RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MSRB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000174099

Ensembl transcript IDs: ENST00000308259.10, ENST00000355192.8, ENST00000446731.2, ENST00000535143.1, ENST00000535239.5, ENST00000535664.5, ENST00000538045.5, ENST00000538725.1, ENST00000540804.5, ENST00000541189.5, ENST00000541897.5, ENST00000614640.4, ENST00000642404.1, ENST00000642411.1, ENST00000645872.1, ENST00000646299.1, ENST00000647481.1

Found 717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCCCGCGTCCCACGGACCCCAGGGGAGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTGTGTGTGCCTCTGAAGGATGGGCTG +
Preference number: 1 (lower is better)
Translates to: VARVPRTPGEAILQS*SSREVLCVPLKDGL
Trigger: CAGCCCATCCTTCAGAGGCACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCCGTGGGACGCGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp GGGTCTGTGCAAAGGCCTCAAGGCCATGTGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATC +
Preference number: 1 (lower is better)
Translates to: GSVQRPQGHVSCRSP*PALPSSGLYTAEEI
Trigger: GATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTTGCACAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp ACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAAGCCCTGAGAGACCTATTTCTTTGG +
Preference number: 1 (lower is better)
Translates to: TELEQPRGAVCASEG*AGGCGKALRDLFLW
Trigger: CCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACACACAGCACCTCTCGGCTGCTCCAGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp GGATGGGCTGGAGGCTGTGGCAAAGCCCTGAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATCCTGGGGTCACTGGGAAATACTAGG +
Preference number: 1 (lower is better)
Translates to: GWAGGCGKALRDLFL*PPQRGILGSLGNTR
Trigger: CCTAGTATTTCCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGCCTCCAGCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 90 bp AACAATGACAATCCAGTCTCTGTGGAGAGGGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCAACACTGTGGCCCGCGTCCCACGGA +
Preference number: 1 (lower is better)
Translates to: NNDNPVSVEREEASH*SSLSTSTLWPASHG
Trigger: TCCGTGGGACGCGGGCCACAGTGTTGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTCCCTCTCCACAGAGACTGGATTGTCATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp TGTGCAAAGGCCTCAAGGCCATGTGTCTTGCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTAT +
Preference number: 1 (lower is better)
Translates to: CAKASRPCVLQVSMP*TAQLWSLHCRGDLY
Trigger: ATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp CTTATCTTAGGTGGGTCTGTGCAAAGGCCTCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCACTGCCCAGCTCTGGTCTCTACACT +
Preference number: 1 (lower is better)
Translates to: LILGGSVQRPQGHVS*RSPCPALPSSGLYT
Trigger: AGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTTGCACAGACCCACCTAAGATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp AAAGGCCTCAAGGCCATGTGTCTTGCAGGTCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCA +
Preference number: 1 (lower is better)
Translates to: KGLKAMCLAGLHALH*PALVSTLQRRSLFS
Trigger: TGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp AAGCTGAACAGTCTCATTAAAACATCACTCCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCAAGGCCATGTGTCTTGCAGGTCTCC +
Preference number: 1 (lower is better)
Translates to: KLNSLIKTSLQPYLR*VCAKASRPCVLQVS
Trigger: GGAGACCTGCAAGACACATGGCCTTGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTGGAGTGATGTTTTAATGAGACTGTTCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp AAGCCCTACGATATAAATGAAGGAACAATGACAATCCAGTCTCTGTaGAGAGGGAAGAGGCCTCTCACTGATCCTCCTTGTCTACCTCAA +
Preference number: 1 (lower is better)
Translates to: KPYDINEGTMTIQSL*RGKRPLTDPPCLPQ
Trigger: TTGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTCCCTCTCCACAGAGACTGGATTGTCATTGTTCCTTCATTTATATCGTAGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp CCACTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCAGTACCCAAGACTTCATCCTTGATC +
Preference number: 1 (lower is better)
Translates to: PLGFCLLLVLPCQFF*PALNFSVPKTSSLI
Trigger: GATCAAGGATGAAGTCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp ATAGAAACCTCTTATCTGAGCATCCAGATAAGACCAGAGCTCATCTaGAATCAAGTGTACATGACTATAAAGAGTCCACCGGGATGTCAG +
Preference number: 1 (lower is better)
Translates to: IETSYLSIQIRPELI*NQVYMTIKSPPGCQ
Trigger: CTGACATCCCGGTGGACTCTTTATAGTCATGTACACTTGATTCCAGATGAGCTCTGGTCTTATCTGGATGCTCAGATAAGAGGTTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 90 bp TGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTTaGGCTTCCGTTTTAGCTTTCCATGTGAATGCCCATGTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: WLVLCHTEDYVEYET*ASVLAFHVNAHVSP
Trigger: TGGAGAGACATGGGCATTCACATGGAAAGCTAAAACGGAAGCTCAAGTTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 90 bp GGTGCTTGTAGAGAGAGACATGTAGGAATGTGGACATGGCCACACTaGCGCTGTTTGTCACAGATTTTCATTCTAATTTCTTGTTGTTTC +
Preference number: 1 (lower is better)
Translates to: GACRERHVGMWTWPH*RCLSQIFILISCCF
Trigger: GAAACAACAAGAAATTAGAATGAAAATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCACATTCCTACATGTCTCTCTCTACAAGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 90 bp TGTGGTAATGTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTaGATCTGGCAACAATTTAACATAAGGAAAGACTTTAGACCTTCA +
Preference number: 1 (lower is better)
Translates to: CGNVYFSATTLSMPL*IWQQFNIRKDFRPS
Trigger: TGAAGGTCTAAAGTCTTTCCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAACATTACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 90 bp ATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCAATGTTaGCTTACATCACCATTGTTTATACTTGTGAAAACTTTATTGTGC +
Preference number: 1 (lower is better)
Translates to: IRHTPYNLHTWLQQC*LTSPLFILVKTLLC
Trigger: GCACAATAAAGTTTTCACAAGTATAAACAATGGTGATGTAAGTCAACATTGCTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 90 bp ACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTaGCATATTGACTCAGTTCATTGCACTCCATATCCTGCAAAAATA +
Preference number: 1 (lower is better)
Translates to: TSYVKWHNSHRSHTP*HIDSVHCTPYPAKI
Trigger: TATTTTTGCAGGATATGGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATGGTCTCCATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATGGAGACCAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTATGGTCTCCATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATGGAGACCAT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCCCAACGTGGAATCCTaGGGTCACTGGGAAATACTA +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVPNVES*GHWEIL
Trigger: TAGTATTTCCCAGTGACCCCAGGATTCCACGTTGGG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTTTATTGTGCACAGTaGCATCCATTCCGCCAGACT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLYCAQ*HPFRQT
Trigger: AGTCTGGCGGAATGGATGTCACTGTGCACAATAAAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATC +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVRDLFL*PPQRGI
Trigger: GATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CAA 90 bp CCTTATCTTAGGTGGGTCTGTGCAAAGGCCTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGCACTGCCCAGCTCTGGTCTCTACAC +
Preference number: 2 (lower is better)
Translates to: PYLRWVCAKASRPCV*QVSMPCTAQLWSLH
Trigger: GTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTTGCACAGACCCACCTAAGATAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCTCTCTCTCATTCCTaGTGCCTTGATGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCALSHS*CLDEVC
Trigger: ACACACTTCATCAAGGCAGCAGGAATGAGAGAGAGC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAAGGGCCACCCCACTTaGATTCTGTTTGTTACTTGT +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVKGHPT*ILFVTC
Trigger: ACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGGAAATTCTGGCTCTTaGCCCAACTGTTTCCATACC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCGNSGS*PNCFHT
Trigger: GGTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCCAAACCTACAAACATaGTGTACATTCGTCACACAC +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVPNLQT*CTFVTH
Trigger: GTGTGTGACGAATGTACATCATGTTTGTAGGTTTGG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTATTTCTAGAGAGACGTaGAGCCTACGAATTCCAGAG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCISRET*SLRIPE
Trigger: CTCTGGAATTCGTAGGCTTCACGTCTCTCTAGAAAT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCA +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCPCQFF*PALNFS
Trigger: TGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 2 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 2 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCATGGTCTCCATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATGGAGACCAT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATGGTCTCCATCTCCTaGCCTCGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQMVSIS*PRDPPA
Trigger: GGCGGGTGGATCACGAGGTCAGGAGATGGAGACCAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTGGAGTGCAGTGGCATaGTCTCGGCTAACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRWSAVA*SRLTAS
Trigger: GCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTGGAGTGCAGTGGTATaGGCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRWSAVV*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATACCACTGCACTCCA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAGCGAAGGGCTACTGGCTaGCTCTTTGTCACCAAATGC +
Preference number: 2 (lower is better)
Translates to: VIASELITSWNEGQPEPERRATG*LFVTKC
Trigger: GCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCG...CTCCGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTGGAGTGCAGTGGTATaGGCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALWSAVV*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATACCACTGCACTCCA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTGGAGTGCAGTGGTATaGGCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSWSAVV*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATACCACTGCACTCCA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGATTTGGTTTCTGACCTaGGGGAAGCCCACAGGCTCG +
Preference number: 2 (lower is better)
Translates to: NVIASELITSWNEGQPEPIWFLT*GKPTGS
Trigger: CGAGCCTGTGGGCTTCCCTCAGGTCAGAAACCAAAT...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTACATTACTTGTATACAGCCACTaGACTCCAGCCTGGGTAACA +
Preference number: 2 (lower is better)
Translates to: RLSQEDHISPGVEGCSTLLVYSH*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAGTGGCTGTATACAAG...TAATGTACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
3UTR-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCCAAACCTACAAACATaGTGTACATTCGTCACACAC +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMPNLQT*CTFVTH
Trigger: GTGTGTGACGAATGTACATCATGTTTGTAGGTTTGG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCA +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMPCQFF*PALNFS
Trigger: TGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGTTTGTTACTTGTACTaGCCTGTCAGTTTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMVCYLY*PVSFSA
Trigger: GGCAGAAAAACTGACAGGGCAGTACAAGTAACAAAC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: RVHRDVRLLREVLVERDMSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFAILQS*SSREVL
Trigger: CAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCTTTATTGTGCACAGTaGCATCCATTCCGCCAGACT +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSLYCAQ*HPFRQT
Trigger: AGTCTGGCGGAATGGATGTCACTGTGCACAATAAAG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGGAAATTCTGGCTCTTaGCCCAACTGTTTCCATACC +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQGNSGS*PNCFHT
Trigger: GGTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTATTTCTAGAGAGACGTaGAGCCTACGAATTCCAGAG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPISRET*SLRIPE
Trigger: CTCTGGAATTCGTAGGCTTCACGTCTCTCTAGAAAT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGTTTGTTACTTGTACTaGCCTGTCAGTTTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSVCYLY*PVSFSA
Trigger: GGCAGAAAAACTGACAGGGCAGTACAAGTAACAAAC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAAGGGCCACCCCACTTaGATTCTGTTTGTTACTTGT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPKGHPT*ILFVTC
Trigger: ACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 2 (lower is better)
Translates to: SWNLREHLDAQIETSYLSRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCAAATGTCTTGGAACCTaGGGGAACATCTGGATGCTC +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFKCLGT*GNIWML
Trigger: GAGCATCCAGATGTTCCCTCAGGTTCCAAGACATTT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGCTCTCTCTCATTCCTaGTGCCTTGATGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFALSHS*CLDEVC
