RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000087250

Ensembl transcript IDs: ENST00000200691.5, ENST00000561640.5, ENST00000565838.5, ENST00000566451.1, ENST00000566576.1, ENST00000570176.1

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTaGGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGC +
Preference number: 1 (lower is better)
Translates to: GKGTPATLHHRHRWH*ATWHYLHVLHTEGC
Trigger: GCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
3UTR-3UTR GCA 90 bp GGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTaGTCCACACGGAGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: GRGHQPHFTTGIGGTEPPGTIST*STRRGA
Trigger: GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCC...AGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
3UTR-3UTR CCA 90 bp GGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAACTCCAGAGCTGAGCCGCGCCATTGGAGTCTTCTaGGGATTTACAAAAACCTCT +
Preference number: 2 (lower is better)
Translates to: GSVRPERGQGTGTPELSRAIGVF*GFTKTS
Trigger: AGAGGTTTTTGTAAATCCCCAGAAGACTCCAATGGC...GCGGCTCAGCTCTGGAGTTCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR-3UTR TCA 90 bp CTGTTCATGGGATTTATTGTCATTCCTCCAAGGTCAGCAGGGGAAGGGGACACCAGGCATAGGTGGCACTaGGCCACCTGGCACTATCTC +
Preference number: 2 (lower is better)
Translates to: LFMGFIVIPPRSAGEGDTRHRWH*ATWHYL
Trigger: GAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCT...GGTGTCCCCTTCCCCTGCTGACCTTGGAGGAATGACAATAAATCCCATGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000200691.5
3UTR-3UTR CCA 90 bp TACACTGCCGTGAGCTGGGGAGATTTTGAGATCAAACTGAGAGGATCCGTAAGGTGGGTCGGGAAAGGTTaGACCAGTGTGGCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: YTAVSWGDFEIKLRGSVRWVGKG*TSVAVL
Trigger: GAGGACTGCCACACTGGTCCAACCTTTCCCGACCCA...CCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR-3UTR CCA 90 bp GGAGATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGGGAGTTTTTGAGGGATaGGTCGGGAAAGGTTGGACC +
Preference number: 2 (lower is better)
Translates to: GDFEIKLRGSVRPERGQGGVFEG*VGKGWT
Trigger: GGTCCAACCTTTCCCGACCCATCCCTCAAAAACTCC...CCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR-3UTR CAA 90 bp GGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAACTCCAGAGCTGAGCCGCATGGGTCGGGAAAGGTaGGACCAGTGTGGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: GSVRPERGQGTGTPELSRMGRER*DQCGSP
Trigger: AGGACTGCCACACTGGTCCAACCTTTCCCGACCCAT...GCGGCTCAGCTCTGGAGTTCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR TCA 72 bp GGCCGGAGAGAGGCCAAGGGACCGGAACTCCAGAGCTaGGCCGCAGCCTCACTAATGGCTTCCCCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: GRREAKGPELQS*AAASLMASPGF
Trigger: AAAACCTGGGGAAGCCATTAGTGAGGCTGCGGCTCAGCTCTGGAGTTCCGGTCCCTTGGCCTCTCTCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR TCA 72 bp ACACCAGCCACACTTCACCACAGGCATAGGTGGCACTaGGCCACCTGGCACTATCTCCACGTGCTCCACACG +
Preference number: 3 (lower is better)
Translates to: TPATLHHRHRWH*ATWHYLHVLHT
Trigger: CGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
3UTR CCA 72 bp TGGACCAGTGTGGCAGTCCTCAATCCCAGCTGCCATTaGAGTCTTCTGGGGATTTACAAAAACCTCTCGTCC +
Preference number: 3 (lower is better)
Translates to: WTSVAVLNPSCH*SLLGIYKNLSS
Trigger: GGACGAGAGGTTTTTGTAAATCCCCAGAAGACTCCAATGGCAGCTGGGATTGAGGACTGCCACACTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR GCA 90 bp GGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCGGCACTATCTCCACGTaGTCCACACGGAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGTEPPGTISTCSTRRGAGTIST*STRRGA
Trigger: GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCC...GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCTGCATCCCTCGCACTTaGAGGAGTCCGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFCIPRT*RSPRRC
Trigger: GCACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCA...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTCTCCACACGGAGGGGTaGCTTCTCACTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VALSHLALSPRAPHGGVPLHTEG*LLTGSS
