RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MSR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000038945

Ensembl transcript IDs: ENST00000262101.10, ENST00000350896.3, ENST00000355282.6, ENST00000381998.8, ENST00000445506.6, ENST00000517522.1, ENST00000518026.5, ENST00000518343.5, ENST00000518960.5, ENST00000519060.6, ENST00000520846.1, ENST00000521876.5, ENST00000522130.1, ENST00000522672.5

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATaGGAGGTGTCCAGGCTGGGGGTGATAGGGGAGAGAGGTGATGGT +
Preference number: 1 (lower is better)
Translates to: GRELRTGWSSPPVRA*EVSRLGVIGERGDG
Trigger: ACCATCACCTCTCTCCCCTATCACCCCCAGCCTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR GCA 90 bp CCTTCCGGCATATCCTGGGAGTCCTCGACTTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGG +
Preference number: 1 (lower is better)
Translates to: PSGISWESSTSRKAN*SPITFKTRRTYWTW
Trigger: CCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR CCA 90 bp ACAACACGGGAACCAAAGTCATTTGGAGGAGTCACAAAAGGATCTTaGAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTT +
Preference number: 1 (lower is better)
Translates to: TTREPKSFGGVTKGS*KSVVQMTCPEVKGL
Trigger: AAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTCCAAGATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCCGTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR CCA 90 bp GAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTaGAGGAGTCACAAAAGGATCTTGGAAGTCAGTTGTGCAGATGAC +
Preference number: 1 (lower is better)
Translates to: EGHVEVRYNTGTKVI*RSHKRILEVSCADD
Trigger: GTCATCTGCACAACTGACTTCCAAGATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR CCA 90 bp ATTACTGGGTTTCAGGGTAGCTTTTCACACTCTACACTATGGCCCTaGGGATGGGTTGACTACCAACAAAAGGTTGCTAAACTACTTTTT +
Preference number: 1 (lower is better)
Translates to: ITGFQGSFSHSTLWP*GWVDYQQKVAKLLF
Trigger: AAAAAGTAGTTTAGCAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAAAGCTACCCTGAAACCCAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR GCA 90 bp AAACTTCAGAATTCTGTTATTTTCAGGGCTGAGGTTGAATTCATTTaGGCTTTAATATCAACTGCTGGTCTTTCTGCAGGCAGTCACTTT +
Preference number: 1 (lower is better)
Translates to: KLQNSVIFRAEVEFI*ALISTAGLSAGSHF
Trigger: AAAGTGACTGCCTGCAGAAAGACCAGCAGTTGATATTAAAGCGCAAATGAATTCAACCTCAGCCCTGAAAATAACAGAATTCTGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR CCA 90 bp AAACTAAACTTCCTGTTAAGTGGCATTTTTGATCCACCAATTATCTaGACAAATATACTGATGGTCAGTTTTCTCATATGTCCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: KLNFLLSGIFDPPII*TNILMVSFLICPAF
Trigger: GAAAGCAGGACATATGAGAAAACTGACCATCAGTATATTTGTCCAGATAATTGGTGGATCAAAAATGCCACTTAACAGGAAGTTTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CAGAGGATGTCCCGCCCAACCCACCTGATCTTAAGAGGGCCCTGCCCTAATATGCCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QRMSRPTHLILRGPCPNMPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...CATATTAGGGCAGGGCCCTCTTAAGATCAGGTGGGTTGGGCGGGACATCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR TCA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGCCTCCAGTCCGTGCATaGGAGGTGTCCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLPPVRA*EVSRLG
Trigger: CCCCAGCCTGGACACCTCTCATGCACGGACTGGAGG...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CCA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGGGAGAGAAGGCCATGTaGAAGTCAGGTACAACACGG +
Preference number: 2 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMGEKAM*KSGTTR
Trigger: CCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCC...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CCA 90 bp TCCCCTTTCTGGCCTTTTGGTCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGCAGAGAACTGAGGACTaGTTGGAGCAGCCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: SPFWPFGPEFPGLPAYPGQRTED*LEQPSS
Trigger: ACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTG...CCCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR TCA 90 bp CAGAGGATGTCCCGCCCAACCCACCTGATCTTAAGAGGGCCCTGCCCTAATATGGATAGGGGAGAGAGGTaGTGGTGGAGTAATTGGAGT +
Preference number: 2 (lower is better)
Translates to: QRMSRPTHLILRGPCPNMDRGER*WWSNWS
