGAGGGCAGGGGAGTTaGCAGCCTCACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDARGQGS*QPHICS
Trigger: TGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCT...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGGGACTGTGACCCTGTaGCTGCAAACAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCGTVTL*LQTEGR
Trigger: CCTGCCCTCTGTTTGCAGGCACAGGGTCACAGTCCC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGTGCGCAGACAGTCTCTaGACGTCCACCCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQCADSL*TSTHVL
Trigger: GAGCACATGGGTGGACGTGCAGAGACTGTCTGCGCA...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGATGTCTGCTGGGGGCTaGGCAGACAGTCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWMSAGG*ADSLCT
Trigger: CGTGCAGAGACTGTCTGCGCAGCCCCCAGCAGACAT...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGATGTCTGCTGGGGGCTaGGCAGACAGTCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRMSAGG*ADSLCT
Trigger: CGTGCAGAGACTGTCTGCGCAGCCCCCAGCAGACAT...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGTCCCCACCTCTGGGTTaGCCCTCACTCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQSPPLG*PSLPCF
Trigger: AAAACAGGGGAGTGAGGGGCAACCCAGAGGTGGGGA...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGAGACATGACACCGAGTaGACTGAGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARRHDTE*TEATHS
Trigger: GCTGTGCGTGGCCTCAGTGCACTCGGTGTCATGTCT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGCAGAACGAATTATCCTaGGGAAACACTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGQNELS*GNTHEH
Trigger: GTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTG...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCACAGCCTCAGAGCATaGCAAGGAAGGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQHSLRA*QGRAAG
Trigger: TCCTGCAGCCCTTCCTTGGCATGCTCTGAGGCTGTG...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTCTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGALAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVEMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGAGGGGTGGGGGTCATaGGGTTGGCCACACAGACTC +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAEGWGS*GWPHRL
Trigger: GAGTCTGTGTGGCCAACCCCATGACCCCCACCCCTC...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCCGTGCCGAGGGCAGGTaGGAAACACGAAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCRAEGR*ETRRAQ
Trigger: TTGGGCTCTTCGTGTTTCCCACCTGCCCTCGGCACG...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCAAGAGTGGGTGGTaGTGGAGACATCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVSKSGW*WRHPML
Trigger: GAGCATGGGATGTCTCCACCACCACCCACTCTTGGA...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACCAAATCTCTTGGGCCTaGGTGAGAGGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNQISWA*VRGPLP
Trigger: TGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTG...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGAAGCCAAATGTCAACTaGGTAGATAGGAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGKPNVN*VDRRGL
Trigger: GAGGCCCCTCCTATCTACCCAGTTGACATTTGGCTT...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCAAGGGAGCGGGTGGCTaGGAAACCCTCTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCKGAGG*ETLSAP
Trigger: TGGTGCTGAGAGGGTTTCCCAGCCACCCGCTCCCTT...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGACAGGGGCATGTCTGCTaGGGGCTGCGCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGQGHVC*GLRRQS
Trigger: AGACTGTCTGCGCAGCCCCCAGCAGACATGCCCCTG...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATGTCCCCCAGTGGCCTTaGCCCCAGGCTCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: AGLAAREQGSKQTACHSDVPQWP*PQALVT
Trigger: CGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGAC...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCGCACCTGCAGGACTCTaGAGGCCAAGAGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSAPAGL*RPRGGE
Trigger: CTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGC...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGTTCAAGGGGCCGGCCTaGAGCCTGCAGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQFKGPA*SLQALG
Trigger: CCCTAGAGCCTGCAGGCTCCAGGCCGGCCCCTTGAA...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGGCTGTTTTTGCCGGTaGCAAGGCGTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHGCFCR*QGVPPQ
Trigger: CTGGGGAGGAACGCCTTGTCACCGGCAAAAACAGCC...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR TCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTTCCCAGGCACGGCTGTaGACATCAGCAGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGASQARL*TSAGQC
Trigger: GCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGA...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGGGTGGCAGCGGCTCTaGGCTTGCAGCAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHGWQRL*ACSSPT
Trigger: AGTGGGGCTGCTGCAAGCTCAGAGCCGCTGCCACCC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGCWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEATQHS*VANCDA
Trigger: GGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRATQHS*VANCDA
Trigger: GGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGCTACTCAGCACAGCTaGGTGGCCAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCATQHS*VANCDA
Trigger: GGCATCACAGTTGGCCACTCAGCTGTGCTGAGTAGC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATCCTCAGTGGGAACCCTaGGGAGAACCCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGLAAREQGSKQTACHSDPQWEP*GEPLPA
Trigger: GGCAGGCAGGGGTTCTCCTCAGGGTTCCCACTGAGG...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACTTCCTGGGTGGGCCCTaGGAGATGGAAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHFLGGP*EMETGL
Trigger: CAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAA...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGACGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCTTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPYWEWG*LLPRHG
Trigger: GCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACTTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCAGGTCATTTGTGACCTaGTGTAGGACCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPRSFVT*CRTHLA
Trigger: TGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGCQPHI*SGSSSG
Trigger: GCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCA...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCGGTGGAGACATCCCATaGTCGCCCTTGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVGGDIP*SPLQKP
Trigger: AGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACC...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGGTGGAGACATCCCATaGTCGCCCTTGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCGGDIP*SPLQKP
Trigger: AGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTCCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACPLSTK*FQRQRH
Trigger: GTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGG...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGCTCAGCCCCCTGCTCTaGTCTGAGTGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQLSPLL*SEWQGT
Trigger: AGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACCTCAGCCCCCTGCTCTaGTCTGAGTGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHLSPLL*SEWQGT
Trigger: AGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGTTGCCCTCAGCCCCCTaGTCTGCTCTGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVLPSAP*SALSGR
Trigger: CCTGCCACTCAGAGCAGAGCAGGGGGCTGAGGGCAA...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGTTGCCCTCAGCCCCCTaGTCTGCTCTGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQLPSAP*SALSGR
Trigger: CCTGCCACTCAGAGCAGAGCAGGGGGCTGAGGGCAA...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGTTGCCCTCAGCCCCCTaGTCTGCTCTGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQLPSAP*SALSGR
Trigger: CCTGCCACTCAGAGCAGAGCAGGGGGCTGAGGGCAA...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGAGACATGACACCGAGTaGACTGAGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRRHDTE*TEATHS
Trigger: GCTGTGCGTGGCCTCAGTGCACTCGGTGTCATGTCT...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTTGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSCNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGCTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQLAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPEREREMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCTGGGGGTCATGGGGTTaGCCACACAGACTCATACCC +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCWGSWG*PHRLIP
Trigger: GGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCA...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGCACAGCTCCAAGAGTaGGTGGTGGTGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCAQLQE*VVVETS
Trigger: GGATGTCTCCACCACCACCCACTCTTGGAGCTGTGC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACCTCCTGCTTCAGACCTaGCCTGACTCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNLLLQT*PDSCLQ
Trigger: TTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAGGAG...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACPSSIA*GILSER
Trigger: TCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGG...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGTGGGCCCTGAGAGATaGAAACTGGGCTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERVGPER*KLGCAQ
Trigger: TTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCAC...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTGACAGGTCCACAGTGTaGCAGGTCCCCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPDRSTV*QVPQWP
Trigger: AGGCCACTGGGGGACCTGCCACACTGTGGACCTGTC...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGACTTAGGACAGCAGTaGGGCATAAACACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACDLGQQ*GINTRL
Trigger: GAGCCTGGTGTTTATGCCCCACTGCTGTCCTAAGTC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGACCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCCCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACCCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SVSDWHSLHGLAGHVTSNPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...GTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTGCAGAGGTCTCCCACTaGAATGTACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRAEVSH*NVLGVG
Trigger: CCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGC...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACA +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEKARCC*STRGDT
Trigger: TGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTT...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGTCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQSFLGL*PCACKQ
Trigger: CTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGA...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCTCAGAAAAGAAGCTaGGATGTCTGCAAAACCGCC +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLPQKRS*DVCKTA
Trigger: GGCGGTTTTGCAGACATCTCAGCTTCTTTTCTGAGG...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCTCCCAGGTCTTTGCTaGAGGGACCCCTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPLPGLC*RDPSVG
Trigger: TCCCACTGAGGGGTCCCTTCAGCAAAGACCTGGGAG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGCTCCCAGGTCTTTGCTaGAGGGACCCCTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQLPGLC*RDPSVG
Trigger: TCCCACTGAGGGGTCCCTTCAGCAAAGACCTGGGAG...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGACAGTGACATGCCACTaGCACACAGCAGGGACACCA +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRTVTCH*HTAGTP
Trigger: TGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACTGT...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTTCCTGGGTGGGCCCTaGGAGATGGAAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHFLGGP*EMETGL
Trigger: CAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAA...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGTGGGTTTCACTACTGTaGGGCACCTGCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRWVSLL*GTCRTL
Trigger: CAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACCCA...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTCTGCGGAAACACTCATaGGCACAGGTGCGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGALRKHS*AQVRAL
Trigger: CAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCAG...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCTGACACACAGCACGTaGGTTCTTCACAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARLTHST*VLHSLR
Trigger: TCTGAGGCTGTGAAGAACTCACGTGCTGTGTGTCAG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409019.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTTTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGTTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCTTGCAGCAGCCCCACTaGCAAGTGGCCGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSLQQPH*QVAAVA
Trigger: AGCAACAGCGGCCACTTGGCAGTGGGGCTGCTGCAA...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTTGCAGCAGCCCCACTaGCAAGTGGCCGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPLQQPH*QVAAVA
Trigger: AGCAACAGCGGCCACTTGGCAGTGGGGCTGCTGCAA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGGCCTAGGTCACATGTaGTCACAAGATGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNGLGHM*SQDVGL
Trigger: CAGCCCAACATCTTGTGAGCACATGTGACCTAGGCC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGGGCCTAGGTCACATGTaGTCACAAGATGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARGLGHM*SQDVGL
Trigger: CAGCCCAACATCTTGTGAGCACATGTGACCTAGGCC...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGGGGACTGTGACCCTGTaGCTGCAAACAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQGTVTL*LQTEGR
Trigger: CCTGCCCTCTGTTTGCAGGCACAGGGTCACAGTCCC...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHTARSL*QAELSL
Trigger: GAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTACAGCACGCTCTCTCTaGCAAGCGGAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPTARSL*QAELSL
Trigger: GAGGCTGAGCTCCGCTTGGCAGAGAGAGCGTGCTGT...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGATGTCTGCTGGGGGCTaGGCAGACAGTCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQMSAGG*ADSLCT
Trigger: CGTGCAGAGACTGTCTGCGCAGCCCCCAGCAGACAT...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCTCGGCCCTCCTCTCTTaGGCACCTTTAAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPSALLS*APLRSE
Trigger: TTCACTTCTTAAAGGTGCGCAAGAGAGGAGGGCCGA...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTTGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCCNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTCTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCLAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACCCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNPTEMY*EWGCLL
Trigger: AAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGG...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACCCACTGAAATGTACTaGGAGTGGGGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAPTEMY*EWGCLL