Trigger: ACACACTTCATCAAGGCAGCAGGAATGAGAGAGAGC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCA +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPPCQFF*PALNFS
Trigger: TGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGTTTGTTACTTGTACTaGCCTGTCAGTTTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQVCYLY*PVSFSA
Trigger: GGCAGAAAAACTGACAGGGCAGTACAAGTAACAAAC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGGAAATTCTGGCTCTTaGCCCAACTGTTTCCATACC +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFGNSGS*PNCFHT
Trigger: GGTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCATTTCTAGAGAGACGTaGAGCCTACGAATTCCAGAG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFISRET*SLRIPE
Trigger: CTCTGGAATTCGTAGGCTTCACGTCTCTCTAGAAAT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CAA 90 bp TCCCAGTTTATGCATGAAGAAATAGGCACAGAGAGGCTACATGGCTaGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTTGAG +
Preference number: 2 (lower is better)
Translates to: SQFMHEEIGTERLHG*SFVTQKIMLSMKLE
Trigger: CTCAAGTTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTGCCTATTTCTTCATGCATAAACTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 2 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTTTTATTTTACACAGTaGAATTTGTGCCCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPFYFTQ*NLCPSS
Trigger: GCTGGAAGGGCACAAATTCCACTGTGTAAAATAAAA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 2 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CAA 90 bp CATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCAATGTaGACTTACATCACCATTGTTTATACTTGTGAAAACTTTATTGTG +
Preference number: 2 (lower is better)
Translates to: HSSHTIQPSHLATAM*TYITIVYTCENFIV
Trigger: CACAATAAAGTTTTCACAAGTATAAACAATGGTGATGTAAGTCAACATTGCTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTC +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFNKSSA*QLTLLL
Trigger: GAGCAATAATGTCAGCTGTCAAGCACTAGATTTATT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp GTCCCACGGACCCCAGGGGAGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTGTGTGTGCCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: VPRTPGEAILQS*SSREVLCVPLK
Trigger: CTTCAGAGGCACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCCGTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 72 bp AGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCCTCTaGAGGATGGGCTGGAGGCTGTGGCAAAGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: RAGAAERCCVCL*RMGWRLWQSPE
Trigger: CTCAGGGCTTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACACACAGCACCTCTCGGCTGCTCCAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 3 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 72 bp GCCTCAAGGCCATGTGTCTTGCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCTCTACACTGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: ASRPCVLQVSMP*TAQLWSLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 3 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 3 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 72 bp CAAAGGCCTCAAGGCCATGTGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCTGGTCTCTACACTGCA +
Preference number: 3 (lower is better)
Translates to: QRPQGHVSCRSP*PALPSSGLYTA
Trigger: TGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTTGAGGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp GGAGGCTGTGGCAAAGCCCTGAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATCCTGGGGTCACTGGGA +
Preference number: 3 (lower is better)
Translates to: GGCGKALRDLFL*PPQRGILGSLG
Trigger: TCCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 3 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 72 bp CCTCTGAAGGATGGGCTGGAGGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGCCACCCCAACGTGGAA +
Preference number: 3 (lower is better)
Translates to: PLKDGLEAVAKP*ETYFFGHPNVE
Trigger: TTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGCCTCCAGCCCATCCTTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 72 bp AATCCAGTCTCTGTGGAGAGGGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCAACACTGTGGCCCGCG +
Preference number: 3 (lower is better)
Translates to: NPVSVEREEASH*SSLSTSTLWPA
Trigger: CGCGGGCCACAGTGTTGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTCCCTCTCCACAGAGACTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 72 bp AAGGCCATGTGTCTTGCAGGTCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACACTGCAGAGGAGATCT +
Preference number: 3 (lower is better)
Translates to: KAMCLAGLHALH*PALVSTLQRRS
Trigger: AGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGACACATGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp CCTGAGGGAAGCCCACAGGCTCGAAGGGCTACTGGCTaGCTCTTTGTCACCAAATGCAGCAGGTTGAATGCA +
Preference number: 3 (lower is better)
Translates to: PEGSPQARRATG*LFVTKCSRLNA
Trigger: TGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCCTGTGGGCTTCCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 3 (lower is better)
Translates to: RVHRDVRLLREVLVERDMHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTCTATTTTCATGTTaGAAGACCATGAACCCTCTG +
Preference number: 3 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSLFSC*KTMNPL
Trigger: CAGAGGGTTCATGGTCTTCAAACATGAAAATAGAGA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 3 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR GCA 72 bp TTGAGATGGAGTGTCACATTGTCATGTAGGCTGGAGTaGAGTGGCATGATCTCGGCTAACTGCAAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: LRWSVTLSCRLE*SGMISANCKLR
Trigger: GCGGAGCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCAGCCTACATGACAATGTGACACTCCATCTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp GTCTTGCAGGTCTCCATGCCCTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGAGATCTCTATTTTCAT +
Preference number: 3 (lower is better)
Translates to: VLQVSMPCTAQL*SLHCRGDLYFH
Trigger: ATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 3 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SWNLREHLDAQIETSYLSSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 3 (lower is better)
Translates to: SRASQSKTSRVATKGNSGHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 3 (lower is better)
Translates to: RVHRDVRLLREVLVERDMPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 3 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 72 bp CACATAAGCCCAGGAGTTGAGGGCTGCAGTACATTATaGTTGTGCTTGTATACAGCCACTGCACTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: HISPGVEGCSTL*LCLYTATALQP
Trigger: AGGCTGGAGTGCAGTGGCTGTATACAAGCACAATCATAATGTACTGCAGCCCTCAACTCCTGGGCTTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
3UTR GCA 72 bp GCTCGAAGGGCTACTGGCTGGCTCTTTGTCACCAAATaGAGCAGGTTGAATGCAGACATCACTGTGATATCT +
Preference number: 3 (lower is better)
Translates to: ARRATGWLFVTK*SRLNADITVIS
Trigger: AGATATCACAGTGATGTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 3 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 3 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: SWNLREHLDAQIETSYLSPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: RVHRDVRLLREVLVERDMDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 3 (lower is better)
Translates to: NVIASELITSWNEGQPEPTKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 3 (lower is better)
Translates to: SWNLREHLDAQIETSYLSPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp AGTCTCATTAAAACATCACTCCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCAAGGCCATGTGTCTTG +
Preference number: 3 (lower is better)
Translates to: SLIKTSLQPYLR*VCAKASRPCVL
Trigger: CAAGACACATGGCCTTGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTGGAGTGATGTTTTAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 3 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 3 (lower is better)
Translates to: SRASQSKTSRVATKGNSGPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 3 (lower is better)
Translates to: SWNLREHLDAQIETSYLSVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGCTTTCTCTGTGAGATaGGGAAAGACTTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPAFSVR*GKTSRM
Trigger: CATCCTAGAAGTCTTTCCCAATCTCACAGAGAAAGC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 3 (lower is better)
Translates to: LNGITPTDHIHLAILTQFERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp TCTGTGAATGTGATTGCCTCAGAATTGATCACATCGTaGAATGAAGGCCAACCTGAACCGGAGTCAAATTTG +
Preference number: 3 (lower is better)
Translates to: SVNVIASELITS*NEGQPEPESNL
Trigger: CAAATTTGACTCCGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATTCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 3 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 3 (lower is better)
Translates to: SRASQSKTSRVATKGNSGQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: LNGITPTDHIHLAILTQFPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: SWNLREHLDAQIETSYLSDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CCA 72 bp TCTTATCTGAGCATCCAGATAAGACCAGAGCTCATCTaGAATCAAGTGTACATGACTATAAAGAGTCCACCG +
Preference number: 3 (lower is better)
Translates to: SYLSIQIRPELI*NQVYMTIKSPP
Trigger: CGGTGGACTCTTTATAGTCATGTACACTTGATTCCAGATGAGCTCTGGTCTTATCTGGATGCTCAGATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 3 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp ATAGGAAAAGTCATCTGTGAATGTGATTGCCTCAGAATTGATCACATCGTGGAAGAACCGGAGTCAAATTaGGTTTCTGACCTGAGGGAA +
Preference number: 3 (lower is better)
Translates to: IGKVICECDCLRIDHIVEEPESN*VSDLRE
Trigger: TTCCCTCAGGTCAGAAACCAAATTTGACTCCGGTTC...TTCCACGATGTGATCAATTCTGAGGCAATCACATTCACAGATGACTTTTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541897.5
3UTR GCA 72 bp TTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCAGTACCCAAGACTTCA +
Preference number: 3 (lower is better)
Translates to: FCLLLVLPCQFF*PALNFSVPKTS
Trigger: TGAAGTCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 3 (lower is better)
Translates to: LNGITPTDHIHLAILTQFVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: LNGITPTDHIHLAILTQFDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR TCA 72 bp TTGCACTCCATATCCTGCAAAAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTCACTGACGTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: LHSISCKNKSSA*QLTLLLTDVLV
Trigger: TACTAAAACGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTACACGACCCGGACTaGGCACTTCCCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLHDPD*ALPRAA
Trigger: CGCGGCTCTGGGAAGTGCGCAGTCCGGGTCGTGTAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355192.8
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTACCTCAACACTGTaGCCCGCGTCCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSTSTL*PASHGP
Trigger: GGGTCCGTGGGACGCGGGCCACAGTGTTGAGGTAGA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTCTACCTCAACACTGTaGCCCGCGTCCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCSTSTL*PASHGP
Trigger: GGGTCCGTGGGACGCGGGCCACAGTGTTGAGGTAGA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATGACGGGAAATTCCTaGGCACGGGCAGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVMTGNS*ARAAES
Trigger: GGACTCGGCTGCCCGTGCCCAGGAATTTCCCGTCAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355192.8
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVAILQS*SSREVL
Trigger: CAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGWRPH*LPRRCH
Trigger: GTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGTCCGCCGCGGGCTCATaGAAAGGCCAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASSDPPHLALSKYGITGLSAAGS*KGQAAA
Trigger: GGCGGCTGCCTGGCCTTTCCATGAGCCCGCGGCGGA...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGGCTCGAAGGGCTACTaGCTGGCTCTTTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVGSKGY*LALCHQ
Trigger: TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVEEASH*SSLSTS
Trigger: TGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCTCGGGCCCGTTATCTaGGCGGCAACCCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMLGPVI*AATPAG
Trigger: CCCTGCCGGGGTTGCCGCTCAGATAACGGGCCCGAG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTCCGCCGCGGGCTCATaGAAAGGCCAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMSAAGS*KGQAAA
Trigger: GGCGGCTGCCTGGCCTTTCCATGAGCCCGCGGCGGA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308259.10
ENST00000355192.8
CDS-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCEEASH*SSLSTS
