RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MSRA (Homo sapiens)

Ensembl gene IDs: ENSG00000175806

Ensembl transcript IDs: ENST00000317173.9, ENST00000382490.9, ENST00000441698.6, ENST00000517594.1, ENST00000518255.5, ENST00000521209.6, ENST00000521686.1, ENST00000522907.5, ENST00000523637.2, ENST00000528246.5, ENST00000642546.1, ENST00000642775.1, ENST00000643047.1, ENST00000643317.1, ENST00000643332.1, ENST00000645254.1, ENST00000645318.2, ENST00000647411.1, ENST00000647412.1, ENST00000647542.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTaGTCGAAACCTCTGCTGAACAGCCTGCTTGAAAATCCACCGGAG +
Preference number: 1 (lower is better)
Translates to: SHEDSHTPLFPHLGS*SKPLLNSLLENPPE
Trigger: CTCCGGTGGATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR TCA 90 bp ACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACCTCTGCTaGACAGCCTGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGG +
Preference number: 1 (lower is better)
Translates to: TLRSSHTWAPARNLC*TACLKIHRSILLIR
Trigger: CCTTATCAACAGAATACTCCGGTGGATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR GCA 90 bp TCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTTGTaGAGCTCCTTTCATGCTTCTGGATTCAGTGCCACTTGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: SDFPCCLCKSYEEKL*SSFHASGFSATWLC
Trigger: GCACAGCCAAGTGGCACTGAATCCAGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR TCA 90 bp CCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTGAACAGCCTGCTTaGAAATCCACCGGAGTATTC +
Preference number: 2 (lower is better)
Translates to: PEGHTRTPTLRSSHTWAPAEQPA*KSTGVF
Trigger: GAATACTCCGGTGGATTTTCAAGCAGGCTGTTCAGC...AGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp GAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTTGCTTCTGGATTCAGTaGCACTTGGCTGTGCAGATT +
Preference number: 2 (lower is better)
Translates to: EGHTRTPTLRSSHTWAPACFWIQ*HLAVQI
Trigger: AATCTGCACAGCCAAGTGGCACTGAATCCAGAAGCA...AGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp CAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTGCTTCTGGATTCAGTaGCACTTGGCTGTGCAGATT +
Preference number: 2 (lower is better)
Translates to: QSVPSPPPEGHTRTPTLRCFWIQ*HLAVQI
Trigger: AATCTGCACAGCCAAGTGGCACTGAATCCAGAAGCA...GCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp CACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGTCAGATTTCCCGTGCTaGTTGTGTAAATCTTACGAG +
Preference number: 2 (lower is better)
Translates to: HPQRVTRGLPHSALPTPGSDFPC*LCKSYE
Trigger: CTCGTAAGATTTACACAAGCAGCACGGGAAATCTGA...CCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR CCA 90 bp TCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACTCCTTTCATGCTTCTaGATTCAGTGCCACTTGGCT +
Preference number: 2 (lower is better)
Translates to: SHEDSHTPLFPHLGSCSKLLSCF*IQCHLA
Trigger: AGCCAAGTGGCACTGAATCCAGAAGCATGAAAGGAG...TTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR TCA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCGCTCGAAACCTCTGCTaGACAGCCTGCTTGAAAATC +
Preference number: 2 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLARNLC*TACLKI
Trigger: GATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGC...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp CAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTACGAGGAAAAGTTGTaGAGCTCCTTTCATGCTTCT +
Preference number: 2 (lower is better)
Translates to: QSVPSPPPEGHTRTPTLRYEEKL*SSFHAS
Trigger: AGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTA...GCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCGCCTCAGATTTCCCGTaGTGCTTGTGTAAATCTTAC +
Preference number: 2 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLASDFP*CLCKSY
Trigger: GTAAGATTTACACAAGCAGCACGGGAAATCTGAGGC...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp AGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTAAATATTTTAGGTCCACACCTGGGCTCCTaGTCGAAACCTCTGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RKRAQDRTHKHLTVNILGPHLGS*SKPLLN
Trigger: GTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGG...ACCTAAAATATTTACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR TCA 90 bp CAAGAGAGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTAAATATTGCTGAACAGCCTGCTTaGAAATCCACCGGAGTATTC +
Preference number: 2 (lower is better)
Translates to: QERKRAQDRTHKHLTVNIAEQPA*KSTGVF
Trigger: GAATACTCCGGTGGATTTTCAAGCAGGCTGTTCAGC...AATATTTACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACAAATTGTAAGGCACTaGCGGGCAGAGAGCACAGAT +
Preference number: 2 (lower is better)
Translates to: VCLDLVKRRISANESLRLQIVRH*RAESTD
Trigger: ATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTTG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTATTCTACCAAGAAGGGTaGACACAGCATCCCTGCTAT +
Preference number: 2 (lower is better)
Translates to: VCLDLVKRRISANESLRLFYQEG*TQHPCY
Trigger: ATAGCAGGGATGCTGTGTTCACCCTTCTTGGTAGAA...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp TGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATACGAGGAAAAGTTGTaGAGCTCCTTTCATGCTTCT +
Preference number: 2 (lower is better)
Translates to: CLKIHRSILLIRKCLGLRYEEKL*SSFHAS
Trigger: AGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTA...TCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR CCA 90 bp TTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTCTCCTTTCATGCTTCTaGATTCAGTGCCACTTGGCT +
Preference number: 2 (lower is better)
Translates to: LKIHRSILLIRKCLGLRFLLSCF*IQCHLA
Trigger: AGCCAAGTGGCACTGAATCCAGAAGCATGAAAGGAG...AAATCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACACATTTTATCAACTTaGCATCGCGCCTCCTATAGA +
Preference number: 2 (lower is better)
Translates to: VCLDLVKRRISANESLRLHILST*HRASYR
Trigger: TCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp TTTCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGGAACCCTGTCCTCTaGTGGGTATCTCAGGACGTA +
Preference number: 2 (lower is better)
Translates to: FPSIIRSFVSLKPFPSSFWNPVL*WVSQDV
Trigger: TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCA...AAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
3UTR-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACATTGCCCAATTTGTTaGAAGCATTTTTACTGGAAC +
Preference number: 2 (lower is better)
Translates to: VCLDLVKRRISANESLRLHCPIC*KHFYWN
Trigger: GTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTATTTGTGCACTTTAAATaGCACGATTGTGAATCACAC +
Preference number: 2 (lower is better)
Translates to: VCLDLVKRRISANESLRLFVHFK*HDCESH
Trigger: GTGTGATTCACAATCGTGGCATTTAAAGTGCACAAA...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCATTGCCCAATTTGTTaGAAGCATTTTTACTGGAAC +
Preference number: 2 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIHCPIC*KHFYWN
Trigger: GTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCATTGCCCAATTTGTTaGAAGCATTTTTACTGGAAC +
Preference number: 2 (lower is better)
Translates to: EISHILSTCHRASYRLYFHCPIC*KHFYWN
Trigger: GTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTTGTGCACTTTAAATaGCACGATTGTGAATCACAC +
Preference number: 2 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFVHFK*HDCESH
Trigger: GTGTGATTCACAATCGTGGCATTTAAAGTGCACAAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTTCCTTTGTACTTTGTaGACTTTAAATGCCACGATT +
Preference number: 2 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIFLCTL*TLNATI
Trigger: AATCGTGGCATTTAAAGTGCACAAAGTACAAAGGAA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR CAA 90 bp AGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGTACTTaGTGCACTTTAAATGCCACGATTGTGAATCACACAAGCATTGCC +
Preference number: 2 (lower is better)
Translates to: RLYFGKPNLYKFLCT*CTLNATIVNHTSIA
Trigger: GGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCACAAAGTACAAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCATTGCCCAATTTGTTaGAAGCATTTTTACTGGAAC +
Preference number: 2 (lower is better)
Translates to: IAPPIDYTSVNPICINSFHCPIC*KHFYWN
Trigger: GTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTTTGTGCACTTTAAATaGCACGATTGTGAATCACAC +
Preference number: 2 (lower is better)
Translates to: IAPPIDYTSVNPICINSFFVHFK*HDCESH
Trigger: GTGTGATTCACAATCGTGGCATTTAAAGTGCACAAA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTTCCTTTGTACTTTGTaGACTTTAAATGCCACGATT +
Preference number: 2 (lower is better)
Translates to: EISHILSTCHRASYRLYFFLCTL*TLNATI
Trigger: AATCGTGGCATTTAAAGTGCACAAAGTACAAAGGAA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR CAA 90 bp CACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGTCTTACGAGGAAAAGTaGTGCAGCTCCTTTCATGCT +
Preference number: 3 (lower is better)
Translates to: HPQRVTRGLPHSALPTPGSYEEK*CSSFHA
Trigger: AGCATGAAAGGAGCTGCACAACTTTTCCTCGTAAGA...CCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR CCA 72 bp CCTGTCCTCTGCTGGGTATCTCAGGACGTAGACAGGTaGCAGTGGGCAGGTACAGGGACAGACAAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: PVLCWVSQDVDR*QWAGTGTDKES
Trigger: ACTCTCCTTGTCTGTCCCTGTACCTGCCCACTGCCACCTGTCTACGTCCTGAGATACCCAGCAGAGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