Trigger: AAGAAGGCAGCCCCACTCCCAGTACATTTCAGTGGG...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGCTGTAGGACCCACCTaGCAGCAGTTCTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRAVGPT*QQFFIS
Trigger: GCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCGTGCCGAGGGCAGGTaGGAAACACGAAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPRAEGR*ETRRAQ
Trigger: TTGGGCTCTTCGTGTTTCCCACCTGCCCTCGGCACG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSNPRDG*EIRLQL
Trigger: CAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTT...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARNPRDG*EIRLQL
Trigger: CAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACCAAATCTCTTGGGCCTaGGTGAGAGGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHQISWA*VRGPLP
Trigger: TGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTG...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERPSSIA*GILSER
Trigger: TCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGG...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTGCACCTGCAGGACTCTaGAGGCCAAGAGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCAPAGL*RPRGGE
Trigger: CTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGC...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGCTGCTCTGCTCTGAGTaGCAGGGGACTGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWLLCSE*QGTDPV
Trigger: CACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAG...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCTGCTCTGCTCTGAGTaGCAGGGGACTGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDLLCSE*QGTDPV
Trigger: CACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAG...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGCCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGTCTCTAAATACCCAATaGTACATGCCAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGSLNTQ*YMPKAS
Trigger: GGAAGCCTTTGGCATGTATCATTGGGTATTTAGAGA...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGCAGAGGTCTCCCACTaGAATGTACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQAEVSH*NVLGVG
Trigger: CCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTAAAGCGAGGTGCTGCTaGTCCACACGTGGAGACACA +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRKARCC*STRGDT
Trigger: TGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTT...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGAGCATAAGACCGAGCTaGGCGGACACATGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQSIRPS*ADTCRV
Trigger: CACCCTGCATGTGTCCGCTCAGCTCGGTCTTATGCT...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTCCTCAGAAAAGAAGCTaGGATGTCTGCAAAACCGCC +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSPQKRS*DVCKTA
Trigger: GGCGGTTTTGCAGACATCTCAGCTTCTTTTCTGAGG...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCGAAGAAACATCCACGTaGTGCGGCACCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSEETST*CGTSSQ
Trigger: CTGGGAGGAGGTGCCGCATCACGTGGATGTTTCTTC...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCGAGAAAGTGAAAGGGTaGGGGAATCATTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPEKVKG*GNHFPF
Trigger: GAAGGGGAAATGATTCCCTCACCCTTTCACTTTCTC...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGAGAAAGTGAAAGGGTaGGGGAATCATTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACEKVKG*GNHFPF
Trigger: GAAGGGGAAATGATTCCCTCACCCTTTCACTTTCTC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCATCACCCTCCTAGGATaGCTGGACTACAGAACCACG +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVITLLG*LDYRTT
Trigger: CGTGGTTCTGTAGTCCAGTCATCCTAGGAGGGTGAT...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAAGGGTGGGCAGGCGATaGCTGAGCCAGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPRVGRR*LSQRGR
Trigger: TCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGAGGGTGGGCAGGCGATaGCTGAGCCAGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTRVGRR*LSQRGR
Trigger: TCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCT...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTTGGGTTTCACTACTGTaGGGCACCTGCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRWVSLL*GTCRTL
Trigger: CAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACCCA...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGGAGGGGCTGCTAACTaGGTAAATTCCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCGGAAN*VNSPKG
Trigger: TCCTTTGGGGGAATTTACTCAGTTAGCAGCCCCTCC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGGAGGGGCTGCTAACTaGGTAAATTCCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRGGAAN*VNSPKG
Trigger: TCCTTTGGGGGAATTTACTCAGTTAGCAGCCCCTCC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCCTGATATGTGTTaGGGGCAGAGATTCATACTG +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVSPDMC*GQRFIL
Trigger: CAGTATGAATCTCTGCCCGCAACACATATCAGGGGA...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCGTAGCCACTCTGTCTTaGAACAGCTTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPVATLS*NSLAIW
Trigger: CCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTAC...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGCACGTCCACCCATGTaGTCACTGAACCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGARPPM*SLNHSD
Trigger: GTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGTGCGCAGACAGTCTCTaGACGTCCACCCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVCADSL*TSTHVL
Trigger: GAGCACATGGGTGGACGTGCAGAGACTGTCTGCGCA...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCCCACCTCTGGGTTaGCCCTCACTCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHSPPLG*PSLPCF
Trigger: AAAACAGGGGAGTGAGGGGCAACCCAGAGGTGGGGA...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCAGGATGGGGGCGGCTTaGTGTTGTTGTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSRMGAA*CCCSPP
Trigger: AGGTGGGGAACAACAACAGCAAGCCGCCCCCATCCT...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAGTGCAGGCAGCAGGGTaGCTTCCTCGCGGTGAGATT +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRVQAAG*LPRGEI
Trigger: AATCTCACCGCGAGGAAGGCACCCTGCTGCCTGCAC...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR CCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACCCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGTGGAACCCGCTTTCTaGGCACGGACAAGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHVEPAF*ARTRAR
Trigger: CCGCGCTCTTGTCCGTGCCCAGAAAGCGGGTTCCAC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CCA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGAATAATCCCTGCCAAGTaGAACCCGCTTTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRIIPAK*NPLSGH
Trigger: GTGCCCAGAAAGCGGGTTCCACTTGGCAGGGATTAT...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCCATCCGCTTGGTAGTTaGGGTTTGCAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVHPLGS*GLQAWC
Trigger: ACACCAAGCCTGCAAACCCCAACTACCAAGCGGATG...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGAAATGTACTGGGAGTaGGGCTGCCTTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAEMYWE*GCLLPR
Trigger: CCTGGGAAGAAGGCAGCCCCACTCCCAGTACATTTC...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGCCCATTGCGTCTCCATaGATGCACGCAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQPIASP*MHAEVS
Trigger: GGAGACCTCTGCGTGCATCCATGGAGACGCAATGGG...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTGGGGGTCATGGGGTTaGCCACACAGACTCATACCC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHWGSWG*PHRLIP
Trigger: GGGTATGAGTCTGTGTGGCCAACCCCATGACCCCCA...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTGCACAGCTCCAAGAGTaGGTGGTGGTGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPAQLQE*VVVETS
Trigger: GGATGTCTCCACCACCACCCACTCTTGGAGCTGTGC...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGACAAATCTCTTGGGCCTaGGTGAGAGGGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGQISWA*VRGPLP
Trigger: TGGGAGAGGCCCTCTCACCCAGGCCCAAGAGATTTG...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGCCTGCTTGGCACACGTaGCTCGAACAAGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVPAWHT*LEQAAL
Trigger: AAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCAGAAAGGGAGCGGGTaGCTGGGAAACCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDQKGSG*LGNPLS
Trigger: GCTGAGAGGGTTTCCCAGCCACCCGCTCCCTTTCTG...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCGGAAGGGCTGCAGGATaGAGCAGAGCTGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSGRAAG*SRAVSS
Trigger: TGAAGACACAGCTCTGCTCCATCCTGCAGCCCTTCC...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409019.5
3UTR CAA 72 bp TCAGGGAGCTCATCGGGCGCTGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTAGCACAGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: SGSSSGAELFLS*QLPAQVAQLLS
Trigger: GCTGAGTAGCTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGCTGACACACAGCACGTaGGTTCATCCAGACCATTGT +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRLTHST*VHPDHC
Trigger: ACAATGGTCTGGATGAACTCACGTGCTGTGTGTCAG...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGGCAGAGGTCTCCCACTaGAATGTACTGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWAEVSH*NVLGVG
Trigger: CCCCACTCCCAGTACATTTCAGTGGGAGACCTCTGC...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTCTATCGAGAAAAAGCTaGGTGACGGTAACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSLSRKS*VTVTAR
Trigger: CCTTGCTGTTACCGTCACTCAGCTTTTTCTCGATAG...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCAACGGCTTGTCACAGTaGTACACACGCTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCNGLSQ*YTRLAL
Trigger: AAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTT...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGAGCTCATCGGGCGCTaGGCTATTCCTATCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQELIGR*AIPILA
Trigger: TGCAAGGATAGGAATAGCTCAGCGCCCGATGAGCTC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGACAAAGGGAGAGCGTaGAGTCTCAGTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEDKGRA*SLSQHH
Trigger: GTGATGTTGACTGAGACTTCACGCTCTCCCTTTGTC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTCTGGGGAAATGTTTCTaGCAAGAATCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACLGKCF*QESWLL
Trigger: GAGAAGCCATGATTCTTGTCAGAAACATTTCCCCAG...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGTCCCCTGATATGTGTTaGGGGCAGAGATTCATACTG +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQSPDMC*GQRFIL
Trigger: CAGTATGAATCTCTGCCCGCAACACATATCAGGGGA...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCTTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SVAGPPVALAPGSGDASSFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp AGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACTTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVSDWHSLHGLAGHVTSNLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...GTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGTACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGYWEWG*LLPRHG
Trigger: GCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTA...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGTAGCCACTCTGTCTTaGAACAGCTTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERVATLS*NSLAIW
Trigger: CCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTAC...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGAPFLH*LGDSVR
Trigger: TCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGC...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSAPFLH*LGDSVR
Trigger: TCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGC...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGATGGAAACTGGGCTGTaGACAAGGGGAATTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERMETGL*TRGIVK
Trigger: CTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCAT...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGGATGGGGGCGGCTTaGTGTTGTTGTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCRMGAA*CCCSPP
Trigger: AGGTGGGGAACAACAACAGCAAGCCGCCCCCATCCT...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCGGCAGAGATTCATACTaGCGTGACAAAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLGRDSY*RDKKSS
Trigger: GGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCC...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGTTCAGAAAGATGCCATaGCCCTCCTGTACATATTTA +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGFRKMP*PSCTYL
Trigger: TAAATATGTACAGGAGGGCCATGGCATCTTTCTGAA...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTLHQLV*LQGNRA
Trigger: TGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAG...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAGCTGTAGGACCCACCTaGCAGCAGTTCTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGAVGPT*QQFFIS
Trigger: GCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGC...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTAGCTCCAAGAGTGGGTaGTGGTGGAGACATCCCATG +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPSSKSG*WWRHPM
Trigger: CATGGGATGTCTCCACCACCACCCACTCTTGGAGCT...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCCCTGCTTGGCACACGTaGCTCGAACAAGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETPAWHT*LEQAAL
Trigger: AAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAGTGGGCCCTGAGAGATaGAAACTGGGCTGTGCACAA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGVGPER*KLGCAQ
Trigger: TTGTGCACAGCCCAGTTTCCATCTCTCAGGGCCCAC...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 72 bp AGAGTGGGTGGTGGTGGAGACATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGAACCAACTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGGGGDIPCSP*QKPKMRTNSSS
Trigger: TGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACCCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACATCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGAGGGAAAGCTCAGTCTaGCACACAGCACGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVRESSV*HTAREF
Trigger: GAACTCACGTGCTGTGTGTCAGACTGAGCTTTCCCT...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACAGGGAAAGCTCAGTCTaGCACACAGCACGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHRESSV*HTAREF
Trigger: GAACTCACGTGCTGTGTGTCAGACTGAGCTTTCCCT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGCTATCGAGAAAAAGCTaGGTGACGGTAACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRLSRKS*VTVTAR
Trigger: CCTTGCTGTTACCGTCACTCAGCTTTTTCTCGATAG...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAAAACTAGGTCATTTGTaGCCTGCTGTAGGACCCACC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGKLGHL*PAVGPT
Trigger: GGTGGGTCCTACAGCAGGTCACAAATGACCTAGTTT...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTTGCAGAAGCCTAAGATaGGAACCAACTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGACRSLR*EPTPPQ
Trigger: CTGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCA...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGATCACCCTCCTAGGATaGCTGGACTACAGAACCACG +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQITLLG*LDYRTT
Trigger: CGTGGTTCTGTAGTCCAGTCATCCTAGGAGGGTGAT...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCTCACTGAACCACAGTaGCATGCCACTGACACACAG +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPLTEPQ*HATDTQ