Trigger: TGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGCTACACGACCCGGACTaGGCACTTCCCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ASSDPPHLALSKYGITGLLHDPD*ALPRAA
Trigger: CGCGGCTCTGGGAAGTGCGCAGTCCGGGTCGTGTAG...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CCA 90 bp GTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAGTCCGCCGCGGGCTCATaGAAAGGCCAGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VIASELITSWNEGQPEPESAAGS*KGQAAA
Trigger: GGCGGCTGCCTGGCCTTTCCATGAGCCCGCGGCGGA...CTCCGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCCTACCAACCACGGTaGCCATCTGGCTTATGTCAA +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCAYQPR*PSGLCQ
Trigger: TTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642404.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGGGCCCGCTGGAGTCTaGCCCAGCAGCGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRGPAGV*PSSGAA
Trigger: TGCTGCCCCGCTGCTGGGCCAGACTCCAGCGGGCCC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR GCA 90 bp AAGGGCTACTGGCTGGCTCTTTGTCACCAAATGCAGCAGGTTGAATGCAGACATGGGGCAAGAGCGGACTaGGCACTTCCCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: KGYWLALCHQMQQVECRHGARAD*ALPRAA
Trigger: CGCGGCTCTGGGAAGTGCGCAGTCCGCTCTTGCCCC...ATGTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTGCCTCCCTCGGCGGTaGCACTGCTATCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMCLPRR*HCYPQV
Trigger: CACCTGCGGATAGCAGTGGCACCGCCGAGGGAGGCA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSGWRPH*LPRRCH
Trigger: GTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKGWRPH*LPRRCH
Trigger: GTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCGGCCCCTCACCGCTaGCGCGGGGCGCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSAPHR*RGAQPF
Trigger: GAAGGGTTGCGCCCCGCGCCAGCGGTGAGGGGCCGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614640.4
CDS-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGCAGTGATGTCACTCTaGCAAACTCGGGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCAVMSL*QTRGSV
Trigger: AACAGAACCCCGAGTTTGCCAGAGTGACATCACTGC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642404.1
3UTR CAA 72 bp TGGAGGCTGTGGCAAAGCCCTGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAATCCTGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: WRLWQSPERPIS*ATPTWNPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTACACCTTGCCATATTaGCTCAGTTCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVYTLPY*LSSLHS
Trigger: GGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AATTTGGTTTCTGACCTGAGGGAAGCCCACAGGCTCGAAGGGCTACTGGCTGGCATTTGGTTTCTGACCTaGGGGAAGCCCACAGGCTCG +
Preference number: 4 (lower is better)
Translates to: NLVSDLREAHRLEGLLAGIWFLT*GKPTGS
Trigger: CGAGCCTGTGGGCTTCCCTCAGGTCAGAAACCAAAT...GCCAGCCAGTAGCCCTTCGAGCCTGTGGGCTTCCCTCAGGTCAGAAACCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTCTTTGTCACCAAATaGAGCAGGTTGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLFVTK*SRLNAD
Trigger: GTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTCCGCTTTGTCTGCCTaGGCCGGGCTGGCGACCCCA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSALSA*AGLATP
Trigger: TGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAGATCCCTCTCTCCTaGGCCCGCGCGGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQIPLS*ARAGRE
Trigger: CTCTCGCCCCGCGCGGGCCCAGGAGAGAGGGATCTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR TCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTACACCTTGCCATATTaGCTCAGTTCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCYTLPY*LSSLHS
Trigger: GGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAGGATAAGGTGTCAGTaGGGCTGCCAGACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMRIRCQ*GCQTPP
Trigger: GGGAGGCGTCTGGCAGCCTCACTGACACCTTATCCT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTTCGATTTTGGCCTGTaGAATGCCAGGCGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMFDFGL*NARRAR
Trigger: GCGGGCCCGCCTGGCATTTCACAGGCCAAAATCGAA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGGCAGCCGAATTTATaGAGTATCTTTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVRQPNL*SIFSQL
Trigger: CAACTGGGAAAAGATACTGCATAAATTCGGCTGCCT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTGCCTCCCTCGGCGGTaGCACTGCTATCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRCLPRR*HCYPQV
Trigger: CACCTGCGGATAGCAGTGGCACCGCCGAGGGAGGCA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVPCQFF*PALNFS
Trigger: TGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGTTTGTTACTTGTACTaGCCTGTCAGTTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVVCYLY*PVSFSA
Trigger: GGCAGAAAAACTGACAGGGCAGTACAAGTAACAAAC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTGCCTCCCGCGGGCTaGCCCGCCAGATCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLPPAG*PARSLS
Trigger: AGAGAGGGATCTGGCGGGGCAGCCCGCGGGAGGCAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGTATCTTTTCCCAGTTaGACGAGGCCCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCVSFPS*TRPIIK
Trigger: TTTGATGATGGGCCTCGTCCAACTGGGAAAAGATAC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTCCGCTTTGTCTGCCTaGGCCGGGCTGGCGACCCCA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSSALSA*AGLATP
Trigger: TGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCGAAAAGCGCAGGCCTaGCGGGCCGGTTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQRKAQA*RAGSHA
Trigger: GGCGTGGGAACCGGCCCGCCAGGCCTGCGCTTTTCG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGATGGTCTGGACGCTaGTGGCTGAGGTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGWSGR*WLRSGL
Trigger: AAGACCAGACCTCAGCCATCAGCGTCCAGACCATCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGGGCGGCGGGAGGCATaGCGGGAAATTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGGRREA*REIPGH
Trigger: GTGCCCAGGAATTTCCCGTCATGCCTCCCGCCGCCC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355192.8
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGGGGCAAGAGCGGACTaGGCACTTCCCAGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGGARAD*ALPRAA
Trigger: CGCGGCTCTGGGAAGTGCGCAGTCCGCTCTTGCCCC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308259.10
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFGWRPH*LPRRCH
Trigger: GTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKGWRPH*LPRRCH
Trigger: GTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGGGGCGCAACCCTTCTaGTCCCCTTCTCGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSGAQPF*SPSRLR
Trigger: CCTCAGCCGAGAAGGGGAGCAGAAGGGTTGCGCCCC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614640.4
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCCGCTTTGTCTGCCTaGGCCGGGCTGGCGACCCCA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSALSA*AGLATP
Trigger: TGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCCGCTTTGTCTGCCTaGGCCGGGCTGGCGACCCCA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSALSA*AGLATP
Trigger: TGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTCCGCTTTGTCTGCCTaGGCCGGGCTGGCGACCCCA +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFSALSA*AGLATP
Trigger: TGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMAILQS*SSREVL
Trigger: CAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTCTACCTCAACACTGTaGCCCGCGTCCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSTSTL*PASHGP
Trigger: GGGTCCGTGGGACGCGGGCCACAGTGTTGAGGTAGA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTGTACCAGGCAGCCTaGGCGCCTACCAACCACGGT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLYQAA*APTNHG
Trigger: ACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642404.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTGGAGTGCAGTGGCATaGTCTCGGCTAACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMWSAVA*SRLTAS
Trigger: GCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTGCCTCCCTCGGCGGTaGCACTGCTATCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQCLPRR*HCYPQV
Trigger: CACCTGCGGATAGCAGTGGCACCGCCGAGGGAGGCA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATTGACTCAGTTCATTaGACTCCATATCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVIDSVH*TPYPAK
Trigger: TTTTGCAGGATATGGAGTGCAATGAACTGAGTCAAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCAAATTTGGTTTCTGACCTGAGGGAAGCCCACAGGCTCGAAGGGCTACTGGCTCGAAGGGCTACTGGCTaGCTCTTTGTCACCAAATGC +
Preference number: 4 (lower is better)
Translates to: SNLVSDLREAHRLEGLLARRATG*LFVTKC
Trigger: GCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCG...AGCCAGTAGCCCTTCGAGCCTGTGGGCTTCCCTCAGGTCAGAAACCAAATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGCTCGAAGGGCTACTaGCTGGCTCTTTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGSKGY*LALCHQ
Trigger: TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTTTATTTTACACAGTaGAATTTGTGCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVFYFTQ*NLCPSS
Trigger: GCTGGAAGGGCACAAATTCCACTGTGTAAAATAAAA...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGACTTCCTATGTTAAATaGCATAACTCCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVTSYVK*HNSHRS
Trigger: TGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGGATGGTCTGGACGCTaGTGGCTGAGGTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRGWSGR*WLRSGL
Trigger: AAGACCAGACCTCAGCCATCAGCGTCCAGACCATCC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCCTCCTGGGCTCCAGTaGTTCTCCTGCTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDPPGLQ*FSCFSP
Trigger: GGGGCTGAAGCAGGAGAATCACTGGAGCCCAGGAGG...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTCATAAGCCCAGGAGTTaGGGGCTGCAGTACATTATG +
Preference number: 4 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSHKPRS*GLQYIM
Trigger: CATAATGTACTGCAGCCCTCAACTCCTGGGCTTATG...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGGGATGGTCTGGACGCTaGTGGCTGAGGTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALGWSGR*WLRSGL
Trigger: AAGACCAGACCTCAGCCATCAGCGTCCAGACCATCC...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGGATGGTCTGGACGCTaGTGGCTGAGGTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSGWSGR*WLRSGL
Trigger: AAGACCAGACCTCAGCCATCAGCGTCCAGACCATCC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGGGTTTTCAGAAAGGATaGACTCACCTGAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASSDPPHLALSKYGITGLGFQKG*THLRAA
Trigger: AGCTGCTCTCAGGTGAGTTCATCCTTTCTGAAAACC...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGATGGGATTACAGGCTTaGGCTATCATGCCGACCTTA +
Preference number: 4 (lower is better)
Translates to: ASSDPPHLALSKYGITGLMGLQA*AIMPTL
Trigger: TAAGGTCGGCATGATAGCTCAAGCCTGTAATCCCAT...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp CTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCAGTCGCTTGGCACTTCTGGCCTCAAGTaGTCCTCCCCACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LHINFVMLVCPSCDQSLGTSGLK*SSPLGP
Trigger: AGGGCCAAGTGGGGAGGATCACTTGAGGCCAGAAGT...GCCAAGCGACTGGTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGCCTCCCTCGGCGGTaGCACTGCTATCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFCLPRR*HCYPQV
Trigger: CACCTGCGGATAGCAGTGGCACCGCCGAGGGAGGCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTTTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTTTTGGCCTGTGAAATaGCAGGCGGGCCCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFFWPVK*QAGPLE
Trigger: CTCCAGCGGGCCCGCCTGGCATTTCACAGGCCAAAA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR GCA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTGTAATCCCAGCTACTTaGGAGACTGAGACTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSVIPAT*ETETES
Trigger: TGACTCAGTCTCAGTCTCGCAAGTAGCTGGGATTAC...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKAILQS*SSREVL
Trigger: CAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGTTCTGTTCGATTTTaGCCTGTGAAATGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGSVRF*PVKCQA
Trigger: CGCCTGGCATTTCACAGGCCAAAATCGAACAGAACC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
3UTR CAA 72 bp GCTCTGTGCACAAGGGCCACCCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALCTRATPLGFC*LLVLPCQFFCP
Trigger: TGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTTGTGCACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALSLSPE*HGTAGV
Trigger: CACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSSLSPE*HGTAGV
Trigger: CACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSLSPE*HGTAGV
Trigger: CACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTGGAGTGCAGTGGCATaGTCTCGGCTAACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKWSAVA*SRLTAS