Trigger: GCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAG...AGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCGGCACTATCTCCACGTaGTCCACACGGAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFGTIST*STRRGA
Trigger: GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCC...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCAGGAGTCCGCGCAGGTaGAGGAGCCACCATCTCCGA +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFRSPRR*RSHHLR
Trigger: TCGGAGATGGTGGCTCCTGCACCTGCGCGGACTCCT...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565838.5
CDS-3UTR GCA 90 bp ATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTAGGAGTCCGCGCAGGTaGAGGAGCCACCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: IGGTEPPGTISTCSTRRGRSPRR*RSHQKG
Trigger: GCCCTTCTGGTGGCTCCTGCACCTGCGCGGACTCCT...ACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000200691.5
ENST00000561640.5
CDS-3UTR GCA 90 bp AGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCTGCATCCCTCGCACTTaGAGGAGTCCGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGHQPHFTTGIGGTEPPGCIPRT*RSPRRC
Trigger: GCACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCA...GCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp AGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCGGCACTATCTCCACGTaGTCCACACGGAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGHQPHFTTGIGGTEPPGGTIST*STRRGA
Trigger: GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCC...GCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR TCA 90 bp GAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAACTCCAGAGCTGAGCCGGAACTCCAGAGCTaGGCCGCAGCCTCACTAATG +
Preference number: 4 (lower is better)
Translates to: ERIRKAGERPRDRNSRAEPELQS*AAASLM
Trigger: CATTAGTGAGGCTGCGGCTCAGCTCTGGAGTTCCGG...CTCAGCTCTGGAGTTCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR GCA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCAGGAGTCCGCGCAGGTaGAGGAGCCACCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCRSPRR*RSHQKG
Trigger: GCCCTTCTGGTGGCTCCTGCACCTGCGCGGACTCCT...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200691.5
ENST00000561640.5
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCCTGCCTCTCCGCCTTTaGACACACAGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFLPLRL*THSPWH
Trigger: GTGCCAAGGACTGTGTGTGCAAAGGCGGAGAGGCAG...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp ATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTCTCCACACGGAGGGGTaGCTTCTCACTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IGGTEPPGTISTCSTRRGLHTEG*LLTGSS
Trigger: GCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAG...ACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR CCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCGCTTCTCCAAGCAACTaGACGCGCGGCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFASPSN*TRGLAS
Trigger: AGATGCCAAGCCGCGCGTCCAGTTGCTTGGAGAAGC...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561640.5
CDS-3UTR TCA 90 bp AGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCAGGCATAGGTGGCACTaGGCCACCTGGCACTATCTC +
Preference number: 4 (lower is better)
Translates to: RGHQPHFTTGIGGTEPPGRHRWH*ATWHYL
Trigger: GAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCT...GCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGGGAGTTTTTGAGGGATGGGTCGGGAAAGGTTGGACCAGTGTGGCAGTCCTCAAGGAGTCCGCGCAGGTaGAGGAGCCACCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GEFLRDGSGKVGPVWQSSRSPRR*RSHQKG
Trigger: GCCCTTCTGGTGGCTCCTGCACCTGCGCGGACTCCT...TGAGGACTGCCACACTGGTCCAACCTTTCCCGACCCATCCCTCAAAAACTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCCTCACTGGCAGCAGCTaGACTTCTCTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFLTGSS*TSLLLP
Trigger: AGGCAGAAGCAGAGAAGTGCAGCTGCTGCCAGTGAG...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCCTCCACACGGAGGGGTaGCTTCTCACTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCLHTEG*LLTGSS
Trigger: GCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAG...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR TCA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCAGCAGCTGGAGGCGGTaGACGGGCTTCTCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCSSWRR*TGFSKQ