3UTR GCA 72 bp GACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTaGTCGAAACCTCTGCTGAACAGCCTGCTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: DSHTPLFPHLGS*SKPLLNSLLEN
Trigger: ATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
3UTR CCA 72 bp TCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTaGGTATCTCAGGACGTAGACAGGTGGCAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: SKEFSKWNPVLC*VSQDVDRWQWA
Trigger: TGCCCACTGCCACCTGTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
3UTR-3UTR CAA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAGCATTGCCCAATTTGTaGAAAGCATTTTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: VCLDLVKRRISANESLRLALPNL*KAFLLE
Trigger: TTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGC...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR CAA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGCATTGCCCAATTTGTaGAAAGCATTTTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIALPNL*KAFLLE
Trigger: TTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR CAA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAGCATTGCCCAATTTGTaGAAAGCATTTTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: SHILSTCHRASYRLYFGKALPNL*KAFLLE
Trigger: TTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGC...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR-3UTR CAA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGCATTGCCCAATTTGTaGAAAGCATTTTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: IAPPIDYTSVNPICINSFALPNL*KAFLLE
Trigger: TTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGCTCTTCCCACACCTaGGCTCCTGCTCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: EGHTRTPTLRSSHTWAPARSSHT*APARNL
Trigger: GAGGTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCG...AGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp CCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTCCACACCTGGGCTCCTaGTCGAAACCTCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PEGHTRTPTLRSSHTWAPPHLGS*SKPLLN
Trigger: GTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGG...AGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp TCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACGCTCTTCCCACACCTaGGCTCCTGCTCGAAACCTC +
Preference number: 4 (lower is better)
Translates to: SHEDSHTPLFPHLGSCSKRSSHT*APARNL
Trigger: GAGGTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCG...TTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACCTCTGCTaGACAGCCTGCTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: PEGHTRTPTLRSSHTWAPARNLC*TACLKI
Trigger: GATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGC...AGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCGCTGAACAGCCTGCTTaGAAATCCACCGGAGTATTC +
Preference number: 4 (lower is better)
Translates to: QSVPSPPPEGHTRTPTLRAEQPA*KSTGVF
Trigger: GAATACTCCGGTGGATTTTCAAGCAGGCTGTTCAGC...GCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTGCTTCTGGATTCAGTaGCACTTGGCTGTGCAGATT +
Preference number: 4 (lower is better)
Translates to: VSSITTPRGSHEDSHTPLCFWIQ*HLAVQI
Trigger: AATCTGCACAGCCAAGTGGCACTGAATCCAGAAGCA...GAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTGCCTCAGATTTCCCGTaGTGCTTGTGTAAATCTTAC +
Preference number: 4 (lower is better)
Translates to: EGHTRTPTLRSSHTWAPAASDFP*CLCKSY
Trigger: GTAAGATTTACACAAGCAGCACGGGAAATCTGAGGC...AGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp CAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCCTCCTTTCATGCTTCTaGATTCAGTGCCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: QSVPSPPPEGHTRTPTLRLLSCF*IQCHLA
Trigger: AGCCAAGTGGCACTGAATCCAGAAGCATGAAAGGAG...GCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACTCGAATTGCTTTGTCTaGTCACACTGGCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: HTRTPTLRSSHTWAPARNSNCFV*SHWLYL
Trigger: TAGGTACAGCCAGTGTGATCAGACAAAGCAATTCGA...GTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp TCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVPSPPPEGHTRTPTLRSHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...AGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp AGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SQFHHHPQRVTRGLPHSAHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...AGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTCTGTTCTGTTGCCATTaGCATGATGTTTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: PEGHTRTPTLRSSHTWAPLFCCH*HDVWLY
Trigger: ATAAAGCCAAACATCATGTCAATGGCAACAGAACAG...AGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAGGCAGGACACGCCGGTaGCCCCAAGGCCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLGRTRR*PQGRSS
Trigger: GCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCC...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGCGCCAGCCGAAGGGTaGTCCCGGGGGACGGCGCTA +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIAPAEG*SRGTAL
Trigger: TAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR TCA 90 bp TCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHEDSHTPLFPHLGSCSKPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...TTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp AAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGAATGGCCGAGCGGTACTaGGTGCCATGGTCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: KRIFQVEPCPLLGISGRRMAERY*VPWSFP
Trigger: GGGGAACGACCATGGCACTCAGTACCGCTCGGCCAT...TCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp CACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACAACATGGAATTGTTCTaGACATCTGAGCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: HTRTPTLRSSHTWAPARNNMELF*TSEQTS
Trigger: AGAAGTCTGCTCAGATGTTCAGAACAATTCCATGTT...GTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGGCAGGACACGCCGGTaGCCCCAAGGCCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIGRTRR*PQGRSS
Trigger: GCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCAGTGCCACTTGGCTGTaGAGATTTCTAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSSITTPRGSHEDSHTPLSATWL*RFLKAF
Trigger: AAAAGCTTTTAGAAATCTGCACAGCCAAGTGGCACT...GAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp ACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGTCAGATTTCCCGTGCTaGTTGTGTAAATCTTACGAG +
Preference number: 4 (lower is better)
Translates to: TVSSITTPRGSHEDSHTPSDFPC*LCKSYE
Trigger: CTCGTAAGATTTACACAAGCAGCACGGGAAATCTGA...CGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCGCTGCTGGCGGGGCTaGAGGCCGCCCGTAATCGAG +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIRCWRG*RPPVIE
Trigger: CTCGATTACGGGCGGCCTCCAGCCCCGCCAGCAGCG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGCGCCAGCCGAAGGGTaGTCCCGGGGGACGGCGCTA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFAPAEG*SRGTAL
Trigger: TAGCGCCGTCCCCCGGGACCACCCTTCGGCTGGCGC...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGGGTGGCCGAGAGCATaGGAGGGCGCCAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIGWPRA*EGASRR
Trigger: CCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGGCAAGCCCTCCGGGTaGCCGAGAGCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIGKPSG*PRAWEG
Trigger: GCCCTCCCATGCTCTCGGCCACCCGGAGGGCTTGCC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACCCATGGTCGTTCCCCTaGCGCATACCTTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: DSKEFSKWNPVLCWVSQDPWSFP*RIPWVG
Trigger: CCCGACCCAAGGTATGCGCCAGGGGAACGACCATGG...GTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp CAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCCTGTTGCCATTGACATaGTGTTTGGCTTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: QSVPSPPPEGHTRTPTLRLLPLT*CLALSN
Trigger: ATTTGATAAAGCCAAACATCATGTCAATGGCAACAG...GCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAGGCAGGACACGCCGGTaGCCCCAAGGCCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKGRTRR*PQGRSS
Trigger: GCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCC...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GTTTTGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGTGCTTCTGGATTCAGTaGCACTTGGCTGTGCAGATT +
Preference number: 4 (lower is better)
Translates to: VLQTIQSVPSPPPEGHTRCFWIQ*HLAVQI
Trigger: AATCTGCACAGCCAAGTGGCACTGAATCCAGAAGCA...CCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCGGAACGGCAGAGAGTaGGGTCCGCGGCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFRNGRE*GPRPEP
Trigger: CGGTTCCGGCCGCGGACCCCACTCTCTGCCGTTCCG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGGTGGCCGAGAGCATaGGAGGGCGCCAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFGWPRA*EGASRR
Trigger: CCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCC...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACCCGGCAAGGCCTCCTaGGGGCTGACGATGTTCGAG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLPGKAS*GLTMFE