Trigger: GCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCTTTATTGTGCACAGTaGCATCCATTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMLYCAQ*HPFRQT
Trigger: AGTCTGGCGGAATGGATGTCACTGTGCACAATAAAG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCTTGCAGGTCTCCATaGCCTGCACTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSCRSP*PALPSS
Trigger: AGAGCTGGGCAGTGCAGGGCATGGAGACCTGCAAGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGGCTCGAAGGGCTACTaGCTGGCTCTTTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKGSKGY*LALCHQ
Trigger: TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGGCTCGAAGGGCTACTaGCTGGCTCTTTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: NVIASELITSWNEGQPEPGSKGY*LALCHQ
Trigger: TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCC...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGAAATTCTGGCTCTTaGCCCAACTGTTTCCATACC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGNSGS*PNCFHT
Trigger: GGTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGCTATCCTACAGAGCTaGAGCAGCCGAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQAILQS*SSREVL
Trigger: CAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTCTACCTCAACACTGTaGCCCGCGTCCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFSTSTL*PASHGP
Trigger: GGGTCCGTGGGACGCGGGCCACAGTGTTGAGGTAGA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATCTACCTCAACACTGTaGCCCGCGTCCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKSTSTL*PASHGP
Trigger: GGGTCCGTGGGACGCGGGCCACAGTGTTGAGGTAGA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGACCACGGTGGCCATCTaGCTTATGTCAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKTTVAI*LMSKPA
Trigger: CGCTGGCTTTGACATAAGCCAGATGGCCACCGTGGT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642404.1
3UTR CAA 72 bp CCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTaGAGCTATCATGCCGACCTTAACATTCCACTAGAC +
Preference number: 4 (lower is better)
Translates to: PHLALSKYGITG*SYHADLNIPLD
Trigger: GTCTAGTGGAATGTTAAGGTCGGCATGATAGCTCAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDSLSPE*HGTAGV
Trigger: CACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGA...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTGGAGTGCAGTGGCATaGTCTCGGCTAACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPWSAVA*SRLTAS
Trigger: GCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTGGAGTGCAGTGGTATaGGCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGWSAVV*AQLTAT
Trigger: GGTTGCAGTGAGCTGAGCTCATACCACTGCACTCCA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKEEASH*SSLSTS
Trigger: TGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCAGGAAGAGAGGCAGTaGTGTCACTCTGGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALQEERQ*CHSGKL
Trigger: GAGTTTGCCAGAGTGACATCACTGCCTCTCTTCCTG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642404.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCAGGTCTCCATGCCCTaGACTGCCCAGCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFQVSMP*TAQLWS
Trigger: AGACCAGAGCTGGGCAGTGCAGGGCATGGAGACCTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGGCTCGAAGGGCTACTaGCTGGCTCTTTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQGSKGY*LALCHQ
Trigger: TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGTATCTTTTCCCAGTTaGACGAGGCCCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMVSFPS*TRPIIK
Trigger: TTTGATGATGGGCCTCGTCCAACTGGGAAAAGATAC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATTGGCCACCCCAACGTaGAATCCTGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLATPT*NPGVTG
Trigger: CCCAGTGACCCCAGGATTCCACGTTGGGGTGGCCAA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTGTTATTGGTCAGGTATaGGTATTCTATTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSVIGQV*VFYWWP
Trigger: TGGCCACCAATAGAATACCCATACCTGACCAATAAC...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR TCA 90 bp AACATAGGCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: NIGIHRTSYKLRHACLSFSVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...GAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGCCTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTTCAAGCGATTCTCCTaGCTGAGCCTCAGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGFKRFS*LSLRSS
Trigger: GCTACTCCTGAGGCTCAGTCAGGAGAATCGCTTGAA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGAAATGTCTTGGAACCTaGGGGAACATCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRKCLGT*GNIWML
Trigger: GAGCATCCAGATGTTCCCTCAGGTTCCAAGACATTT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCACCCAGGGCCTGGGGTaGAATGTCTTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFTQGLG*NVLEPE
Trigger: CTCAGGTTCCAAGACATTTCACCCCAGGCCCTGGGT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGEEASH*SSLSTS
Trigger: TGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTACATTAGGCTGCAGTACATTATaGTTGTGCTTGTATACAGCC +
Preference number: 4 (lower is better)
Translates to: RLSQEDHISPGVEGCSTLGCSTL*LCLYTA
Trigger: GGCTGTATACAAGCACAATCATAATGTACTGCAGCC...TAATGTACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR GCA 90 bp CTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCAGTCGCTTGGCCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: LHINFVMLVCPSCDQSLGRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...GCCAAGCGACTGGTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTCCATGCCCTGCACTaGCCAGCTCTGGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLHALH*PALVST
Trigger: TGTAGAGACCAGAGCTGGGCAGTGCAGGGCATGGAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGCTCTCTCTCATTCCTaGTGCCTTGATGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRALSHS*CLDEVC
Trigger: ACACACTTCATCAAGGCAGCAGGAATGAGAGAGAGC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGAGGGAACATCTGGATaGTCAGATAGAAACCTCTTA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMEGTSG*SDRNLL
Trigger: TAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAGAGGGAAAGTCCCATaGACTTCCTATGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMRGKVP*TSYVKW
Trigger: CCATTTAACATAGGAAGTGCATGGGACTTTCCCTCT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCGAAGGGCTACTGGCTaGCTCTTTGTCACCAAATGC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPRRATG*LFVTKC
Trigger: GCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCCCAACGTGGAATCCTaGGGTCACTGGGAAATACTA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKPNVES*GHWEIL
Trigger: TAGTATTTCCCAGTGACCCCAGGATTCCACGTTGGG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRRDLFL*PPQRGI
Trigger: GATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAACAGGGGCAAGAGCTaGCAAACTCGGGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPNRGKS*QTRGSV
Trigger: AACAGAACCCCGAGTTTGCCAGCTCTTGCCCCTGTT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS-3UTR CCA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTTGGGTATTCTATTGGTaGCCAATGATTTTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSWVFYW*PMILRC
Trigger: GCACCTTAAAATCATTGGCCACCAATAGAATACCCA...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGGAGTGCAGTGGCATaGTCTCGGCTAACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFWSAVA*SRLTAS
Trigger: GCTTGCAGTTAGCCGAGATCATGCCACTGCACTCCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCTTTATTGTGCACAGTaGCATCCATTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKLYCAQ*HPFRQT
Trigger: AGTCTGGCGGAATGGATGTCACTGTGCACAATAAAG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAAATGTCTTGGAACCTaGGGGAACATCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKKCLGT*GNIWML
Trigger: GAGCATCCAGATGTTCCCTCAGGTTCCAAGACATTT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGCCCTACGATATAAATaGAGGAACAATGACAATCCA +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMALRYK*RNNDNP
Trigger: TGGATTGTCATTGTTCCTTCATTTATATCGTAGGGC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTCTTTGTCACCAAATaGAGCAGGTTGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLFVTK*SRLNAD
Trigger: GTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCGCTTCCTCAGTTCCTaGTGGGAAAAGACCACCTTA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQRFLSS*WEKTTL
Trigger: TAAGGTGGTCTTTTCCCAGCAGGAACTGAGGAAGCG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCAAGGCCATGTGTCTTaGAGGTCTCCATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFQGHVS*RSPCPA
Trigger: TGCAGGGCATGGAGACCTGCAAGACACATGGCCTTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAATGATCTCGGCTAACTaGAAGCTCCGCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKMISAN*KLRLPG
Trigger: ACCCGGAAGGCGGAGCTTGCAGTTAGCCGAGATCAT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTACATTAGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: RLSQEDHISPGVEGCSTLELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...TAATGTACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGCACTGCCCAGCTCTaGTCTCTACACTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFCTAQL*SLHCRG
Trigger: TCCTCTGCAGTGTAGAGACCAGAGCTGGGCAGTGCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCAGGCTGGAGTGCAGTaGTATGAGCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFQAGVQ*YELSSL
Trigger: CAGTGAGCTGAGCTCATACCACTGCACTCCAGCCTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCCCAACGTGGAATCCTaGGGTCACTGGGAAATACTA +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPPNVES*GHWEIL
Trigger: TAGTATTTCCCAGTGACCCCAGGATTCCACGTTGGG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKRDLFL*PPQRGI
Trigger: GATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATGTGCCTCTGAAGGATaGGCTGGAGGCTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKCASEG*AGGCGK
Trigger: TTTGCCACAGCCTCCAGCCCATCCTTCAGAGGCACA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AACATAGGCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCGTGATCCTCCCCACTTaGCCCTCTCAAAGTATGGGA +
Preference number: 4 (lower is better)
Translates to: NIGIHRTSYKLRHACLSFVILPT*PSQSMG
Trigger: TCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCAC...GAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGCCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR TCA 90 bp CCCATCATCAAAAATGTGCCCAAGGTGAGCACCACACTGAGAGCAGCTTGTTTCATGCAGACATCACTGTaGTATCTTCACCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: PIIKNVPKVSTTLRAACFMQTSL*YLHQQN
Trigger: GTTTTGTTGGTGAAGATATCACAGTGATGTCTGCAT...GAAACAAGCTGCTCTCAGTGTGGTGCTCACCTTGGGCACATTTTTGATGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTTTATTGTGCACAGTaGCATCCATTCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLYCAQ*HPFRQT
Trigger: AGTCTGGCGGAATGGATGTCACTGTGCACAATAAAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCCAAACCTACAAACATaGTGTACATTCGTCACACAC +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRPNLQT*CTFVTH
Trigger: GTGTGTGACGAATGTACATCATGTTTGTAGGTTTGG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTAAATGTCTTGGAACCTaGGGGAACATCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFKCLGT*GNIWML
Trigger: GAGCATCCAGATGTTCCCTCAGGTTCCAAGACATTT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCAAATGTCTTGGAACCTaGGGGAACATCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGKCLGT*GNIWML
Trigger: GAGCATCCAGATGTTCCCTCAGGTTCCAAGACATTT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTGGACGCTGATGGCTaGGGTCTGGTCTTAAATTTT +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLDADG*GLVLNF
Trigger: AAAATTTAAGACCAGACCTCAGCCATCAGCGTCCAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGCTGTGGCAAAGCCCTaGGAGACCTATTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKAVAKP*ETYFFG
Trigger: GCCAAAGAAATAGGTCTCTCAGGGCTTTGCCACAGC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGAAGAGGCCTCTCACTaGTCCTCCTTGTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFEEASH*SSLSTS
Trigger: TGAGGTAGACAAGGAGGATCAGTGAGAGGCCTCTTC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTC +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMNKSSA*QLTLLL
Trigger: GAGCAATAATGTCAGCTGTCAAGCACTAGATTTATT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGCTCTTTGTCACCAAATaGAGCAGGTTGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: NVIASELITSWNEGQPEPLFVTK*SRLNAD
Trigger: GTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAG...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGAGGCAGCCGAATTTATaGAGTATCTTTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRRQPNL*SIFSQL