Trigger: CTGTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCACCCATGTGCTCACTaGACCACAGTGACATGCCAC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDHPCAH*TTVTCH
Trigger: GTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTG...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGTTCCTGGGTGGGCCCTaGGAGATGGAAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGFLGGP*EMETGL
Trigger: CAGCCCAGTTTCCATCTCTCAGGGCCCACCCAGGAA...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTCCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGTGACATGCCACTGACACACAGCAGGGACACCATGGCCCCAGAAAGGGAGCGGGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SDMPLTHSRDTMAPERERAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...CCGCTCCCTTTCTGGGGCCATGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCATACCCAATGATACATaGCAAAGGCTTCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLIPNDT*QRLPSA
Trigger: AGCACTAGGAAGCCTTTGGCATGTATCATTGGGTAT...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGATTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCGGCACTTTTAACAACTaGTCTTGCTGGAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVGTFNN*SCWSCL
Trigger: CAGACAGCTCCAGCAAGAGCAGTTGTTAAAAGTGCC...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGAGGTCATTTGTGACCTaGTGTAGGACCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQRSFVT*CRTHLA
Trigger: TGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCGCCACCAAGGGCTCGTaGCGAGGGCAGGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCATKGS*RGQVGN
Trigger: GTTTCCCACCTGCCCTCGGCACGAGCCCTTGGTGGC...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGTGCCAGCCTCACATCTaGTCAGGGAGCTCATCGGGC +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTCQPHI*SGSSSG
Trigger: GCCCGATGAGCTCCCTGAGCAGATGTGAGGCTGGCA...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAAAGAGGGCAGGGGAGTTaGCAGCCTCACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLERGQGS*QPHICS
Trigger: TGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCT...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAAGGTGGAGACATCCCATaGTCGCCCTTGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEGGDIP*SPLQKP
Trigger: AGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACC...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGTGGCTCGAACAAGCTaGGCTTTTCCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGVARTS*AFPKAK
Trigger: TTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCAC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: AGLAAREQGSKQTACHSDEEGKA*LAHVAR
Trigger: TCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTC...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAGCACGTCCACCCATGTaGTCACTGAACCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRARPPM*SLNHSD
Trigger: GTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGC...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCTTGGATGCAAATAAGTaGAGGCAGCAGGGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSLDANK*RQQGAF
Trigger: GAAGGCACCCTGCTGCCTGCACTTATTTGCATCCAA...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTTGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCCNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTGGGGTTTGCAGGCTTaGTGTAGATCGAATTACATT +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVWGLQA*CRSNYI
Trigger: AATGTAATTCGATCTACACCAAGCCTGCAAACCCCA...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTCATCCGCTTGGTAGTTaGGGTTTGCAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPHPLGS*GLQAWC
Trigger: ACACCAAGCCTGCAAACCCCAACTACCAAGCGGATG...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACAAGCCCCACTGCCAAGTaGCCGCTGTTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTSPTAK*PLLLGG
Trigger: CCCACCCAGCAACAGCGGCCACTTGGCAGTGGGGCT...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQLHQLV*LQGNRA
Trigger: TGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAG...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTGCTGTAGGACCCACCTaGCAGCAGTTCTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCAVGPT*QQFFIS
Trigger: GCTGATGAAGAACTGCTGCCAGGTGGGTCCTACAGC...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCAACAGCTTGGCTATTTaGGCCTCTCGTATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVNSLAI*ASRICH
Trigger: ATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTT...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTCTCCTGCTTCAGACCTaGCCTGACTCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCLLLQT*PDSCLQ
Trigger: TTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAGGAG...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTAAGGAAAAGCCTGCTTaGCACACGTGGCTCGAACAA +
Preference number: 4 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRKEKPA*HTWLEQ
Trigger: TTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTT...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCCTTCCTCCATTGCCTaGGGGATTCTGTCAGAACGA +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSPSSIA*GILSER
Trigger: TCGTTCTGACAGAATCCCCCAGGCAATGGAGGAAGG...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGCAGGGGCATGTCTGCTaGGGGCTGCGCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSQGHVC*GLRRQS
Trigger: AGACTGTCTGCGCAGCCCCCAGCAGACATGCCCCTG...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCAGACAATCCACACTGTaGTATCATGCTCAGAACGAA +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPRQSTL*YHAQNE
Trigger: TTCGTTCTGAGCATGATACCACAGTGTGGATTGTCT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCTCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTTCTCTAAATACCCAATaGTACATGCCAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSSLNTQ*YMPKAS
Trigger: GGAAGCCTTTGGCATGTATCATTGGGTATTTAGAGA...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAATGCTCAGAGATGTGTaGTTTGGAGTTGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAMLRDV*FGVVSI
Trigger: GATGCTAACAACTCCAAATCACACATCTCTGAGCAT...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACAAACTAGGTCATTTGTaGCCTGCTGTAGGACCCACC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHKLGHL*PAVGPT
Trigger: GGTGGGTCCTACAGCAGGTCACAAATGACCTAGTTT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGTGCAGAAGCCTAAGATaGGAACCAACTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQCRSLR*EPTPPQ
Trigger: CTGAGGAGGAGTTGGTTCTCATCTTAGGCTTCTGCA...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGGTTCAGAGAGAAAGTaGAAGGGTGAGGGAATCATT +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCGSERK*KGEGII
Trigger: AATGATTCCCTCACCCTTTCACTTTCTCTCTGAACC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCAAACAAATCTCTGGATaGAAACCCCCACTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVKQISG*KPPLEI
Trigger: GATTTCAAGTGGGGGTTTTCATCCAGAGATTTGTTT...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAACTGGGGAAATGTTTCTaGCAAGAATCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSELGKCF*QESWLL
Trigger: GAGAAGCCATGATTCTTGTCAGAAACATTTCCCCAG...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATGGAGGGGCTGCTAACTaGGTAAATTCCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AGLAAREQGSKQTACHSDGGAAN*VNSPKG
Trigger: TCCTTTGGGGGAATTTACTCAGTTAGCAGCCCCTCC...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp AGAGATGGAAACTGGGCTGTGCACAAGGGGAATTGTGAAGGGCAGGCTGAAACCTTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RDGNWAVHKGNCEGQAETLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...GGTTTCAGCCTGCCCTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAATACCCAATGATACATaGCAAAGGCTTCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAIPNDT*QRLPSA
Trigger: AGCACTAGGAAGCCTTTGGCATGTATCATTGGGTAT...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGTTGCAGCAGCCCCACTaGCAAGTGGCCGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSLQQPH*QVAAVA
Trigger: AGCAACAGCGGCCACTTGGCAGTGGGGCTGCTGCAA...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGTATCTGCCATCCAGCTaGCTCCTAGTAACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWYLPSS*LLVTPE
Trigger: CTCTGGGGTTACTAGGAGGCAGCTGGATGGCAGATA...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACATTGTTTCCAGAATCTaGAGTCACCACTTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNIVSRI*SHHLVG
Trigger: CCCTACTAAGTGGTGACTGCAGATTCTGGAAACAAT...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGTGGCTCGAACAAGCTaGGCTTTTCCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVVARTS*AFPKAK
Trigger: TTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCAC...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCGTGGCTCGAACAAGCTaGGCTTTTCCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVVARTS*AFPKAK
Trigger: TTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCAC...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAAGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEEEGKA*LAHVAR
Trigger: TCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTC...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGACCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRPLSTK*FQRQRH
Trigger: GTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGG...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGTCGGCCCTCCTCTCTTaGGCACCTTTAAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQSALLS*APLRSE
Trigger: TTCACTTCTTAAAGGTGCGCAAGAGAGGAGGGCCGA...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAATGGAAACTGGGCTGTaGACAAGGGGAATTGTGAAG +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGMETGL*TRGIVK
Trigger: CTTCACAATTCCCCTTGTGCACAGCCCAGTTTCCAT...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCCTCAGCCCCCTGCTCTaGTCTGAGTGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCLSPLL*SEWQGT
Trigger: AGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: KGGQAMTEPEGEIACRACATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAATGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLECNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATGAATCAGGGACTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: VNISRTVQQVLDCRMNQGLAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...TCCCTGATTCATTCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCACAAAAGGACTCCGTTTaGCGACCTCTAGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPQKDSV*RPLAGT
Trigger: GGTGCCCGCTAGAGGTCGCCAAACGGAGTCCTTTTG...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGCTTCATCAGCTGGTTTaGCTGCAAGGGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWLHQLV*LQGNRA
Trigger: TGCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAG...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAGCACAGCTCCAAGAGTaGGTGGTGGTGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPAQLQE*VVVETS
Trigger: GGATGTCTCCACCACCACCCACTCTTGGAGCTGTGC...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCACCTGCTTGGCACACGTaGCTCGAACAAGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPPAWHT*LEQAAL
Trigger: AAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTAGACAATCCACACTGTaGTATCATGCTCAGAACGAA +
Preference number: 4 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSRQSTL*YHAQNE
Trigger: TTCGTTCTGAGCATGATACCACAGTGTGGATTGTCT...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACAAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCTCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGCTGACACACAGCACGTaGGTTCATCCAGACCATTGT +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWLTHST*VHPDHC
Trigger: ACAATGGTCTGGATGAACTCACGTGCTGTGTGTCAG...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCCTCAGAAAAGAAGCTaGGATGTCTGCAAAACCGCC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDPQKRS*DVCKTA
Trigger: GGCGGTTTTGCAGACATCTCAGCTTCTTTTCTGAGG...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGAGAAAGTGAAAGGGTaGGGGAATCATTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQEKVKG*GNHFPF
Trigger: GAAGGGGAAATGATTCCCTCACCCTTTCACTTTCTC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCGGTTCAGAGAGAAAGTaGAAGGGTGAGGGAATCATT +
Preference number: 4 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSGSERK*KGEGII
Trigger: AATGATTCCCTCACCCTTTCACTTTCTCTCTGAACC...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAAAAAGGCAGAGAAAATaGAGCTGGCAGCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGKRQRK*SWQLSH
Trigger: GTGACTCAGCTGCCAGCTTCATTTTCTCTGCCTTTT...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGAAAAGGCAGAGAAAATaGAGCTGGCAGCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQKRQRK*SWQLSH
Trigger: GTGACTCAGCTGCCAGCTTCATTTTCTCTGCCTTTT...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTGACAAAGGGAGAGCGTaGAGTCTCAGTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCDKGRA*SLSQHH
Trigger: GTGATGTTGACTGAGACTTCACGCTCTCCCTTTGTC...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGAAACAAATCTCTGGATaGAAACCCCCACTTGAAATC +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARKQISG*KPPLEI
Trigger: GATTTCAAGTGGGGGTTTTCATCCAGAGATTTGTTT...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTCTGGGGAAATGTTTCTaGCAAGAATCATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGALGKCF*QESWLL
Trigger: GAGAAGCCATGATTCTTGTCAGAAACATTTCCCCAG...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCTTCAGCATGTCTGTCTaGATATTCTGCCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTFSMSV*IFCPNG
Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCTGAA...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: RGSLSPSILSRSRSVTARFFSPE*SEMCDL
Trigger: CAAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATACAGGATTTGGAACGTaGACTCCCACAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDTGFGT*TPTVPS
Trigger: GGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGT...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCGTAGCCACTCTGTCTTaGAACAGCTTGGCTATTTGG +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSVATLS*NSLAIW
Trigger: CCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTAC...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGTACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGGCACCCTTCCTCCATTaGCTGGGGGATTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGAPFLH*LGDSVR
Trigger: TCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGC...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATGAGGGGGAGATAGCCTaGAGAGCCTGTGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNEGEIA*RACVLT
Trigger: GGTGAGGACACAGGCTCTGCAGGCTATCTCCCCCTC...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTCGCGTCCTCCCCTGGTaGCCAGCCAGTCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCRVLPW*PASLRM
Trigger: CATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCG...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGGAGACACAGGATTTaGAACGTGCACTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDWRHRI*NVHSHS
