Pregenerated sensors for MSRB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000148450Ensembl transcript IDs: ENST00000376510.8, ENST00000468633.1, ENST00000472663.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTaGGTTCTTGAGAGATCTGGCTGTTTAAAAGTATGTGGCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: EGGSLMAWCCPGDSE*VLERSGCLKVCGTS Trigger: GGAGGTGCCACATACTTTTAAACAGCCAGATCTCTCAAGAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR GCA 90 bp | GCCATGAGTAAAAGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATaGTGGCACCATGCTTTCTGTACACCCTGCAGAACTGTGAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: AMSKSSLRSPQNPSK*WHHAFCTPCRTVSQ Trigger: TTGACTCACAGTTCTGCAGGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCTTTTACTCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR GCA 90 bp | AAGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATaGTTTCTGTACACCCTGCAGAACTGTGAGTCAATTAAACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KLPQVSPESEQMLAP*FLYTLQNCESIKPL Trigger: AAGAGGTTTAATTGACTCACAGTTCTGCAGGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 90 bp | ATGAGTAAAAGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTaGCACCATGCTTTCTGTACACCCTGCAGAACTGTGAGTCAATTA | + |
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Preference number: 1 (lower is better) Translates to: MSKSSLRSPQNPSKC*HHAFCTPCRTVSQL Trigger: TAATTGACTCACAGTTCTGCAGGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCTTTTACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 90 bp | AGTCATTCAAGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: SHSSELWKLRVHVKG*QGNGTLEDGQCFLG Trigger: ACCAAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACTTGAATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| 3UTR TCA 90 bp | TCCTTCCTCTTCTCACTTGATCCCTTACTTATGTCTGTCAAGGACTaGAACGCAGTGGAAGGTGCAGGGAATTTTTGTAGGAATTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: SFLFSLDPLLMSVKD*NAVEGAGNFCRNCL Trigger: CAAACAATTCCTACAAAAATTCCCTGCACCTTCCACTGCGTTTCAGTCCTTGACAGACATAAGTAAGGGATCAAGTGAGAAGAGGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCVHVKG*QGNGTL Trigger: AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCAC...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: SELWKLRVHVKGWQGNGTVHVKG*QGNGTL Trigger: AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCAC...AGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| 3UTR CAA 90 bp | TTAAAAGTATGTGGCACCTCCCTACCACTCTCTCTTGCTCCTGCTTaGCCATGTGAGACGCCGGCTCCCCCTTCACCTTCTGCCATGAGT | + |
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Preference number: 2 (lower is better) Translates to: LKVCGTSLPLSLAPA*PCETPAPPSPSAMS Trigger: ACTCATGGCAGAAGGTGAAGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGAGGTGCCACATACTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR GCA 90 bp | CACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTTGCAGACAACCTCTGTaGGAGCTGATCCTAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: HVKGWQGNGTLEDGQCFLCRQPL*ELILTR Trigger: CCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCA...AAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| 3UTR-3UTR CCA 90 bp | CACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTAAAACCTCTGACCATTaGGCCCAGGTCCATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HVKGWQGNGTLEDGQCFLKTSDH*AQVHQE Trigger: TTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTT...AAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| 3UTR-3UTR CCA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTCATTCAAGTGAATTGTaGAAATTGAGGGTGCACGTG | + |
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Preference number: 2 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLHSSEL*KLRVHV Trigger: CACGTGCACCCTCAATTTCCACAATTCACTTGAATG...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| 3UTR CAA 90 bp | CAGCTGTCCCTCTGTCGTTTTGTGAAGTTCTACTCCAAGTGGGAGTaGGGTGATATGGTTTGGATGTTTTCCCTCTCCAAATCTTATGTT | + |
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Preference number: 2 (lower is better) Translates to: QLSLCRFVKFYSKWE*GDMVWMFSLSKSYV Trigger: AACATAAGATTTGGAGAGGGAAAACATCCAAACCATATCACCCAACTCCCACTTGGAGTAGAACTTCACAAAACGACAGAGGGACAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CAA 90 bp | AGCTCCTCCGTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTaGGATCCTGTATTTTCCTTCCTCTTCTCACTTGATCCCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: SSSVILLFSASIVDS*DPVFSFLFSLDPLL Trigger: AAGTAAGGGATCAAGTGAGAAGAGGAAGGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTACGGAGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACAGAAGCAATGACTCGCTaGAGACAGCAGCAAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTEAMTR*RQQQIQ Trigger: CTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTC...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATCATTCAAGTGAATTGTaGAAATTGAGGGTGCACGTG | + |