Trigger: ACTCCAATTACTCCACCATCACCTCTCTCCCCTATC...CATATTAGGGCAGGGCCCTCTTAAGATCAGGTGGGTTGGGCGGGACATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CCA 90 bp GAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATCTTAAGAGGGCCCTGGACCACTTTCTCCAGTaGGACCTCGATCTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: EMVAEDVPPNPPDLKRALDHFLQ*DLDLLF
Trigger: AAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTC...CAGGGCCCTCTTAAGATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CCA 90 bp TCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGAGTCCTCGACTTCCAGGAAAGGAGAGAAGGCCATGTaGAAGTCAGGTACAACACGG +
Preference number: 2 (lower is better)
Translates to: SRISWPSGISWESSTSRKGEKAM*KSGTTR
Trigger: CCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCC...TTTCCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGGCCAGGAAATTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CCA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGGTCACAAAAGGATCTTaGAAGTCAGTTGTGCAGATG +
Preference number: 2 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQVTKGS*KSVVQM
Trigger: CATCTGCACAACTGACTTCCAAGATCCTTTTGTGAC...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CCA 90 bp CGCCCAACCCACCTGATCTTAAGAGGGCCCTGCCCTAATATGATCAGTGAGTTGAGGACCTATTGGACCTaGAAATCCTCGTGGACCACT +
Preference number: 2 (lower is better)
Translates to: RPTHLILRGPCPNMISELRTYWT*KSSWTT
Trigger: AGTGGTCCACGAGGATTTCCAGGTCCAATAGGTCCT...CAACTCACTGATCATATTAGGGCAGGGCCCTCTTAAGATCAGGTGGGTTGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR TCA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGATATTTCTCAAGGTCTaGGAATGTTCCCAATCTTTC +
Preference number: 2 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMIFLKV*ECSQSF
Trigger: GAAAGATTGGGAACATTCTCAGACCTTGAGAAATAT...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGCCCTGGGGATGGGTTaGCTACCAACAAAAGGTTGC +
Preference number: 2 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVALGMG*LPTKGC
Trigger: GCAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp GAAATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 2 (lower is better)
Translates to: EILVDHFLQWDLDLLFHPGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...CGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCTATGGCCCTGGGGATaGGTTGACTACCAACAAAAG +
Preference number: 2 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFLWPWG*VDYQQK
Trigger: CTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR CAA 90 bp TACAACACGGGAACCAAAGTCATTTGGAGGAGTCACAAAAGGATCTaGGAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCT +
Preference number: 2 (lower is better)
Translates to: YNTGTKVIWRSHKRI*EVSCADDLSRGEGP
Trigger: AGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTCCAAGATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCCGTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR TCA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCTCTTCCAAGTTAGGGTaGGAACACAGCAGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSSSKLG*EHSSSP
Trigger: AGGAGAACTGCTGTGTTCTCACCCTAACTTGGAAGA...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR TCA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAAAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 2 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR CAA 90 bp TGGAGGAGTCACAAAAGGATCTTGGAAGTCAGTTGTGCAGATGACTaGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTAGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: WRSHKRILEVSCADD*SRGEGPFNEMVAED
Trigger: ATCCTCTGCTACCATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTCCAAGATCCTTTTGTGACTCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR TCA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCAGGAATCGCTTTGCTTaGCTGAAACATCACTCTTCC +
Preference number: 2 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSRNRFA*LKHHSS
Trigger: GGAAGAGTGATGTTTCAGTCAAGCAAAGCGATTCCT...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAACTGCTGGTCTTTCTaGAGGCAGTCACTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVNCWSF*RQSLSG
Trigger: CCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCTCTTCCTTCTGCACTaGAGATGTTTGCATTGTTTG +
Preference number: 2 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFLFLLH*RCLHCL
Trigger: CAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTCACACTCTACACTATaGCCCTGGGGATGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETSHSTL*PWGWVD