Trigger: CTCGAACATCGTCAGCCCCCAGGAGGCCTTGCCGGG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp TCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTACAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SKEFSKWNPVLCWVSQDVQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp TCACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAAAAAACCAACTTGAGTTaGATACACTCCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SHEDSHTPLFPHLGSCSKKTNLS*IHSFQD
Trigger: GTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTT...TTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp AAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KRIFQVEPCPLLGISGRRPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...TCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp ATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: IQKNFPSGTLSSAGYLRTPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...CGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGGCAGGACACGCCGGTaGCCCCAAGGCCGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFGRTRR*PQGRSS
Trigger: GCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACCATCTTCCCTCCGTCTaGAGCCCAGTCTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDHLPSV*SPVCVL
Trigger: GAGAACACAGACTGGGCTGCAGACGGAGGGAAGATG...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR GCA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCTCAGATTTCCCGTGCTaGTTGTGTAAATCTTACGAG +
Preference number: 4 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLSDFPC*LCKSYE
Trigger: CTCGTAAGATTTACACAAGCAGCACGGGAAATCTGA...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp ATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTCCACACCTGGGCTCCTaGTCGAAACCTCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: MSGPQISRAACVNLTRKSPHLGS*SKPLLN
Trigger: GTTCAGCAGAGGTTTCGAGCAGGAGCCCAGGTGTGG...ACTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGAGGCCCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp CACACGAGGACTCCCACACTCCGCTCTTCCCACACCTGGGCTCCTGCTCGAAACGTTTTAGGGTATATGTaGACAATGTGCAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: HTRTPTLRSSHTWAPARNVLGYM*TMCRFI
Trigger: AATAAACCTGCACATTGTGCACATATACCCTAAAAC...GTTTCGAGCAGGAGCCCAGGTGTGGGAAGAGCGGAGTGTGGGAGTCCTCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCGCTGCTGGCGGGGCTaGAGGCCGCCCGTAATCGAG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFRCWRG*RPPVIE
Trigger: CTCGATTACGGGCGGCCTCCAGCCCCGCCAGCAGCG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGGCAAGCCCTCCGGGTaGCCGAGAGCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFGKPSG*PRAWEG
Trigger: GCCCTCCCATGCTCTCGGCCACCCGGAGGGCTTGCC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACCATGGTCGTTCCCCTaGCGCATACCTTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLPWSFP*RIPWVG
Trigger: CCCGACCCAAGGTATGCGCCAGGGGAACGACCATGG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RFKRIFQVEPCPLLGISGQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...TCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGTAGACAGGTGGCAGTaGGCAGGTACAGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SKEFSKWNPVLCWVSQDVVDRWQ*AGTGTD
Trigger: GTCTGTCCCTGTACCTGCCCACTGCCACCTGTCTAC...TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCGGATTCAGTGCCACTTaGCTGTGCAGATTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLGFSAT*LCRFLK
Trigger: TTTTAGAAATCTGCACAGCCAAGTGGCACTGAATCC...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCAGGCCTCCTGGGGGCTaGCGATGTTCGAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFRPPGG*RCSRPS
Trigger: ACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR GCA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACTGGAACCCTGTCCTCTaGTGGGTATCTCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDWNPVL*WVSQDV
Trigger: TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCA...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR GCA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCAGTGCCACTTGGCTGTaGAGATTTCTAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLSATWL*RFLKAF
Trigger: AAAAGCTTTTAGAAATCTGCACAGCCAAGTGGCACT...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp TCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCTGTTTTAGGGTATATGTaGACAATGTGCAGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SVPSPPPEGHTRTPTLRSVLGYM*TMCRFI
Trigger: AATAAACCTGCACATTGTGCACATATACCCTAAAAC...AGAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCCCGGCAAGGCCTCCTaGGGGCTGACGATGTTCGAG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFPGKAS*GLTMFE
Trigger: CTCGAACATCGTCAGCCCCCAGGAGGCCTTGCCGGG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: DSKEFSKWNPVLCWVSQDLPPFA*QRSGRW
Trigger: CCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAG...GTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTAGGCCTCCTGGGGGCTaGCGATGTTCGAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFRPPGG*RCSRPS
Trigger: ACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCATGGCCGAGCGGTACTaGGTGCCATGGTCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFMAERY*VPWSFP
Trigger: GGGGAACGACCATGGCACTCAGTACCGCTCGGCCAT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAATGGCCGAGCGGTACTaGGTGCCATGGTCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKMAERY*VPWSFP
Trigger: GGGGAACGACCATGGCACTCAGTACCGCTCGGCCAT...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGCCCGTAATCGAGGTTaGCCAAACCCGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFARNRG*PNPGPY
Trigger: GTACGGCCCCGGGTTTGGGCAACCTCGATTACGGGC...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTTCGAGGCCGAGTTaGCCATCCTCGGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPICSRPS*PSSGRE
Trigger: TTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCCGAGCGGTACTGAGTaGCATGGTCGTTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFPSGTE*HGRSPG
Trigger: GCCAGGGGAACGACCATGGCACTCAGTACCGCTCGG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTATTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SKEFSKWNPVLCWVSQDVFGAQG*LHLLGR
Trigger: TCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAA...TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR GCA 90 bp TGTGAGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCCATCTTCCCTCCGTCTaGAGCCCAGTCTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: CEIQKNFPSGTLSSAGYLHLPSV*SPVCVL
Trigger: GAGAACACAGACTGGGCTGCAGACGGAGGGAAGATG...GAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCATGGTCGTTCCCCTaGCGCATACCTTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKPWSFP*RIPWVG
Trigger: CCCGACCCAAGGTATGCGCCAGGGGAACGACCATGG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGAACCCTGTCCTCTGCTaGGTATCTCAGGACGTAGAC +
Preference number: 4 (lower is better)
Translates to: IQKNFPSGTLSSAGYLRTNPVLC*VSQDVD
Trigger: GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTT...CGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACTCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDSPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTATGGCCGAGCGGTACTaGGTGCCATGGTCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFMAERY*VPWSFP
Trigger: GGGGAACGACCATGGCACTCAGTACCGCTCGGCCAT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTGTTCGAGGCCGAGTTaGCCATCCTCGGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFCSRPS*PSSGRE
Trigger: TTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCGAGCGGTACTGAGTaGCATGGTCGTTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPSGTE*HGRSPG
Trigger: GCCAGGGGAACGACCATGGCACTCAGTACCGCTCGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TGTGAGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCTTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CEIQKNFPSGTLSSAGYLFGAQG*LHLLGR
Trigger: TCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAA...GAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TGTGAGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCCTCATGTGTTCTGGCTaGTACACCACTCGGACGACT +
Preference number: 4 (lower is better)
Translates to: CEIQKNFPSGTLSSAGYLLMCSG*YTTRTT
Trigger: AGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAG...GAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCATGGTCGTTCCCCTaGCGCATACCTTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPWSFP*RIPWVG
Trigger: CCCGACCCAAGGTATGCGCCAGGGGAACGACCATGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFQRSGR*PSGTEC
Trigger: GCACTCAGTACCGCTCGGCCATCTACCCGACCTCTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTTTGGTAGTTCTCTTTaGAGCTCAGGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IQKNFPSGTLSSAGYLRTFGSSL*SSGLPP
Trigger: TGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAA...CGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAGGCCGCAGTAGCCATTaGGGTTCTTGCTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLGRSSH*GSCSGT
Trigger: AGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCC...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TGTGAGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAACCCTGTCCTCTGCTaGGTATCTCAGGACGTAGAC +
Preference number: 4 (lower is better)
Translates to: CEIQKNFPSGTLSSAGYLNPVLC*VSQDVD