Trigger: TTGCTTGGAGAAGCCCGTTCACCGCCTCCAGCTGCT...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000200691.5
ENST00000561640.5
CDS-3UTR TCA 90 bp GGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTAGGCATAGGTGGCACTaGGCCACCTGGCACTATCTC +
Preference number: 4 (lower is better)
Translates to: GRGHQPHFTTGIGGTEPPRHRWH*ATWHYL
Trigger: GAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCT...AGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTCTGCCTCTCCGCCTTTaGACACACAGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRGHQPHFTTGIGGTEPPLPLRL*THSPWH
Trigger: GTGCCAAGGACTGTGTGTGCAAAGGCGGAGAGGCAG...AGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp ATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTTGCTTCTGCCTCAGCTaGCTCTCCGCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: IGGTEPPGTISTCSTRRGCFCLS*LSAFAH
Trigger: GTGTGCAAAGGCGGAGAGGCAGCTGAGGCAGAAGCA...ACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTGCTTCTGCCTCAGCTaGCTCTCCGCCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCCFCLS*LSAFAH
Trigger: GTGTGCAAAGGCGGAGAGGCAGCTGAGGCAGAAGCA...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp ATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTCTCACTGGCAGCAGCTaGACTTCTCTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IGGTEPPGTISTCSTRRGLTGSS*TSLLLP
Trigger: AGGCAGAAGCAGAGAAGTGCAGCTGCTGCCAGTGAG...ACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR CCA 90 bp CAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACTGGACGCGCGGCTTaGCATCTCCGAAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QPHFTTGIGGTEPPGTISTGRAA*HLRKWR
Trigger: TCTCCACTTTCGGAGATGCCAAGCCGCGCGTCCAGT...GGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561640.5
CDS-3UTR CCA 90 bp GTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTCACCATCTCCGAAAGTaGAGAAAAAGGCGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: VALSHLALSPRAPHGGVPHHLRK*RKRRFA
Trigger: CGCAAAGCGCCTTTTTCTCCACTTTCGGAGATGGTG...AGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565838.5
CDS-3UTR CCA 90 bp TTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGACACGGGATCGGGGCCTaGCTGTCTCTCCACATCCTG +
Preference number: 4 (lower is better)
Translates to: FEIKLRGSVRPERGQGTGHGIGA*LSLHIL
Trigger: CAGGATGTGGAGAGACAGCCAGGCCCCGATCCCGTG...TCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CCA 90 bp CAAGGGACCGGAACTCCAGAGCTGAGCCGCAGCCTCACTAATGGCTTCCCCAGGGGAGTTTTTGAGGGATaGGTCGGGAAAGGTTGGACC +
Preference number: 4 (lower is better)
Translates to: QGTGTPELSRSLTNGFPRGVFEG*VGKGWT
Trigger: GGTCCAACCTTTCCCGACCCATCCCTCAAAAACTCC...CCTGGGGAAGCCATTAGTGAGGCTGCGGCTCAGCTCTGGAGTTCCGGTCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR TCA 90 bp TTTTTGAGGGATGGGTCGGGAAAGGTTGGACCAGTGTGGCAGTCCTCAATCCCACCACATCCTGCGTGGTaGGACACCGACTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: FLRDGSGKVGPVWQSSIPPHPAW*DTDSAE
Trigger: CTCTGCGGAGTCGGTGTCTCACCACGCAGGATGTGG...TGGGATTGAGGACTGCCACACTGGTCCAACCTTTCCCGACCCATCCCTCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR GCA 90 bp CAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCCTCACTGGCAGCAGCTaGACTTCTCTGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPHFTTGIGGTEPPGTISLTGSS*TSLLLP
Trigger: AGGCAGAAGCAGAGAAGTGCAGCTGCTGCCAGTGAG...GGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS-3UTR GCA 90 bp GGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTCGAGAAAAAGGCGCTTTaGGTATTTCCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTEPPGTISTCSTRRGAFEKKAL*VFPSSS
Trigger: GGAAGAGCTGGGAAATACGCAAAGCGCCTTTTTCTC...GAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561640.5
ENST00000565838.5
CDS-3UTR TCA 90 bp TTTTTGAGGGATGGGTCGGGAAAGGTTGGACCAGTGTGGCAGTCCTCAATCCCAAGCAGCTGGAGGCGGTaGACGGGCTTCTCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: FLRDGSGKVGPVWQSSIPSSWRR*TGFSKQ