Trigger: ACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCA...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGTGTCTTGCAACAGCTTaGCTATTTGGGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQCLATA*LFGPLV
Trigger: TACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACA...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATAAGCCAAATGTCAACTaGGTAGATAGGAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDKPNVN*VDRRGL
Trigger: GAGGCCCCTCCTATCTACCCAGTTGACATTTGGCTT...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATCTGAGAGATGGAAACTaGGCTGTGCACAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AGLAAREQGSKQTACHSDLRDGN*AVHKGN
Trigger: ATTCCCCTTGTGCACAGCCCAGTTTCCATCTCTCAG...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTCTGAGAGATGGAAACTaGGCTGTGCACAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCLRDGN*AVHKGN
Trigger: ATTCCCCTTGTGCACAGCCCAGTTTCCATCTCTCAG...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGACTTAGGACAGCAGTaGGGCATAAACACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHDLGQQ*GINTRL
Trigger: GAGCCTGGTGTTTATGCCCCACTGCTGTCCTAAGTC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCAAATTGGTTAGTAGATaGCATCTCCTTACAGACAGA +
Preference number: 4 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLKLVSR*HLLTDR
Trigger: TCTGTCTGTAAGGAGATGCCATCTACTAACCAATTT...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCCAAATTGGTTAGTAGATaGCATCTCCTTACAGACAGA +
Preference number: 4 (lower is better)
Translates to: HSSFPAPLRLHGCTQRSPKLVSR*HLLTDR
Trigger: TCTGTCTGTAAGGAGATGCCATCTACTAACCAATTT...GGGAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCAGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAATGCTCAGAGATGTGTaGTTTGGAGTTGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGMLRDV*FGVVSI
Trigger: GATGCTAACAACTCCAAATCACACATCTCTGAGCAT...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAAGGGAAAGCTCAGTCTaGCACACAGCACGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPRESSV*HTAREF
Trigger: GAACTCACGTGCTGTGTGTCAGACTGAGCTTTCCCT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGTGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQCWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCTGCTGGAGCTGTCTGTaGCCAAGCAGAGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGICWSCL*PSRAGQ
Trigger: CTGCCCGGCTCTGCTTGGTCACAGACAGCTCCAGCA...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGGTTCAGAGAGAAAGTaGAAGGGTGAGGGAATCATT +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVGSERK*KGEGII
Trigger: AATGATTCCCTCACCCTTTCACTTTCTCTCTGAACC...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGACAGTGACATGCCACTaGCACACAGCAGGGACACCA +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSTVTCH*HTAGTP
Trigger: TGGTGTCCCTGCTGTGTGTCAGTGGCATGTCACTGT...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGCTCACTGAACCACAGTaGCATGCCACTGACACACAG +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGLTEPQ*HATDTQ
Trigger: CTGTGTGTCAGTGGCATGTCACTGTGGTTCAGTGAG...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGTTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR GCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTCAGCATGTCTGTCTaGATATTCTGCCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGFSMSV*IFCPNG
Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCTGAA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTATACCCAATGATACATaGCAAAGGCTTCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAIPNDT*QRLPSA
Trigger: AGCACTAGGAAGCCTTTGGCATGTATCATTGGGTAT...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGAGGTCATTTGTGACCTaGTGTAGGACCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGRSFVT*CRTHLA
Trigger: TGCCAGGTGGGTCCTACAGCAGGTCACAAATGACCT...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGCCTAGGTCACATGTaGTCACAAGATGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTGLGHM*SQDVGL
Trigger: CAGCCCAACATCTTGTGAGCACATGTGACCTAGGCC...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGGAGGAAGGAAAAGCCTaGTTGGCACACGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSEEGKA*LAHVAR
Trigger: TCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTC...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATGAATCAGGGATGCGCAGACAGTCTCTaGACGTCCACCCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: VNISRTVQQVLDCRMNQGCADSL*TSTHVL
Trigger: GAGCACATGGGTGGACGTGCAGAGACTGTCTGCGCA...TCCCTGATTCATTCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACATCCCCACCTCTGGGTTaGCCCTCACTCCCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTSPPLG*PSLPCF
Trigger: AAAACAGGGGAGTGAGGGGCAACCCAGAGGTGGGGA...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTCACACTGTGGTATCATaGTCAGAACGAATTATCCTG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAHTVVS*SERIIL
Trigger: CAGGATAATTCGTTCTGAGCATGATACCACAGTGTG...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CCA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGGGTTTCTTTGCAGGATaGATCTCTAAATACCCAATG +
Preference number: 4 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWGFFAG*ISKYPM
Trigger: CATTGGGTATTTAGAGATCCATCCTGCAAAGAAACC...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATAACAGCTTGGCTATTTaGGCCTCTCGTATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDNSLAI*ASRICH
Trigger: ATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTT...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCAAGAGTGGGTGGTGGTaGAGACATCCCATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCKSGWW*RHPMLA
Trigger: GGCGAGCATGGGATGTCTCCACCACCACCCACTCTT...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACAAGCCAAATGTCAACTaGGTAGATAGGAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHKPNVN*VDRRGL
Trigger: GAGGCCCCTCCTATCTACCCAGTTGACATTTGGCTT...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 72 bp AATTGTAGCCACTCTGTCTTGCAACAGCTTGGCTATTaGGGCCTCTCGTATCTGCCATCCAGCTGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: NCSHSVLQQLGY*GLSYLPSSCLL
Trigger: TAGGAGGCAGCTGGATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACCACTTGCAGTCTTGTTaGGTTCTTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHHLQSC*VLLSFL
Trigger: TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTG...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAGCCTGGCGGGACACGTaGCTTCTAACACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSAWRDT*LLTRGS
Trigger: GGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGC...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGTCTCTAAATACCCAATaGTACATGCCAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQSLNTQ*YMPKAS
Trigger: GGAAGCCTTTGGCATGTATCATTGGGTATTTAGAGA...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACATGCTCAGAGATGTGTaGTTTGGAGTTGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHMLRDV*FGVVSI
Trigger: GATGCTAACAACTCCAAATCACACATCTCTGAGCAT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCATGCTCAGAGATGTGTaGTTTGGAGTTGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSMLRDV*FGVVSI
Trigger: GATGCTAACAACTCCAAATCACACATCTCTGAGCAT...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACTATCGAGAAAAAGCTaGGTGACGGTAACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLELSRKS*VTVTAR
Trigger: CCTTGCTGTTACCGTCACTCAGCTTTTTCTCGATAG...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGTCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSSFLGL*PCACKQ
Trigger: CTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGA...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCACCCATGTGCTCACTaGACCACAGTGACATGCCAC +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNHPCAH*TTVTCH
Trigger: GTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACACACCCATGTGCTCACTaGACCACAGTGACATGCCAC +
Preference number: 4 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTHPCAH*TTVTCH
Trigger: GTGGCATGTCACTGTGGTTCAGTGAGCACATGGGTG...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACTCCCCTGATATGTGTTaGGGGCAGAGATTCATACTG +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHSPDMC*GQRFIL
Trigger: CAGTATGAATCTCTGCCCGCAACACATATCAGGGGA...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGATACCCAATGATACATaGCAAAGGCTTCCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVIPNDT*QRLPSA
Trigger: AGCACTAGGAAGCCTTTGGCATGTATCATTGGGTAT...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAFFSPE*SEMCDL
Trigger: CAAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: RSVTARSLTRKRGAADPHFFSPE*SEMCDL
Trigger: CAAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAATACTGGGAGTGGGGCTaGCTTCTTCCCAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKYWEWG*LLPRHG
Trigger: GCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCAGTA...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCTTGCGTCTCCATGGATaGACGCAGAGGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCLRLHG*TQRSPT
Trigger: AGTGGGAGACCTCTGCGTGCATCCATGGAGACGCAA...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGGCACTTTTAACAACTaGTCTTGCTGGAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHGTFNN*SCWSCL
Trigger: CAGACAGCTCCAGCAAGAGCAGTTGTTAAAAGTGCC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGTCAGAACGAGGGGGCAGTTTCCAGAGACAAAGGGAGAGCGTGAAGTCTCAGCACACTGTGGTATCATaGTCAGAACGAATTATCCTG +
Preference number: 4 (lower is better)
Translates to: LSERGGSFQRQRESVKSQHTVVS*SERIIL
Trigger: CAGGATAATTCGTTCTGAGCATGATACCACAGTGTG...CTGAGACTTCACGCTCTCCCTTTGTCTCTGGAAACTGCCCCCTCGTTCTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCGGTTGGGATTTGGTTTaGTGTAGGTTGGGATATATA +
Preference number: 4 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTGWDLV*CRLGYI
Trigger: TATATATCCCAACCTACAGCAAACCAAATCCCAACC...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405094.2
CDS-3UTR CCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGGCAGAGATTCATACTaGCGTGACAAAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDGRDSY*RDKKSS
Trigger: GGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCC...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACTGGCATTCCCTGCATaGCCTGGCGGGACACGTGAC +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSLAFPA*PGGTRD
Trigger: GTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGTGGGGTTTGCAGGCTTaGTGTAGATCGAATTACATT +
Preference number: 4 (lower is better)
Translates to: SVTARSLTRKRGAADPHVWGLQA*CRSNYI
Trigger: AATGTAATTCGATCTACACCAAGCCTGCAAACCCCA...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGCAGAAAGGGAGCGGGTaGCTGGGAAACCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQQKGSG*LGNPLS
Trigger: GCTGAGAGGGTTTCCCAGCCACCCGCTCCCTTTCTG...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCAGAAAGGGAGCGGGTaGCTGGGAAACCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIQKGSG*LGNPLS
Trigger: GCTGAGAGGGTTTCCCAGCCACCCGCTCCCTTTCTG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCACTGAGAGATGGAAACTaGGCTGTGCACAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPLRDGN*AVHKGN
Trigger: ATTCCCCTTGTGCACAGCCCAGTTTCCATCTCTCAG...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGACACTTGCAGTCTTGTTaGGTTCTTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGHLQSC*VLLSFL
Trigger: TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTG...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp AGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SVSDWHSLHGLAGHVTSNVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...GTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR TCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATAGGGAAAGCTCAGTCTaGCACACAGCACGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNRESSV*HTAREF
Trigger: GAACTCACGTGCTGTGTGTCAGACTGAGCTTTCCCT...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CACTGTGGTATCATGCTCAGAACGAATTATCCTGCGGAAACACTCATGAGCACATCTTTCTTGGGACTGTaGCCCTGTGCCTGCAAACAG +
Preference number: 4 (lower is better)
Translates to: HCGIMLRTNYPAETLMSTSFLGL*PCACKQ
Trigger: CTGTTTGCAGGCACAGGGTCACAGTCCCAAGAAAGA...TGTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTGAGCATGATACCACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATATCACCCTCCTAGGATaGCTGGACTACAGAACCACG +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNITLLG*LDYRTT
Trigger: CGTGGTTCTGTAGTCCAGTCATCCTAGGAGGGTGAT...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGAAACAAATCTCTGGATaGAAACCCCCACTTGAAATC +
Preference number: 4 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQKQISG*KPPLEI
Trigger: GATTTCAAGTGGGGGTTTTCATCCAGAGATTTGTTT...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCGGCAGGAGAATCACTTaGTTTGGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFGRRIT*FGRWRL
Trigger: CAACCTCCACCTCCCAAATCAAGTGATTCTCCTGCC...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR GCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAATTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: RLEAPRHPSSIAWGILSEFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTTCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPSVCIF*PNGSII
Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAATTCAGCATGTCTGTCTaGATATTCTGCCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEFSMSV*IFCPNG
Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCTGAA...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCAGAGGGCAGGGGAGTTaGCAGCCTCACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIRGQGS*QPHICS
Trigger: TGAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCT...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACGGTTTCTTTGCAGGATaGATCTCTAAATACCCAATG +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHGFFAG*ISKYPM
Trigger: CATTGGGTATTTAGAGATCCATCCTGCAAAGAAACC...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTCAGAAAGATGCCATaGCCCTCCTGTACATATTTA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGFRKMP*PSCTYL
Trigger: TAAATATGTACAGGAGGGCCATGGCATCTTTCTGAA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGAGACAATCCACACTGTaGTATCATGCTCAGAACGAA +
Preference number: 4 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWRQSTL*YHAQNE
Trigger: TTCGTTCTGAGCATGATACCACAGTGTGGATTGTCT...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
3UTR CAA 72 bp TTCCCAGGGTGTCAATTCAATTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTGGGCCTCTCGTATCTG +
Preference number: 4 (lower is better)
Translates to: FPGCQFNCSHSV*QQLGYLGLSYL
Trigger: CAGATACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACAATTGAATTGACACCCTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGTCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGAGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCAACGGCTTGTCACAGTaGTACACACGCTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCNGLSQ*YTRLAL