Trigger: CAACTGGGAAAAGATACTGCATAAATTCGGCTGCCT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCACACAGTGGAATTTGTaGCCTTCCAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFTQWNL*PSSCSC
Trigger: GCAGCTGCAGCTGGAAGGGCACAAATTCCACTGTGT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAGATCACATACACCTTaGCATATTGACTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMRSHTP*HIDSVH
Trigger: ATGAACTGAGTCAATATGGCAAGGTGTATGTGATCT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGAGAGGGAAAGTCCCATaGACTTCCTATGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRRGKVP*TSYVKW
Trigger: CCATTTAACATAGGAAGTGCATGGGACTTTCCCTCT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCAAGGGCCACCCCACTTaGATTCTGTTTGTTACTTGT +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSKGHPT*ILFVTC
Trigger: ACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGAATCCTGGGGTCACTaGGAAATACTAGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPESWGH*EILGLS
Trigger: AGAAAGCCCTAGTATTTCCCAGTGACCCCAGGATTC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFRDLFL*PPQRGI
Trigger: GATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCCAAACCTACAAACATaGTGTACATTCGTCACACAC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKPNLQT*CTFVTH
Trigger: GTGTGTGACGAATGTACATCATGTTTGTAGGTTTGG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATGGACATGGCCACACTaGCGCTGTTTGTCACAGATT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKWTWPH*RCLSQI
Trigger: AATCTGTGACAAACAGCGTCAGTGTGGCCATGTCCA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATTTCTAGAGAGACGTaGAGCCTACGAATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQISRET*SLRIPE
Trigger: CTCTGGAATTCGTAGGCTTCACGTCTCTCTAGAAAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTAGGGCTTTCTCTGTaGGATTGGGAAAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLGLSL*DWERLL
Trigger: TAGAAGTCTTTCCCAATCTCACAGAGAAAGCCCTAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGCCCTACGATATAAATaGAGGAACAATGACAATCCA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRALRYK*RNNDNP
Trigger: TGGATTGTCATTGTTCCTTCATTTATATCGTAGGGC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTACACCTTGCCATATTaGCTCAGTTCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGYTLPY*LSSLHS
Trigger: GGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTACACCTTGCCATATTaGCTCAGTTCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPYTLPY*LSSLHS
Trigger: GGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCACAACCAGGAGTCCTaGAAGCAATGTATTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDHNQES*KQCIGF
Trigger: AAACCCAATACATTGCTTTCAGGACTCCTGGTTGTG...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCAGGCAGCCGAATTTATaGAGTATCTTTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSRQPNL*SIFSQL
Trigger: CAACTGGGAAAAGATACTGCATAAATTCGGCTGCCT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACCACAACACTCAGTATaGCCCTTTGGATCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKPQHSV*PFGSGN
Trigger: GTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGGTTTGTTACTTGTACTaGCCTGTCAGTTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALVCYLY*PVSFSA
Trigger: GGCAGAAAAACTGACAGGGCAGTACAAGTAACAAAC...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGAGTCAGCCTCCTCTCTaGTTCTTTCCATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALSQPPL*FFPFQM
Trigger: CATTTGAAATGGAAAGAAGCAGAGAGGAGGCTGACT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGAGGGAACATCTGGATaGTCAGATAGAAACCTCTTA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKEGTSG*SDRNLL
Trigger: TAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVHRDVRLLREVLVERDMLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCAGAGGGAAAGTCCCATaGACTTCCTATGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSRGKVP*TSYVKW
Trigger: CCATTTAACATAGGAAGTGCATGGGACTTTCCCTCT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: NVIASELITSWNEGQPEPELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGTATCTTTTCCCAGTTaGACGAGGCCCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFVSFPS*TRPIIK
Trigger: TTTGATGATGGGCCTCGTCCAACTGGGAAAAGATAC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCAATTGCAAAATACATaGATGGCCAGGGCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSQLQNT*MARASV
Trigger: AACAGAAGCCCTGGCCATCCATGTATTTTGCAATTG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCAAGGGCCACCCCACTTaGATTCTGTTTGTTACTTGT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGKGHPT*ILFVTC
Trigger: ACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACCCAACGTGGAATCCTaGGGTCACTGGGAAATACTA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKPNVES*GHWEIL
Trigger: TAGTATTTCCCAGTGACCCCAGGATTCCACGTTGGG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AACATAGGCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCGGCCCTCTCAAAGTATaGGATTACAGGCTTGAGCTA +
Preference number: 4 (lower is better)
Translates to: NIGIHRTSYKLRHACLSFGPLKV*DYRLEL
Trigger: TAGCTCAAGCCTGTAATCCCATACTTTGAGAGGGCC...GAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGCCTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CCA 90 bp AGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTACATTAGTATGGGTATTCTATTaGTGGCCAATGATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RLSQEDHISPGVEGCSTLVWVFY*WPMILR
Trigger: CCTTAAAATCATTGGCCACCAATAGAATACCCATAC...TAATGTACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGATGCAGACATCACTGTaGTATCTTCACCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALMQTSL*YLHQQN
Trigger: GTTTTGTTGGTGAAGATATCACAGTGATGTCTGCAT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGATGCAGACATCACTGTaGTATCTTCACCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKMQTSL*YLHQQN
Trigger: GTTTTGTTGGTGAAGATATCACAGTGATGTCTGCAT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNISLSPE*HGTAGV
Trigger: CACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGA...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR TCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNISVPFS*VTWYCR
Trigger: CCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGA...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTTTTCTGCCCAGCACTaGATTTTTCAGTACCCAAGA +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPFSAQH*IFQYPR
Trigger: TCTTGGGTACTGAAAAATTCAGTGCTGGGCAGAAAA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCCAAACCTACAAACATaGTGTACATTCGTCACACAC +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQPNLQT*CTFVTH
Trigger: GTGTGTGACGAATGTACATCATGTTTGTAGGTTTGG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTAGTGCTTGACAGCTaGCATTATTGCTCACTGACG +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLVLDS*HYCSLT
Trigger: CGTCAGTGAGCAATAATGTCAGCTGTCAAGCACTAG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAGGCAGCCGAATTTATaGAGTATCTTTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPRQPNL*SIFSQL
Trigger: CAACTGGGAAAAGATACTGCATAAATTCGGCTGCCT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCTCTGGTCTCTACACTaGAGAGGAGATCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLWSLH*RGDLYF
Trigger: AAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGCTCTCTCTCATTCCTaGTGCCTTGATGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKALSHS*CLDEVC
Trigger: ACACACTTCATCAAGGCAGCAGGAATGAGAGAGAGC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGAGGGAACATCTGGATaGTCAGATAGAAACCTCTTA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQEGTSG*SDRNLL
Trigger: TAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGAGGGAACATCTGGATaGTCAGATAGAAACCTCTTA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGEGTSG*SDRNLL
Trigger: TAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGATTGACTCAGTTCATTaGACTCCATATCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRIDSVH*TPYPAK
Trigger: TTTTGCAGGATATGGAGTGCAATGAACTGAGTCAAT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCAGAGGGAAAGTCCCATaGACTTCCTATGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGRGKVP*TSYVKW
Trigger: CCATTTAACATAGGAAGTGCATGGGACTTTCCCTCT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTGCAAAATACATGGATaGCCAGGGCTTCTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFCKIHG*PGLLFK
Trigger: CTTAAACAGAAGCCCTGGCCATCCATGTATTTTGCA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGCCAAAGGGTATAAGTaGCTTGTGAAGAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFAKGYK*LVKKFH
Trigger: GTGAAACTTCTTCACAAGCCACTTATACCCTTTGGC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACAACCTTATCTTAGGTaGGTCTGTGCAAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKQPYLR*VCAKAS
Trigger: TGAGGCCTTTGCACAGACCCACCTAAGATAAGGTTG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACACAGAGAGGCTACATaGCTTGTCCTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKHREAT*LVLCHT
Trigger: TGTGTGACAAAGGACAAGCCATGTAGCCTCTCTGTG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAAGAGACCTATTTCTTTaGCCACCCCAACGTGGAATC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKRDLFL*PPQRGI
Trigger: GATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CAA 72 bp GGCATAACTCCCACAGATCACATACACCTTGCCATATaGACTCAGTTCATTGCACTCCATATCCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GITPTDHIHLAI*TQFIALHILQK
Trigger: TTTTTGCAGGATATGGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTATGCAGACATCACTGTaGTATCTTCACCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFMQTSL*YLHQQN
Trigger: GTTTTGTTGGTGAAGATATCACAGTGATGTCTGCAT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATGCAGACATCACTGTaGTATCTTCACCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQMQTSL*YLHQQN
Trigger: GTTTTGTTGGTGAAGATATCACAGTGATGTCTGCAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGTCCCAGTTTATGCATaGAGAAATAGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFVPVYA*RNRHRE
Trigger: CTCTCTGTGCCTATTTCTTCATGCATAAACTGGGAC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGCCCTACGATATAAATaGAGGAACAATGACAATCCA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGALRYK*RNNDNP
Trigger: TGGATTGTCATTGTTCCTTCATTTATATCGTAGGGC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALNKSSA*QLTLLL
Trigger: GAGCAATAATGTCAGCTGTCAAGCACTAGATTTATT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKNKSSA*QLTLLL
Trigger: GAGCAATAATGTCAGCTGTCAAGCACTAGATTTATT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTACACCTTGCCATATTaGCTCAGTTCATTGCACTCC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFYTLPY*LSSLHS
Trigger: GGAGTGCAATGAACTGAGTCAATATGGCAAGGTGTA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAATGCATGCGCCACCATaGCCAGCTAGTTCTTATATT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKMHAPP*PASSYI
Trigger: AATATAAGAACTAGCTGGGCATGGTGGCGCATGCAT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGAGATCACATACACCTTaGCATATTGACTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKRSHTP*HIDSVH
Trigger: ATGAACTGAGTCAATATGGCAAGGTGTATGTGATCT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCTTCAGATCCATTCTaGTTGAATGTAAGGCTATAC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSSDPF*LNVRLY
Trigger: GTATAGCCTTACATTCAAGCAGAATGGATCTGAAGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTCTTCAGATCCATTCTaGTTGAATGTAAGGCTATAC +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSSSDPF*LNVRLY
Trigger: GTATAGCCTTACATTCAAGCAGAATGGATCTGAAGA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AACATAGGCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: NIGIHRTSYKLRHACLSFELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...GAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGCCTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGTATCTTTTCCCAGTTaGACGAGGCCCATCATCAAA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFVSFPS*TRPIIK
Trigger: TTTGATGATGGGCCTCGTCCAACTGGGAAAAGATAC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATGCCCCTTTGGATCTaGCAACAATTTAACATAAGG +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQMPLWI*QQFNIR
Trigger: CCTTATGTTAAATTGTTGCCAGATCCAAAGGGGCAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTTTTATTTTACACAGTaGAATTTGTGCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKFYFTQ*NLCPSS
Trigger: GCTGGAAGGGCACAAATTCCACTGTGTAAAATAAAA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAAAGGGCCACCCCACTTaGATTCTGTTTGTTACTTGT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKKGHPT*ILFVTC