Trigger: GTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp TTATACAAGAGTGGGAATAAAAATGCTGAGATACACAGAGGCATACCATCTAGAGAACTGAGGACTGGTTaGAGCAGCCCTCCAGTCCGT +
Preference number: 2 (lower is better)
Translates to: LYKSGNKNAEIHRGIPSRELRTG*SSPPVR
Trigger: ACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTC...TCTAGATGGTATGCCTCTGTGTATCTCAGCATTTTTATTCCCACTCTTGTATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGTTAAGTGGCATTTTTaGTCCACCAATTATCTGGAC +
Preference number: 2 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLVKWHF*STNYLD
Trigger: GTCCAGATAATTGGTGGATCAAAAATGCCACTTAAC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTCTACACTATGGCCCTaGGGATGGGTTGACTACCAA +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETSTLWP*GWVDYQ
Trigger: TTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCACAATATGTGTGGATTaGAGATTTTGCAATCTAGGC +
Preference number: 2 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFTICVD*RFCNLG
Trigger: GCCTAGATTGCAAAATCTCCAATCCACACATATTGT...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGTTAAGTGGCATTTTTaGTCCACCAATTATCTGGAC +
Preference number: 2 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVVKWHF*STNYLD
Trigger: GTCCAGATAATTGGTGGATCAAAAATGCCACTTAAC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCAAGACTCCAAACAGTTaGAACCACTCTTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETKTPNS*NHSSFC
Trigger: GCAGAAGGAAGAGTGGTTTCAACTGTTTGGAGTCTT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCAGCCAATTACTGGTATaGATTTCTATTACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETSQLLV*ISITLG
Trigger: GCCAAGGGTAATAGAAATGCATACCAGTAATTGGCT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGAGGTTGAATTCATTTaGGCTTTAATATCAACTGCT +
Preference number: 2 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVEVEFI*ALISTA
Trigger: AGCAGTTGATATTAAAGCGCAAATGAATTCAACCTC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTTTAATATCAACTGCTaGTCTTTCTGCAGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETFNINC*SFCRQS
Trigger: TGACTGCCTGCAGAAAGACCAGCAGTTGATATTAAA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTGTGAGTCTACCACTTaGTTATTATGTGTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETCESTT*LLCVVR
Trigger: TCTCACCACACATAATAACCAAGTGGTAGACTCACA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGAATTATTAACTAGCTaGAATTACAGCCAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETELLTS*NYSQGL
Trigger: CAAACCCTGGCTGTAATTTCAGCTAGTTAATAATTC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR TCA 90 bp TTATACAAGAGTGGGAATAAAAATGCTGAGATACACAGAGGCATACCATCTAGAATCGCTTTGCTTGACTaGAACATCACTCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: LYKSGNKNAEIHRGIPSRIALLD*NITLPS
Trigger: ACTTGGAAGAGTGATGTTTCAGTCAAGCAAAGCGAT...TCTAGATGGTATGCCTCTGTGTATCTCAGCATTTTTATTCCCACTCTTGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGTGGATTGGAGATTTTaGAATCTAGGCACAAAAGAT +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETVDWRF*NLGTKD
Trigger: ATCTTTTGTGCCTAGATTGCAAAATCTCCAATCCAC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCATTGGAGCCAATTACTaGTATGCATTTCTATTACCC +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETIGANY*YAFLLP
Trigger: GGGTAATAGAAATGCATACCAGTAATTGGCTCCAAT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCACAATATGTGTGGATTaGAGATTTTGCAATCTAGGC +
Preference number: 2 (lower is better)
Translates to: LISDIPNRLIMQMILSETTICVD*RFCNLG
Trigger: GCCTAGATTGCAAAATCTCCAATCCACACATATTGT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACAGGAACCAAAGTCATTTaGAGGAGTCACAAAAGGATC +
Preference number: 2 (lower is better)
Translates to: LFICLHLLGTISSVKPETGTKVI*RSHKRI
Trigger: GATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCC...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR GCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAGCCAATTACTGGTATaGATTTCTATTACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVISQLLV*ISITLG
Trigger: GCCAAGGGTAATAGAAATGCATACCAGTAATTGGCT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGAACATATTATGAATTaGAGCCAATTACTGGTATGC +
Preference number: 2 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIEHIMN*SQLLVC