Trigger: AAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTT...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAGAAGAAACATCCACGTaGTGCGGCACCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKEETST*CGTSSQ
Trigger: CTGGGAGGAGGTGCCGCATCACGTGGATGTTTCTTC...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGCCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACGGACTGGCATTCCCTaGATGGCCTGGCGGGACACG +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGRTGIP*MAWRDT
Trigger: CGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAAAACGGCCGTCTTGCTaGCTGCCGCAGCCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGKRPSC*LPQPEG
Trigger: ACCCTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTT...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDSVCIF*PNGSII
Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGCACGTCCACCCATGTaGTCACTGAACCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIARPPM*SLNHSD
Trigger: GTCACTGTGGTTCAGTGAGCACATGGGTGGACGTGC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCTCGGCCCTCCTCTCTTaGGCACCTTTAAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCSALLS*APLRSE
Trigger: TTCACTTCTTAAAGGTGCGCAAGAGAGGAGGGCCGA...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCACAGAACGAATTATCCTaGGGAAACACTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPQNELS*GNTHEH
Trigger: GTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTG...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGCAGAACGAATTATCCTaGGGAAACACTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTQNELS*GNTHEH
Trigger: GTGCTCATGAGTGTTTCCGCAGGATAATTCGTTCTG...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAAAAGCGCCAGTCTCAATaGAAACTCTTGGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEKRQSQ*KLLDAN
Trigger: ATTTGCATCCAAGAGTTTGCATTGAGACTGGCGCTT...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR CCA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGCAGAGATTCATACTaGCGTGACAAAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTGRDSY*RDKKSS
Trigger: GGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCC...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCTGCTGATCCACACGTaGAGACACAGGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNLLIHT*RHRIWN
Trigger: GTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGATTCAGAAAGATGCCATaGCCCTCCTGTACATATTTA +
Preference number: 4 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRFRKMP*PSCTYL
Trigger: TAAATATGTACAGGAGGGCCATGGCATCTTTCTGAA...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAAAGAGTGGGTGGTGGTaGAGACATCCCATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKKSGWW*RHPMLA
Trigger: GGCGAGCATGGGATGTCTCCACCACCACCCACTCTT...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTTCCAAGAGTGGGTGGTaGTGGAGACATCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCSKSGW*WRHPML
Trigger: GAGCATGGGATGTCTCCACCACCACCCACTCTTGGA...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCAAGGAAAAGCCTGCTTaGCACACGTGGCTCGAACAA +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCKEKPA*HTWLEQ
Trigger: TTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTT...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACAAATTGGTTAGTAGATaGCATCTCCTTACAGACAGA +
Preference number: 4 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHKLVSR*HLLTDR
Trigger: TCTGTCTGTAAGGAGATGCCATCTACTAACCAATTT...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACACTTGCAGTCTTGTTaGGTTCTTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEHLQSC*VLLSFL
Trigger: TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTG...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCATCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp GTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: VAGRDSYWRDKKSSLCFNGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...GTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR TCA 90 bp GTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: VAGRDSYWRDKKSSLCFNSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...GTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR GCA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGCCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAAACAAACGGCCGTCTTaGTGCCTGCCGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGNKRPS*CLPQPE
Trigger: CTCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTT...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCCTCTCAGCACCAAATaGTTCCAACGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIPLSTK*FQRQRH
Trigger: GTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACGGTTTCTTTGCAGGATaGATCTCTAAATACCCAATG +
Preference number: 4 (lower is better)
Translates to: LAAREQGSKQTACHSDTHGFFAG*ISKYPM
Trigger: CATTGGGTATTTAGAGATCCATCCTGCAAAGAAACC...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTCATCCGCTTGGTAGTTaGGGTTTGCAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCHPLGS*GLQAWC
Trigger: ACACCAAGCCTGCAAACCCCAACTACCAAGCGGATG...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGAACCCCAGAGATGGCTaGGAGATCAGACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQNPRDG*EIRLQL
Trigger: CAACTGGAGTCTGATCTCCCAGCCATCTCTGGGGTT...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATAACAGCTTGGCTATTTaGGCCTCTCGTATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNNSLAI*ASRICH
Trigger: ATGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTT...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATTGTCTTGCAACAGCTTaGCTATTTGGGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNCLATA*LFGPLV
Trigger: TACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACA...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACTCCTGCTTCAGACCTaGCCTGACTCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKLLLQT*PDSCLQ
Trigger: TTGGAGACAGGAGTCAGGCCAGGTCTGAAGCAGGAG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp GTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACGAGAATCACTTGATTTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VAGRDSYWRDKKSSLCFNENHLI*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAAATCAAGTGATTCTC...GTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR TCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGAACGGCTTGTCACAGTaGTACACACGCTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQNGLSQ*YTRLAL
Trigger: AAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTT...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCATTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCGGCAGAGATTCATACTaGCGTGACAAAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFGRDSY*RDKKSS
Trigger: GGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCC...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR CCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTAAGGAAAAGCCTGCTTaGCACACGTGGCTCGAACAA +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCKEKPA*HTWLEQ
Trigger: TTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTT...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GTAAGCAAACGGCTTGTCACAGTGATACACACGCTTGGCACTTTTAACAACTGCTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: VSKRLVTVIHTLGTFNNCSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...GCAGTTGTTAAAAGTGCCAAGCGTGTGTATCACTGTGACAAGCCGTTTGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp GTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: VAGRDSYWRDKKSSLCFNSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...GTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR TCA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR TCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACCTAAGAGAGGATTCTaGGGCTGGAACGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGPKRGF*GWNVVP
Trigger: GGGGACCACGTTCCAGCCTCAGAATCCTCTCTTAGG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp GTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATGAATCAGGGAGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VNISRTVQQVLDCRMNQGVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...TCCCTGATTCATTCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR TCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAAAACTAGGTCATTTGTaGCCTGCTGTAGGACCCACC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKKLGHL*PAVGPT
Trigger: GGTGGGTCCTACAGCAGGTCACAAATGACCTAGTTT...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGCCTCACAGAACTGCTaGAATCCAGGGCTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGASQNC*NPGLWR
Trigger: TCGCCAGAGCCCTGGATTGCAGCAGTTCTGTGAGGC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAATTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LTRKRGAADPHVETQDLEFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATGAATCAGGGAATTGTTTCCAGAATCTaGAGTCACCACTTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: VNISRTVQQVLDCRMNQGIVSRI*SHHLVG
Trigger: CCCTACTAAGTGGTGACTGCAGATTCTGGAAACAAT...TCCCTGATTCATTCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCACACTGTGGTATCATaGTCAGAACGAATTATCCTG +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNHTVVS*SERIIL
Trigger: CAGGATAATTCGTTCTGAGCATGATACCACAGTGTG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACCCAGTGTTTCGGACTaGCATTCCCTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGPSVSD*HSLHGL
Trigger: CAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTTGTCTTGCAACAGCTTaGCTATTTGGGCCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCCLATA*LFGPLV
Trigger: TACGAGAGGCCCAAATAGCCAAGCTGTTGCAAGACA...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCATCTGGAATGTCTGCTTaGTATCTAGGTCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSSGMSA*YLGPTL
Trigger: CAGAGTGGGACCTAGATATCAAGCAGACATTCCAGA...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACTATCGAGAAAAAGCTaGGTGACGGTAACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKLSRKS*VTVTAR
Trigger: CCTTGCTGTTACCGTCACTCAGCTTTTTCTCGATAG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATTCTGTCTGCATATTCTaGCCTAATGGCAGCATAATT +
Preference number: 4 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNSVCIF*PNGSII
Trigger: AATTATGCTGCCATTAGGGCAGAATATGCAGACAGA...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAATACCAAGTTACCTCGTaGTTCCCAGGGTGTCAATTC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKYQVTS*FPGCQF
Trigger: GAATTGACACCCTGGGAAGCACGAGGTAACTTGGTA...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTCCGTCTTAGCATaGTTATCTGCGAGCATTATA +
Preference number: 4 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFNSVLA*LSASII
Trigger: TATAATGCTCGCAGATAAGCATGCTAAGACGGAGTT...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR CCA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR CCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATGCAATCCAGGGCTCTaGCGAATGTCCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGCNPGL*RMSQQH
Trigger: GTGCTGTTGGGACATTCGCCAGAGCCCTGGATTGCA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATTGGCGGGTCTTCACTaGAGACTTTGGACTCCCAGT +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGLAGLH*RLWTPS
Trigger: ACTGGGAGTCCAAAGTCTGCAGTGAAGACCCGCCAA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAATTCAGCATGTCTGTCTaGATATTCTGCCCTAATGGC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKFSMSV*IFCPNG
Trigger: GCCATTAGGGCAGAATATGCAGACAGACATGCTGAA...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAACATCAGCAGGACAGTaGAGCAAGTCTTGGATTGTA +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKTSAGQ*SKSWIV
Trigger: TACAATCCAAGACTTGCTGCACTGTCCTGCTGATGT...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAATCCATTCAGAAAGATaGCATGGCCCTCCTGTACAT +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKIHSER*HGPPVH
Trigger: ATGTACAGGAGGGCCATGGCATCTTTCTGAATGGAT...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTATTGTTTCCAGAATCTaGAGTCACCACTTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCIVSRI*SHHLVG
Trigger: CCCTACTAAGTGGTGACTGCAGATTCTGGAAACAAT...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAGGCAGAGATTCATACTaGCGTGACAAAAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSGRDSY*RDKKSS
Trigger: GGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCC...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCTGGGGTTTGCAGGCTTaGTGTAGATCGAATTACATT +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIWGLQA*CRSNYI
Trigger: AATGTAATTCGATCTACACCAAGCCTGCAAACCCCA...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAAGATTCATACTGGCGTaGCAAAAAGAGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSRFILA*QKEFPM
Trigger: CATAGGGAACTCTTTTTGTCACGCCAGTATGAATCT...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAATCTCTAAATACCCAATaGTACATGCCAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKSLNTQ*YMPKAS
Trigger: GGAAGCCTTTGGCATGTATCATTGGGTATTTAGAGA...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCTTCTTTTCCCCAGAATaGTCAGAGATGTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIFFSPE*SEMCDL
Trigger: CAAATCACACATCTCTGAGCATTCTGGGGAAAAGAA...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR TCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACACTTGCAGTCTTGTTaGGTTCTTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSHLQSC*VLLSFL
Trigger: TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGGGGTCATAGACCAATaGGTAGAAGAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGGVIDQ*VEEGIL
Trigger: GAGGATACCTTCTTCTACTCATTGGTCTATGACCCC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATCCCCTGATATGTGTTaGGGGCAGAGATTCATACTG +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGSPDMC*GQRFIL
Trigger: CAGTATGAATCTCTGCCCGCAACACATATCAGGGGA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGCCGGAGGGTATTTTTaGAGACCTGACGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGAGGYF*RPDEQI
Trigger: AATTTGCTCGTCAGGTCTGCAAAAATACCCTCCGGC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CCA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAGGTTTCTTTGCAGGATaGATCTCTAAATACCCAATG +
Preference number: 4 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKGFFAG*ISKYPM
Trigger: CATTGGGTATTTAGAGATCCATCCTGCAAAGAAACC...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACCTCCATTTCATCTCTaGATAAAACAGGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGPPFHL*IKQVLR
Trigger: TCGGAGGACCTGTTTTATGCAGAGATGAAATGGAGG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCTTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGCACATAATCTACACTaGATATTAGGTGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGAHNLH*ILGGPQ
Trigger: TTGGGGCCCACCTAATATGCAGTGTAGATTATGTGC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATATTTTCAGTTGTCTaGCTTTTCACTAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIIFSVV*LFTRNP
Trigger: TGGATTCCTAGTGAAAAGGCAGACAACTGAAAATAT...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATCCCTATGTTTCAACTaGTGTTTCTGCTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGSLCFN*CFCLSV