Trigger: GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTT...GAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACTGTTGCCATTGACATaGTGTTTGGCCGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLLLPLT*CLAATG
Trigger: CCCTGTAGCGGCCAAACATCATGTCAATGGCAACAG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGTCTTATGGCCGAGCGGTACTaGGTGCCATGGTCGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SIIRSFVSLKPFPSSFCLMAERY*VPWSFP
Trigger: GGGGAACGACCATGGCACTCAGTACCGCTCGGCCAT...AAGACAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACGTTCTCTTCTTCCAGTaGACATGCTTGGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDVLFFQ*TCLGTF
Trigger: AAAGGTACCCAAGCATGTTCACTGGAAGAAGAGAAC...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp TATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAGCTCGAAACCTCTGCTaGACAGCCTGCTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: YSVDKEMSGPQISRAACVARNLC*TACLKI
Trigger: GATTTTCAAGCAGGCTGTTCAGCAGAGGTTTCGAGC...TACACAAGCAGCACGGGAAATCTGAGGCCCAGACATTTCCTTATCAACAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTATTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLFGAQG*LHLLGR
Trigger: TCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAA...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAATGGGGCCGAAGCCGTaGTCTGAAAGAACCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLMGPKP*SERTFW
Trigger: CCAAAAGGTTCTTTCAGAGCACGGCTTCGGCCCCAT...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAAGCCATTGGGGTTCTTaGTCAGGTACTGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLSHWGS*SGTAGG
Trigger: ACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCT...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACTCATGTGTTCTGGCTaGTACACCACTCGGACGACT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLLMCSG*YTTRTT
Trigger: AGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGTCTTCCATGGTCGTTCCCCTaGCGCATACCTTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SIIRSFVSLKPFPSSFCLPWSFP*RIPWVG
Trigger: CCCGACCCAAGGTATGCGCCAGGGGAACGACCATGG...AAGACAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPILPPFA*QRSGRW
Trigger: CCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGGCCGCAGTAGCCATTaGGGTTCTTGCTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIGRSSH*GSCSGT
Trigger: AGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
3UTR CAA 72 bp TTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTaGTGCAGCTCCTTTCATGCTTCTGGATTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FPCCLCKSYEEK*CSSFHASGFSA
Trigger: GGCACTGAATCCAGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCTTGGGTCGGGTCGTaGTTCTCCCAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPWVGS*FSQKTL
Trigger: CAAGGTCTTCTGGGAGAATCACGACCCGACCCAAGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAGCCGAAGCCGTGCTCTaGAAGAACCTTTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLAEAVL*KNLLVV
Trigger: AACTACCAAAAGGTTCTTTCAGAGCACGGCTTCGGC...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCATGGGGCCGAAGCCGTaGTCTGAAAGAACCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIMGPKP*SERTFW
Trigger: CCAAAAGGTTCTTTCAGAGCACGGCTTCGGCCCCAT...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCAGCCATTGGGGTTCTTaGTCAGGTACTGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPISHWGS*SGTAGG
Trigger: ACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCT...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCTCATGTGTTCTGGCTaGTACACCACTCGGACGACT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPILMCSG*YTTRTT
Trigger: AGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFLPPFA*QRSGRW
Trigger: CCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAGGCCGCAGTAGCCATTaGGGTTCTTGCTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKGRSSH*GSCSGT
Trigger: AGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCC...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGGTAGACAGGTGGCAGTaGGCAGGTACAGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SFHNKVLCILKALSFIFLVDRWQ*AGTGTD
Trigger: GTCTGTCCCTGTACCTGCCCACTGCCACCTGTCTAC...CAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGACTCCTTTCATGCTTCTaGATTCAGTGCCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLKIHRSILLIRKCLGLRLLSCF*IQCHLA
Trigger: AGCCAAGTGGCACTGAATCCAGAAGCATGAAAGGAG...TCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTCCCGTGCTAAAACCAACTTGAGTTaGATACACTCCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: PPEYSVDKEMSGPQISRAKTNLS*IHSFQD
Trigger: GTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTT...AGCACGGGAAATCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp CAAGAGAGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTAAATATTCCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QERKRAQDRTHKHLTVNIPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...AATATTTACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTATCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLSPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCGCCGAAGCCGTGCTCTaGAAGAACCTTTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIAEAVL*KNLLVV
Trigger: AACTACCAAAAGGTTCTTTCAGAGCACGGCTTCGGC...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTAAATATTTTAGGTTCGAATTGCTTTGTCTaGTCACACTGGCTGTACCTA +
Preference number: 4 (lower is better)
Translates to: RKRAQDRTHKHLTVNILGSNCFV*SHWLYL
Trigger: TAGGTACAGCCAGTGTGATCAGACAAAGCAATTCGA...ACCTAAAATATTTACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFFGAQG*LHLLGR
Trigger: TCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFGAQG*LHLLGR
Trigger: TCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAAGCCATTGGGGTTCTTaGTCAGGTACTGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKSHWGS*SGTAGG
Trigger: ACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCT...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp ATTTTACAAGAGAGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTATACGAGGAAAAGTTGTaGAGCTCCTTTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILQERKRAQDRTHKHLTVYEEKL*SSFHAS
Trigger: AGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTA...TACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCTCTCTTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp AATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTACGAGGAAAAGTTGTaGAGCTCCTTTCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: NVWASDFPCCLCKSYEEKYEEKL*SSFHAS
Trigger: AGAAGCATGAAAGGAGCTGCACAACTTTTCCTCGTA...CTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGAGGCCCAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp TATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAGCCTCAGATTTCCCGTaGTGCTTGTGTAAATCTTAC +
Preference number: 4 (lower is better)
Translates to: YSVDKEMSGPQISRAACVASDFP*CLCKSY
Trigger: GTAAGATTTACACAAGCAGCACGGGAAATCTGAGGC...TACACAAGCAGCACGGGAAATCTGAGGCCCAGACATTTCCTTATCAACAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACTGGTGTCTTCAGCTTaGCTTTCTGGTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLLVSSA*LSGLQC
Trigger: ACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACTCATGTGTTCTGGCTaGTACACCACTCGGACGACT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKLMCSG*YTTRTT
Trigger: AGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFLPPFA*QRSGRW
Trigger: CCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SFHNKVLCILKALSFIFLLPPFA*QRSGRW
Trigger: CCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAG...CAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTTTGGTAGTTCTCTTTaGAGCTCAGGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIFGSSL*SSGLPP
Trigger: TGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGGCCGCAGTAGCCATTaGGGTTCTTGCTCAGGTACT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFGRSSH*GSCSGT
Trigger: AGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCAAATTGTAAGGCACTaGCGGGCAGAGAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIQIVRH*RAESTD
Trigger: ATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTTG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTGGATTCAGTGCCACTTaGCTGTGCAGATTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: MSGPQISRAACVNLTRKSGFSAT*LCRFLK
Trigger: TTTTAGAAATCTGCACAGCCAAGTGGCACTGAATCC...ACTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGAGGCCCAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPISPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAGCCGAAGCCGTGCTCTaGAAGAACCTTTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKAEAVL*KNLLVV
Trigger: AACTACCAAAAGGTTCTTTCAGAGCACGGCTTCGGC...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTTCTACCAAGAAGGGTaGACACAGCATCCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIFYQEG*TQHPCY
Trigger: ATAGCAGGGATGCTGTGTTCACCCTTCTTGGTAGAA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCAGCGAATGAGTCACTaGGGCTATACACGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIQRMSH*GYTRLQ