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Preference number: 2 (lower is better) Translates to: IKRSNDSLETAANSAQFYHSSEL*KLRVHV Trigger: CACGTGCACCCTCAATTTCCACAATTCACTTGAATG...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACAGGGAGTTGGGTGATATaGTTTGGATGTTTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTGSWVI*FGCFPS Trigger: AGAGGGAAAACATCCAAACCATATCACCCAACTCCC...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACATCTCAGGTGAAGCTGTaGAAGTGTTTGATGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTSQVKL*KCLMET Trigger: TGTTTCCATCAAACACTTCCACAGCTTCACCTGAGA...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR TCA 72 bp | GCCGGAGGTGGGCCCTGCCGGGAGGTAACTGGGTCATaGGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AGGGPCREVTGS*GWIPHGLVLSW Trigger: CCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGACCCAGTTACCTCCCGGCAGGGCCCACCTCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 72 bp | CCGGGAGGTAACTGGGTCATGAGGGTGGATCCCTCATaGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: PGGNWVMRVDPS*LGAVLVTVSEF Trigger: GAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGACCCAGTTACCTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTAGTGAATTGTGGAAATaGAGGGTGCACGTGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCSELWK*RVHVKG Trigger: CCCCTTCACGTGCACCCTCAATTTCCACAATTCACT...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR GCA 72 bp | AAAAGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATaGTGGCACCATGCTTTCTGTACACCCTGCAGAACT | + |
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Preference number: 3 (lower is better) Translates to: KSSLRSPQNPSK*WHHAFCTPCRT Trigger: AGTTCTGCAGGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CAA 90 bp | CACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTAGTGAATTGTGGAAATaGAGGGTGCACGTGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: HVKGWQGNGTLEDGQCFLSELWK*RVHVKG Trigger: CCCCTTCACGTGCACCCTCAATTTCCACAATTCACT...AAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| 3UTR GCA 72 bp | CAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATaGTTTCTGTACACCCTGCAGAACTGTGAGTCAATT | + |
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Preference number: 3 (lower is better) Translates to: QVSPESEQMLAP*FLYTLQNCESI Trigger: AATTGACTCACAGTTCTGCAGGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 72 bp | AGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SELWKLRVHVKG*QGNGTLEDGQC Trigger: ACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| 3UTR TCA 72 bp | TCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTaGGTTCTTGAGAGATCTGGCTGTTTAAAAGTATGT | + |
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Preference number: 3 (lower is better) Translates to: SLMAWCCPGDSE*VLERSGCLKVC Trigger: ACATACTTTTAAACAGCCAGATCTCTCAAGAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR TCA 72 bp | GTGTTTGATGGAAACAGCTGTCCCTCTGTCGTTTTGTaGAGTTCTACTCCAAGTGGGAGTTGGGTGATATGG | + |
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Preference number: 3 (lower is better) Translates to: VFDGNSCPSVVL*SSTPSGSWVIW Trigger: CCATATCACCCAACTCCCACTTGGAGTAGAACTTCACAAAACGACAGAGGGACAGCTGTTTCCATCAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CAA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCTACTCCAAGTGGGAGTaGGGTGATATGGTTTGGATG | + |
