Pregenerated sensors for MT1X (Homo sapiens)
Ensembl gene IDs: ENSG00000187193Ensembl transcript IDs: ENST00000562939.1, ENST00000568370.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGCAGGAGACCTAGGTTCACATTCCAGCTTTGTTCCCAACACTATCTGGTAACCTGGCCTGCCCCTGCCTaGAGAGCTCTGGGTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GRRPRFTFQLCSQHYLVTWPAPA*RALGSL Trigger: CAGGGAACCCAGAGCTCTGCAGGCAGGGGCAGGCCA...GGTTACCAGATAGTGTTGGGAACAAAGCTGGAATGTGAACCTAGGTCTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGGCAGGAGACCTAGGTTCACATTCCAGCTTTGTTCCCAACACTATCTGTCATTGGCCTGCCCCTaGCTGCAGAGCTCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SGGRRPRFTFQLCSQHYLSLACP*LQSSGF Trigger: GAACCCAGAGCTCTGCAGGCAGGGGCAGGCCAATGA...CAGATAGTGTTGGGAACAAAGCTGGAATGTGAACCTAGGTCTCCTGCCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAGGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATAGCTGGTCATTGGCCTaGCCCTGCCTGCAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PAGKDWIIRFEITRGLPDSWSLA*PCLQSS Trigger: AGAGCTCTGCAGGCAGGGGCAGGCCAATGACCAGCT...ATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGGGGTTGAAGGAGGGGTTTaGGGAAGCTGGTCATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GKDWIIRFEITRGLPDPGVEGGV*GSWSLA Trigger: GGCCAATGACCAGCTTCCCCAAACCCCTCCTTCAAC...CCCAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| 3UTR TCA 72 bp | ATAAGAGGCTGGGACTCACCCATTTTTAAGGCAATTTaGGGTCTGATTCTGAATCAGGTGTTGAAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: IRGWDSPIFKAI*GLILNQVLKEG Trigger: CCCCTCCTTCAACACCTGATTCAGAATCAGACCTCAAATTGCCTTAAAAATGGGTGAGTCCCAGCCTCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR GCA 90 bp | TTGAAATCACCCGGGGTCTTCCAGATCCTGGGCCTTAAGTGCTTCAGGACCCAGTGGCCTGCCCCTGCCTaGAGAGCTCTGGGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSPGVFQILGLKCFRTQWPAPA*RALGSL Trigger: CAGGGAACCCAGAGCTCTGCAGGCAGGGGCAGGCCA...CTGGGTCCTGAAGCACTTAAGGCCCAGGATCTGGAAGACCCCGGGTGATTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CCA 90 bp | TTGAAATCACCCGGGGTCTTCCAGATCCTGGGCCTTAAGTGCTTCAGGACCCAGGTTGAAGGAGGGGTTTaGGGAAGCTGGTCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LKSPGVFQILGLKCFRTQVEGGV*GSWSLA Trigger: GGCCAATGACCAGCTTCCCCAAACCCCTCCTTCAAC...CTGGGTCCTGAAGCACTTAAGGCCCAGGATCTGGAAGACCCCGGGTGATTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR GCA 90 bp | TTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGGGCCTTAAGTGCTTCAGGGAGCTCTGGGTTCCCTaGTCTAACTTGGCCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: LGLKSPGVFQILGLKCFRELWVP*SNLAHP Trigger: GGGATGGGCCAAGTTAGAGCAGGGAACCCAGAGCTC...CCTGAAGCACTTAAGGCCCAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR GCA 90 bp | CAGGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGTCATTGGCCTGCCCCTaGCTGCAGAGCTCTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QERTGSLGLKSPGVFQILSLACP*LQSSGF Trigger: GAACCCAGAGCTCTGCAGGCAGGGGCAGGCCAATGA...CAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR GCA 90 bp | GGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGGGATCCTGGGCCTTAAGTaGTTCAGGACCCAGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKDWIIRFEITRGLPDPGILGLK*FRTQKG Trigger: ACCCTTCTGGGTCCTGAAGCACTTAAGGCCCAGGAT...CCCAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGTTCCCTGCTCTAACTTaGCCCATCCCCCAGATTCGC | + |