Trigger: TTGCTTGGAGAAGCCCGTTCACCGCCTCCAGCTGCT...TGGGATTGAGGACTGCCACACTGGTCCAACCTTTCCCGACCCATCCCTCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR TCA 90 bp CCGGAGAGAGGCCAAGGGACCGGAACTCCAGAGCTGAGCCGCAGCCTCACTAATCATATTACACTGCCGTaGGCTGGGGAGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PERGQGTGTPELSRSLTNHITLP*AGEILR
Trigger: TCTCAAAATCTCCCCAGCTCACGGCAGTGTAATATG...ATTAGTGAGGCTGCGGCTCAGCTCTGGAGTTCCGGTCCCTTGGCCTCTCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR TCA 90 bp CTGTTCATGGGATTTATTGTCATTCCTCCAAGGTCAGCAGGGGAAGGGGACACCAGCAGCTGGAGGCGGTaGACGGGCTTCTCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFMGFIVIPPRSAGEGDTSSWRR*TGFSKQ
Trigger: TTGCTTGGAGAAGCCCGTTCACCGCCTCCAGCTGCT...GGTGTCCCCTTCCCCTGCTGACCTTGGAGGAATGACAATAAATCCCATGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000200691.5
CDS-3UTR GCA 90 bp GGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGAGAAAAAGGCGCTTTaGGTATTTCCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGHQPHFTTGIGGTEPPEKKAL*VFPSSS
Trigger: GGAAGAGCTGGGAAATACGCAAAGCGCCTTTTTCTC...AGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561640.5
ENST00000565838.5
CDS-3UTR CCA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTGGCATCTCCGAAAGTaGAGAAAAAGGCGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCWHLRK*RKRRFA
Trigger: CGCAAAGCGCCTTTTTCTCCACTTTCGGAGATGCCA...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561640.5
CDS-3UTR CCA 90 bp GATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCTGGGTCGGGAAAGGTTaGACCAGTGTGGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: DFEIKLRGSVRPERGQGTWVGKG*TSVAVL
Trigger: GAGGACTGCCACACTGGTCCAACCTTTCCCGACCCA...GGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR GCA 90 bp CTGTTCATGGGATTTATTGTCATTCCTCCAAGGTCAGCAGGGGAAGGGGACACCCTGCCTCTCCGCCTTTaGACACACAGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LFMGFIVIPPRSAGEGDTLPLRL*THSPWH
Trigger: GTGCCAAGGACTGTGTGTGCAAAGGCGGAGAGGCAG...GGTGTCCCCTTCCCCTGCTGACCTTGGAGGAATGACAATAAATCCCATGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000200691.5
CDS-3UTR GCA 90 bp GGAGATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGTGTCTCTCCACATCCTaGGTGGTGAGACACCGACTC +
Preference number: 4 (lower is better)
Translates to: GDFEIKLRGSVRPERGQGCLSTS*VVRHRL
Trigger: GAGTCGGTGTCTCACCACGCAGGATGTGGAGAGACA...CCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CCA 90 bp CAAGGGACCGGAACTCCAGAGCTGAGCCGCAGCCTCACTAATGGCTTCCCCAGGGCCATTGGAGTCTTCTaGGGATTTACAAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: QGTGTPELSRSLTNGFPRAIGVF*GFTKTS
Trigger: AGAGGTTTTTGTAAATCCCCAGAAGACTCCAATGGC...CCTGGGGAAGCCATTAGTGAGGCTGCGGCTCAGCTCTGGAGTTCCGGTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CCA 90 bp TTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAATCAATTCCTGGGTGTaGGGCAGGGGCATCTGTATT +
Preference number: 4 (lower is better)
Translates to: FEIKLRGSVRPERGQGTGINSWV*GRGICI
Trigger: AATACAGATGCCCCTGCCCCACACCCAGGAATTGAT...TCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CCA 90 bp TTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAAATCCCAGCTGCCATTaGAGTCTTCTGGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: FEIKLRGSVRPERGQGTGNPSCH*SLLGIY
Trigger: GTAAATCCCCAGAAGACTCCAATGGCAGCTGGGATT...TCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR TCA 90 bp GATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGAGCTGGGGAGATTTTaGGATCAAACTGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: DFEIKLRGSVRPERGQGTELGRF*DQTERI
Trigger: GATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTC...GGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570176.1
3UTR CAA 72 bp TTGGACCAGTGTGGCAGTCCTCAATCCCAGCTGCCATaGGAGTCTTCTGGGGATTTACAAAAACCTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LDQCGSPQSQLP*ESSGDLQKPLV
Trigger: GACGAGAGGTTTTTGTAAATCCCCAGAAGACTCCAATGGCAGCTGGGATTGAGGACTGCCACACTGGTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CCA 90 bp GATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCTACACTGCCGTGAGCTaGGGAGATTTTGAGATCAAA +
Preference number: 4 (lower is better)
Translates to: DFEIKLRGSVRPERGQGTYTAVS*GDFEIK