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Preference number: 3 (lower is better) Translates to: VILLFSASIVDSLDPVFSYSKWE*GDMVWM Trigger: CATCCAAACCATATCACCCAACTCCCACTTGGAGTA...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR TCA 72 bp | TTCTCACTTGATCCCTTACTTATGTCTGTCAAGGACTaGAACGCAGTGGAAGGTGCAGGGAATTTTTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: FSLDPLLMSVKD*NAVEGAGNFCR Trigger: CCTACAAAAATTCCCTGCACCTTCCACTGCGTTTCAGTCCTTGACAGACATAAGTAAGGGATCAAGTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 72 bp | ATCCCTTACTTATGTCTGTCAAGGACTGAAACGCAGTaGAAGGTGCAGGGAATTTTTGTAGGAATTGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: IPYLCLSRTETQ*KVQGIFVGIVW Trigger: CCAAACAATTCCTACAAAAATTCCCTGCACCTTCCACTGCGTTTCAGTCCTTGACAGACATAAGTAAGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR-3UTR CAA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCAGTCATTCAAGTGAATaGTGGAAATTGAGGGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VILLFSASIVDSLDPVFSSHSSE*WKLRVH Trigger: GTGCACCCTCAATTTCCACAATTCACTTGAATGACT...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| 3UTR CCA 72 bp | AAGTTCTACTCCAAGTGGGAGTTGGGTGATATGGTTTaGATGTTTTCCCTCTCCAAATCTTATGTTGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: KFYSKWELGDMV*MFSLSKSYVEV Trigger: TACTTCAACATAAGATTTGGAGAGGGAAAACATCCAAACCATATCACCCAACTCCCACTTGGAGTAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | TCCCTACCACTCTCTCTTGCTCCTGCTTTGCCATGTGAGACGCCGGCTCCCCCTTCCTGCTTTGCCATGTaGGACGCCGGCTCCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLPLSLAPALPCETPAPPSCFAM*DAGSPF Trigger: GAAGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGA...AGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCGCCGGAGGTGGGCCCTaGCGGGAGGTAACTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPAGGGP*REVTGS Trigger: TGACCCAGTTACCTCCCGGCAGGGCCCACCTCCGGC...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR GCA 90 bp | TCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGTTCTTGAGAGATCTGGCTCGTTGCAAGAGACCCTaGCTCCCCCAGTCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SWLGAVLVTVSEFLRDLARCKRP*LPQSRP Trigger: GGGCCGGGACTGGGGGAGGCAGGGTCTCTTGCAACG...AGCCAGATCTCTCAAGAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | GTCATGAGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGGAGCCAGACGTACCATaGGCCTCGGAAAACGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VMRVDPSWLGAVLVTVSEEPDVP*ASENEG Trigger: GCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTC...CTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR GCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTAGGCAGCTCACACGTTaGAAGAGACCCTGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCRQLTR*KRPCLP Trigger: GGGGAGGCAGGGTCTCTTGCAACGTGTGAGCTGCCT...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | TCCCTACCACTCTCTCTTGCTCCTGCTTTGCCATGTGAGACGCCGGCTCCCCCTAAAACCTCTGACCATTaGGCCCAGGTCCATCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLPLSLAPALPCETPAPPKTSDH*AQVHQE Trigger: TTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTT...AGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPVHVKG*QGNGTL Trigger: AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCAC...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | TCAAGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGGAGCCAGACGTACCATaGGCCTCGGAAAACGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSELWKLRVHVKGWQGNGEPDVP*ASENEG Trigger: GCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTC...CCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR GCA 90 bp | GTCATGAGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGTGCAGACAACCTCTGTaGGAGCTGATCCTAACGAGG | + |
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Preference number: 4 (lower is better) Translates to: VMRVDPSWLGAVLVTVSECRQPL*ELILTR Trigger: CCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCA...CTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | GTCATGAGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGAGGGAACGGGACTCTTaGAGATGGTCAGTGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VMRVDPSWLGAVLVTVSERERDS*RWSVFP Trigger: AGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCT...CTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCCCTGGTGACAGTGAGTaGGTTCTTGAGAGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPPGDSE*VLERSG Trigger: GCCAGATCTCTCAAGAACTCACTCACTGTCACCAGG...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | TGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATTTCCCTTTTCTCTTGTaGCGTAGAACTGCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: WKLRVHVKGWQGNGTLEDFPFLL*RRTAPG Trigger: CCCCGGAGCAGTTCTACGTCACAAGAGAAAAGGGAA...ATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTTTGATGCAAAACCTCTaGCCATTGGGCCCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLLMQNL*PLGPGP Trigger: TGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAA...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | TCCCTACCACTCTCTCTTGCTCCTGCTTTGCCATGTGAGACGCCGGCTCCCCCTAGTGTTTCCTTGGTTTaGACTTCAAAGCCACACTGT | + |