Trigger: TTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGTCTGTTCTGTTGCCATTaGCATGATGTTTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: MSGPQISRAACVNLTRKSLFCCH*HDVWLY
Trigger: ATAAAGCCAAACATCATGTCAATGGCAACAGAACAG...ACTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGAGGCCCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACAAAAGAAGCTGATTTaGCTGAGCTGTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLQKKLI*LSCAKS
Trigger: AGACTTGGCACAGCTCAGTCAAATCAGCTTCTTTTG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTATGGGGCCGAAGCCGTaGTCTGAAAGAACCTTTTGG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFMGPKP*SERTFW
Trigger: CCAAAAGGTTCTTTCAGAGCACGGCTTCGGCCCCAT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACTCACATCTTTTCTCTaGACAGAGAGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLLTSFL*TERAEK
Trigger: CTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGTGGAACCCTGTCCTCTaGTGGGTATCTCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: SFHNKVLCILKALSFIFLWNPVL*WVSQDV
Trigger: TACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCA...CAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCTCATGTGTTCTGGCTaGTACACCACTCGGACGACT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFLMCSG*YTTRTT
Trigger: AGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACAAATTGTAAGGCACTaGCGGGCAGAGAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKQIVRH*RAESTD
Trigger: ATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGATCCAGTGAACATGCTTaGGTACCTTTTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RFKRIFQVEPCPLLGISGSSEHA*VPFGSS
Trigger: AGAACTACCAAAAGGTACCCAAGCATGTTCACTGGA...TCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCTGTTCTGTTGCCATTaGCATGATGTTTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFLFCCH*HDVWPL
Trigger: TAGCGGCCAAACATCATGTCAATGGCAACAGAACAG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACTGTTCTGTTGCCATTaGCATGATGTTTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKLFCCH*HDVWPL
Trigger: TAGCGGCCAAACATCATGTCAATGGCAACAGAACAG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKSPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGCCGAAGCCGTGCTCTaGAAGAACCTTTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFAEAVL*KNLLVV
Trigger: AACTACCAAAAGGTTCTTTCAGAGCACGGCTTCGGC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTCTACCAAGAAGGGTaGACACAGCATCCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFYQEG*TQHPCY
Trigger: ATAGCAGGGATGCTGTGTTCACCCTTCTTGGTAGAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACAGCGAATGAGTCACTaGGGCTATACACGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKQRMSH*GYTRLQ
Trigger: TTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCAGCGAATGAGTCACTaGGGCTATACACGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFQRMSH*GYTRLQ
Trigger: TTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCTGTTGCCATTGACATaGTGTTTGGGTTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPILLPLT*CLGSEH
Trigger: GTGTTCAGAACCCAAACATCATGTCAATGGCAACAG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382490.9
ENST00000643047.1
CDS-3UTR TCA 90 bp AATGTCTGGGCCTCAGATTTCCCGTGCTGCTTGTGTAAATCTTACGAGGAAAAGCTGTTGCCATTGACATaGTGTTTGGCTTTATCAAAT +
Preference number: 4 (lower is better)
Translates to: NVWASDFPCCLCKSYEEKLLPLT*CLALSN
Trigger: ATTTGATAAAGCCAAACATCATGTCAATGGCAACAG...CTTTTCCTCGTAAGATTTACACAAGCAGCACGGGAAATCTGAGGCCCAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR TCA 90 bp TGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGAAACATGGAATTGTTCTaGACATCTGAGCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: CLKIHRSILLIRKCLGLRNMELF*TSEQTS
Trigger: AGAAGTCTGCTCAGATGTTCAGAACAATTCCATGTT...TCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTTTGGTAGTTCTCTTTaGAGCTCAGGGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFFGSSL*SSGLPP
Trigger: TGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCAAATTGTAAGGCACTaGCGGGCAGAGAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFQIVRH*RAESTD
Trigger: ATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTTG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCTTCAAGCGAAGTCTaGTGTCTTCAGCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKPSSEV*CLQLAF
Trigger: AAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAGG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFSPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTTCTACCAAGAAGGGTaGACACAGCATCCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFFYQEG*TQHPCY
Trigger: ATAGCAGGGATGCTGTGTTCACCCTTCTTGGTAGAA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCAGCGAATGAGTCACTaGGGCTATACACGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFQRMSH*GYTRLQ
Trigger: TTGCAAACGTGTATAGCCTCAGTGACTCATTCGCTG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCAAGGATTTCAGCGAATaGGTCACTGAGGCTATACAC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFKDFSE*VTEAIH
Trigger: GTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAAAGGATTTCAGCGAATaGGTCACTGAGGCTATACAC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKKDFSE*VTEAIH
Trigger: GTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTT...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACGAAGGATGTCTTTCTaGTTTGATTTGAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLRRMSF*FDLKAG
Trigger: ACCTGCTTTCAAATCAAATCAGAAAGACATCCTTCG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCATGATGTTTGGGTTCTaGACACATTCCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIMMFGF*THSEGC
Trigger: ACATCCTTCGGAATGTGTTCAGAACCCAAACATCAT...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382490.9
ENST00000643047.1
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACTGTTCTGTTGCCATTaGCATGATGTTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKLFCCH*HDVWVL
Trigger: CAGAACCCAAACATCATGTCAATGGCAACAGAACAG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382490.9
ENST00000643047.1
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCAAAAGAAGCTGATTTaGCTGAGCTGTGCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFQKKLI*LSCAKS
Trigger: AGACTTGGCACAGCTCAGTCAAATCAGCTTCTTTTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACTCACATCTTTTCTCTaGACAGAGAGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKLTSFL*TERAEK
Trigger: CTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCTCACATCTTTTCTCTaGACAGAGAGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFLTSFL*TERAEK
Trigger: CTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFHLCSL*ERFDCS
Trigger: AGAACAGTCGAACCTTTCCCAGAGGGAACACAGATG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTATATTTCCCAAATGCATaGACACTATGGAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLYFPNA*TLWKLR
Trigger: ACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATA...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCTTCAAGCGAAGTCTaGTGTCTTCAGCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPSSEV*CLQLAF
Trigger: AAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR TCA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAAAAACCAACTTGAGTTaGATACACTCCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VCLDLVKRRISANESLRLKTNLS*IHSFQD
Trigger: GTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTT...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTCTCCCAGAAGACCTTaGGCAGTTCCTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: FPSIIRSFVSLKPFPSSFSPRRP*AVPQNS
Trigger: TGAGTTTTGAGGAACTGCTCAAGGTCTTCTGGGAGA...AAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTAAGGATTTCAGCGAATaGGTCACTGAGGCTATACAC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFKDFSE*VTEAIH
Trigger: GTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCGAAGGATGTCTTTCTaGTTTGATTTGAAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIRRMSF*FDLKAG
Trigger: ACCTGCTTTCAAATCAAATCAGAAAGACATCCTTCG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCATGATGTTTGGGTTCTaGACACATTCCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFMMFGF*THSEGC
Trigger: ACATCCTTCGGAATGTGTTCAGAACCCAAACATCAT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382490.9
ENST00000643047.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCTGTTCTGTTGCCATTaGCATGATGTTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFLFCCH*HDVWVL
Trigger: CAGAACCCAAACATCATGTCAATGGCAACAGAACAG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382490.9
ENST00000643047.1
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAGTCACTAATTGGTTCTaGACACATTCCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKVTNWF*THSEGC
Trigger: ACATCCTTCGGAATGTGTTCAGAACCAATTAGTGAC...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACACATTTTATCAACTTaGCATCGCGCCTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKHILST*HRASYR
Trigger: TCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCACATTTTATCAACTTaGCATCGCGCCTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFHILST*HRASYR