Trigger: TTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTA...GGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS GCA 90 bp GAAGGCGCAGGGCGTGGGTTTCTTTGCAGGTACAAGGGCGCGCAGTaGGCAGGATGCGAGCGGGGGCGGGGGCTCACCAGAAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EGAGRGFLCRYKGAQ*AGCERGRGLTRRAG
Trigger: CCCTGCCCTTCTGGTGAGCCCCCGCCCCCGCTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 90 bp TTCCCCCAAGTGTCCTTGAGCGAAGGCGCAGGGCGTGGGTTTCTTTaGAGGTACAAGGGCGCGCAGTGCGCAGGATGCGAGCGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: FPQVSLSEGAGRGFL*RYKGAQCAGCERGR
Trigger: CCGCCCCCGCTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACTTGGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 90 bp GAGTCAGAAACCACGGGATCGGGGCCTGGCTGTCTCTCCACATCCTaGGTGGTGAGACACCGACTCCGCAGAGCAGAGGGGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: ESETTGSGPGCLSTS*VVRHRLRRAEGAAA
Trigger: TGCCGCCGCCCCCTCTGCTCTGCGGAGTCGGTGTCTCACCACGCAGGATGTGGAGAGACAGCCAGGCCCCGATCCCGTGGTTTCTGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566451.1
ENST00000570176.1
CDS-3UTR CAA 90 bp GGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTGCATCCCTCGCACTaGCAGGAGTCCGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GGTEPPGTISTCSTRRGALHPSH*QESAQV
Trigger: CACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCAA...GGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS TCA 90 bp GCAGGTCTCAGGGTCCATGTCGAGGAGAGCAGCAGCTGGAGGCGGTaGACGGGCTTCTCCAAGCAACTGGACGCGCGGCTTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: AGLRVHVEESSSWRR*TGFSKQLDARLGIS
Trigger: GGAGATGCCAAGCCGCGCGTCCAGTTGCTTGGAGAAGCCCGTTCACCGCCTCCAGCTGCTGCTCTCCTCGACATGGACCCTGAGACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561640.5
CDS GCA 90 bp ATGTGGACGAACTCGGGTCCCCACGCCTGTCACGAGGAGATGGGGTaGCAAGTCTCCCTGTTCTCCGCGACACAGGCATGCCCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: MWTNSGPHACHEEMG*QVSLFSATQACPPF
Trigger: GAAGGGCGGGCATGCCTGTGTCGCGGAGAACAGGGAGACTTGGCACCCCATCTCCTCGTGACAGGCGTGGGGACCCGAGTTCGTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 90 bp TCAGGGGCCCTTCCCCCAAGTGTCCTTGAGCGAAGGCGCAGGGCGTaGGTTTCTTTGCAGGTACAAGGGCGCGCAGTGCGCAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: SGALPPSVLERRRRA*VSLQVQGRAVRRMR
Trigger: TCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACTTGGGGGAAGGGCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 90 bp TGCAGGAGCCACCTAGAGAGGGCGACGCCACAGGAAGGGTTAATGTaGACGAACTCGGGTCCCCACGCCAGAAGGGCAGGGGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: CRSHLERATPQEGLM*TNSGPHARRAGAGL
Trigger: GAGACCTGCCCCTGCCCTTCTGGCGTGGGGACCCGAGTTCGTCCACATTAACCCTTCCTGTGGCGTCGCCCTCTCTAGGTGGCTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566576.1
CDS-3UTR CAA 90 bp GTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTGCCTTTGCATCCCTCGCACTaGCAGGAGTCCGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VALSHLALSPRAPHGGVPLHPSH*QESAQV
Trigger: CACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCAA...AGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS CCA 90 bp TGCAGGAGCCACCTAGAGAGGGCGACGCCACAGGAAGGGTTAATGTaGACGAACTCGGGTCCCCACGCCTGTCACGAGGAGATGGGGTGC +
Preference number: 5 (lower is better)
Translates to: CRSHLERATPQEGLM*TNSGPHACHEEMGC
Trigger: GCACCCCATCTCCTCGTGACAGGCGTGGGGACCCGAGTTCGTCCACATTAACCCTTCCTGTGGCGTCGCCCTCTCTAGGTGGCTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 90 bp CTCCACGTGCTCCACACGGAGGGGTGCCTTCTCACTGGCAGCAGCTaGACTTCTCTGCTTCTGCCTCAGCTGCCTCTCCGCCTTTGCACA +
Preference number: 5 (lower is better)
Translates to: LHVLHTEGCLLTGSS*TSLLLPQLPLRLCT
Trigger: TGTGCAAAGGCGGAGAGGCAGCTGAGGCAGAAGCAGAGAAGTGCAGCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAGCACGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
ENST00000566451.1
ENST00000566576.1
CDS-3UTR CAA 90 bp AGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCGCTGCCTCTCCGCCTTaGCACACACAGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RGHQPHFTTGIGGTEPPGAASPP*HTQSLA