Trigger: GCATACCAGTAATTGGCTCCAATTCATAATATGTTC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR TCA 72 bp CTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATaGGAGGTGTCCAGGCTGGGGGTGATAGGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LRTGWSSPPVRA*EVSRLGVIGER
Trigger: TCTCTCCCCTATCACCCCCAGCCTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR GCA 72 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTaGATGAGAGGTGTCCAGGCTGGGGGTGATAGGGGA +
Preference number: 3 (lower is better)
Translates to: RTEDWLEQPSSP*MRGVQAGGDRG
Trigger: TCCCCTATCACCCCCAGCCTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CAA 90 bp GAAATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGAGTTGTGCAGATGACTaGTCCAGAGGTGAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: EILVDHFLQWDLDLLFHPSCADD*SRGEGP
Trigger: AGGCCCTTCACCTCTGGACAAGTCATCTGCACAACT...CGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CAA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATGGGAACCAAAGTCATTaGGAGGAGTCACAAAAGGAT +
Preference number: 3 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDGNQSH*EESQKD
Trigger: ATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCC...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGGCCCTGGGGATGGGTaGACTACCAACAAAAGGTTG +
Preference number: 3 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVGPGDG*TTNKRL
Trigger: CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CAA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAAAGTCACAAAAGGATCTaGGAAGTCAGTTGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKSHKRI*EVSCAD
Trigger: ATCTGCACAACTGACTTCCAAGATCCTTTTGTGACT...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CAA 90 bp CGCCCAACCCACCTGATCTTAAGAGGGCCCTGCCCTAATATGATCAGTGAGTTGCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 3 (lower is better)
Translates to: RPTHLILRGPCPNMISELLFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...CAACTCACTGATCATATTAGGGCAGGGCCCTCTTAAGATCAGGTGGGTTGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
3UTR-3UTR CAA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCGGGAACCAAAGTCATTaGGAGGAGTCACAAAAGGAT +
Preference number: 3 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSGNQSH*EESQKD
Trigger: ATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCC...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CAA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACAAGAACTGAGGACTGGTaGGAGCAGCCCTCCAGTCCG +
Preference number: 3 (lower is better)
Translates to: LFICLHLLGTISSVKPETRTEDW*EQPSSP
Trigger: CGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR-3UTR CAA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCAGTCACAAAAGGATCTaGGAAGTCAGTTGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSSHKRI*EVSCAD
Trigger: ATCTGCACAACTGACTTCCAAGATCCTTTTGTGACT...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR CCA 72 bp TTTCAGGGTAGCTTTTCACACTCTACACTATGGCCCTaGGGATGGGTTGACTACCAACAAAAGGTTGCTAAA +
Preference number: 3 (lower is better)
Translates to: FQGSFSHSTLWP*GWVDYQQKVAK
Trigger: TTTAGCAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAAAGCTACCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR CCA 72 bp GTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTaGAGGAGTCACAAAAGGATCTTGGAAGTCAGTTGT +
Preference number: 3 (lower is better)
Translates to: VEVRYNTGTKVI*RSHKRILEVSC
Trigger: ACAACTGACTTCCAAGATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
3UTR-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTGTGGATTGGAGATTTaGCAATCTAGGCACAAAAGA +
Preference number: 3 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLCGLEI*QSRHKR
Trigger: TCTTTTGTGCCTAGATTGCAAAATCTCCAATCCACA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGAACAATATGTGTGGATaGGAGATTTTGCAATCTAGG +
Preference number: 3 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLNNMCG*EILQSR
Trigger: CCTAGATTGCAAAATCTCCAATCCACACATATTGTT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CAA 90 bp TTATACAAGAGTGGGAATAAAAATGCTGAGATACACAGAGGCATACCATCTAGAAGTTGTGCAGATGACTaGTCCAGAGGTGAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: LYKSGNKNAEIHRGIPSRSCADD*SRGEGP
Trigger: AGGCCCTTCACCTCTGGACAAGTCATCTGCACAACT...TCTAGATGGTATGCCTCTGTGTATCTCAGCATTTTTATTCCCACTCTTGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR GCA 72 bp GCTGTTTACAGTAATTCCAATTCCAAGGTAAGGTTTTaGCTTTTTAAGTTGGACGGCTGTGAGTCTACCACT +