Trigger: TCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCTCACATCTTTTCTCTaGACAGAGAGGGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFLTSFL*TERAEK
Trigger: CTTTTCAGCCCTCTCTGTGCAGAGAAAAGATGTGAG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTTTGGATTTCTTGTTTaGCCTTCAAGCGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFFGFLV*PSSEVW
Trigger: CCAGACTTCGCTTGAAGGGCAAACAAGAAATCCAAA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTTGGATTTCTTGTTTaGCCTTCAAGCGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFGFLV*PSSEVW
Trigger: CCAGACTTCGCTTGAAGGGCAAACAAGAAATCCAAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR CCA 90 bp TCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGTCTTAAAACTCATGTGTTCTaGCTGGTACACCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: SIIRSFVSLKPFPSSFCLKTHVF*LVHHSD
Trigger: GTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTT...AAGACAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTCAGCTTGCCTTTCTaGTCTTCAGTGTTGTCACTA +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFSLPF*SSVLSL
Trigger: TAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR CCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTTCAGCTTGCCTTTCTaGTCTTCAGTGTTGTCACTA +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFFSLPF*SSVLSL
Trigger: TAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCTGCAAAACCAACTTaGGTTGAATACACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPAKPT*VEYTPF
Trigger: GAAAGGAGTGTATTCAACTCAAGTTGGTTTTGCAGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTGTCACTAATTGGTTCTaGACACATTCCGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFVTNWF*THSEGC
Trigger: ACATCCTTCGGAATGTGTTCAGAACCAATTAGTGAC...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR TCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCTGTTCTGTTGCCATTaGCATGATGTTTGGATTTCT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFLFCCH*HDVWIS
Trigger: AGAAATCCAAACATCATGTCAATGGCAACAGAACAG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTTTGTGCACTTTAAATaGCACGATTGTGAATCACAC +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIFVHFK*HDCESH
Trigger: GTGTGATTCACAATCGTGGCATTTAAAGTGCACAAA...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCACATTTTATCAACTTaGCATCGCGCCTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFHILST*HRASYR
Trigger: TCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCATAGTATTTCCCAAATaGATGGACACTATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIIVFPK*MDTMEA
Trigger: AGCTTCCATAGTGTCCATGCATTTGGGAAATACTAT...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR CCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATATTTCCCAAATGCATaGACACTATGGAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKYFPNA*TLWKLR
Trigger: ACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAAAAACCAACTTGAGTTaGATACACTCCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKKTNLS*IHSFQD
Trigger: GTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTT...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACTGTTGCCATTGACATaGTGTTTGGATTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKLLPLT*CLDFLF
Trigger: AAACAAGAAATCCAAACATCATGTCAATGGCAACAG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCTTTGTGCACTTTAAATaGCACGATTGTGAATCACAC +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFFVHFK*HDCESH
Trigger: GTGTGATTCACAATCGTGGCATTTAAAGTGCACAAA...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCATAGTATTTCCCAAATaGATGGACACTATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: EISHILSTCHRASYRLYFIVFPK*MDTMEA
Trigger: AGCTTCCATAGTGTCCATGCATTTGGGAAATACTAT...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR CCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTATTTCCCAAATGCATaGACACTATGGAAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFYFPNA*TLWKLR
Trigger: ACGAAGCTTCCATAGTGTCCATGCATTTGGGAAATA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
CDS-3UTR CCA 90 bp TTTCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTCCAGTGAACATGCTTaGGTACCTTTTGGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: FPSIIRSFVSLKPFPSSFSSEHA*VPFGSS
Trigger: AGAACTACCAAAAGGTACCCAAGCATGTTCACTGGA...AAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTAAAACCAACTTGAGTTaGATACACTCCTTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFKTNLS*IHSFQD
Trigger: GTCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR TCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCTGTTGCCATTGACATaGTGTTTGGATTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFLLPLT*CLDFLF
Trigger: AAACAAGAAATCCAAACATCATGTCAATGGCAACAG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR GCA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAATTCCTTTGTACTTTGTaGACTTTAAATGCCACGATT +
Preference number: 4 (lower is better)
Translates to: SHILSTCHRASYRLYFGKFLCTL*TLNATI
Trigger: AATCGTGGCATTTAAAGTGCACAAAGTACAAAGGAA...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR GCA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTTTCCTTTGTACTTTGTaGACTTTAAATGCCACGATT +
Preference number: 4 (lower is better)
Translates to: IAPPIDYTSVNPICINSFFLCTL*TLNATI
Trigger: AATCGTGGCATTTAAAGTGCACAAAGTACAAAGGAA...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS CCA 90 bp TTGGCCGCTACAGGGGTCTGTTCCTTCCGGCCCGGCAAGGCCTCCTaGGGGCTGACGATGTTCGAGGCCGAGTTGCCCATCCTCGGGACG +
Preference number: 5 (lower is better)
Translates to: LAATGVCSFRPGKAS*GLTMFEAELPILGT
Trigger: CGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTGCCGGGCCGGAAGGAACAGACCCCTGTAGCGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000441698.6
ENST00000518255.5
ENST00000643332.1
ENST00000645318.2
ENST00000647411.1
CDS CCA 90 bp TGGAGCTCAGGGCTGCCTCCATTTGCTTGGCAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGCCATGGTCGTTCCCCTGGCGCATAC +
Preference number: 5 (lower is better)
Translates to: WSSGLPPFAWQRSGR*PSGTECHGRSPGAY
Trigger: GTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
CDS GCA 90 bp CCATTTGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTaGCATGGTCGTTCCCCTGGCGCATACCTTGGGTCGGGTCGTGAT +
Preference number: 5 (lower is better)
Translates to: PFAWQRSGRWPSGTE*HGRSPGAYLGSGRD
Trigger: ATCACGACCCGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
CDS GCA 90 bp AGGACACGCCGGTGCCCCCAAGGCCGCAGTAGCCATTGGGGTTCTTaGTCAGGTACTGCTGGTGGTAGTCTTCCGCATAGTAGAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RTRRCPQGRSSHWGS*SGTAGGSLPHSRKS
Trigger: AGACTTTCTACTATGCGGAAGACTACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000528246.5
ENST00000643047.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
CDS GCA 90 bp ACAGGGAAGCACCAGCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: TGKHQLLVVLFGAQG*LHLLGRGRVDGRAV
Trigger: TACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGCTGGTGCTTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518255.5
ENST00000647411.1
CDS GCA 90 bp CCCAGCAATCCCTACCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: PSNPYLLVVLFGAQG*LHLLGRGRVDGRAV
Trigger: TACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTAGGGATTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523637.2
ENST00000643317.1
CDS CCA 90 bp CCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCCATGGT +
Preference number: 5 (lower is better)
Translates to: PFGSSLWSSGLPPFA*QRSGRWPSGTECHG
Trigger: ACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
CDS CCA 90 bp GCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCCATGGT +
Preference number: 5 (lower is better)
Translates to: AFGSSLWSSGLPPFA*QRSGRWPSGTECHG
Trigger: ACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518255.5
ENST00000647411.1
CDS CCA 90 bp AAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACAGGTaGCAGTGGGCAGGTACAGGGACAGACAAGGAGAGTCCCTATACT +
Preference number: 5 (lower is better)
Translates to: KWNPVLCWVSQDVDR*QWAGTGTDKESPYT
Trigger: AGTATAGGGACTCTCCTTGTCTGTCCCTGTACCTGCCCACTGCCACCTGTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp GTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCCACACTCCGCTCGATTTCCCGTGCTGCTaGTGTAAATCTTACGAGGAA +
Preference number: 5 (lower is better)
Translates to: VSSITTPRGSHEDSHTPLDFPCC*CKSYEE
Trigger: TTCCTCGTAAGATTTACACAAGCAGCACGGGAAATC...GAGCGGAGTGTGGGAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS GCA 90 bp AACATGCTTGGGTACCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTaGCTCCATTTGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTA +
Preference number: 5 (lower is better)
Translates to: NMLGYLLVVLFGAQG*LHLLGRGRVDGRAV
Trigger: TACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTACCCAAGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp AAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: KEFSKWNPVLCWVSQDVDQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...GTCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS TCA 90 bp AGAGGACGGCCCACAAAAGGCTGTTTTCCTGTGATACTGTCAGCGTaGCGTCTCAAAGCTGCAGGTGATAGCATGCCTGGCATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: RGRPTKGCFPVILSA*RLKAAGDSMPGILA