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Preference number: 4 (lower is better) Translates to: QERTGSLGLKSPGVFQILFPALT*PIPQIR Trigger: GCGAATCTGGGGGATGGGCCAAGTTAGAGCAGGGAA...CAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CCA 90 bp | GGCAGGAGACCTAGGTTCACATTCCAGCTTTGTTCCCAACACTATCTGGTAACCCTGCCTGCAGAGCTCTaGGTTCCCTGCTCTAACTTG | + |
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Preference number: 4 (lower is better) Translates to: GRRPRFTFQLCSQHYLVTLPAEL*VPCSNL Trigger: CAAGTTAGAGCAGGGAACCCAGAGCTCTGCAGGCAG...GGTTACCAGATAGTGTTGGGAACAAAGCTGGAATGTGAACCTAGGTCTCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CCA 90 bp | TTGAAATCACCCGGGGTCTTCCAGATCCTGGGCCTTAAGTGCTTCAGGACCCAGTTGGTAATAAGAGGCTaGGACTCACCCATTTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LKSPGVFQILGLKCFRTQLVIRG*DSPIFK Trigger: CTTAAAAATGGGTGAGTCCCAGCCTCTTATTACCAA...CTGGGTCCTGAAGCACTTAAGGCCCAGGATCTGGAAGACCCCGGGTGATTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGCCTGCAGGAAAGGACTaGATCATTAGGTTTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: QERTGSLGLKSPGVFQILPAGKD*IIRFEI Trigger: GATTTCAAACCTAATGATCCAGTCCTTTCCTGCAGG...CAGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS CCA 90 bp | AGTCTTCACAGCCGGACAGGGGGCAAATCCCTGACACAGCAGTTCTaGGGAAGGCTAGGGAAGCTCTGGGCTACCCCTGCAGGAAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SLHSRTGGKSLTQQF*GRLGKLWATPAGKD Trigger: GTCCTTTCCTGCAGGGGTAGCCCAGAGCTTCCCTAGCCTTCCCCAGAACTGCTGTGTCAGGGATTTGCCCCCTGTCCGGCTGTGAAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568370.1 |
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| CDS-3UTR CAA 90 bp | GCAGGAAAGGACTGGATCATTAGGTTTGAAATCACCCGGGGTCTTCCAGATCCTGTTCCCTGCTCTAACTaGGCCCATCCCCCAGATTCG | + |
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Preference number: 5 (lower is better) Translates to: AGKDWIIRFEITRGLPDPVPCSN*AHPPDS Trigger: CGAATCTGGGGGATGGGCCAAGTTAGAGCAGGGAAC...AGGATCTGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS-3UTR CAA 90 bp | TTGAAATCACCCGGGGTCTTCCAGATCCTGGGCCTTAAGTGCTTCAGGACCCAGACTGGATCATTAGGTTaGAAATCACCCGGGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LKSPGVFQILGLKCFRTQTGSLG*KSPGVF Trigger: GAAGACCCCGGGTGATTTCAAACCTAATGATCCAGT...CTGGGTCCTGAAGCACTTAAGGCCCAGGATCTGGAAGACCCCGGGTGATTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562939.1 |
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| CDS CCA 72 bp | CTAGGGAAGCTCTGGGCTACCCCTGCAGGAAAGGACTaGATCATTAGGTTTGAAATCACCCGGGGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGKLWATPAGKD*IIRFEITRGLP Trigger: TGGAAGACCCCGGGTGATTTCAAACCTAATGATCCAGTCCTTTCCTGCAGGGGTAGCCCAGAGCTTCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568370.1 |
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