Trigger: ACAAGTAACAAACAGAATCCAAGTGGGGTGGCCCTT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGACTTCCTATGTTAAATaGCATAACTCCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKTSYVK*HNSHRS
Trigger: TGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCACTTCCTATGTTAAATaGCATAACTCCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: SWNLREHLDAQIETSYLSTSYVK*HNSHRS
Trigger: TGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAAGGCGTTCTTCTTTTTaGATTTTAGACCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKRRSSF*ILDQVG
Trigger: CCCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAATAAATCTAGTGCTTaGCAGCTGACATTATTGCTC +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPNKSSA*QLTLLL
Trigger: GAGCAATAATGTCAGCTGTCAAGCACTAGATTTATT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCAGGCAGCCGAATTTATaGAGTATCTTTTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFRQPNL*SIFSQL
Trigger: CAACTGGGAAAAGATACTGCATAAATTCGGCTGCCT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGCACTGGGCCTCCAATaGTTTCGATGGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFALGLQ*FRWKIK
Trigger: TTTTATTTTCCATCGAAAGCATTGGAGGCCCAGTGC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCCCTGTCAGTTTTTCTaGCCAGCACTGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFPCQFF*PALNFS
Trigger: TGAAAAATTCAGTGCTGGGCAGAAAAACTGACAGGG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGAGGGAACATCTGGATaGTCAGATAGAAACCTCTTA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKEGTSG*SDRNLL
Trigger: TAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATTGACTCAGTTCATTaGACTCCATATCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQIDSVH*TPYPAK
Trigger: TTTTGCAGGATATGGAGTGCAATGAACTGAGTCAAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGAGATCACATACACCTTaGCATATTGACTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQRSHTP*HIDSVH
Trigger: ATGAACTGAGTCAATATGGCAAGGTGTATGTGATCT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCTTCAGATCCATTCTaGTTGAATGTAAGGCTATAC +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSSDPF*LNVRLY
Trigger: GTATAGCCTTACATTCAAGCAGAATGGATCTGAAGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTCTAGTAACAGATATTaGTGCTTTCTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALSSNRY*CFLQIH
Trigger: ATGGATCTGAAGAAAGCAGCAATATCTGTTACTAGA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTCTTATAAAAAGGCGATaGACAGGCGTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPLIKRR*TGVLLF
Trigger: AAAAAGAAGAACGCCTGTCCATCGCCTTTTTATAAG...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTTTTATTTTACACAGTaGAATTTGTGCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGFYFTQ*NLCPSS
Trigger: GCTGGAAGGGCACAAATTCCACTGTGTAAAATAAAA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTTTTATTTTACACAGTaGAATTTGTGCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFFYFTQ*NLCPSS
Trigger: GCTGGAAGGGCACAAATTCCACTGTGTAAAATAAAA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATACAAAGGGAAATTCTaGCTCTTGGCCCAACTGTTT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKYKGKF*LLAQLF
Trigger: AAACAGTTGGGCCAAGAGCCAGAATTTCCCTTTGTA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCAGACCAGAGCTCATCTaGAATCAAGTGTACATGACT +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFRPELI*NQVYMT
Trigger: AGTCATGTACACTTGATTCCAGATGAGCTCTGGTCT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGACTTCCTATGTTAAATaGCATAACTCCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQTSYVK*HNSHRS
Trigger: TGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCACTTCCTATGTTAAATaGCATAACTCCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGTSYVK*HNSHRS
Trigger: TGATCTGTGGGAGTTATGCCATTTAACATAGGAAGT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR TCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGCCCTACGATATAAATaGAGGAACAATGACAATCCA +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFALRYK*RNNDNP
Trigger: TGGATTGTCATTGTTCCTTCATTTATATCGTAGGGC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCTAGTAACAGATATTaGTGCTTTCTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSSNRY*CFLQIH
Trigger: ATGGATCTGAAGAAAGCAGCAATATCTGTTACTAGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTCTAGTAACAGATATTaGTGCTTTCTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPSSNRY*CFLQIH
Trigger: ATGGATCTGAAGAAAGCAGCAATATCTGTTACTAGA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCTAGTAACAGATATTaGTGCTTTCTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSSNRY*CFLQIH
Trigger: ATGGATCTGAAGAAAGCAGCAATATCTGTTACTAGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTATTGGCTCACAGTTCTaGAGGCCAGGAAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIIGSQF*RPGNPR
Trigger: TCTTGGATTTCCTGGCCTCCAGAACTGTGAGCCAAT...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CCA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCTGAAAGCAATGTATTaGGTTTTCAGAAAGGATGAA +
Preference number: 4 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDLKAMY*VFRKDE
Trigger: TTCATCCTTTCTGAAAACCCAATACATTGCTTTCAG...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
3UTR CAA 72 bp CACACCATACAACCTTCACACCTGGCTACAGCAATGTaGACTTACATCACCATTGTTTATACTTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HTIQPSHLATAM*TYITIVYTCEN
Trigger: GTTTTCACAAGTATAAACAATGGTGATGTAAGTCAACATTGCTGTAGCCAGGTGTGAAGGTTGTATGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAATTGACTCAGTTCATTaGACTCCATATCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKIDSVH*TPYPAK
Trigger: TTTTGCAGGATATGGAGTGCAATGAACTGAGTCAAT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCAGATCACATACACCTTaGCATATTGACTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFRSHTP*HIDSVH
Trigger: ATGAACTGAGTCAATATGGCAAGGTGTATGTGATCT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAAGATCACATACACCTTaGCATATTGACTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKRSHTP*HIDSVH
Trigger: ATGAACTGAGTCAATATGGCAAGGTGTATGTGATCT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTCTTCAGATCCATTCTaGTTGAATGTAAGGCTATAC +
Preference number: 4 (lower is better)
Translates to: LNGITPTDHIHLAILTQFSSDPF*LNVRLY
Trigger: GTATAGCCTTACATTCAAGCAGAATGGATCTGAAGA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ATAGGAAAAGTCATCTGTGAATGTGATTGCCTCAGAATTGATCACATCGTGGAAATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: IGKVICECDCLRIDHIVEICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...TTCCACGATGTGATCAATTCTGAGGCAATCACATTCACAGATGACTTTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR GCA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATTGCACTCCATATCCTaGAAAAATAAATCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLHSIS*KNKSSA
Trigger: AGCACTAGATTTATTTTTGCAGGATATGGAGTGCAA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ATAAGCATGCAGTTCAAAACATTTTCACTGAGTGAGCACACCTGTCTCAGTTCATCTCAGTTCATTTTGTaGTGCTATAAGAGAATACCA +
Preference number: 4 (lower is better)
Translates to: ISMQFKTFSLSEHTCLSSSQFIL*CYKRIP
Trigger: TGGTATTCTCTTATAGCAGCACAAAATGAACTGAGA...TGAACTGAGACAGGTGTGCTCACTCAGTGAAAATGTTTTGAACTGCATGCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTGAATTGATCACATCGTaGAATGAAGGCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIELITS*NEGQPE
Trigger: TTCAGGTTGGCCTTCATTCCACGATGTGATCAATTC...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
3UTR CAA 72 bp CTTACATCACCATTGTTTATACTTGTGAAAACTTTATaGTGCACAGTGACATCCATTCCGCCAGACTTAATG +
Preference number: 4 (lower is better)
Translates to: LTSPLFILVKTL*CTVTSIPPDLM
Trigger: CATTAAGTCTGGCGGAATGGATGTCACTGTGCACAATAAAGTTTTCACAAGTATAAACAATGGTGATGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
3UTR CAA 72 bp TCAGATCCATTCTGCTTGAATGTAAGGCTATACTTTTaGCACACCAACAGAATTCTGCATCTTCTAATGGTA +
Preference number: 4 (lower is better)
Translates to: SDPFCLNVRLYF*HTNRILHLLMV
Trigger: TACCATTAGAAGATGCAGAATTCTGTTGGTGTGCAAAAAGTATAGCCTTACATTCAAGCAGAATGGATCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR GCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTATCTGTGAATGTGATTaGCTCAGAATTGATCACATC +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIICECD*LRIDHI
Trigger: GATGTGATCAATTCTGAGGCAATCACATTCACAGAT...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR GCA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTCAGTTCATTTTGTGCTaGTATAAGAGAATACCACAG +
Preference number: 4 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIQFILC*YKRIPQ
Trigger: CTGTGGTATTCTCTTATAGCAGCACAAAATGAACTG...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS CCA 90 bp AGAGGCAGAGCGAGAGGGGGCGCGGGAGGGTCCGCCGCGGGCTCATaGAAAGGCCAGGCAGCCGCCGCCGGTGTCCGAACCTCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RGRARGGAGGSAAGS*KGQAAAAGVRTSLP
Trigger: AGGGAGCGAGGTTCGGACACCGGCGGCGGCTGCCTGGCCTTTCCATGAGCCCGCGGCGGACCCTCCCGCGCCCCCTCTCGCTCTGCCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000538725.1
ENST00000541897.5
CDS CCA 90 bp CCGCACCCCCGTCCTCTCCGAGGCGCGCGGCGAAAAGCGCAGGCCTaGCGGGCCGGTTCCCACGCCTCGGGCCCGTTATCTGAGCGGCAA +
Preference number: 5 (lower is better)
Translates to: PHPRPLRGARRKAQA*RAGSHASGPLSERQ
Trigger: TTGCCGCTCAGATAACGGGCCCGAGGCGTGGGAACCGGCCCGCCAGGCCTGCGCTTTTCGCCGCGCGCCTCGGAGAGGACGGGGGTGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS CCA 90 bp ACTCTCCATTACTCTAGAGCTCCGCTTTGTCTGCCTGGGCCGGGCTaGCGACCCCACTGCCTCCCTCGGCGGTGCCACTGCTATCCGCAG +
Preference number: 5 (lower is better)
Translates to: TLHYSRAPLCLPGPG*RPHCLPRRCHCYPQ
Trigger: CTGCGGATAGCAGTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGAGCTCTAGAGTAATGGAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS GCA 90 bp ACTTTGTTTCCATCACTCTCCATTACTCTAGAGCTCCGCTTTGTCTaGCTGGGCCGGGCTGGCGACCCCACTGCCTCCCTCGGCGGTGCC +
Preference number: 5 (lower is better)
Translates to: TLFPSLSITLELRFV*LGRAGDPTASLGGA
Trigger: GGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGAGCTCTAGAGTAATGGAGAGTGATGGAAACAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS CCA 90 bp TCCTGTACCAGGCAGCCTGGGCGCCTACCAACCACGGTGGCCATCTaGCTTATGTCAAAGCCAGCGCACAGGAAGAGAGGCAGTGATGTC +
Preference number: 5 (lower is better)
Translates to: SCTRQPGRLPTTVAI*LMSKPAHRKRGSDV
Trigger: GACATCACTGCCTCTCTTCCTGTGCGCTGGCTTTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS CCA 90 bp TCATCAACTCCTGTACCAGGCAGCCTGGGCGCCTACCAACCACGGTaGCCATCTGGCTTATGTCAAAGCCAGCGCACAGGAAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSTPVPGSLGAYQPR*PSGLCQSQRTGREA
Trigger: TGCCTCTCTTCCTGTGCGCTGGCTTTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAGGAGTTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTCTACTGGCTGGCTCTTaGTCACCAAATGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCLLAGS*SPNAAG
Trigger: ACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAG...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVTKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGAGTATCTTTTCCCAGTaGGACGAGGCCCATCATCAA +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVSIFSQ*DEAHHQ
Trigger: TTGATGATGGGCCTCGTCCAACTGGGAAAAGATACT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCTKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGCTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGATACACCTTGCCATATaGACTCAGTTCATTGCACTC +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVIHLAI*TQFIAL
Trigger: GAGTGCAATGAACTGAGTCAATATGGCAAGGTGTAT...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGTGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: DPRGGYPTELEQPRGAVCVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...ACACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GGACCCCAGGGGAGGCTATCCTACAGAGCTGGAGCAGCCGAGAGGTGCTGTGTGGTAAGGCTATACTTTTaGCACACCAACAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: GPQGRLSYRAGAAERCCVVRLYF*HTNRIL
Trigger: CAGAATTCTGTTGGTGTGCAAAAAGTATAGCCTTAC...CACACAGCACCTCTCGGCTGCTCCAGCTCTGTAGGATAGCCTCCCCTGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTCTTGCTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSLAESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGCAAG...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR CAA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGTCACCTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: ASSDPPHLALSKYGITGLSPESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGGTGA...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS CCA 90 bp AAACGTCTTCCTATTCTGTTTCATCAACTCCTGTACCAGGCAGCCTaGGCGCCTACCAACCACGGTGGCCATCTGGCTTATGTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: KRLPILFHQLLYQAA*APTNHGGHLAYVKA