Trigger: TGCTAGAATGCCAGGCATGCTATCACCTGCAGCTTTGAGACGTCACGCTGACAGTATCACAGGAAAACAGCCTTTTGTGGGCCGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517594.1
ENST00000642775.1
CDS-3UTR CAA 90 bp AGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACCCCTGGCGCATACCTaGGGTCGGGTCGTGATTCTC +
Preference number: 5 (lower is better)
Translates to: RFKRIFQVEPCPLLGISGPLAHT*GRVVIL
Trigger: GAGAATCACGACCCGACCCAAGGTATGCGCCAGGGG...TCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp AAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGTAGACAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: KRIFQVEPCPLLGISGRRQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...TCTACGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTACCCCTGGCGCATACCTaGGGTCGGGTCGTGATTCTC +
Preference number: 5 (lower is better)
Translates to: VCLDLVKRRISANESLRLPLAHT*GRVVIL
Trigger: GAGAATCACGACCCGACCCAAGGTATGCGCCAGGGG...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp GTTTTGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGAGTTCTCGAATTGCTTaGTCTGATCACACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: VLQTIQSVPSPPPEGHTRSSRIA*SDHTGC
Trigger: ACAGCCAGTGTGATCAGACAAAGCAATTCGAGAACT...CCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp TGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGACTCCAAAACCAACTTGAGTaGAATACACTCCTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: CRPYSQFHHHPQRVTRGLQNQLE*NTLLSR
Trigger: TCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTG...GAGTCCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCCCCTGGCGCATACCTaGGGTCGGGTCGTGATTCTC +
Preference number: 5 (lower is better)
Translates to: EISHILSTCHRASYRLYFPLAHT*GRVVIL
Trigger: GAGAATCACGACCCGACCCAAGGTATGCGCCAGGGG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp TTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: FYQLAIAPPIDYTSVNPIQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...GATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp GTTTTGCAGACCATACAGTCAGTTCCATCACCACCCCCAGAGGGTCACACGAGGTTTGTAGTTCTCGAATaGCTTTGTCTGATCACACTG +
Preference number: 5 (lower is better)
Translates to: VLQTIQSVPSPPPEGHTRFVVLE*LCLITL
Trigger: CAGTGTGATCAGACAAAGCAATTCGAGAACTACAAA...CCTCGTGTGACCCTCTGGGGGTGGTGATGGAACTGACTGTATGGTCTGCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS CCA 90 bp TCCCCAGAAACATCCCATTCCAAATACAGCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCTGTTGCCATTGACATGATGTTTGGC +
Preference number: 5 (lower is better)
Translates to: SPETSHSKYSHLCSL*ERFDCSVAIDMMFG
Trigger: GCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGATGTTTCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000518255.5
ENST00000521209.6
ENST00000645318.2
ENST00000647411.1
ENST00000647542.1
CDS CCA 90 bp TCCCCAGAAACATCCCATTCCAAATACAGCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCTGTTGCCATTGACATGATGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SPETSHSKYSHLCSL*ERFDCSVAIDMMFG
Trigger: CCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGATGTTTCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000523637.2
ENST00000643047.1
ENST00000643317.1
CDS-3UTR CAA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTATGTTCGAGGCCGAGTaGCCCATCCTCGGGACGGGA +
Preference number: 5 (lower is better)
Translates to: IAPPIDYTSVNPICINSFMFEAE*PILGTG
Trigger: TCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACAT...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317173.9
ENST00000645318.2
CDS-3UTR CAA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCCCCTGGCGCATACCTaGGGTCGGGTCGTGATTCTC +
Preference number: 5 (lower is better)
Translates to: IAPPIDYTSVNPICINSFPLAHT*GRVVIL
Trigger: GAGAATCACGACCCGACCCAAGGTATGCGCCAGGGG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp TCCTTCCATAATAAGGTCCTTTGTATCCTTAAAGCCCTTTCCTTCATCTTTTTGCCCCTGGCGCATACCTaGGGTCGGGTCGTGATTCTC +
Preference number: 5 (lower is better)
Translates to: SFHNKVLCILKALSFIFLPLAHT*GRVVIL
Trigger: GAGAATCACGACCCGACCCAAGGTATGCGCCAGGGG...CAAAAAGATGAAGGAAAGGGCTTTAAGGATACAAAGGACCTTATTATGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: EISHILSTCHRASYRLYFQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: SHILSTCHRASYRLYFGKQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp CCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTCCCGTGCTGATTTCCCGTGCTGCTaGTGTAAATCTTACGAGGAA +
Preference number: 5 (lower is better)
Translates to: PPEYSVDKEMSGPQISRADFPCC*CKSYEE
Trigger: TTCCTCGTAAGATTTACACAAGCAGCACGGGAAATC...AGCACGGGAAATCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS CCA 90 bp TCCCCAGAAACATCCCATTCCAAATACAGCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCTGTTGCCATTGACATGATGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SPETSHSKYSHLCSL*ERFDCSVAIDMMFG
Trigger: TCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGATGTTTCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS-3UTR CAA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTA +
Preference number: 5 (lower is better)
Translates to: IAPPIDYTSVNPICINSFQGCLH*LGRGRV
Trigger: TACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS CCA 90 bp TTGTTTGCCCTTCAAGCGAAGTCTGGTGTCTTCAGCTTGCCTTTCTaGTCTTCAGTGTTGTCACTAATTGGTTCTGAACACATTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LFALQAKSGVFSLPF*SSVLSLIGSEHIPK
Trigger: CTTCGGAATGTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAGGGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS-3UTR CAA 90 bp ATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCAGGACGATGCTTGGGTACCTTTaGGTAGTTCTCTTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: IQKNFPSGTLSSAGYLRTMLGYL*VVLFGA
Trigger: AGCTCCAAAGAGAACTACCAAAAGGTACCCAAGCAT...CGTCCTGAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp TGTGAGATTCAAAAGAATTTTCCAAGTGGAACCCTGTCCTCTGCTGGGTATCTCATGCTTGGGTACCTTTaGGTAGTTCTCTTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: CEIQKNFPSGTLSSAGYLMLGYL*VVLFGA
Trigger: AGCTCCAAAGAGAACTACCAAAAGGTACCCAAGCAT...GAGATACCCAGCAGAGGACAGGGTTCCACTTGGAAAATTCTTTTGAATCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS-3UTR CAA 90 bp TGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATGGATTCAGTGCCACTaGGCTGTGCAGATTTCTAAA +
Preference number: 5 (lower is better)
Translates to: CLKIHRSILLIRKCLGLRWIQCH*AVQISK
Trigger: TTTAGAAATCTGCACAGCCAAGTGGCACTGAATCCA...TCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp AGGAAACGGGCTCAGGACAGGACACATAAGCACCTGACAGTAAATATTTTAGGTTCTTACGAGGAAAAGTaGTGCAGCTCCTTTCATGCT +
Preference number: 5 (lower is better)
Translates to: RKRAQDRTHKHLTVNILGSYEEK*CSSFHA
Trigger: AGCATGAAAGGAGCTGCACAACTTTTCCTCGTAAGA...ACCTAAAATATTTACTGTCAGGTGCTTATGTGTCCTGTCCTGAGCCCGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS TCA 90 bp CCATCTGTGTTCCCTCTGGGAAAGGTTCGACTGTTCTGTTGCCATTaGCATGATGTTTGGCTTTATCAAATGCTGCATTCCCTTATGTAT +
Preference number: 5 (lower is better)
Translates to: PSVFPLGKVRLFCCH*HDVWLYQMLHSLMY
Trigger: ATACATAAGGGAATGCAGCATTTGATAAAGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp GTATGTCTAGATTTGGTAAAGCGAAGGATTTCAGCGAATGAGTCACTGAGGCTAACAAAAGAAGCTGATTaGACTGAGCTGTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VCLDLVKRRISANESLRLTKEAD*TELCQV
Trigger: GACTTGGCACAGCTCAGTCAAATCAGCTTCTTTTGT...TAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS CCA 90 bp ATTGACATGATGTTTGGATTTCTTGTTTGCCCTTCAAGCGAAGTCTaGTGTCTTCAGCTTGCCTTTCTGGTCTTCAGTGTTGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: IDMMFGFLVCPSSEV*CLQLAFLVFSVVTN
Trigger: ATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS-3UTR CAA 90 bp TTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTAGTTCTCGAATTGCTTaGTCTGATCACACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LKIHRSILLIRKCLGLRFSSRIA*SDHTGC
Trigger: ACAGCCAGTGTGATCAGACAAAGCAATTCGAGAACT...AAATCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp TGCTTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTGTAGTTCTCGAATaGCTTTGTCTGATCACACTG +
Preference number: 5 (lower is better)
Translates to: CLKIHRSILLIRKCLGLRFVVLE*LCLITL
Trigger: CAGTGTGATCAGACAAAGCAATTCGAGAACTACAAA...TCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp TTGAAAATCCACCGGAGTATTCTGTTGATAAGGAAATGTCTGGGCCTCAGATTTTGGATTCAGTGCCACTaGGCTGTGCAGATTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LKIHRSILLIRKCLGLRFWIQCH*AVQISK
Trigger: TTTAGAAATCTGCACAGCCAAGTGGCACTGAATCCA...AAATCTGAGGCCCAGACATTTCCTTATCAACAGAATACTCCGGTGGATTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS-3UTR CAA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAAACAAAAGAAGCTGATTaGACTGAGCTGTGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: SHILSTCHRASYRLYFGKTKEAD*TELCQV
Trigger: GACTTGGCACAGCTCAGTCAAATCAGCTTCTTTTGT...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528246.5