Preference number: 3 (lower is better)
Translates to: AVYSNSNSKVRF*LFKLDGCESTT
Trigger: AGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCAAAACCTTACCTTGGAATTGGAATTACTGTAAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGCATTTCTATTACCCTaGGCCTTTGTAATCTGGAAG +
Preference number: 3 (lower is better)
Translates to: LISDIPNRLIMQMILSETAFLLP*AFVIWK
Trigger: CTTCCAGATTACAAAGGCCAAGGGTAATAGAAATGC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCAAAGACTCCAAACAGTaGAAACCACTCTTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: LISDIPNRLIMQMILSETKDSKQ*KPLFLL
Trigger: CAGAAGGAAGAGTGGTTTCAACTGTTTGGAGTCTTT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR CCA 72 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTaGTTATTATGTGTGGTGAGACTTCAGAATATGAAA +
Preference number: 3 (lower is better)
Translates to: CLFKLDGCESTT*LLCVVRLQNMK
Trigger: TTTCATATTCTGAAGTCTCACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR GCA 72 bp GGTGAACATATTATGAATTGGAGCCAATTACTGGTATaGATTTCTATTACCCTTGGCCTTTGTAATCTGGAA +
Preference number: 3 (lower is better)
Translates to: GEHIMNWSQLLV*ISITLGLCNLE
Trigger: TTCCAGATTACAAAGGCCAAGGGTAATAGAAATGCATACCAGTAATTGGCTCCAATTCATAATATGTTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
3UTR TCA 72 bp GCATTTTTGATCCACCAATTATCTGGACAAATATACTaGTGGTCAGTTTTCTCATATGTCCTGCTTTCAATT +
Preference number: 3 (lower is better)
Translates to: AFLIHQLSGQIY*WSVFSYVLLSI
Trigger: AATTGAAAGCAGGACATATGAGAAAACTGACCATCAGTATATTTGTCCAGATAATTGGTGGATCAAAAATGC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGCCTCCAGTCCGTGCATaGGAGGTGTCCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQPPVRA*EVSRLG
Trigger: CCCCAGCCTGGACACCTCTCATGCACGGACTGGAGG...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR GCA 90 bp GAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATCTTAAGAGGGCCCTGCAGCCCTCCAGTCCGTaGATGAGAGGTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EMVAEDVPPNPPDLKRALQPSSP*MRGVQA
Trigger: AGCCTGGACACCTCTCATGCACGGACTGGAGGGCTG...CAGGGCCCTCTTAAGATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR GCA 90 bp TTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCCAGCCCTCCAGTCCGTaGATGAGAGGTGTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSRGEGPFNEMVAEDVPPQPSSP*MRGVQA
Trigger: AGCCTGGACACCTCTCATGCACGGACTGGAGGGCTG...GGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTCACCTCTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGTGGTCCAGAATTTCCTaGCCTTCCGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQWSRIS*PSGISW
Trigger: CCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCA...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp GAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATCTTAAGAGGGCCCTGGGAGAGAAGGCCATGTaGAAGTCAGGTACAACACGG +
Preference number: 4 (lower is better)
Translates to: EMVAEDVPPNPPDLKRALGEKAM*KSGTTR
Trigger: CCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCC...CAGGGCCCTCTTAAGATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGGGCCCTGCCCTAATATaGTCAGTGAGTTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQGPALI*SVSCTG
Trigger: ACCAGTACAACTCACTGATCATATTAGGGCAGGGCC...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGGATAGGGGAGAGAGGTaGTGGTGGAGTAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQDRGER*WWSNWS
Trigger: ACTCCAATTACTCCACCATCACCTCTCTCCCCTATC...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp GAAATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGCCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EILVDHFLQWDLDLLFHPPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...CGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATGAACTGAGGACTGGTTaGAGCAGCCCTCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDELRTG*SSPPVR
Trigger: ACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTC...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTCCACCCTCCCCTCGTaGGGGCCGCTCCCACCGACC +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETSTLPS*GPLPPT
Trigger: GGTCGGTGGGAGCGGCCCTCACGAGGGGAGGGTGGA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR GCA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMSRKAN*SPITFK