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Preference number: 4 (lower is better) Translates to: SLPLSLAPALPCETPAPPSVSLV*TSKPHC Trigger: ACAGTGTGGCTTTGAAGTTCAAACCAAGGAAACACT...AGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCATGTCTGTCAAGGACTaGAACGCAGTGGAAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPMSVKD*NAVEGA Trigger: TGCACCTTCCACTGCGTTTCAGTCCTTGACAGACAT...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR GCA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAGCTTCACACTGCTTaGAGACAACCTCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLELHTA*RQPLCE Trigger: CTCGCACAGAGGTTGTCTGCAAGCAGTGTGAAGCTC...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | AGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTCAGGATCCCTGTGTaGCTTTCATCAGAGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SELWKLRVHVKGWQGNGTLRIPV*LSSEPD Trigger: GTCTGGCTCTGATGAAAGCCACACAGGGATCCTGAG...AGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | TCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGACCTAGATGAGCTTCACCTCAGGATCCCTGTGTaGCTTTCATCAGAGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDHWAQVHQETRDLDELHLRIPV*LSSEPD Trigger: GTCTGGCTCTGATGAAAGCCACACAGGGATCCTGAG...GTGAAGCTCATCTAGGTCACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTCTGTCGTTTTGTGAAGTTCTACTCCAAGTGGGAGTTGGGTGATATGCTGCCGGGAGGTAACTaGGTCATGAGGGTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCRFVKFYSKWELGDMLPGGN*VMRVDP Trigger: GGGATCCACCCTCATGACCCAGTTACCTCCCGGCAG...CATATCACCCAACTCCCACTTGGAGTAGAACTTCACAAAACGACAGAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | TTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAATCGCAGCACACGCAATaGTACATTCCTGCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWKLRVHVKGWQGNGTLESQHTQ*YIPASL Trigger: CAAGGAAGCAGGAATGTATCATTGCGTGTGCTGCGA...TTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTCCCTCTGTCGTTTTGTaGAGTTCTACTCCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLPSVVL*SSTPSG Trigger: CCCACTTGGAGTAGAACTTCACAAAACGACAGAGGG...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR GCA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLTKATQ*QSSTFS Trigger: AGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGT...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR GCA 90 bp | TCAAGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGCACTATCGAAGCCATTaGCTCTCGAAGTGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSELWKLRVHVKGWQGNGHYRSH*LSKWKD Trigger: GTCCTTCCACTTCGAGAGGCAATGGCTTCGATAGTG...CCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | TGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGACCTAGATTTTGCCACTCACTCTTaGCAAGAGGCAGCTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: CKTSDHWAQVHQETRDLDFATHS*QEAAHT Trigger: CGTGTGAGCTGCCTCTTGCCAAGAGTGAGTGGCAAA...ATCTAGGTCACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | TCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGTTCTTGAGAGATCTGGCTCTCAGAACTGAAGAGTaGACTGTCGCAGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWLGAVLVTVSEFLRDLALRTEE*TVAAHA Trigger: TGCGTGTGCTGCGACAGTCCACTCTTCAGTTCTGAG...AGCCAGATCTCTCAAGAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTGGTTTGAACTTCGTGCACGTGAAGGGGTaGCAAGGGAACGGGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQGNGTLEDGQCFLGLNFVHVKG*QGNGTL Trigger: AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCAC...GAAGTTCAAACCAAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTTCAAAGCCACACTGTTaGTGCAAAACCTCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCSKPHC*CKTSDH Trigger: ATGGTCAGAGGTTTTGCATCAACAGTGTGGCTTTGA...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR TCA 90 bp | CACACTGTTGATGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACAGGGAACGGGACTCTTaGAGATGGTCAGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTVDAKPLTIGPRSIRKHRERDS*RWSVFP Trigger: AGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCT...GTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAACAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCTCTGTCGTTTTGTGAAGTTCTACTCCAAGTGGGAGTTGGGTGATATGAGTCCATCAGCCTCCTaGTGTTCCCAGAGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCRFVKFYSKWELGDMSPSAS*CSQSHA Trigger: GGCATGACTCTGGGAACATCAGGAGGCTGATGGACT...CATATCACCCAACTCCCACTTGGAGTAGAACTTCACAAAACGACAGAGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGAGGGTGGATCCCTCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGCTTCCTCTTCTCACTTaGTCCCTTACTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VMRVDPSWLGAVLVTVSELPLLT*SLTYVC