ENST00000645254.1
CDS-3UTR CAA 90 bp AGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGGTAAACAAAACCAACTTGAGTaGAATACACTCCTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SHILSTCHRASYRLYFGKQNQLE*NTLLSR
Trigger: TCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTG...TTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCCAAAACCAACTTGAGTaGAATACACTCCTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: EISHILSTCHRASYRLYFQNQLE*NTLLSR
Trigger: TCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTG...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp GAGATAAGTCACATTTTATCAACTTGCCATCGCGCCTCCTATAGATTATACTTCGCATTGCCCAATTTGTaGAAAGCATTTTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: EISHILSTCHRASYRLYFALPNL*KAFLLE
Trigger: TTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGC...GAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS-3UTR CAA 90 bp ATCGCGCCTCCTATAGATTATACTTCGGTAAACCCAATCTGTATAAATTCCTTTCAAAACCAACTTGAGTaGAATACACTCCTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: IAPPIDYTSVNPICINSFQNQLE*NTLLSR
Trigger: TCTTGAAAGGAGTGTATTCAACTCAAGTTGGTTTTG...AAAGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000528246.5
ENST00000643047.1
ENST00000645254.1
ENST00000645318.2
CDS CCA 72 bp GGAGGAGCTGGCAAGCCCTCCGGGTGGCCGAGAGCATaGGAGGGCGCCAGCCGAAGGGTGGTCCCGGGGGAC +
Preference number: 6 (lower is better)
Translates to: GGAGKPSGWPRA*EGASRRVVPGD
Trigger: GTCCCCCGGGACCACCCTTCGGCTGGCGCCCTCCCATGCTCTCGGCCACCCGGAGGGCTTGCCAGCTCCTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317173.9
ENST00000441698.6
ENST00000643332.1
ENST00000645318.2
CDS CAA 72 bp AAGGCCTCCTGGGGGCTGACGATGTTCGAGGCCGAGTaGCCCATCCTCGGGACGGGAAAGAGGCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: KASWGLTMFEAE*PILGTGKRLWR
Trigger: CCTCCACAGCCTCTTTCCCGTCCCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000441698.6
ENST00000518255.5
ENST00000643332.1
ENST00000645318.2
ENST00000647411.1
CDS GCA 72 bp TGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTaGCATGGTCGTTCCCCTGGCGCATACCTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: WQRSGRWPSGTE*HGRSPGAYLGS
Trigger: CGACCCAAGGTATGCGCCAGGGGAACGACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
CDS CCA 72 bp GGGCTGCCTCCATTTGCTTGGCAGAGGTCGGGTAGATaGCCGAGCGGTACTGAGTGCCATGGTCGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: GLPPFAWQRSGR*PSGTECHGRSP
Trigger: AGGGGAACGACCATGGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
CDS GCA 72 bp CGGTGCCCCCAAGGCCGCAGTAGCCATTGGGGTTCTTaGTCAGGTACTGCTGGTGGTAGTCTTCCGCATAGT +
Preference number: 6 (lower is better)
Translates to: RCPQGRSSHWGS*SGTAGGSLPHS
Trigger: ACTATGCGGAAGACTACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000528246.5
ENST00000643047.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
CDS CAA 90 bp CACCAGCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: HQLLVVLFGAQGCLH*LGRGRVDGRAVLSA
Trigger: GGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518255.5
ENST00000647411.1
CDS CAA 90 bp GGGTACCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: GYLLVVLFGAQGCLH*LGRGRVDGRAVLSA
Trigger: GGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS CAA 90 bp CCCTACCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: PYLLVVLFGAQGCLH*LGRGRVDGRAVLSA
Trigger: GGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523637.2
ENST00000643317.1
CDS CCA 72 bp AGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTTGCTTaGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAG +
Preference number: 6 (lower is better)
Translates to: SSLWSSGLPPFA*QRSGRWPSGTE
Trigger: CTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
CDS CAA 90 bp AAGAACCTTTTGGTAGTTCTCTTTGGAGCTCAGGGCTGCCTCCATTaGCTTGGCAGAGGTCGGGTAGATGGCCGAGCGGTACTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: KNLLVVLFGAQGCLH*LGRGRVDGRAVLSA
Trigger: GGCACTCAGTACCGCTCGGCCATCTACCCGACCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000528246.5
ENST00000643047.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
CDS CCA 72 bp GGAGCCCAGCAATCCCTACCTTTTGGTAGTTCTCTTTaGAGCTCAGGGCTGCCTCCATTTGCTTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GAQQSLPFGSSL*SSGLPPFAWQR
Trigger: CCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTAGGGATTGCTGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523637.2
ENST00000643317.1
CDS TCA 72 bp TTCCCTCTGGGAAAGGTTCGACTGTTCTGTTGCCATTaGCATGATGTTTGGCCGCTACAGGGGTCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: FPLGKVRLFCCH*HDVWPLQGSVP
Trigger: AGGAACAGACCCCTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317173.9
ENST00000441698.6
ENST00000518255.5
ENST00000643332.1
ENST00000645318.2
ENST00000647411.1
CDS CCA 72 bp ACCTTGAGCAGTTCCTCAAAACTCATGTGTTCTGGCTaGTACACCACTCGGACGACTTCTGCATGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: TLSSSSKLMCSG*YTTRTTSAWPV
Trigger: AACTGGCCATGCAGAAGTCGTCCGAGTGGTGTACCAGCCAGAACACATGAGTTTTGAGGAACTGCTCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000441698.6
ENST00000518255.5
ENST00000521686.1
ENST00000522907.5
ENST00000523637.2
ENST00000528246.5
ENST00000642546.1
ENST00000643047.1
ENST00000643317.1
ENST00000643332.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
ENST00000647412.1
CDS CCA 72 bp AGTGAACATGCTTGGGTACCTTTTGGTAGTTCTCTTTaGAGCTCAGGGCTGCCTCCATTTGCTTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SEHAWVPFGSSL*SSGLPPFAWQR
Trigger: CCTCTGCCAAGCAAATGGAGGCAGCCCTGAGCTCCAAAGAGAACTACCAAAAGGTACCCAAGCATGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521686.1
ENST00000642546.1
CDS TCA 72 bp TTCCCTCTGGGAAAGGTTCGACTGTTCTGTTGCCATTaGCATGATGTTTGGGTTCTGAACACATTCCGAAGG +
Preference number: 6 (lower is better)
Translates to: FPLGKVRLFCCH*HDVWVLNTFRR
Trigger: CCTTCGGAATGTGTTCAGAACCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382490.9
ENST00000523637.2
ENST00000643047.1
ENST00000643317.1
CDS CCA 72 bp ACATCCCATTCCAAATACAGCCATCTGTGTTCCCTCTaGGAAAGGTTCGACTGTTCTGTTGCCATTGACATG +
Preference number: 6 (lower is better)
Translates to: TSHSKYSHLCSL*ERFDCSVAIDM
Trigger: CATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000317173.9
ENST00000382490.9
ENST00000518255.5
ENST00000521209.6
ENST00000522907.5
ENST00000523637.2
ENST00000528246.5
ENST00000643047.1
ENST00000643317.1
ENST00000645254.1
ENST00000645318.2
ENST00000647411.1
ENST00000647412.1
ENST00000647542.1
CDS TCA 72 bp CTATATGAGCAAATGCACTCCAGATACAGTTGGCTGTaGTGCGTTAGCTCCCAGCTCCACATGGTTAAGAAT +
Preference number: 6 (lower is better)
Translates to: LYEQMHSRYSWL*CVSSQLHMVKN
Trigger: ATTCTTAACCATGTGGAGCTGGGAGCTAACGCATCACAGCCAACTGTATCTGGAGTGCATTTGCTCATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517594.1
ENST00000642775.1
CDS CCA 72 bp CTTCAAGCGAAGTCTGGTGTCTTCAGCTTGCCTTTCTaGTCTTCAGTGTTGTCACTAATTGGTTCTGAACAC +
Preference number: 6 (lower is better)
Translates to: LQAKSGVFSLPF*SSVLSLIGSEH
Trigger: GTGTTCAGAACCAATTAGTGACAACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS TCA 72 bp TGTCAGTTTCCTTTAAAGCTTAAAAACGACACGGTGTaGACACACAGAGGACGGCCCACAAAAGGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: CQFPLKLKNDTV*THRGRPTKGCF
Trigger: AAAACAGCCTTTTGTGGGCCGTCCTCTGTGTGTTCACACCGTGTCGTTTTTAAGCTTTAAAGGAAACTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517594.1
ENST00000642775.1
CDS TCA 72 bp TTCCCTCTGGGAAAGGTTCGACTGTTCTGTTGCCATTaGCATGATGTTTGGCTTTATCAAATGCTGCATTCC +
Preference number: 6 (lower is better)
Translates to: FPLGKVRLFCCH*HDVWLYQMLHS
Trigger: GGAATGCAGCATTTGATAAAGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS TCA 72 bp TTCCCTCTGGGAAAGGTTCGACTGTTCTGTTGCCATTaGCATGATGTTTGGATTTCTTGTTTGCCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: FPLGKVRLFCCH*HDVWISCLPFK
Trigger: CTTGAAGGGCAAACAAGAAATCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS CCA 72 bp ATGTTTGGATTTCTTGTTTGCCCTTCAAGCGAAGTCTaGTGTCTTCAGCTTGCCTTTCTGGTCTTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: MFGFLVCPSSEV*CLQLAFLVFSV
Trigger: AACACTGAAGACCAGAAAGGCAAGCTGAAGACACCAGACTTCGCTTGAAGGGCAAACAAGAAATCCAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522907.5
ENST00000528246.5
ENST00000645254.1
ENST00000647412.1
CDS TCA 72 bp TCTGGGAAAGGTTCGACTGTTCTGTTGCCATTGACATaGTGTTTGGCTTTATCAAATGCTGCATTCCCTTAT +
Preference number: 6 (lower is better)
Translates to: SGKGSTVLLPLT*CLALSNAAFPY
Trigger: ATAAGGGAATGCAGCATTTGATAAAGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCTTTCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521209.6
ENST00000647542.1
CDS TCA 72 bp ACACGTATTAGACACAATGGCTCCACTCCTAGAGGCTaGCAGAAATTTCTAAGAGATGTGCAAATAAAACAC +
Preference number: 6 (lower is better)
Translates to: TRIRHNGSTPRG*QKFLRDVQIKH
Trigger: GTGTTTTATTTGCACATCTCTTAGAAATTTCTGTCAGCCTCTAGGAGTGGAGCCATTGTGTCTAATACGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523637.2
ENST00000643317.1