Trigger: GACCGATAAGCAGAAACATCAGTTGAAACATAGGGA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTGAAATATGTAGTATaGAGGAAGAAAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGVKYVV*RKKAWR
Trigger: CCGCCAAGCTTTCTTCCTTCATACTACATATTTCAC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCATTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACACTTGCAGTCTTGTTaGGTTCTTCTATCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGHLQSC*VLLSFL
Trigger: TAAGAAGGATAGAAGAACTCAACAAGACTGCAAGTG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGGTTGGGATTTGGTTTaGTGTAGGTTGGGATATATA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGGWDLV*CRLGYI
Trigger: TATATATCCCAACCTACAGCAAACCAAATCCCAACC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407270.7
CDS-3UTR CCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGCTACAACTAAAAACTaGTCAATCTGTCGATCCGTA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGATTKN*SICRSV
Trigger: TACGGATCGACAGATTGACCAGTTTTTAGTTGTAGC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR TCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTATTTTTGCAGACCTaGCGAGCAAATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGVFLQT*RANFVK
Trigger: TTTCACAAAATTTGCTCGTCAGGTCTGCAAAAATAC...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR GCA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATTTAGACGTTTCTGTTaGACATATCTGTCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGFRRFC*TYLSVV
Trigger: AACTACTGACAGATATGTGCAACAGAAACGTCTAAA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SVAGPPVALAPGSGDASSAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS GCA 90 bp GAACCCGCTTTCTGGGCACGGACAAGAGCGCGGGGTAGATCGCTCTaGGGAGCCTTCACGGGGCTCTTCCCGCTCGGAGGGCCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: EPAFWARTRARGRSL*GAFTGLFPLGGPVL
Trigger: CAGCACCGGCCCTCCGAGCGGGAAGAGCCCCGTGAAGGCTCCGCAGAGCGATCTACCCCGCGCTCTTGTCCGTGCCCAGAAAGCGGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CAA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCCAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: SVAGPPVALAPGSGDASSQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS CCA 90 bp AGGCAGCAGGGTGCCTTCCTCGCGGTGAGATTCAAGGGGCCGGCCTaGAGCCTGCAGGCTCTAGGGCCAGGAAGATTCCGGGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RQQGAFLAVRFKGPA*SLQALGPGRFRVLP
Trigger: GGGAAGCACCCGGAATCTTCCTGGCCCTAGAGCCTGCAGGCTCCAGGCCGGCCCCTTGAATCTCACCGCGAGGAAGGCACCCTGCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR CAA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGCAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGTGTGGCAGGTCCCCCAGTGGCCTTGGCCCCAGGCTCTGGTGACGCGTCCTCCCCTCCTCCCAGGTCTTaGCTGAAGGGACCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: SVAGPPVALAPGSGDASSPPPRS*LKGPLS
Trigger: ACTGAGGGGTCCCTTCAGCAAAGACCTGGGAGGAGG...GGAGGACGCGTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACCTGCCACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CTCAGCCCCCTGCTCTGCTCTGAGTGGCAGGGGACTGACCCGGTGGGTCGCCTGCCTCCTCCCAGGTCTTaGCTGAAGGGACCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LSPLLCSEWQGTDPVGRLPPPRS*LKGPLS
Trigger: ACTGAGGGGTCCCTTCAGCAAAGACCTGGGAGGAGG...CAGGCGACCCACCGGGTCAGTCCCCTGCCACTCAGAGCAGAGCAGGGGGCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCGGTCCCCCAGTGGCCTaGGCCCCAGGCTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: LPQFLPRPIASPWMHAEVGPPVA*APGSGD
Trigger: GTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACC...GACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTGGTCCCCCAGTGGCCTaGGCCCCAGGCTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: KGGQAMTEPEGEIACRACGPPVA*APGSGD
Trigger: GTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACC...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGCTGTCTCCAAATCTCTaGGGCCTGGGTGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGLSPNL*GLGERA
Trigger: GGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAG...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGCCAAGTGGCCGCTGTaGCTGGGTGGGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SVTARSLTRKRGAADPHVAKWPL*LGGAQG
Trigger: GCCCTGCGCCCCACCCAGCAACAGCGGCCACTTGGC...CACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTCAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CAA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCGCAAAAGGACTCCGTTaGGCGACCTCTAGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLAKGLR*ATSSGH
Trigger: GTGCCCGCTAGAGGTCGCCAAACGGAGTCCTTTTGC...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CAA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGCAGAGGGCAGGGGAGTaGCCAGCCTCACATCTGCTC +
Preference number: 5 (lower is better)
Translates to: RGSLSPSILSRSRSVTARQRAGE*PASHLL
Trigger: GAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTG...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCCTGTCTCCAAATCTCTaGGGCCTGGGTGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLLSPNL*GLGERA
Trigger: GGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAG...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CCAGGCTCTGGTGACGCGTCCTCCCCTGGTGCCCAGCCAGTCTCAGGATGGGGGGGCTTCCTAGTGCTTTaGCTTTTCAGTGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: PGSGDASSPGAQPVSGWGGFLVL*LFSGLP
Trigger: TGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCC...CCCCCATCCTGAGACTGGCTGGGCACCAGGGGAGGACGCGTCACCAGAGCCTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACG +
Preference number: 5 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVSFPAP*RLHGCT
Trigger: CGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGA...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GGAGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCCAGAGGGCAGGGGAGTaGCCAGCCTCACATCTGCTC +
Preference number: 5 (lower is better)
Translates to: GDTGFGTCTPTVPSPPHCQRAGE*PASHLL
Trigger: GAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTG...GCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGATGTGCTCACAAGATGTaGGGCTGGAGGGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRCAHKM*GWRGGG
Trigger: ACCCCCACCCCTCCAGCCCAACATCTTGTGAGCACA...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AAGAATCATGGCTTCTCGAGGCTCCAGCCCCCACCAGACAGGTCCACAGTGTGGCTGTCTCCAAATCTCTaGGGCCTGGGTGAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KNHGFSRLQPPPDRSTVWLSPNL*GLGERA
Trigger: GGCCCTCTCACCCAGGCCCAAGAGATTTGGAGACAG...CCACACTGTGGACCTGTCTGGTGGGGGCTGGAGCCTCGAGAAGCCATGATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCTCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACG +
Preference number: 5 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSSFPAP*RLHGCT
Trigger: CGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGA...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATCCTTCCCCGCCCCATaGCGTCTCCATGGATGCACG +
Preference number: 5 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGSFPAP*RLHGCT
Trigger: CGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGA...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTTCATCAGCTGGTTaGGCTGCAAGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: RGSLSPSILSRSRSVTARSSSAG*AAREQG
Trigger: GCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGA...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACA +
Preference number: 5 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNEGKAC*AHVART
Trigger: TGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACA +
Preference number: 5 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQEGKAC*AHVART
Trigger: TGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTC...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGGCACCCTTCCTCCATaGCCTGGGGGATTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: LSRSRSVTARSLTRKRGAGTLPP*PGGFCQ
Trigger: CTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCC...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CTGACAAGAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: LTRKRGAADPHVETQDLEQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...TTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTCTTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACAGCGAGGGTTGTTAGCATCCGCTaGGTAGTTGGGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: RGSLSPSILSRSRSVTARVVSIR*VVGVCR
Trigger: CCTGCAAACCCCAACTACCAAGCGGATGCTAACAAC...CCTCGCTGTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGGGCACCCTTCCTCCATaGCCTGGGGGATTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQGTLPP*PGGFCQ
Trigger: CTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCC...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACGGCACCCTTCCTCCATaGCCTGGGGGATTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHGTLPP*PGGFCQ
Trigger: CTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCC...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS GCA 90 bp GTAGGCAAGCGCCAGTCTCAATGCAAACTCTTGGATGCAAATAAGTaGAGGCAGCAGGGTGCCTTCCTCGCGGTGAGATTCAAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: VGKRQSQCKLLDANK*RQQGAFLAVRFKGP
Trigger: CGGCCCCTTGAATCTCACCGCGAGGAAGGCACCCTGCTGCCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGACTGGCGCTTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS CCA 90 bp CAACATGGTTGTGTTTCGAGAAAGCCACTCTTCAGTTCCTGCTGCTaGTGTGGGGGCTGTGGCTACTGCACTCCAGCTCTCCAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QHGCVSRKPLFSSCC*CGGCGYCTPALQGA
Trigger: AGCTCCCTGGAGAGCTGGAGTGCAGTAGCCACAGCCCCCACACCAGCAGCAGGAACTGAAGAGTGGCTTTCTCGAAACACAACCATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS-3UTR CAA 90 bp GGCAGGTGGGAAACACGAAGAGCCCAAGCCAAAGGAGCAGGCAGGTCCCCCGGGTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: GRWETRRAQAKGAGRSPGLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...CCCGGGGGACCTGCCTGCTCCTTTGGCTTGGGCTCTTCGTGTTTCCCACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 5 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 5 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACTCTTCATCAGCTGGTTaGGCTGCAAGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: RSVTARSLTRKRGAADPHSSSAG*AAREQG
Trigger: GCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGA...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATACACACCAGAGGGCAGGGGAGTaGCCAGCCTCACATCTGCTC +
Preference number: 5 (lower is better)
Translates to: LAAREQGSKQTACHSDTHQRAGE*PASHLL
Trigger: GAGCAGATGTGAGGCTGGCAACTCCCCTGCCCTCTG...GTGTGTATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGTTTCACTACTGTGAGGCACCTGCAGGACTCTGGAGGCCAAGAGGAGGGGAGACAACAGCTTGGCTATTaGGGCCTCTCGTATCTGCCA +
Preference number: 5 (lower is better)
Translates to: GFTTVRHLQDSGGQEEGRQQLGY*GLSYLP
Trigger: TGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTG...TCTCCCCTCCTCTTGGCCTCCAGAGTCCTGCAGGTGCCTCACAGTAGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: KGGQAMTEPEGEIACRACCSHSV*QQLGYL
Trigger: CAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACA...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGAGAAGGAAAAGCCTGCTaGGCACACGTGGCTCGAACA +
Preference number: 5 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGEGKAC*AHVART
Trigger: TGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTC...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCAGAGAAAGGCTGTTTTaGCCGGTGACAAGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSRERLF*PVTRRS
Trigger: GGAACGCCTTGTCACCGGCAAAAACAGCCTTTCTCT...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS-3UTR CAA 90 bp CTCAGCAGGTCTCGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTCTTGGTAGTTGGGGTTaGCAGGCTTGGTGTAGATCG +
Preference number: 5 (lower is better)
Translates to: LSRSRSVTARSLTRKRGALGSWG*QAWCRS
Trigger: CGATCTACACCAAGCCTGCAAACCCCAACTACCAAG...AGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCGAGACCTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TCCCTGGCAGGGAAAATCAGAGACATAGTGCAGAGGAACAGGAGGGGTGGACAGGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SLAGKIRDIVQRNRRGGQVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...CTGTCCACCCCTCCTGTTCCTCTGCACTATGTCTCTGATTTTCCCTGCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACGGACAGGGAAATACCTaGAACCTCATAAACACTGGC +
Preference number: 5 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNGQGNT*NLINTG
Trigger: GCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCC...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGAGGAAGGAAAAGCCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCTCTTCATCAGCTGGTTaGGCTGCAAGGGAACAGGGC +
Preference number: 5 (lower is better)
Translates to: RGRKSLLGTRGSNKLRFSSSSAG*AAREQG
Trigger: GCCCTGTTCCCTTGCAGCCAAACCAGCTGATGAAGA...GGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGGCTTTTCCTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: RSVTARSLTRKRGAADPHIPCSP*QKPKMR
Trigger: TCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGAT...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACGCAGAGGTCTCTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: PTVPSPPHCVSMDARRGLLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...GAGACCTCTGCGTGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGACTTGGTAGTTGGGGTTaGCAGGCTTGGTGTAGATCG +
Preference number: 5 (lower is better)
Translates to: LLPRHGCEHQQDSAASLGLGSWG*QAWCRS
Trigger: CGATCTACACCAAGCCTGCAAACCCCAACTACCAAG...TCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GAAAGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACGTTGTTAGCATCCGCTaGGTAGTTGGGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ESEVLLIHTWRHRIWNVHVVSIR*VVGVCR
Trigger: CCTGCAAACCCCAACTACCAAGCGGATGCTAACAAC...GTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGGTTGTTAGCATCCGCTaGGTAGTTGGGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQVVSIR*VVGVCR
Trigger: CCTGCAAACCCCAACTACCAAGCGGATGCTAACAAC...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACTCAGAGATGTGTGATTaGGAGTTGTTAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNSEMCD*ELLASA
Trigger: AGCGGATGCTAACAACTCCAAATCACACATCTCTGA...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGTCAGAGATGTGTGATTaGGAGTTGTTAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQSEMCD*ELLASA
Trigger: AGCGGATGCTAACAACTCCAAATCACACATCTCTGA...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGTGGAGACACAGGATTaGGAACGTGCACTCCCACAG +
Preference number: 5 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDVETQD*ERALPQ
Trigger: CTGTGGGAGTGCACGTTCCAAATCCTGTGTCTCCAC...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CCTGCTTGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCCAACAGCTTGGCTATTaGGGCCTCTCGTATCTGCCA +
Preference number: 5 (lower is better)
Translates to: PAWHTWLEQAALFPKPNVQQLGY*GLSYLP