Trigger: ACAGACATAAGTAAGGGATCAAGTGAGAAGAGGAAG...CTCACTCACTGTCACCAGGACAGCACCAAGCCATGAGGGATCCACCCTCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTGATGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVDAKPLTIGPRSIRKHVTKATQ*QSSTFS Trigger: AGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGT...CACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCAATCCGAGCAAATGCTaGCACCATGCTTTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPNPSKC*HHAFCT Trigger: TGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATT...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTCTGTCGTTTTGTGAAGTTCTACTCCAAGTGGGAGTTGGGTGATATGGGATCCCTCATGGCTTaGTGCTGTCCTGGTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCRFVKFYSKWELGDMGSLMA*CCPGDS Trigger: ACTGTCACCAGGACAGCACCAAGCCATGAGGGATCC...CATATCACCCAACTCCCACTTGGAGTAGAACTTCACAAAACGACAGAGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCAGGACTGAAACGCAGTaGAAGGTGCAGGGAATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPRTETQ*KVQGIF Trigger: AAAAATTCCCTGCACCTTCCACTGCGTTTCAGTCCT...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | CACTGCTTGCAGACAACCTCTGTGCGAGCTGATCCTAACGAGGTATCCAGACGTTCAAAGCCACACTGTTaGTGCAAAACCTCTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HCLQTTSVRADPNEVSRRSKPHC*CKTSDH Trigger: ATGGTCAGAGGTTTTGCATCAACAGTGTGGCTTTGA...ACGTCTGGATACCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCAAGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR GCA 90 bp | TGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTGGTTTGAACTTCGAGCTTCACACTGCTTaGAGACAACCTCTGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WQGNGTLEDGQCFLGLNFELHTA*RQPLCE Trigger: CTCGCACAGAGGTTGTCTGCAAGCAGTGTGAAGCTC...GAAGTTCAAACCAAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTCATTCAAGTGAATTGTaGAAATTGAGGGTGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCHSSEL*KLRVHV Trigger: CACGTGCACCCTCAATTTCCACAATTCACTTGAATG...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCTCTCAGGTGAAGCTGTaGAAGTGTTTGATGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPSQVKL*KCLMET Trigger: TGTTTCCATCAAACACTTCCACAGCTTCACCTGAGA...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | ACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGACCTAGATGAGCTTCATTGCCTCTCGAAGTaGAAGGACTTCTTGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSDHWAQVHQETRDLDELHCLSK*KDFLIL Trigger: AAGGATCAAGAAGTCCTTCCACTTCGAGAGGCAATG...AAGCTCATCTAGGTCACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | CACACTGCTTGCAGACAACCTCTGTGCGAGCTGATCCTAACGAGGTATCCAGACAGTGGAAGGACTTCTTaGTCCTTTGATGCTAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HTACRQPLCELILTRYPDSGRTS*SFDAKD Trigger: GTCTTTAGCATCAAAGGATCAAGAAGTCCTTCCACT...GTCTGGATACCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCAAGCAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR GCA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATCTCTTGCTCCTGCTTTaGCATGTGAGACGCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKRSNDSLETAANSAQFYLLLLL*HVRRRL Trigger: GAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAG...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | TGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTTCCTTGGTTTGAACTTCAAAACCTCTGACCATTaGGCCCAGGTCCATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WQGNGTLEDGQCFLGLNFKTSDH*AQVHQE Trigger: TTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTT...GAAGTTCAAACCAAGGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | GCTTCACACTGCTTGCAGACAACCTCTGTGCGAGCTGATCCTAACGAGGTATCCCATTCAAGTGAATTGTaGAAATTGAGGGTGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASHCLQTTSVRADPNEVSHSSEL*KLRVHV Trigger: CACGTGCACCCTCAATTTCCACAATTCACTTGAATG...GGATACCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCAAGCAGTGTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATAGGGTGGATCCCTCATaGCTTGGTGCTGTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKRSNDSLETAANSAQFYRVDPS*LGAVLV Trigger: CACCAGGACAGCACCAAGCCATGAGGGATCCACCCT...