Trigger: GGCTTTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAGGAGTTGATGAAACAGAATAGGAAGACGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS-3UTR CAA 90 bp GTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAGCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: VIASELITSWNEGQPEPEHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...CTCCGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGGGTTCTGTTCGATTTaGGCCTGTGAAATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMGFCSI*ACEMPG
Trigger: GCCTGGCATTTCACAGGCCAAAATCGAACAGAACCC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS GCA 90 bp AGCCCACAGGCTCGAAGGGCTACTGGCTGGCTCTTTGTCACCAAATaGAGCAGGTTGAATGCAGACATCACTGTGATATCTTCACCAACA +
Preference number: 5 (lower is better)
Translates to: SPQARRATGWLFVTK*SRLNADITVISSPT
Trigger: TGTTGGTGAAGATATCACAGTGATGTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCCTGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000308259.10
ENST00000535239.5
ENST00000535664.5
ENST00000538045.5
ENST00000538725.1
ENST00000541897.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGCACAGGCGTGAGCCATaGCACTGGGCCTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQHRREP*HWASNA
Trigger: AGCATTGGAGGCCCAGTGCAATGGCTCACGCCTGTG...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: SWNLREHLDAQIETSYLSHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGAGTATCTTTTCCCAGTaGGACGAGGCCCATCATCAA +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMSIFSQ*DEAHHQ
Trigger: TTGATGATGGGCCTCGTCCAACTGGGAAAAGATACT...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTCAAGGCCATGTGTCTaGCAGGTCTCCATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFSRPCV*QVSMPC
Trigger: GCAGGGCATGGAGACCTGCAAGACACATGGCCTTGA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS CCA 90 bp GCAAAGCATGATGGTGTATCATTTCCTGCAGCAGAAACACCCAGTTaGCCCTGTGCCTTCACTATGTACAGTACAACAAGCAGCAACCTG +
Preference number: 5 (lower is better)
Translates to: AKHDGVSFPAAETPS*PCAFTMYSTTSSNL
Trigger: CAGGTTGCTGCTTGTTGTACTGTACATAGTGAAGGCACAGGGCCAACTGGGTGTTTCTGCTGCAGGAAATGATACACCATCATGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645872.1
CDS-3UTR CAA 90 bp GTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAGACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: VIASELITSWNEGQPEPETKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...CTCCGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CAA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGCTACTGGCTGGCTCTTaGTCACCAAATGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: NVIASELITSWNEGQPEPLLAGS*SPNAAG
Trigger: ACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAG...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCCTACTGGCTGGCTCTTaGTCACCAAATGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SWNLREHLDAQIETSYLSLLAGS*SPNAAG
Trigger: ACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAG...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGCTTTCTCTGTGAGATaGGGAAAGACTTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMAFSVR*GKTSRM
Trigger: CATCCTAGAAGTCTTTCCCAATCTCACAGAGAAAGC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACAGTGATCCTCCCCACTaGGCCCTCTCAAAGTATGGG +
Preference number: 5 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDSDPPH*ALSKYG
Trigger: CCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACT...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTACTGGCTGGCTCTTaGTCACCAAATGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLLAGS*SPNAAG
Trigger: ACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 5 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGCTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKTKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GCCTCAAGTGATCCTCCCCACTTGGCCCTCTCAAAGTATGGGATTACAGGCTTGGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: ASSDPPHLALSKYGITGLEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...CAAGCCTGTAATCCCATACTTTGAGAGGGCCAAGTGGGGAGGATCACTTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CAA 90 bp AGACTGAGACTGAGTCAGGAGGATCACATAAGCCCAGGAGTTGAGGGCTGCAGTGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: RLRLSQEDHISPGVEGCSEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...ACTGCAGCCCTCAACTCCTGGGCTTATGTGATCCTCCTGACTCAGTCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCACACTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFHTESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTCTCTATTTTCATGTTaGAAGACCATGAACCCTCTG +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMSLFSC*KTMNPL
Trigger: CAGAGGGTTCATGGTCTTCAAACATGAAAATAGAGA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGCTTTCTCTGTGAGATaGGGAAAGACTTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRAFSVR*GKTSRM
Trigger: CATCCTAGAAGTCTTTCCCAATCTCACAGAGAAAGC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGAGAGACCTATTTCTTaGGCCACCCCAACGTGGAAT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFERPIS*ATPTWN
Trigger: ATTCCACGTTGGGGTGGCCAAAGAAATAGGTCTCTC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGGTAAGGCTATACTTTTaGCACACCAACAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMVRLYF*HTNRIL
Trigger: CAGAATTCTGTTGGTGTGCAAAAAGTATAGCCTTAC...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AATGTGATTGCCTCAGAATTGATCACATCGTGGAATGAAGGCCAACCTGAACCGGAACCGGAGTCAAATTaGGTTTCTGACCTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: NVIASELITSWNEGQPEPEPESN*VSDLRE
Trigger: TTCCCTCAGGTCAGAAACCAAATTTGACTCCGGTTC...CGGTTCAGGTTGGCCTTCATTCCACGATGTGATCAATTCTGAGGCAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541897.5
CDS GCA 90 bp AAGGGCTACTGGCTGGCTCTTTGTCACCAAATGCAGCAGGTTGAATaGAGACATCACTGTGATATCTTCACCAACAAAACGAGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: KGYWLALCHQMQQVE*RHHCDIFTNKTRSK
Trigger: TTTGCTTCTCGTTTTGTTGGTGAAGATATCACAGTGATGTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000308259.10
ENST00000535239.5
ENST00000535664.5
ENST00000538045.5
ENST00000538725.1
ENST00000541897.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTACTGGCTGGCTCTTaGTCACCAAATGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLLAGS*SPNAAG
Trigger: ACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTAGTATCTTTTCCCAGTaGGACGAGGCCCATCATCAA +
Preference number: 5 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPSIFSQ*DEAHHQ
Trigger: TTGATGATGGGCCTCGTCCAACTGGGAAAAGATACT...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGAGTCCACCGGGATGTCAGGCTTCTTAGAGAGGTGCTTGTAGAGAGAGACATGTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RVHRDVRLLREVLVERDMCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...CATGTCTCTCTCTACAAGCACCTCTCTAAGAAGCCTGACATCCCGGTGGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCTCATTCCTGCTGCCTaGATGAAGTGTGTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFLIPAA*MKCVAP
Trigger: AGGGGCAACACACTTCATCAAGGCAGCAGGAATGAG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCCCCAAGACTTCATCCTaGATCTTCTCTGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGPKTSS*IFSALS
Trigger: AGAGAGAGCAGAGAAGATCAAGGATGAAGTCTTGGG...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTCCCATGCACTTCCTATGTTAAATGGCATAACTCCCACAGATCACATACACCTTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 5 (lower is better)
Translates to: VPCTSYVKWHNSHRSHTPSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...AGGTGTATGTGATCTGTGGGAGTTATGCCATTTAACATAGGAAGTGCATGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTCAAATGCCTGGGCTTaGGCCTTTGAGGCAATTAGA +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFSNAWA*AFEAIR
Trigger: TCTAATTGCCTCAAAGGCCAAAGCCCAGGCATTTGA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGCTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGATACACCTTGCCATATaGACTCAGTTCATTGCACTC +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRIHLAI*TQFIAL
Trigger: GAGTGCAATGAACTGAGTCAATATGGCAAGGTGTAT...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDRDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCCTGGGCTTTGGCCTTaGAGGCAATTAGAACCAGAT +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFPGLWP*RQLEPD
Trigger: ATCTGGTTCTAATTGCCTCAAAGGCCAAAGCCCAGG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGGGAAATTCTGGCTCTaGGCCCAACTGTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFGKFWL*AQLFPY
Trigger: GTATGGAAACAGTTGGGCCAAGAGCCAGAATTTCCC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGCTTTCTCTGTGAGATaGGGAAAGACTTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFAFSVR*GKTSRM
Trigger: CATCCTAGAAGTCTTTCCCAATCTCACAGAGAAAGC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GCATCCATCGGACTTCATATAAACTTCGTCATGCTTGTCTGTCCTTCTTGTGACCTTGTGACCAGTCGCTaGGCCTTAGTTGCTATATTT +
Preference number: 5 (lower is better)
Translates to: ASIGLHINFVMLVCPSCDLVTSR*ALVAIF
Trigger: AAATATAGCAACTAAGGCCAAGCGACTGGTCACAAG...GTCACAAGAAGGACAGACAAGCATGACGAAGTTTATATGAAGTCCGATGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCACCAAATGCAGCAGGTaGAATGCAGACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFTKCSR*NADITV
Trigger: CACAGTGATGTCTGCATTCAACCTGCTGCATTTGGT...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308259.10
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTGCAGCTGCTTTTAGGTGTGGAGAGAAGGACTTATAAAAAGGCGATGGACAGGGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: LQLLLGVERRTYKKAMDREPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...CCTGTCCATCGCCTTTTTATAAGTCCTTCTCTCCACACCTAAAAGCAGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAAGTATCTTTTCCCAGTaGGACGAGGCCCATCATCAA +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKSIFSQ*DEAHHQ
Trigger: TTGATGATGGGCCTCGTCCAACTGGGAAAAGATACT...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGGTCTCTACACTGCAGAGGAGATCTCTATTTTCATGTTTGAAGGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: CPALVSTLQRRSLFSCLKDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...CTTCAAACATGAAAATAGAGATCTCCTCTGCAGTGTAGAGACCAGAGCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGTAAAACTAGCCGTGTaGCTACAAAGGGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQVKLAV*LQREIL
Trigger: CAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTAC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTATACACCTTGCCATATaGACTCAGTTCATTGCACTC +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFIHLAI*TQFIAL
Trigger: GAGTGCAATGAACTGAGTCAATATGGCAAGGTGTAT...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCATACACCTTGCCATATaGACTCAGTTCATTGCACTC +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGIHLAI*TQFIAL
Trigger: GAGTGCAATGAACTGAGTCAATATGGCAAGGTGTAT...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGATACACCTTGCCATATaGACTCAGTTCATTGCACTC +
Preference number: 5 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQIHLAI*TQFIAL
Trigger: GAGTGCAATGAACTGAGTCAATATGGCAAGGTGTAT...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGGTAAGGCTATACTTTTaGCACACCAACAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALVRLYF*HTNRIL
Trigger: CAGAATTCTGTTGGTGTGCAAAAAGTATAGCCTTAC...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTCTTGCTGAGAGCAGCTaGTTTCCACCCTGTGCATCC +
Preference number: 5 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNILAESS*FPPCAS
Trigger: GGATGCACAGGGTGGAAACAAGCTGCTCTCAGCAAG...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CAA 90 bp TCTTGGAACCTGAGGGAACATCTGGATGCTCAGATAGAAACCTCTTATCTGAGCTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: SWNLREHLDAQIETSYLSCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...GCTCAGATAAGAGGTTTCTATCTGAGCATCCAGATGTTCCCTCAGGTTCCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp CTTGGATTCTGTTTGTTACTTGTACTGCCCTGTCAGTTTTTCTGCCCAGCACTGTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: LGFCLLLVLPCQFFCPALCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...CAGTGCTGGGCAGAAAAACTGACAGGGCAGTACAAGTAACAAACAGAATCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTCTCTATTTTCATGTTaGAAGACCATGAACCCTCTG +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFSLFSC*KTMNPL
Trigger: CAGAGGGTTCATGGTCTTCAAACATGAAAATAGAGA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGTCTCTATTTTCATGTTaGAAGACCATGAACCCTCTG +
Preference number: 5 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQSLFSC*KTMNPL