Trigger: TGCCAAGGACTGTGTGTGCAAAGGCGGAGAGGCAGC...GCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS TCA 90 bp GTCTCCCTGTTCTCCGCGACACAGGCATGCCCGCCCTTCACGAGGTaGAGAATAGGGAATCAGGGGCCCTTCCCCCAAGTGTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VSLFSATQACPPFTR*RIGNQGPFPQVSLS
Trigger: GCTCAAGGACACTTGGGGGAAGGGCCCCTGATTCCCTATTCTTCACCTCGTGAAGGGCGGGCATGCCTGTGTCGCGGAGAACAGGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS-3UTR CAA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCTTGCATCCCTCGCACTaGCAGGAGTCCGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCLHPSH*QESAQV
Trigger: CACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCAA...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
CDS GCA 90 bp ACAGGAGTGAGGTACCCAGGAAATGACCAGAGCCCCTTGGGTGGATaGCAGGAAGTCCTGGGGGCTGGTGGGCTTAAGCCCAGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: TGVRYPGNDQSPLGG*QEVLGAGGLKPSLG
Trigger: ACCTAAGCTGGGCTTAAGCCCACCAGCCCCCAGGACTTCCTGGCATCCACCCAAGGGGCTCTGGTCATTTCCTGGGTACCTCACTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 90 bp GGTGGTTCTATTCCAGCAAGAGTCAGAAACCACGGGATCGGGGCCTaGCTGTCTCTCCACATCCTGCGTGGTGAGACACCGACTCCGCAG +
Preference number: 5 (lower is better)
Translates to: GGSIPARVRNHGIGA*LSLHILRGETPTPQ
Trigger: CTGCGGAGTCGGTGTCTCACCACGCAGGATGTGGAGAGACAGCCAGGCCCCGATCCCGTGGTTTCTGACTCTTGCTGGAATAGAACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566451.1
ENST00000570176.1
CDS TCA 90 bp CAGCCAGGGCTAGTCGCAGCCCCCTTCTTAGTCTCACACCTGCTTTaGCTCAGCATCTATGTCGCGGCAGTGGCATCCTGCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: QPGLVAAPFLVSHLL*LSIYVAAVASCTST
Trigger: TGTGGAGGTGCAGGATGCCACTGCCGCGACATAGATGCTGAGTCAAAGCAGGTGTGAGACTAAGAAGGGGGCTGCGACTAGCCCTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 90 bp ATATGGTGCAGATGTAAGGGGCCCAGGAAAGCCGTGGGGAGGCGGTaGGGACCTGTGCCTGGTTTCATACCTAGGGAAGAAGGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: IWCRCKGPRKAVGRR*GPVPGFIPREEGSL
Trigger: AAGGCTCCCTTCTTCCCTAGGTATGAAACCAGGCACAGGTCCCCACCGCCTCCCCACGGCTTTCCTGGGCCCCTTACATCTGCACCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS-3UTR CAA 90 bp GAGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGGGACCGGAACTATGGGTCGGGAAAGGTaGGACCAGTGTGGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: EIKLRGSVRPERGQGTGTMGRER*DQCGSP
Trigger: AGGACTGCCACACTGGTCCAACCTTTCCCGACCCAT...AGTTCCGGTCCCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS-3UTR CAA 90 bp GGAAGGGGACACCAGCCACACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGAGAAAAAGGCGCTTaGCGTATTTCCCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GRGHQPHFTTGIGGTEPPGEKGA*RISQLF
Trigger: GAAGAGCTGGGAAATACGCAAAGCGCCTTTTTCTCC...AGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTGTGGCTGGTGTCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561640.5
ENST00000565838.5
CDS-3UTR CAA 90 bp CACTTCACCACAGGCATAGGTGGCACTGAGCCACCTGGCACTATCTCCACGTGCGGAGAAAAAGGCGCTTaGCGTATTTCCCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: HFTTGIGGTEPPGTISTCGEKGA*RISQLF
Trigger: GAAGAGCTGGGAAATACGCAAAGCGCCTTTTTCTCC...GCACGTGGAGATAGTGCCAGGTGGCTCAGTGCCACCTATGCCTGTGGTGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561640.5
ENST00000565838.5
CDS CCA 90 bp GGACCAGTGTGGCAGTCCTCAATCCCAGCTGCCATTGGAGTCTTCTaGGGATTTACAAAAACCTCTCGTCCCACGCCTAGGCCATCAATT +
Preference number: 5 (lower is better)
Translates to: GPVWQSSIPAAIGVF*GFTKTSRPTPRPSI
Trigger: AATTGATGGCCTAGGCGTGGGACGAGAGGTTTTTGTAAATCCCCAGAAGACTCCAATGGCAGCTGGGATTGAGGACTGCCACACTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566451.1
ENST00000570176.1
CDS-3UTR CAA 90 bp TATTACACTGCCGTGAGCTGGGGAGATTTTGAGATCAAACTGAGAGGATCCGTATTGCATCCCTCGCACTaGCAGGAGTCCGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: YYTAVSWGDFEIKLRGSVLHPSH*QESAQV
Trigger: CACCTGCGCGGACTCCTGCAAGTGCGAGGGATGCAA...TACGGATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570176.1
CDS TCA 90 bp TCTTACTCCCTATGCATATTACACTGCCGTGAGCTGGGGAGATTTTaGGATCAAACTGAGAGGATCCGTAAGGCCGGAGAGAGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SYSLCILHCRELGRF*DQTERIRKAGERPR