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | TCATGGCTTGGTGCTGTCCTGGTGACAGTGAGTGAGTTCTTGAGAGATCTGGCTGGGAGTTGGGTGATATaGTTTGGATGTTTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWLGAVLVTVSEFLRDLAGSWVI*FGCFPS Trigger: AGAGGGAAAACATCCAAACCATATCACCCAACTCCC...AGCCAGATCTCTCAAGAACTCACTCACTGTCACCAGGACAGCACCAAGCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | TTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAAAGTTCTACTCCAAGTaGGAGTTGGGTGATATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LWKLRVHVKGWQGNGTLEKFYSK*ELGDMV Trigger: AACCATATCACCCAACTCCCACTTGGAGTAGAACTT...TTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTACACCCGCATTGTTGATTCCTTaGATCCTGTATTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPQNPSKCWHHAFCTPALLIP*ILYFPS Trigger: GGAAGGAAAATACAGGATCCAAGGAATCAACAATGC...GGGTGTACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAAGCCACACTGTTGATGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGTGTTTCCTTGGTTTaGACTTCAAAGCCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSHTVDAKPLTIGPRSISVSLV*TSKPHC Trigger: ACAGTGTGGCTTTGAAGTTCAAACCAAGGAAACACT...GATGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAACAGTGTGGCTTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR TCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTCTCCAAATCTTATGTTaGAGTATAATTCCTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCLQILC*SIIPSA Trigger: GGCACTAGGAATTATACTTCAACATAAGATTTGGAG...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTTTTGTAGGAATTGTTTaGCTTAATAGTCCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCFVGIV*LNSPSA Trigger: GGCTGATGGACTATTAAGCCAAACAATTCCTACAAA...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCTTCCCTTTTCTCTTGTaGCGTAGAACTGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VILLFSASIVDSLDPVFSFPFLL*RRTAPG Trigger: CCCCGGAGCAGTTCTACGTCACAAGAGAAAAGGGAA...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CCA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCTTTGCCACTCACTCTTaGCAAGAGGCAGCTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: VILLFSASIVDSLDPVFSFATHS*QEAAHT Trigger: CGTGTGAGCTGCCTCTTGCCAAGAGTGAGTGGCAAA...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR TCA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACATTGATGCAAAACCTCTaGCCATTGGGCCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTLMQNL*PLGPGP Trigger: TGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAA...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATATTGCAGTTTATTTGTaGGTAGAATGGTTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WKLRVHVKGWQGNGTLEDIAVYL*VEWLEV Trigger: TACTTCCAACCATTCTACCCACAAATAAACTGCAAT...ATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATGAAGCAATGACTCGCTaGAGACAGCAGCAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKRSNDSLETAANSAQFYEAMTR*RQQQIQ Trigger: CTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTC...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR TCA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCAGTCATGCATCTGATTaGTCACCATATATGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VILLFSASIVDSLDPVFSSHASD*SPYMLP Trigger: TGGGAGCATATATGGTGATCAATCAGATGCATGACT...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR CCA 90 bp | GTAATCCTGCTCTTCAGTGCTAGCATTGTTGATTCCTTGGATCCTGTATTTTCCTTGGGTGATATGGTTTaGATGTTTTCCCTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VILLFSASIVDSLDPVFSLGDMV*MFSLSK Trigger: TTTGGAGAGGGAAAACATCCAAACCATATCACCCAA...GGAAAATACAGGATCCAAGGAATCAACAATGCTAGCACTGAAGAGCAGGATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATTATTTGTGGGTAGAATaGTTGGAAGTAGCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKRSNDSLETAANSAQFYYLWVE*LEVACS Trigger: TGAGCATGCTACTTCCAACCATTCTACCCACAAATA...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS-3UTR GCA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACACTAACCAAGTCCTATTaGAGTTTATTTGTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTLTKSY*SLFVGR Trigger: TCTACCCACAAATAAACTGCAATAGGACTTGGTTAG...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
||
| CDS GCA 90 bp | GCTCACACGTTGCAAGAGACCCTGCCTCCCCCAGTCCCGGCCCGGTaGCGGGCCCGCCGCCGCCCGCTTGGCCCCGCACCGCCCGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AHTLQETLPPPVPAR*RARRRPLGPAPPAE Trigger: CTCGGCGGGCGGTGCGGGGCCAAGCGGGCGGCGGCGGGCCCGGCACCGGGCCGGGACTGGGGGAGGCAGGGTCTCTTGCAACGTGTGAGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | TCCCTACCACTCTCTCTTGCTCCTGCTTTGCCATGTGAGACGCCGGCTCCCCCTAGTGAATTGTGGAAATaGAGGGTGCACGTGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SLPLSLAPALPCETPAPPSELWK*RVHVKG Trigger: CCCCTTCACGTGCACCCTCAATTTCCACAATTCACT...AGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS TCA 90 bp | CGTCTCAGGATCCCTGTGTGGCTTTCATCAGAGCCAGACGTACCATaGGCCTCGGAAAACGAAGGCCACCCAGTGCCAGAGCAGTACTTT | + |