Trigger: CAGAGGGTTCATGGTCTTCAAACATGAAAATAGAGA...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGATTCTGTTTGTTACTaGTACTGCCCTGTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGDSVCY*YCPVSF
Trigger: AAAACTGACAGGGCAGTACAAGTAACAAACAGAATC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCCCACTTGGATTCTGTTaGTTACTTGTACTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFPLGFC*LLVLPC
Trigger: ACAGGGCAGTACAAGTAACAAACAGAATCCAAGTGG...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp ACAAACATGATGTACATTCGTCACACACCATACAACCTTCACACCTGGCTACAGGTAAGGCTATACTTTTaGCACACCAACAGAATTCTG +
Preference number: 5 (lower is better)
Translates to: TNMMYIRHTPYNLHTWLQVRLYF*HTNRIL
Trigger: CAGAATTCTGTTGGTGTGCAAAAAGTATAGCCTTAC...CTGTAGCCAGGTGTGAAGGTTGTATGGTGTGTGACGAATGTACATCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCTCAAAGTAAAACTAGCCGTGTTGCTACAAAGGGAAATTCTGGCGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: SRASQSKTSRVATKGNSGEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...GCCAGAATTTCCCTTTGTAGCAACACGGCTAGTTTTACTTTGAGAAGCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GTTTACTTCTCTGCCACAACACTCAGTATGCCCCTTTGGATCTGGCAACAATTTTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: VYFSATTLSMPLWIWQQFCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...AAATTGTTGCCAGATCCAAAGGGGCATACTGAGTGTTGTGGCAGAGAAGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACAGGCGTTCTTCTTTTaGAATTTTAGACCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKQAFFF*NFRPSG
Trigger: CCCACTTGGTCTAAAATTCAAAAAGAAGAACGCCTG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAACTGGCTACAGCAATGTaGACTTACATCACCATTGTT +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKLATAM*TYITIV
Trigger: AACAATGGTGATGTAAGTCAACATTGCTGTAGCCAG...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAATCTCTATTTTCATGTTaGAAGACCATGAACCCTCTG +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKSLFSC*KTMNPL
Trigger: CAGAGGGTTCATGGTCTTCAAACATGAAAATAGAGA...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS TCA 90 bp TTTTGTGCTGCTATAAGAGAATACCACAGACTGGTTAATTCAGAATaGATAGAAATTTATTGGCTCACAGTTCTGGAGGCCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: FCAAIREYHRLVNSE*IEIYWLTVLEARKS
Trigger: GGATTTCCTGGCCTCCAGAACTGTGAGCCAATAAATTTCTATTCATTCTGAATTAACCAGTCTGTGGTATTCTCTTATAGCAGCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CAA 90 bp GAGAGGCTACATGGCTTGTCCTTTGTCACACAGAAGATTATGTTGAGTATGAAAGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: ERLHGLSFVTQKIMLSMKEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...TTTCATACTCAACATAATCTTCTGTGTGACAAAGGACAAGCCATGTAGCCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS-3UTR CAA 90 bp TTAAATGGCATAACTCCCACAGATCACATACACCTTGCCATATTGACTCAGTTCTGCATTAAGTACACTTaGTTTCCATCACTCTCCATT +
Preference number: 5 (lower is better)
Translates to: LNGITPTDHIHLAILTQFCIKYT*FPSLSI
Trigger: AATGGAGAGTGATGGAAACAAAGTGTACTTAATGCA...GAACTGAGTCAATATGGCAAGGTGTATGTGATCTGTGGGAGTTATGCCATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000614640.4
ENST00000642404.1
ENST00000646299.1
CDS GCA 90 bp GCAGTTTCTTACTCAGACTGCCAGCCTCTTATGAACGTTATGATTTaGAGATGTGTAGTGTGCATTAAAGAACAAGAAGATATGAAATAT +
Preference number: 5 (lower is better)
Translates to: AVSYSDCQPLMNVMI*RCVVCIKEQEDMKY
Trigger: ATATTTCATATCTTCTTGTTCTTTAATGCACACTACACATCTGCAAATCATAACGTTCATAAGAGGCTGGCAGTCTGAGTAAGAAACTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645872.1
CDS-3UTR CAA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTATGAATAGAAATTTATaGGCTCACAGTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIMNRNL*AHSSGG
Trigger: GCCTCCAGAACTGTGAGCCAATAAATTTCTATTCAT...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CAA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTGAACCGGAGTCAAATTaGGTTTCTGACTTAAACAAT +
Preference number: 5 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNIEPESN*VSDLNN
Trigger: ATTGTTTAAGTCAGAAACCAAATTTGACTCCGGTTC...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS-3UTR CAA 90 bp ATGCACGCAGAGAAGTTAACAATTCATAAGCATAAGCATGCAGTTCAAAACATTCTGTCTCAGTTCATTTaGTGCTGCTATAAGAGAATA +
Preference number: 5 (lower is better)
Translates to: MHAEKLTIHKHKHAVQNILSQFI*CCYKRI
Trigger: TATTCTCTTATAGCAGCACAAAATGAACTGAGACAG...AATGTTTTGAACTGCATGCTTATGCTTATGAATTGTTAACTTCTCTGCGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446731.2
CDS CCA 72 bp GCGAGAGGGGGCGCGGGAGGGTCCGCCGCGGGCTCATaGAAAGGCCAGGCAGCCGCCGCCGGTGTCCGAACC +
Preference number: 6 (lower is better)
Translates to: ARGGAGGSAAGS*KGQAAAAGVRT
Trigger: GGTTCGGACACCGGCGGCGGCTGCCTGGCCTTTCCATGAGCCCGCGGCGGACCCTCCCGCGCCCCCTCTCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000538725.1
ENST00000540804.5
ENST00000541897.5
CDS TCA 72 bp CCCGGCTCCGGGCGACGGACGGGGCGGCGGGAGGCATaGCGGGAAATTCCTGGGCACGGGCAGCCGAGTCCA +
Preference number: 6 (lower is better)
Translates to: PGSGRRTGRREA*REIPGHGQPSP
Trigger: TGGACTCGGCTGCCCGTGCCCAGGAATTTCCCGTCATGCCTCCCGCCGCCCCGTCCGTCGCCCGGAGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355192.8
CDS CCA 72 bp CGTCCTCTCCGAGGCGCGCGGCGAAAAGCGCAGGCCTaGCGGGCCGGTTCCCACGCCTCGGGCCCGTTATCT +
Preference number: 6 (lower is better)
Translates to: RPLRGARRKAQA*RAGSHASGPLS
Trigger: AGATAACGGGCCCGAGGCGTGGGAACCGGCCCGCCAGGCCTGCGCTTTTCGCCGCGCGCCTCGGAGAGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS TCA 72 bp CTGGCGGGCCGGTTCCCACGCCTCGGGCCCGTTATCTaGGCGGCAACCCCGGCAGGGTCGACGCACAGAGCA +
Preference number: 6 (lower is better)
Translates to: LAGRFPRLGPVI*AATPAGSTHRA
Trigger: TGCTCTGTGCGTCGACCCTGCCGGGGTTGCCGCTCAGATAACGGGCCCGAGGCGTGGGAACCGGCCCGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS GCA 72 bp CCGCTTTGTCTGCCTGGGCCGGGCTGGCGACCCCACTaGCTCCCTCGGCGGTGCCACTGCTATCCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PLCLPGPGWRPH*LPRRCHCYPQV
Trigger: CACCTGCGGATAGCAGTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS CCA 72 bp TACTCTAGAGCTCCGCTTTGTCTGCCTGGGCCGGGCTaGCGACCCCACTGCCTCCCTCGGCGGTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: YSRAPLCLPGPG*RPHCLPRRCHC
Trigger: GCAGTGGCACCGCCGAGGGAGGCAGTGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGAGCTCTAGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS GCA 72 bp CCATCACTCTCCATTACTCTAGAGCTCCGCTTTGTCTaGCTGGGCCGGGCTGGCGACCCCACTGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PSLSITLELRFV*LGRAGDPTASL
Trigger: GAGGGAGGCAGTGGGGTCGCCAGCCCGGCCCAGGCAGACAAAGCGGAGCTCTAGAGTAATGGAGAGTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS TCA 72 bp GCTGGCAAACTCGGGGTTCTGTTCGATTTTGGCCTGTaGAATGCCAGGCGGGCCCGCTGGAGTCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: AGKLGVLFDFGL*NARRARWSLAQ
Trigger: CTGGGCCAGACTCCAGCGGGCCCGCCTGGCATTTCACAGGCCAAAATCGAACAGAACCCCGAGTTTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS CCA 72 bp AGGCAGCCTGGGCGCCTACCAACCACGGTGGCCATCTaGCTTATGTCAAAGCCAGCGCACAGGAAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: RQPGRLPTTVAI*LMSKPAHRKRG
Trigger: GCCTCTCTTCCTGTGCGCTGGCTTTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS CCA 72 bp CCTGTACCAGGCAGCCTGGGCGCCTACCAACCACGGTaGCCATCTGGCTTATGTCAAAGCCAGCGCACAGGA +
Preference number: 6 (lower is better)
Translates to: PVPGSLGAYQPR*PSGLCQSQRTG
Trigger: TCCTGTGCGCTGGCTTTGACATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS CAA 72 bp GGGCAAGAGCTGGCAAACTCGGGGTTCTGTTCGATTTaGGCCTGTGAAATGCCAGGCGGGCCCGCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GQELANSGFCSI*ACEMPGGPAGV
Trigger: GACTCCAGCGGGCCCGCCTGGCATTTCACAGGCCAAAATCGAACAGAACCCCGAGTTTGCCAGCTCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS CAA 90 bp AAAGAACAGGGGCAAGAGCTGGCAAACTCGGGGTTCTGTTCGATTTaGGCCTGTGAAATGCCAGGCGGGCCCGCTGGAGTCTGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: KEQGQELANSGFCSI*ACEMPGGPAGVWPS
Trigger: GCTGGGCCAGACTCCAGCGGGCCCGCCTGGCATTTCACAGGCCAAAATCGAACAGAACCCCGAGTTTGCCAGCTCTTGCCCCTGTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS CCA 72 bp GGCAAGAGCTGGCAAACTCGGGGTTCTGTTCGATTTTaGCCTGTGAAATGCCAGGCGGGCCCGCTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: GKSWQTRGSVRF*PVKCQAGPLES
Trigger: AGACTCCAGCGGGCCCGCCTGGCATTTCACAGGCCAAAATCGAACAGAACCCCGAGTTTGCCAGCTCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646299.1
CDS CCA 72 bp CCTATTCTGTTTCATCAACTCCTGTACCAGGCAGCCTaGGCGCCTACCAACCACGGTGGCCATCTGGCTTAT +
Preference number: 6 (lower is better)
Translates to: PILFHQLLYQAA*APTNHGGHLAY
Trigger: ATAAGCCAGATGGCCACCGTGGTTGGTAGGCGCCCAGGCTGCCTGGTACAGGAGTTGATGAAACAGAATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535664.5
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
CDS CCA 72 bp TCTGAGGGAAGCCCACAGGCTCGAAGGGCTACTGGCTaGCTCTTTGTCACCAAATGCAGCAGGTTGAATGCA +
Preference number: 6 (lower is better)
Translates to: SEGSPQARRATG*LFVTKCSRLNA
Trigger: TGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCCTGTGGGCTTCCCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538725.1
CDS TCA 72 bp CTCCTTCAAAGGCACTTTCGGTCCCTTTCTCCTGAGTaGCATGGTACTGCAGGGGTGTTAGCCGCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LLQRHFRSLSPE*HGTAGVLAASS
Trigger: TGAGGAAGCGGCTAACACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGAAAGTGCCTTTGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000446731.2
ENST00000535239.5
ENST00000535664.5
ENST00000538045.5
ENST00000540804.5
ENST00000541189.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS TCA 72 bp TTGGCTCACAGTTCTGGAGGCCAGGAAATCCAAGATTaGGGGGCAGCATCTGGTGAGGTCCTTCTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LAHSSGGQEIQD*GAASGEVLLAE
Trigger: CTCAGCAAGAAGGACCTCACCAGATGCTGCCCCTCAATCTTGGATTTCCTGGCCTCCAGAACTGTGAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446731.2
ENST00000541189.5
CDS TCA 72 bp TATTCTCCTTCAAAGGCACTTTCGGTCCCTTTCTCCTaGGTGACATGGTACTGCAGGGGTGTTAGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: YSPSKALSVPFS*VTWYCRGVSRF
Trigger: GAAGCGGCTAACACCCCTGCAGTACCATGTCACTCAGGAGAAAGGGACCGAAAGTGCCTTTGAAGGAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000446731.2
ENST00000535239.5
ENST00000535664.5
ENST00000538045.5
ENST00000540804.5
ENST00000541189.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS TCA 72 bp ATTCCATCTAGTTCTGGAGGCCAGGAAATCCAAGATTaGGGGGCAGCATCTGGTGAGGTCCTTCTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: IPSSSGGQEIQD*GAASGEVLLAE
Trigger: CTCAGCAAGAAGGACCTCACCAGATGCTGCCCCTCAATCTTGGATTTCCTGGCCTCCAGAACTAGATGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647481.1
CDS CCA 72 bp CAAGGCAGCCGAATTTATGCAGTATCTTTTCCCAGTTaGACGAGGCCCATCATCAAAAATGTGCCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: QGSRIYAVSFPS*TRPIIKNVPKV
Trigger: CACCTTGGGCACATTTTTGATGATGGGCCTCGTCCAACTGGGAAAAGATACTGCATAAATTCGGCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535239.5
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS CAA 72 bp ACAAGGCAGCCGAATTTATGCAGTATCTTTTCCCAGTaGGACGAGGCCCATCATCAAAAATGTGCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: TRQPNLCSIFSQ*DEAHHQKCAQG
Trigger: ACCTTGGGCACATTTTTGATGATGGGCCTCGTCCAACTGGGAAAAGATACTGCATAAATTCGGCTGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000308259.10
ENST00000355192.8
ENST00000535143.1
ENST00000535239.5
ENST00000535664.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000646299.1
CDS CAA 72 bp GGGTTTTCAGAAAGGATGAACTCACCTGAGAGCAGCTaGTTTCCACCCTGTGCATCCCATAGGAAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: GFSERMNSPESS*FPPCASHRKSH
Trigger: ATGACTTTTCCTATGGGATGCACAGGGTGGAAACAAGCTGCTCTCAGGTGAGTTCATCCTTTCTGAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS TCA 72 bp AGTCCTGAAAGCAATGTATTGGGTTTTCAGAAAGGATaGACTCACCTGAGAGCAGCTTGTTTCCACCCTGTG +
Preference number: 6 (lower is better)
Translates to: SPESNVLGFQKG*THLRAACFHPV
Trigger: CACAGGGTGGAAACAAGCTGCTCTCAGGTGAGTTCATCCTTTCTGAAAACCCAATACATTGCTTTCAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540804.5
CDS GCA 72 bp TGGCTGGCTCTTTGTCACCAAATGCAGCAGGTTGAATaGAGACATCACTGTGATATCTTCACCAACAAAACG +
Preference number: 6 (lower is better)
Translates to: WLALCHQMQQVE*RHHCDIFTNKT
Trigger: CGTTTTGTTGGTGAAGATATCACAGTGATGTCTGCATTCAACCTGCTGCATTTGGTGACAAAGAGCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000308259.10
ENST00000535239.5
ENST00000535664.5
ENST00000538045.5
ENST00000538725.1
ENST00000541897.5
ENST00000614640.4
ENST00000642404.1
ENST00000642411.1
ENST00000645872.1
ENST00000646299.1