Trigger: CCTTGGCCTCTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTAATATGCATAGGGAGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 90 bp TTCCTCCCACCTCTTACTCCCTATGCATATTACACTGCCGTGAGCTaGGGAGATTTTGAGATCAAACTGAGAGGATCCGTAAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: FLPPLTPYAYYTAVS*GDFEIKLRGSVRPE
Trigger: CTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTAATATGCATAGGGAGTAAGAGGTGGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS TCA 90 bp TGGGTACTAGGCCTTAAGGAGAAAGCATCACAGGGTAAACGACCTTaGAAGGGGCCTCAAAGGATAAACTTGGGAGGGGCAGATATGGTG +
Preference number: 5 (lower is better)
Translates to: WVLGLKEKASQGKRP*KGPQRINLGGADMV
Trigger: CACCATATCTGCCCCTCCCAAGTTTATCCTTTGAGGCCCCTTTCAAGGTCGTTTACCCTGTGATGCTTTCTCCTTAAGGCCTAGTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS TCA 72 bp GATCGGGGCCTGGCTGTCTCTCCACATCCTGCGTGGTaGGACACCGACTCCGCAGAGCAGAGGGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: DRGLAVSPHPAW*DTDSAEQRGRR
Trigger: CCGCCGCCCCCTCTGCTCTGCGGAGTCGGTGTCTCACCACGCAGGATGTGGAGAGACAGCCAGGCCCCGATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566451.1
ENST00000570176.1
CDS GCA 72 bp GGGCGTGGGTTTCTTTGCAGGTACAAGGGCGCGCAGTaGGCAGGATGCGAGCGGGGGCGGGGGCTCACCAGA +
Preference number: 6 (lower is better)
Translates to: GRGFLCRYKGAQ*AGCERGRGLTR
Trigger: TCTGGTGAGCCCCCGCCCCCGCTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 72 bp TTTCTTTGCAGGTACAAGGGCGCGCAGTGCGCAGGATaGGAGCGGGGGCGGGGGCTCACCAGAAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: FLCRYKGAQCAG*ERGRGLTRRAG
Trigger: CCCTGCCCTTCTGGTGAGCCCCCGCCCCCGCTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CAA 90 bp CTTCCCCCAAGTGTCCTTGAGCGAAGGCGCAGGGCGTGGGTTTCTTaGCAGGTACAAGGGCGCGCAGTGCGCAGGATGCGAGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: LPPSVLERRRRAWVS*QVQGRAVRRMRAGA
Trigger: CGCCCCCGCTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACTTGGGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 72 bp ACCACGGGATCGGGGCCTGGCTGTCTCTCCACATCCTaGGTGGTGAGACACCGACTCCGCAGAGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: TTGSGPGCLSTS*VVRHRLRRAEG
Trigger: CCCCTCTGCTCTGCGGAGTCGGTGTCTCACCACGCAGGATGTGGAGAGACAGCCAGGCCCCGATCCCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566451.1
ENST00000570176.1
CDS CCA 72 bp GGACGAACTCGGGTCCCCACGCCTGTCACGAGGAGATaGGGTGCCAAGTCTCCCTGTTCTCCGCGACACAGG +
Preference number: 6 (lower is better)
Translates to: GRTRVPTPVTRR*GAKSPCSPRHR
Trigger: CCTGTGTCGCGGAGAACAGGGAGACTTGGCACCCCATCTCCTCGTGACAGGCGTGGGGACCCGAGTTCGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 72 bp GTGTCCTTGAGCGAAGGCGCAGGGCGTGGGTTTCTTTaGAGGTACAAGGGCGCGCAGTGCGCAGGATGCGAG +
Preference number: 6 (lower is better)
Translates to: VSLSEGAGRGFL*RYKGAQCAGCE
Trigger: CTCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 72 bp AACTCGGGTCCCCACGCCTGTCACGAGGAGATGGGGTaGCAAGTCTCCCTGTTCTCCGCGACACAGGCATGC +
Preference number: 6 (lower is better)
Translates to: NSGPHACHEEMG*QVSLFSATQAC
Trigger: GCATGCCTGTGTCGCGGAGAACAGGGAGACTTGGCACCCCATCTCCTCGTGACAGGCGTGGGGACCCGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS GCA 72 bp GGCCCAGGAAAGCCGTGGGGAGGCGGTGGGGACCTGTaGCTGGTTTCATACCTAGGGAAGAAGGGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: GPGKPWGGGGDL*LVSYLGKKGAF
Trigger: GAAGGCTCCCTTCTTCCCTAGGTATGAAACCAGGCACAGGTCCCCACCGCCTCCCCACGGCTTTCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 72 bp CTTCCCCCAAGTGTCCTTGAGCGAAGGCGCAGGGCGTaGGTTTCTTTGCAGGTACAAGGGCGCGCAGTGCGC +
Preference number: 6 (lower is better)
Translates to: LPPSVLERRRRA*VSLQVQGRAVR
Trigger: GCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACTTGGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 72 bp CACCTAGAGAGGGCGACGCCACAGGAAGGGTTAATGTaGACGAACTCGGGTCCCCACGCCAGAAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: HLERATPQEGLM*TNSGPHARRAG
Trigger: CCCTGCCCTTCTGGCGTGGGGACCCGAGTTCGTCCACATTAACCCTTCCTGTGGCGTCGCCCTCTCTAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566576.1