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Preference number: 5 (lower is better) Translates to: RLRIPVWLSSEPDVP*ASENEGHPVPEQYF Trigger: AAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTCTGATGAAAGCCACACAGGGATCCTGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376510.8 ENST00000468633.1 ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTCCCTACCACTCTCTCTaGCTCCTGCTTTGCCATGTG | + |
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Preference number: 5 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLPYHSL*LLLCHV Trigger: CACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGG...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATGGTCAGTGTTCACTATCGAAGCCATaGCCTCTCGAAGTGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RVHVKGWQGNGTLEDGQCSLSKP*PLEVEG Trigger: TCCTTCCACTTCGAGAGGCAATGGCTTCGATAGTGA...ACACTGACCATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | TCAAGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGAAGGGAACGGGACTCTaGAAGATGGTCAGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSELWKLRVHVKGWQGNGKGTGL*KMVSVS Trigger: GGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTT...CCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376510.8 ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | TCCCTACCACTCTCTCTTGCTCCTGCTTTGCCATGTGAGACGCCGGCTCCCCCTAGCATTGTTGATTCCTaGGATCCTGTATTTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLPLSLAPALPCETPAPPSIVDS*DPVFSF Trigger: GAAGGAAAATACAGGATCCAAGGAATCAACAATGCT...AGGGGGAGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGAGAGTGGTAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS GCA 90 bp | CAGAGCCAGACGTACCATGAGCCTCGGAAAACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCTCAGAACTGTGGAAGACATAAACGA | + |
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Preference number: 5 (lower is better) Translates to: QSQTYHEPRKTKATQ*QSSTFSQNCGRHKR Trigger: TCGTTTATGTCTTCCACAGTTCTGAGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468633.1 |
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| CDS GCA 90 bp | CAGAGCCAGACGTACCATGAGCCTCGGAAAACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCTCAGAACTTCACTATCGAAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: QSQTYHEPRKTKATQ*QSSTFSQNFTIEAI Trigger: AATGGCTTCGATAGTGAAGTTCTGAGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | ACTGTTGATGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGAGTGAATTGTGGAAATaGAGGGTGCACGTGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVDAKPLTIGPRSIRKHVSELWK*RVHVKG Trigger: CCCCTTCACGTGCACCCTCAATTTCCACAATTCACT...CACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTTGCATCAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | AGTGAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTTACTCCAAGTGGGAGTaGGGTGATATGGTTTGGATG | + |
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Preference number: 5 (lower is better) Translates to: SELWKLRVHVKGWQGNGTYSKWE*GDMVWM Trigger: CATCCAAACCATATCACCCAACTCCCACTTGGAGTA...AGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACAGAGGCAGCTCACACGTaGCAAGAGACCCTGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTEAAHT*QETLPP Trigger: GGGAGGCAGGGTCTCTTGCAACGTGTGAGCTGCCTC...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCCTCAGGTCTCCCCAGAATCCGAGCAAATGCTGGCACCATGCTTTCTGTAGTCATTCAAGTGAATaGTGGAAATTGAGGGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: SSLRSPQNPSKCWHHAFCSHSSE*WKLRVH Trigger: GTGCACCCTCAATTTCCACAATTCACTTGAATGACT...ACAGAAAGCATGGTGCCAGCATTTGCTCGGATTCTGGGGAGACCTGAGGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTTCTTCAGTGCTAGCATaGTTGATTCCTTGGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLSSVLA*LIPWIL Trigger: CAGGATCCAAGGAATCAACAATGCTAGCACTGAAGA...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | TGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGAAGATTTGTGGGTAGAATGGTaGGAAGTAGCATGCTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: WKLRVHVKGWQGNGTLEDLWVEW*EVACSR Trigger: TCTTGAGCATGCTACTTCCAACCATTCTACCCACAA...ATCTTCAAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | TGCAAAACCTCTGACCATTGGGCCCAGGTCCATCAGGAAACACGTGACCTAGATAGTCATTCAAGTGAATaGTGGAAATTGAGGGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: CKTSDHWAQVHQETRDLDSHSSE*WKLRVH Trigger: GTGCACCCTCAATTTCCACAATTCACTTGAATGACT...ATCTAGGTCACGTGTTTCCTGATGGACCTGGGCCCAATGGTCAGAGGTTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACATCTCTTGCTCCTGCTTaGCCATGTGAGACGCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTSLAPA*PCETPA Trigger: AGCCGGCGTCTCACATGGCAAAGCAGGAGCAAGAGA...