Trigger: CTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGA...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp AATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGGGTGGTCCAGAATTTCCTaGCCTTCCGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: NPRGPLSPVGPRSPFSPGWSRIS*PSGISW
Trigger: CCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCA...CCCGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CCA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAACAGAGAACTGAGGACTaGTTGGAGCAGCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKQRTED*LEQPSS
Trigger: ACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTG...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp TCCCCTTTCTGGCCTTTTGGTCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGGGCCCTGCCCTAATATaGTCAGTGAGTTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: SPFWPFGPEFPGLPAYPGGPALI*SVSCTG
Trigger: ACCAGTACAACTCACTGATCATATTAGGGCAGGGCC...CCCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR GCA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGGTAAAGGGCAATCAGTaGAGCTTTGAAGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMVKGNQ*SFEGLQ
Trigger: CTGAAGTCCTTCAAAGCTGCACTGATTGCCCTTTAC...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCCCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCGAACTGAGGACTGGTTaGAGCAGCCCTCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSELRTG*SSPPVR
Trigger: ACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTC...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATGATAGGGGAGAGAGGTaGTGGTGGAGTAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDDRGER*WWSNWS
Trigger: ACTCCAATTACTCCACCATCACCTCTCTCCCCTATC...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp TCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGAGTCCTCGACTTCCAGGAAAAGGACCTATTGGACCTaGAAATCCTCGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: SRISWPSGISWESSTSRKRTYWT*KSSWTT
Trigger: AGTGGTCCACGAGGATTTCCAGGTCCAATAGGTCCT...TTTCCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGGCCAGGAAATTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGTACCTTGTCCAAAGTaGGCTGCCTTGTGCACGGCT +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLVPCPK*AALCTA
Trigger: AGCCGTGCACAAGGCAGCTCACTTTGGACAAGGTAC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGCCCTGGGGATGGGTTaGCTACCAACAAAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLALGMG*LPTKGC
Trigger: GCAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCTCTTCCAAGTTAGGGTaGGAACACAGCAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSRGEGPFNEMVAEDVPPSSKLG*EHSSSP
Trigger: AGGAGAACTGCTGTGTTCTCACCCTAACTTGGAAGA...GGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTCACCTCTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATGACCACTTTCTCCAGTaGGACCTCGATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDDHFLQ*DLDLLF
Trigger: AAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTC...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCGGAGAGAAGGCCATGTaGAAGTCAGGTACAACACGG +
Preference number: 4 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSGEKAM*KSGTTR
Trigger: CCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCC...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp TCCCCTTTCTGGCCTTTTGGTCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 4 (lower is better)
Translates to: SPFWPFGPEFPGLPAYPGGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...CCCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CCA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCAGGACCTATTGGACCTaGAAATCCTCGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSRTYWT*KSSWTT
Trigger: AGTGGTCCACGAGGATTTCCAGGTCCAATAGGTCCT...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCTGGTCCAGAATTTCCTaGCCTTCCGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFWSRIS*PSGISW
Trigger: CCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCA...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCACGGCTTGAACACCTaGGTATCCCAAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFHGLNT*VSQAPT
Trigger: TGTAGGAGCTTGGGATACCCAGGTGTTCAAGCCGTG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR CCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTCACACTCTACACTATaGCCCTGGGGATGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLSHSTL*PWGWVD