Trigger: TGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTG...GACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCGGTCCCCCAGTGGCCTaGGCCCCAGGCTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIGPPVA*APGSGD
Trigger: GTCACCAGAGCCTGGGGCCAAGGCCACTGGGGGACC...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGGGAGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: WEWGCLLPRHGCEHQQDSLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...ACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATGCACCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GTCTPTVPSPPHCVSMDAPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...TGCATCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TGCGGAAACACTCATGAGCACAGGTGCGTGCTCTGGGTTAGCTTCCCTGGCAGGTCAGAGATGTGTGATTaGGAGTTGTTAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: CGNTHEHRCVLWVSFPGRSEMCD*ELLASA
Trigger: AGCGGATGCTAACAACTCCAAATCACACATCTCTGA...CCTGCCAGGGAAGCTAACCCAGAGCACGCACCTGTGCTCATGAGTGTTTCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTGGACAGGGAAATACCTaGAACCTCATAAACACTGGC +
Preference number: 5 (lower is better)
Translates to: RHRIWNVHSHSSFPAPLRGQGNT*NLINTG
Trigger: GCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCC...ACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GAGGTGGAGGGGTTCCCTCAGCCCCTCAATTCTCAGCAGGTCTCGCTCCGTAACTCTCAATGCAAACTCTaGGATGCAAATAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: EVEGFPQPLNSQQVSLRNSQCKL*DANKCR
Trigger: CCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGA...GTTACGGAGCGAGACCTGCTGAGAATTGAGGGGCTGAGGGAACCCCTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS-3UTR CAA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACACGAGGGTCCTCTGTTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: HSLHGLAGHVTSNTRVLCLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...ACAGAGGACCCTCGTGTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CAA 90 bp ACTTTGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: TLDSQCFGLAFPAWPGGTPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...TGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CAA 90 bp AAGGGTGGGCAGGCGATGACTGAGCCAGAGGGGGAGATAGCCTGCAGAGCCTGTATATTTGGTTGGGATTaGGTTTGTAGGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: KGGQAMTEPEGEIACRACIFGWD*VCRLGY
Trigger: ATATCCCAACCTACAAACCAAATCCCAACCAAATAT...ACAGGCTCTGCAGGCTATCTCCCCCTCTGGCTCAGTCATCGCCTGCCCACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGGACTCCCAGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGATATTTGGTTGGGATTaGGTTTGTAGGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: WTPSVSDWHSLHGLAGHVIFGWD*VCRLGY
Trigger: ATATCCCAACCTACAAACCAAATCCCAACCAAATAT...CACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACTGGGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CAA 90 bp AGACTAGAGGCGCCTCGGCACCCTTCCTCCATTGCCTGGGGGATTCTGTCAGAAACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 5 (lower is better)
Translates to: RLEAPRHPSSIAWGILSETVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...TTCTGACAGAATCCCCCAGGCAATGGAGGAAGGGTGCCGAGGCGCCTCTAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTA +
Preference number: 5 (lower is better)
Translates to: FPGTAVNISRTVQQVLDCELFLS*QLPAQV
Trigger: TACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTC...ACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTA +
Preference number: 5 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDELFLS*QLPAQV
Trigger: TACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTC...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACCCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: RSVTARSLTRKRGAADPHPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGCTTGGTAGTTGGGGTTaGCAGGCTTGGTGTAGATCG +
Preference number: 5 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGLGSWG*QAWCRS
Trigger: CGATCTACACCAAGCCTGCAAACCCCAACTACCAAG...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGTGGTGGTGGAGACATCCCATGCTCGCCCTTGCAGAAGCCTAAGATGAGAACCACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 5 (lower is better)
Translates to: GGGGDIPCSPLQKPKMRTTVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...GGTTCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGATGTCTCCACCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPIPCSP*QKPKMR
Trigger: TCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGAT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGTGGGGCTGCCTTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGGAAACACAATACAAATaGGTTAGTAGATGGCATCTC +
Preference number: 5 (lower is better)
Translates to: SGAAFFPGTAVNISRTVQETQYK*VSRWHL
Trigger: GAGATGCCATCTACTAACCAATTTGTATTGTGTTTC...CTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAAGGCAGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS CCA 90 bp TTATTGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCTGCAAAGTaGCCTCATTTAGCCAGGCCATTCCCACCACCATCCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LLSILVALSPLSSAK*PHLARPFPPPSIRS
Trigger: GCTTCTGATGGATGGTGGTGGGAATGGCCTGGCTAAATGAGGCCACTTTGCAGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CCA 90 bp ACTCTACTCCGAAAAGTCCTGGGTCCTGTCCACTCTCTCTTCCGGTaGAATCAGAAGAAACAAAGAGTTTCCTCCCTGCCACTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: TLLRKVLGPVHSLFR*NQKKQRVSSLPLWE
Trigger: TTCCCAAAGTGGCAGGGAGGAAACTCTTTGTTTCTTCTGATTCCACCGGAAGAGAGAGTGGACAGGACCCAGGACTTTTCGGAGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491314.1
CDS-3UTR CAA 90 bp GACACAGGATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: DTGFGTCTPTVPSPPHCVSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...GACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAATCCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGCTTGGTAGTTGGGGTTaGCAGGCTTGGTGTAGATCG +
Preference number: 5 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSLGSWG*QAWCRS
Trigger: CGATCTACACCAAGCCTGCAAACCCCAACTACCAAG...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTTGTGCTCACAAGATGTaGGGCTGGAGGGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCCAHKM*GWRGGG
Trigger: ACCCCCACCCCTCCAGCCCAACATCTTGTGAGCACA...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS GCA 90 bp TGCATTGTTATTGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCTaGAAAGTGGCCTCATTTAGCCAGGCCATTCCCACCACCATCCAT +
Preference number: 5 (lower is better)
Translates to: CIVIVYLSGSFAALF*KVASFSQAIPTTIH
Trigger: ATGGATGGTGGTGGGAATGGCCTGGCTAAATGAGGCCACTTTGCAGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS-3UTR CAA 90 bp AGCGAGGTGCTGCTGATCCACACGTGGAGACACAGGATTTGGAACGTGCACTCCAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: SEVLLIHTWRHRIWNVHSSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...GGAGTGCACGTTCCAAATCCTGTGTCTCCACGTGTGGATCAGCAGCACCTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AGTGTTTCGGACTGGCATTCCCTGCATGGCCTGGCGGGACACGTGACTTCTAACAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: SVSDWHSLHGLAGHVTSNSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...GTTAGAAGTCACGTGTCCCGCCAGGCCATGCAGGGAATGCCAGTCCGAAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454356.5
CDS-3UTR CAA 90 bp GCTGGTTTGGCTGCAAGGGAACAGGGCAGTAAGCAAACGGCTTGTCACAGTGATCCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: AGLAAREQGSKQTACHSDPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...ATCACTGTGACAAGCCGTTTGCTTACTGCCCTGTTCCCTTGCAGCCAAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAGGCTTCCTAGTGCTTTaGCTTTTCAGTGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPGFLVL*LFSGLP
Trigger: TGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCC...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAACAGTGCAGCAAGTCTaGGATTGTAGAATGAATCAG +
Preference number: 5 (lower is better)
Translates to: PGTAVNISRTVQQVLDCRTVQQV*DCRMNQ
Trigger: CTGATTCATTCTACAATCCAAGACTTGCTGCACTGT...TCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGGGACAGGGAAATACCTaGAACCTCATAAACACTGGC +
Preference number: 5 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGGQGNT*NLINTG
Trigger: GCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCC...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAATGTGCTCACAAGATGTaGGGCTGGAGGGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKCAHKM*GWRGGG
Trigger: ACCCCCACCCCTCCAGCCCAACATCTTGTGAGCACA...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAACCTCCTCCCAGGTCTTaGCTGAAGGGACCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKPPPRS*LKGPLS
Trigger: ACTGAGGGGTCCCTTCAGCAAAGACCTGGGAGGAGG...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CGCTCCGTAACAGCGAGGTCTCTGACAAGAAAGCGAGGTGCTGCTGATCCACACGAAACACAATACAAATaGGTTAGTAGATGGCATCTC +
Preference number: 5 (lower is better)
Translates to: RSVTARSLTRKRGAADPHETQYK*VSRWHL
Trigger: GAGATGCCATCTACTAACCAATTTGTATTGTGTTTC...GTGTGGATCAGCAGCACCTCGCTTTCTTGTCAGAGACCTCGCTGTTACGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp ATTTGGAACGTGCACTCCCACAGTTCCTTCCCCGCCCCATTGCGTCTCCATGGATTGGTTTGCTGTAGGTaGGGATATATACTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: IWNVHSHSSFPAPLRLHGLVCCR*GYILVS
Trigger: TGAAACAAGTATATATCCCAACCTACAGCAAACCAA...TCCATGGAGACGCAATGGGGCGGGGAAGGAACTGTGGGAGTGCACGTTCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405094.2
CDS TCA 90 bp CCAAAAACGCCTCCTAACAGGAGATGGGAGCAAATAAGTACCTCCTaGTGGGATGGAGAACTATCCCTTGGCAAAATGTGGCATATGGCT +
Preference number: 5 (lower is better)
Translates to: PKTPPNRRWEQISTS*WDGELSLGKMWHMA
Trigger: AGCCATATGCCACATTTTGCCAAGGGATAGTTCTCCATCCCATCAGGAGGTACTTATTTGCTCCCATCTCCTGTTAGGAGGCGTTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478602.1
CDS GCA 90 bp AGGCTTGCTGGAAACTTCCCACTGTGTGTTTATCCGAAAGGCAGCTaGATTGTTATTGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RLAGNFPLCVYPKGS*IVIVYLSGSFAALF
Trigger: GAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTGGGAAGTTTCCAGCAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS-3UTR CAA 90 bp AACCCTCTCAGCACCAAATGCTTCCAACGGCAAAGGCACAGACTAGAGGCGCCTAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: NPLSTKCFQRQRHRLEAPSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...AGGCGCCTCTAGTCTGTGCCTTTGCCGTTGGAAGCATTTGGTGCTGAGAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TCATCGGGCGCTGAGCTATTCCTATCCTTGCAGCTGCCAGCACAAGTAGCACAGATATTTGGTTGGGATTaGGTTTGTAGGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: SSGAELFLSLQLPAQVAQIFGWD*VCRLGY
Trigger: ATATCCCAACCTACAAACCAAATCCCAACCAAATAT...CTGTGCTACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTCAGCGCCCGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACAACAAACGGCCGTCTaGCTGCCTGCCGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGQQTAV*LPAAAG
Trigger: TCCGGCTGCGGCAGGCAGCAAGACGGCCGTTTGTTG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp AAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGGGGTCAGAGATGTGTGATTaGGAGTTGTTAGCATCCGCT +
Preference number: 5 (lower is better)
Translates to: KAVSSLGRVKQNLQTPTGSEMCD*ELLASA
Trigger: AGCGGATGCTAACAACTCCAAATCACACATCTCTGA...CCCCGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCGGAGAATCACTTGATTaGGGAGGTGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFGESLD*GGGGCS
Trigger: ACTGCAACCTCCACCTCCCAAATCAAGTGATTCTCC...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS TCA 90 bp GCAGAGAAGGAAGAGCCAGTCTCTCATACAAACACGCCACTTATCTaGATTATTATTTTACCAGGAAAGAGGGAGGAGGGCGTCGTGAGT +
Preference number: 5 (lower is better)
Translates to: AEKEEPVSHTNTPLI*IIILPGKREEGVVS
Trigger: ACTCACGACGCCCTCCTCCCTCTTTCCTGGTAAAATAATAATTCAGATAAGTGGCGTGTTTGTATGAGAGACTGGCTCTTCCTTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CCA 90 bp ATGGGAGCAAATAAGTACCTCCTGATGGGATGGAGAACTATCCCTTaGCAAAATGTGGCATATGGCTGTATTCCCCCTTATTCCTCAACC +
Preference number: 5 (lower is better)
Translates to: MGANKYLLMGWRTIP*QNVAYGCIPPYSST
Trigger: GGTTGAGGAATAAGGGGGAATACAGCCATATGCCACATTTTGCCAAGGGATAGTTCTCCATCCCATCAGGAGGTACTTATTTGCTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478602.1
CDS-3UTR CAA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGCCACTTGCAGTCTTGTaGAGTTCTTCTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTPLAVL*SSSILL
Trigger: AAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGG...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CCCAAAGCCGTTTCCTCTCTAGGCAGAGTAAAACAGAATCTCCAAACACCCACGCCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: PKAVSSLGRVKQNLQTPTPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...CGTGGGTGTTTGGAGATTCTGTTTTACTCTGCCTAGAGAGGAAACGGCTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TTCTTCCCAGGCACGGCTGTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATATATTTGGTTGGGATTaGGTTTGTAGGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: FFPGTAVNISRTVQQVLDIFGWD*VCRLGY
Trigger: ATATCCCAACCTACAAACCAAATCCCAACCAAATAT...ATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCACAGCCGTGCCTGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GTGAACATCAGCAGGACAGTGCAGCAAGTCTTGGATTGTAGAATGAATCAGGGAGGCTTCCTAGTGCTTTaGCTTTTCAGTGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: VNISRTVQQVLDCRMNQGGFLVL*LFSGLP
Trigger: TGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCC...TCCCTGATTCATTCTACAATCCAAGACTTGCTGCACTGTCCTGCTGATGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGGTTGTTAGCATCCGCTaGGTAGTTGGGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQVVSIR*VVGVCR
Trigger: CCTGCAAACCCCAACTACCAAGCGGATGCTAACAAC...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATGGACAGGGAAATACCTaGAACCTCATAAACACTGGC +
Preference number: 5 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNGQGNT*NLINTG
Trigger: GCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCC...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AATTGGTTAGTAGATGGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCCAACAGCTTGGCTATTaGGGCCTCTCGTATCTGCCA +
Preference number: 5 (lower is better)
Translates to: NWLVDGISLQTDNPHCGIQQLGY*GLSYLP
Trigger: TGGCAGATACGAGAGGCCCAAATAGCCAAGCTGTTG...GATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCCATCTACTAACCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGGCACACGTGGCTCGAACAAGCTGCGCTTTTCCCAAAGCCAAATGTCAACTGGGAAACACAATACAAATaGGTTAGTAGATGGCATCTC +
Preference number: 5 (lower is better)
Translates to: WHTWLEQAALFPKPNVNWETQYK*VSRWHL
Trigger: GAGATGCCATCTACTAACCAATTTGTATTGTGTTTC...CCAGTTGACATTTGGCTTTGGGAAAAGCGCAGCTTGTTCGAGCCACGTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp AGCCTCCGAGGACACAGACATCTACAGCATCATTATCCTTACCAAGTTACCTCGCCACTTGCAGTCTTGTaGAGTTCTTCTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLRGHRHLQHHYPYQVTSPLAVL*SSSILL
Trigger: AAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGG...CGAGGTAACTTGGTAAGGATAATGATGCTGTAGATGTCTGTGTCCTCGGAGGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTGAGCTATTCCTATCCTaGCAGCTGCCAGCACAAGTA +