CDS GCA 72 bp AGGTACCCAGGAAATGACCAGAGCCCCTTGGGTGGATaGCAGGAAGTCCTGGGGGCTGGTGGGCTTAAGCCC +
Preference number: 6 (lower is better)
Translates to: RYPGNDQSPLGG*QEVLGAGGLKP
Trigger: GGGCTTAAGCCCACCAGCCCCCAGGACTTCCTGGCATCCACCCAAGGGGCTCTGGTCATTTCCTGGGTACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 72 bp CACCTAGAGAGGGCGACGCCACAGGAAGGGTTAATGTaGACGAACTCGGGTCCCCACGCCTGTCACGAGGAG +
Preference number: 6 (lower is better)
Translates to: HLERATPQEGLM*TNSGPHACHEE
Trigger: CTCCTCGTGACAGGCGTGGGGACCCGAGTTCGTCCACATTAACCCTTCCTGTGGCGTCGCCCTCTCTAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CAA 72 bp AGTGTCCTTGAGCGAAGGCGCAGGGCGTGGGTTTCTTaGCAGGTACAAGGGCGCGCAGTGCGCAGGATGCGA +
Preference number: 6 (lower is better)
Translates to: SVLERRRRAWVS*QVQGRAVRRMR
Trigger: TCGCATCCTGCGCACTGCGCGCCCTTGTACCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS TCA 72 bp TTCTCCGCGACACAGGCATGCCCGCCCTTCACGAGGTaGAGAATAGGGAATCAGGGGCCCTTCCCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: FSATQACPPFTR*RIGNQGPFPQV
Trigger: CACTTGGGGGAAGGGCCCCTGATTCCCTATTCTTCACCTCGTGAAGGGCGGGCATGCCTGTGTCGCGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CCA 72 bp GCAGCTGGAGGCGGTGAACGGGCTTCTCCAAGCAACTaGACGCGCGGCTTGGCATCTCCGAAAGTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: AAGGGERASPSN*TRGLASPKVEK
Trigger: TTTCTCCACTTTCGGAGATGCCAAGCCGCGCGTCCAGTTGCTTGGAGAAGCCCGTTCACCGCCTCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561640.5
CDS GCA 72 bp CTGGCAGCAGCTGCACTTCTCTGCTTCTGCCTCAGCTaGCTCTCCGCCTTTGCACACACAGTCCTTGGCACA +
Preference number: 6 (lower is better)
Translates to: LAAAALLCFCLS*LSAFAHTVLGT
Trigger: TGTGCCAAGGACTGTGTGTGCAAAGGCGGAGAGGCAGCTGAGGCAGAAGCAGAGAAGTGCAGCTGCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
ENST00000566451.1
ENST00000566576.1
CDS GCA 72 bp ACCTGGCACTATCTCCACGTGCTCCACACGGAGGGGTaGCTTCTCACTGGCAGCAGCTGCACTTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: TWHYLHVLHTEG*LLTGSSCTSLL
Trigger: AAGCAGAGAAGTGCAGCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAGCACGTGGAGATAGTGCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000200691.5
ENST00000561640.5
ENST00000565838.5
ENST00000566451.1
ENST00000566576.1
CDS CCA 72 bp AGATATGGTGCAGATGTAAGGGGCCCAGGAAAGCCGTaGGGAGGCGGTGGGGACCTGTGCCTGGTTTCATAC +
Preference number: 6 (lower is better)
Translates to: RYGADVRGPGKP*GGGGDLCLVSY
Trigger: GTATGAAACCAGGCACAGGTCCCCACCGCCTCCCCACGGCTTTCCTGGGCCCCTTACATCTGCACCATATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CAA 72 bp AGAATAGGGAATCAGGGGCCCTTCCCCCAAGTGTCCTaGAGCGAAGGCGCAGGGCGTGGGTTTCTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: RIGNQGPFPQVS*SEGAGRGFLCR
Trigger: CCTGCAAAGAAACCCACGCCCTGCGCCTTCGCTCAAGGACACTTGGGGGAAGGGCCCCTGATTCCCTATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CAA 90 bp TCAGCCAGGGCTAGTCGCAGCCCCCTTCTTAGTCTCACACCTGCTTaGACTCAGCATCTATGTCGCGGCAGTGGCATCCTGCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: SARASRSPLLSLTPA*TQHLCRGSGILHLH
Trigger: GTGGAGGTGCAGGATGCCACTGCCGCGACATAGATGCTGAGTCAAAGCAGGTGTGAGACTAAGAAGGGGGCTGCGACTAGCCCTGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS TCA 72 bp CTAGTCGCAGCCCCCTTCTTAGTCTCACACCTGCTTTaGCTCAGCATCTATGTCGCGGCAGTGGCATCCTGC +
Preference number: 6 (lower is better)
Translates to: LVAAPFLVSHLL*LSIYVAAVASC
Trigger: GCAGGATGCCACTGCCGCGACATAGATGCTGAGTCAAAGCAGGTGTGAGACTAAGAAGGGGGCTGCGACTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS CAA 72 bp GCTAGTCGCAGCCCCCTTCTTAGTCTCACACCTGCTTaGACTCAGCATCTATGTCGCGGCAGTGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: ASRSPLLSLTPA*TQHLCRGSGIL
Trigger: CAGGATGCCACTGCCGCGACATAGATGCTGAGTCAAAGCAGGTGTGAGACTAAGAAGGGGGCTGCGACTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566451.1
CDS TCA 72 bp CTATGCATATTACACTGCCGTGAGCTGGGGAGATTTTaGGATCAAACTGAGAGGATCCGTAAGGCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: LCILHCRELGRF*DQTERIRKAGE
Trigger: CTCTCCGGCCTTACGGATCCTCTCAGTTTGATCTCAAAATCTCCCCAGCTCACGGCAGTGTAATATGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566451.1