Trigger: GTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAAAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKKQSCH*ASIKFH
Trigger: GTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTT...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATATCGCTTTGCTTGACTaGAACATCACTCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDIALLD*NITLPS
Trigger: ACTTGGAAGAGTGATGTTTCAGTCAAGCAAAGCGAT...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR TCA 90 bp TCCAGAATTTCCTGGCCTTCCGGCATATCCTGGGAGTCCTCGACTTCCAGGAAAGCTCCTCTAATTTACTaGTTTCTCGGAGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SRISWPSGISWESSTSRKAPLIY*FLGGSK
Trigger: TTTGCTTCCTCCGAGAAATCAGTAAATTAGAGGAGC...TTTCCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGGCCAGGAAATTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAAGAGTTGTACTGGTCCTaGCACATATATAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKELYWS*HIYKGG
Trigger: TCCTCCTTTATATATGTGTCAGGACCAGTACAACTC...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR GCA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGGAGAGGGATGAGAACTaGAAACACGAGGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLERDEN*KHEEVK
Trigger: CTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTC...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGATGTCTAAAATATGCTaGATTCTCTTCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMMSKIC*ILFSML
Trigger: CAACATGGAGAAGAGAATCCAGCATATTTTAGACAT...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGGCATTCCCATGTCCCTaGACTGAGGAAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLAFPCP*TEENKV
Trigger: TACCTTGTTTTCCTCAGTCCAGGGACATGGGAATGC...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATGGAACCAAAGTCATTTaGAGGAGTCACAAAAGGATC +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDGTKVI*RSHKRI
Trigger: GATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCC...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CCA 90 bp AAGCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAGGAACCAAAGTCATTTaGAGGAGTCACAAAAGGATC +
Preference number: 4 (lower is better)
Translates to: KPIAPRSPLRPGGPIGPGGTKVI*RSHKRI
Trigger: GATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCC...TCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGTCCCACTTCAGGAGTTaGGCTGCCACTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMSHFRS*AATIPM
Trigger: CATTGGAATAGTGGCAGCTCAACTCCTGAAGTGGGA...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR TCA 90 bp AAGCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 4 (lower is better)
Translates to: KPIAPRSPLRPGGPIGPGSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...TCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR TCA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCAGGAATCGCTTTGCTTaGCTGAAACATCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSRNRFA*LKHHSS
Trigger: GGAAGAGTGATGTTTCAGTCAAGCAAAGCGATTCCT...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR GCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGAGAGGGATGAGAACTaGAAACACGAGGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLERDEN*KHEEVK
Trigger: CTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp GAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCAACCCACCTGATCTGAAATTTTGGAAATaGTCTGTGTCCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EGPFNEMVAEDVPPNPPDLKFWK*SVSMRL
Trigger: CAACCTCATGGACACAGAGCATTTCCAAAATTTCAG...ATCAGGTGGGTTGGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR GCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLSRKAN*SPITFK
Trigger: CTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTGGTCCAGAATTTCCTaGCCTTCCGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVWSRIS*PSGISW
Trigger: CCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGCAAATTGTACCCCACTaGCCGCTGTGGAGTATCTCC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVQIVPH*PLWSIS
Trigger: GGAGATACTCCACAGCGGCCAGTGGGGTACAATTTG...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTCACACTCTACACTATaGCCCTGGGGATGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSHSTL*PWGWVD