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | GAATTGTGGAAATTGAGGGTGCACGTGAAGGGGTGGCAAGGGAACGGGACTCTTGGACTTCTTGATCCTTaGATGCTAAAGACTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ELWKLRVHVKGWQGNGTLGLLDP*MLKTSF Trigger: GAAAGAAGTCTTTAGCATCAAAGGATCAAGAAGTCC...AAGAGTCCCGTTCCCTTGCCACCCCTTCACGTGCACCCTCAATTTCCACAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATAAGGGAACGGGACTCTaGAAGATGGTCAGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: IKRSNDSLETAANSAQFYKGTGL*KMVSVS Trigger: GGAAACACTGACCATCTTCAAGAGTCCCGTTCCCTT...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS TCA 90 bp | AACTTCACTATCGAAGCCATTGCCTCTCGAAGTGGAAGGACTTCTTaGTCCTTTGATGCTAAAGACTTCTTTCTGGATATCCAACAAGGA | + |
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Preference number: 5 (lower is better) Translates to: NFTIEAIASRSGRTS*SFDAKDFFLDIQQG Trigger: TCCTTGTTGGATATCCAGAAAGAAGTCTTTAGCATCAAAGGATCAAGAAGTCCTTCCACTTCGAGAGGCAATGGCTTCGATAGTGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS-3UTR CAA 90 bp | ATTAAGAGAAGCAATGACTCGCTGGAGACAGCAGCAAATTCAGCCCAGTTTTATTCAGTGCTAGCATTGTaGATTCCTTGGATCCTGTAT | + |
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Preference number: 5 (lower is better) Translates to: IKRSNDSLETAANSAQFYSVLAL*IPWILY Trigger: ATACAGGATCCAAGGAATCAACAATGCTAGCACTGA...ATAAAACTGGGCTGAATTTGCTGCTGTCTCCAGCGAGTCATTGCTTCTCTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS-3UTR CAA 90 bp | TCCTATTGCAGTTTATTTGTGGGTAGAATGGTTGGAAGTAGCATGCTCAAGACACCTATTGCAGTTTATTaGTGGGTAGAATGGTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SYCSLFVGRMVGSSMLKTPIAVY*WVEWLE Trigger: TTCCAACCATTCTACCCACAAATAAACTGCAATAGG...TGTCTTGAGCATGCTACTTCCAACCATTCTACCCACAAATAAACTGCAATAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376510.8 |
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| CDS TCA 72 bp | ATCCCTGTGTGGCTTTCATCAGAGCCAGACGTACCATaGGCCTCGGAAAACGAAGGCCACCCAGTGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: IPVWLSSEPDVP*ASENEGHPVPE Trigger: CTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGTCTGGCTCTGATGAAAGCCACACAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376510.8 ENST00000468633.1 ENST00000472663.1 |
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| CDS GCA 72 bp | CTAGATGAGCTTCACACTGCTTGCAGACAACCTCTGTaGGAGCTGATCCTAACGAGGTATCCAGACGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LDELHTACRQPL*ELILTRYPDVS Trigger: TGAGACGTCTGGATACCTCGTTAGGATCAGCTCGCACAGAGGTTGTCTGCAAGCAGTGTGAAGCTCATCTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000376510.8 ENST00000468633.1 ENST00000472663.1 |
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| CDS GCA 72 bp | ACGTACCATGAGCCTCGGAAAACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCTCAGAACTGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TYHEPRKTKATQ*QSSTFSQNCGR Trigger: TCTTCCACAGTTCTGAGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468633.1 |
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| CDS GCA 72 bp | ACGTACCATGAGCCTCGGAAAACGAAGGCCACCCAGTaGCAGAGCAGTACTTTTTCTCAGAACTTCACTATC | + |
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Preference number: 6 (lower is better) Translates to: TYHEPRKTKATQ*QSSTFSQNFTI Trigger: GATAGTGAAGTTCTGAGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS CAA 90 bp | CTATCGAAGCCATTGCCTCTCGAAGTGGAAGGACTTCTTGATCCTTaGATGCTAAAGACTTCTTTCTGGATATCCAACAAGGATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSKPLPLEVEGLLDP*MLKTSFWISNKDLK Trigger: CTTCAGATCCTTGTTGGATATCCAGAAAGAAGTCTTTAGCATCAAAGGATCAAGAAGTCCTTCCACTTCGAGAGGCAATGGCTTCGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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| CDS CAA 72 bp | CCATTGCCTCTCGAAGTGGAAGGACTTCTTGATCCTTaGATGCTAAAGACTTCTTTCTGGATATCCAACAAG | + |
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Preference number: 6 (lower is better) Translates to: PLPLEVEGLLDP*MLKTSFWISNK Trigger: CTTGTTGGATATCCAGAAAGAAGTCTTTAGCATCAAAGGATCAAGAAGTCCTTCCACTTCGAGAGGCAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472663.1 |
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