Preference number: 5 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCELFLS*QLPAQV
Trigger: TACTTGTGCTGGCAGCTGCAAGGATAGGAATAGCTC...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp CAAGGACAGGGAAATACCTTGAACCTCATAAACACTGGCGCATTTCTTAAGAAAATCCCATGCTCGCCCTaGCAGAAGCCTAAGATGAGA +
Preference number: 5 (lower is better)
Translates to: QGQGNTLNLINTGAFLKKIPCSP*QKPKMR
Trigger: TCTCATCTTAGGCTTCTGCAAGGGCGAGCATGGGAT...TTTCTTAAGAAATGCGCCAGTGTTTATGAGGTTCAAGGTATTTCCCTGTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GGCATCTCCTTACAGACAGACAATCCACACTGTGGTATCATGCTCAGAACGAATCCACTTGCAGTCTTGTaGAGTTCTTCTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: GISLQTDNPHCGIMLRTNPLAVL*SSSILL
Trigger: AAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGG...ATTCGTTCTGAGCATGATACCACAGTGTGGATTGTCTGTCTGTAAGGAGATGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp GTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAACTTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: VAGRDSYWRDKKSSLCFNLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...GTTGAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR CAA 90 bp GTAGGAGGGAGGGTCACATATAGGAATGCAGAGGGTAAACAGCAAATTCCCCCAAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: VGGRVTYRNAEGKQQIPPSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...TGGGGGAATTTGCTGTTTACCCTCTGCATTCCTATATGTGACCCTCCCTCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
CDS-3UTR CAA 90 bp CATCATTATCCTTACCAAGTTACCTCGTGCTTCCCAGGGTGTCAATTCAATTGTGGCTTCCTAGTGCTTTaGCTTTTCAGTGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: HHYPYQVTSCFPGCQFNCGFLVL*LFSGLP
Trigger: TGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCC...ACAATTGAATTGACACCCTGGGAAGCACGAGGTAACTTGGTAAGGATAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS-3UTR CAA 90 bp TGTACATATTTAGTAACTATACAGCATAAGACCGAGCTGAGCGGACACATGCAGTGTAGCCACTCTGTCTaGCAACAGCTTGGCTATTTG +
Preference number: 5 (lower is better)
Translates to: CTYLVTIQHKTELSGHMQCSHSV*QQLGYL
Trigger: CAAATAGCCAAGCTGTTGCAAGACAGAGTGGCTACA...CTGCATGTGTCCGCTCAGCTCGGTCTTATGCTGTATAGTTACTAAATATGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
CDS GCA 90 bp TTTCCCAAAGACCAAGTCAACAGAGCCATTAATTCCTTAGAAACGTaGAGCCCAGATTATCTTGGTATTTCCCAGGCAAACAAGGCTAAC +
Preference number: 5 (lower is better)
Translates to: FPKDQVNRAINSLET*SPDYLGISQANKAN
Trigger: GTTAGCCTTGTTTGCCTGGGAAATACCAAGATAATCTGGGCTGCACGTTTCTAAGGAATTAATGGCTCTGTTGACTTGGTCTTTGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS CCA 90 bp AGTTGGTCTGGCCTGACAGCAAAGACCCTACTTAAGATTTCCTTTTaGTATTGTTATTACAACTATCAGGTGACACTCCCACCACTGCTA +
Preference number: 5 (lower is better)
Translates to: SWSGLTAKTLLKISF*YCYYNYQVTLPPLL
Trigger: TAGCAGTGGTGGGAGTGTCACCTGATAGTTGTAATAACAATACCAAAAGGAAATCTTAAGTAGGGTCTTTGCTGTCAGGCCAGACCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS-3UTR CAA 90 bp TGTGTTGCGGGCAGAGATTCATACTGGCGTGACAAAAAGAGTTCCCTATGTTTCAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: CVAGRDSYWRDKKSSLCFSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...GAAACATAGGGAACTCTTTTTGTCACGCCAGTATGAATCTCTGCCCGCAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430763.5
CDS-3UTR CAA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCACCACTTGCAGTCTTGTaGAGTTCTTCTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSPLAVL*SSSILL
Trigger: AAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGG...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS TCA 90 bp CCCTACTTAAGATTTCCTTTTGGTATTGTTATTACAACTATCAGGTaGCACTCCCACCACTGCTACCAGAAGAAATCATTTAACCACTGT +
Preference number: 5 (lower is better)
Translates to: PYLRFPFGIVITTIR*HSHHCYQKKSFNHC
Trigger: ACAGTGGTTAAATGATTTCTTCTGGTAGCAGTGGTGGGAGTGTCACCTGATAGTTGTAATAACAATACCAAAAGGAAATCTTAAGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS-3UTR CAA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp AACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAGTCTCAATATTTGGTTGGGATTaGGTTTGTAGGTTGGGATAT +
Preference number: 5 (lower is better)
Translates to: NLMNPCKTGLYCLDYGVSIFGWD*VCRLGY
Trigger: ATATCCCAACCTACAAACCAAATCCCAACCAAATAT...TGAGACTCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406911.5
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACCACTTGCAGTCTTGTaGAGTTCTTCTATCCTTCTT +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGPLAVL*SSSILL
Trigger: AAGAAGGATAGAAGAACTCAACAAGACTGCAAGTGG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATTGCCACTTGCAGTCTaGTTGAGTTCTTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGLPLAV*LSSSIL
Trigger: AAGGATAGAAGAACTCAACAAGACTGCAAGTGGCAA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGACCAAGGAAGAAAATCTaGCCGTATGTCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGPRKKI*PYVIEV
Trigger: GACTTCAATGACATACGGCAAGATTTTCTTCCTTGG...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGAAGCATTATAAGTGTGTaGGAAATATCACGTCGTCTA +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGSIISV*EISRRL
Trigger: TAGACGACGTGATATTTCCAACACACTTATAATGCT...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406911.5
ENST00000407270.7
CDS-3UTR CAA 90 bp TATTTAAACCTAATGAATCCATGTAAGACTGGACTGTACTGTCTCGATTATGGATTGGTTTGCTGTAGGTaGGGATATATACTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: YLNLMNPCKTGLYCLDYGLVCCR*GYILVS
Trigger: TGAAACAAGTATATATCCCAACCTACAGCAAACCAA...TCCATAATCGAGACAGTACAGTCCAGTCTTACATGGATTCATTAGGTTTAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407270.7
CDS GCA 72 bp TTCTGGGCACGGACAAGAGCGCGGGGTAGATCGCTCTaGGGAGCCTTCACGGGGCTCTTCCCGCTCGGAGGG +
Preference number: 6 (lower is better)
Translates to: FWARTRARGRSL*GAFTGLFPLGG
Trigger: CCCTCCGAGCGGGAAGAGCCCCGTGAAGGCTCCGCAGAGCGATCTACCCCGCGCTCTTGTCCGTGCCCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS CCA 72 bp CGGGCACCGGACAATCCTGTCTCGCCTCCGGCGGGCTaGGCTGCCGGTGTCGGGTGTCAGGTGAATGAATTG +
Preference number: 6 (lower is better)
Translates to: RAPDNPVSPPAG*AAGVGCQVNEL
Trigger: CAATTCATTCACCTGACACCCGACACCGGCAGCCCAGCCCGCCGGAGGCGAGACAGGATTGTCCGGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS CCA 72 bp GGTGCCTTCCTCGCGGTGAGATTCAAGGGGCCGGCCTaGAGCCTGCAGGCTCTAGGGCCAGGAAGATTCCGG +
Preference number: 6 (lower is better)
Translates to: GAFLAVRFKGPA*SLQALGPGRFR
Trigger: CCGGAATCTTCCTGGCCCTAGAGCCTGCAGGCTCCAGGCCGGCCCCTTGAATCTCACCGCGAGGAAGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406652.5
CDS GCA 72 bp GGGCTGTGGCTACTGCACTCCAGCTCTCCAGGGAGCTaGACAAAAGCCACACGCTTAGCAGATGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: GLWLLHSSSPGS*TKATRLADAAG
Trigger: CCCCGCAGCATCTGCTAAGCGTGTGGCTTTTGTGCAGCTCCCTGGAGAGCTGGAGTGCAGTAGCCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS CAA 90 bp CCTGTGGCTGCCCTAGTAGGCAAGCGCCAGTCTCAATGCAAACTCTaGGATGCAAATAAGTGCAGGCAGCAGGGTGCCTTCCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: PVAALVGKRQSQCKL*DANKCRQQGAFLAV
Trigger: CACCGCGAGGAAGGCACCCTGCTGCCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGACTGGCGCTTGCCTACTAGGGCAGCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406652.5
ENST00000484780.5
CDS GCA 72 bp GGTTGTGTTTCGAGAAAGCCACTCTTCAGTTCCTGCTaGTGGTGTGGGGGCTGTGGCTACTGCACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GCVSRKPLFSSC*WCGGCGYCTPA
Trigger: AGCTGGAGTGCAGTAGCCACAGCCCCCACACCAGCAGCAGGAACTGAAGAGTGGCTTTCTCGAAACACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS CAA 90 bp TTTTCACTAGGAATCCACTTAAGAACCAGCGCAAAAGGACTCCGTTaGGCGACCTCTAGCGGGCACCGGACAATCCTGTCTCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: FSLGIHLRTSAKGLR*ATSSGHRTILSRLR
Trigger: CCGGAGGCGAGACAGGATTGTCCGGTGCCCGCTAGAGGTCGCCAAACGGAGTCCTTTTGCGCTGGTTCTTAAGTGGATTCCTAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS CAA 72 bp GGAATCCACTTAAGAACCAGCGCAAAAGGACTCCGTTaGGCGACCTCTAGCGGGCACCGGACAATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: GIHLRTSAKGLR*ATSSGHRTILS
Trigger: AGACAGGATTGTCCGGTGCCCGCTAGAGGTCGCCAAACGGAGTCCTTTTGCGCTGGTTCTTAAGTGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS TCA 72 bp GCAGACGAAGACCAAGAGAAAGGCTGTTTTTGCCGGTaGCAAGGCGTTCCTCCCCAGACTTTCATCCCACTC +
Preference number: 6 (lower is better)
Translates to: ADEDQEKGCFCR*QGVPPQTFIPL
Trigger: GAGTGGGATGAAAGTCTGGGGAGGAACGCCTTGTCACCGGCAAAAACAGCCTTTCTCTTGGTCTTCGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405592.5
CDS GCA 72 bp CGCCAGTCTCAATGCAAACTCTTGGATGCAAATAAGTaGAGGCAGCAGGGTGCCTTCCTCGCGGTGAGATTC +
Preference number: 6 (lower is better)
Translates to: RQSQCKLLDANK*RQQGAFLAVRF
Trigger: GAATCTCACCGCGAGGAAGGCACCCTGCTGCCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGACTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406652.5
ENST00000484780.5
CDS GCA 72 bp CCTGTGGCTGCCCTAGTAGGCAAGCGCCAGTCTCAATaGAAACTCTTGGATGCAAATAAGTGCAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PVAALVGKRQSQ*KLLDANKCRQQ
Trigger: CTGCTGCCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGACTGGCGCTTGCCTACTAGGGCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406652.5
ENST00000484780.5
CDS CCA 72 bp ATCTTAGTGGCTCTTTCGCCGCTCTCTTCTGCAAAGTaGCCTCATTTAGCCAGGCCATTCCCACCACCATCC +
Preference number: 6 (lower is better)
Translates to: ILVALSPLSSAK*PHLARPFPPPS
Trigger: GGATGGTGGTGGGAATGGCCTGGCTAAATGAGGCCACTTTGCAGAAGAGAGCGGCGAAAGAGCCACTAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CAA 72 bp GCCCTAGTAGGCAAGCGCCAGTCTCAATGCAAACTCTaGGATGCAAATAAGTGCAGGCAGCAGGGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: ALVGKRQSQCKL*DANKCRQQGAF
Trigger: GAAGGCACCCTGCTGCCTGCACTTATTTGCATCCAAGAGTTTGCATTGAGACTGGCGCTTGCCTACTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406652.5
ENST00000484780.5
CDS GCA 72 bp ATTGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCTaGAAAGTGGCCTCATTTAGCCAGGCCATTCCCACC +
Preference number: 6 (lower is better)
Translates to: IVYLSGSFAALF*KVASFSQAIPT
Trigger: GGTGGGAATGGCCTGGCTAAATGAGGCCACTTTGCAGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CCA 72 bp CGAAAAGTCCTGGGTCCTGTCCACTCTCTCTTCCGGTaGAATCAGAAGAAACAAAGAGTTTCCTCCCTGCCA +
Preference number: 6 (lower is better)
Translates to: RKVLGPVHSLFR*NQKKQRVSSLP
Trigger: TGGCAGGGAGGAAACTCTTTGTTTCTTCTGATTCCACCGGAAGAGAGAGTGGACAGGACCCAGGACTTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491314.1
CDS CAA 72 bp AGGGAGGAGGGCGTCGTGAGTAGGGAGAAAGTTTGTTaGACCTTATTTCTCTCTTCCGCAGAAGACTGGGAA +
Preference number: 6 (lower is better)
Translates to: REEGVVSREKVC*TLFLSSAEDWE
Trigger: TTCCCAGTCTTCTGCGGAAGAGAGAAATAAGGTCAAACAAACTTTCTCCCTACTCACGACGCCCTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS TCA 72 bp GGCTGCAGGATGGAGCAGAGCTGTGTCTTCACTTCATaGGCTTTTCATCCAGACCATTGTGATGACTGTAGT +
Preference number: 6 (lower is better)
Translates to: GCRMEQSCVFTS*AFHPDHCDDCS
Trigger: ACTACAGTCATCACAATGGTCTGGATGAAAAGCTCATGAAGTGAAGACACAGCTCTGCTCCATCCTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409019.5
CDS CAA 90 bp GAAACTTCCCACTGTGTGTTTATCCGAAAGGCAGCTGCATTGTTATaGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCTGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: ETSHCVFIRKAAALL*SILVALSPLSSAKW
Trigger: CCACTTTGCAGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTGGGAAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CAA 90 bp TTGCTGGAAACTTCCCACTGTGTGTTTATCCGAAAGGCAGCTGCATaGTTATTGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: LLETSHCVFIRKAAA*LLSILVALSPLSSA
Trigger: TGCAGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTGGGAAGTTTCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CAA 72 bp ACTTCCCACTGTGTGTTTATCCGAAAGGCAGCTGCATaGTTATTGTCTATCTTAGTGGCTCTTTCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: TSHCVFIRKAAA*LLSILVALSPL
Trigger: GAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTGGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS GCA 72 bp GGAAACTTCCCACTGTGTGTTTATCCGAAAGGCAGCTaGATTGTTATTGTCTATCTTAGTGGCTCTTTCGCC +
Preference number: 6 (lower is better)
Translates to: GNFPLCVYPKGS*IVIVYLSGSFA
Trigger: GGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTGGGAAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CCA 72 bp GGGATGGAGAACTATCCCTTGGCAAAATGTGGCATATaGCTGTATTCCCCCTTATTCCTCAACCACATACTT +
Preference number: 6 (lower is better)
Translates to: GMENYPLAKCGI*LYSPLFLNHIL
Trigger: AAGTATGTGGTTGAGGAATAAGGGGGAATACAGCCATATGCCACATTTTGCCAAGGGATAGTTCTCCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478602.1
CDS CAA 72 bp CACTGTGTGTTTATCCGAAAGGCAGCTGCATTGTTATaGTCTATCTTAGTGGCTCTTTCGCCGCTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: HCVFIRKAAALL*SILVALSPLSS
Trigger: AGAAGAGAGCGGCGAAAGAGCCACTAAGATAGACAATAACAATGCAGCTGCCTTTCGGATAAACACACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS GCA 72 bp GACCAAGTCAACAGAGCCATTAATTCCTTAGAAACGTaGAGCCCAGATTATCTTGGTATTTCCCAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: DQVNRAINSLET*SPDYLGISQAN
Trigger: GTTTGCCTGGGAAATACCAAGATAATCTGGGCTGCACGTTTCTAAGGAATTAATGGCTCTGTTGACTTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482875.5
CDS CCA 72 bp AATAAGTACCTCCTGATGGGATGGAGAACTATCCCTTaGCAAAATGTGGCATATGGCTGTATTCCCCCTTAT +
Preference number: 6 (lower is better)
Translates to: NKYLLMGWRTIP*QNVAYGCIPPY
Trigger: ATAAGGGGGAATACAGCCATATGCCACATTTTGCCAAGGGATAGTTCTCCATCCCATCAGGAGGTACTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478602.1
CDS CAA 90 bp ATCTCTAAATACCCAATGATACATGCCAAAGGCTTCCTAGTGCTTTaGCTTTTCAGTGGACTTCCAGATAGTTCAGCATGTCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: ISKYPMIHAKGFLVL*LFSGLPDSSACLSA
Trigger: TGCAGACAGACATGCTGAACTATCTGGAAGTCCACTGAAAAGCAAAAGCACTAGGAAGCCTTTGGCATGTATCATTGGGTATTTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405094.2
ENST00000405592.5
ENST00000406652.5
ENST00000409019.5
ENST00000467925.5
ENST00000478602.1
CDS CAA 90 bp CTTCCGGTGGAATCAGAAGAAACAAAGAGTTTCCTCCCTGCCACTTaGGGAAGTGTTAAGCGTCTCATGAATATTATAGTTCACAGACTA +
Preference number: 6 (lower is better)
Translates to: LPVESEETKSFLPAT*GSVKRLMNIIVHRL
Trigger: TAGTCTGTGAACTATAATATTCATGAGACGCTTAACACTTCCCAAAGTGGCAGGGAGGAAACTCTTTGTTTCTTCTGATTCCACCGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491314.1
CDS CAA 72 bp TTTTTCAAGTGTGGCTTTTCCTCTCATCTAATAGGCTaGCTGGAAACTTCCCACTGTGTGTTTATCCGAAAG +
Preference number: 6 (lower is better)
Translates to: FFKCGFSSHLIG*LETSHCVFIRK
Trigger: CTTTCGGATAAACACACAGTGGGAAGTTTCCAGCAAGCCTATTAGATGAGAGGAAAAGCCACACTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433553.5
CDS CAA 72 bp GAATCAGAAGAAACAAAGAGTTTCCTCCCTGCCACTTaGGGAAGTGTTAAGCGTCTCATGAATATTATAGTT +
Preference number: 6 (lower is better)
Translates to: ESEETKSFLPAT*GSVKRLMNIIV
Trigger: AACTATAATATTCATGAGACGCTTAACACTTCCCAAAGTGGCAGGGAGGAAACTCTTTGTTTCTTCTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491314.1