Trigger: GTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTCCCACTTCAGGAGTTaGGCTGCCACTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSHFRS*AATIPM
Trigger: CATTGGAATAGTGGCAGCTCAACTCCTGAAGTGGGA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTGCCTTGTGCACGGCTTaGACACCTGGGTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVALCTA*TPGYPK
Trigger: CTTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGC...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAGCATCTTCAGAATGTaGACAGGCTCTTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSIFRM*TGSCPP
Trigger: TGGGGGACAAGAGCCTGTTCACATTCTGAAGATGCT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGAAGACTCCAAACAGTTaGAACCACTCTTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLKTPNS*NHSSFC
Trigger: GCAGAAGGAAGAGTGGTTTCAACTGTTTGGAGTCTT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCGTAAAGGGCAATCAGTaGAGCTTTGAAGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFVKGNQ*SFEGLQ
Trigger: CTGAAGTCCTTCAAAGCTGCACTGATTGCCCTTTAC...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGGAGATTTCATCTATTaGATTCCCATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLGDFIY*IPMSLD
Trigger: GTCCAGGGACATGGGAATGCAATAGATGAAATCTCC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCGCTTTAATATCAACTaGTGGTCTTTCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFRFNIN*WSFCRQ
Trigger: CTGCCTGCAGAAAGACCAGCAGTTGATATTAAAGCG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTCTACACTATGGCCCTaGGGATGGGTTGACTACCAA +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSTLWP*GWVDYQ
Trigger: TTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGGATCAGTTGTCATGCTaGAATTTTGGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLDQLSC*NFGNAL
Trigger: CAGAGCATTTCCAAAATTTCAGCATGACAACTGATC...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCTCTTCCTTCTGCACTaGAGATGTTTGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLLFLLH*RCLHCL
Trigger: CAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGGAGATTTCATCTATTaGATTCCCATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMGDFIY*IPMSLD
Trigger: GTCCAGGGACATGGGAATGCAATAGATGAAATCTCC...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSRKAN*SPITFK
Trigger: CTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGCATTCCCATGTCCCTaGACTGAGGAAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVAFPCP*TEENKV
Trigger: TACCTTGTTTTCCTCAGTCCAGGGACATGGGAATGC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGACCACTTTCTCCAGTaGGACCTCGATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVDHFLQ*DLDLLF
Trigger: AAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp ACAAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGACCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TNLSTYNAEIFNTIGGRGPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...TCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
3UTR CAA 72 bp TGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTaGGAGGAGTCACAAAAGGATCTTGGAAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: CGSQVQHGNQSH*EESQKDLGSQL
Trigger: CAACTGACTTCCAAGATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGATATTTCTCAAGGTCTaGGAATGTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLIFLKV*ECSQSF
Trigger: GAAAGATTGGGAACATTCTCAGACCTTGAGAAATAT...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCAGCATCTTCAGAATGTaGACAGGCTCTTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETSIFRM*TGSCPP
Trigger: TGGGGGACAAGAGCCTGTTCACATTCTGAAGATGCT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCGTTAAGTGGCATTTTTaGTCCACCAATTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFVKWHF*STNYLD
Trigger: GTCCAGATAATTGGTGGATCAAAAATGCCACTTAAC...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCATGAAGAAAGGAAATaGCACATTCCTGCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLHEERK*HIPALK
Trigger: TTTCAACGCAGGAATGTGTCATTTCCTTTCTTCATG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350896.3
CDS-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGGAGATTTCATCTATTaGATTCCCATGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVGDFIY*IPMSLD
Trigger: GTCCAGGGACATGGGAATGCAATAGATGAAATCTCC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCAGCCAATTACTGGTATaGATTTCTATTACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFSQLLV*ISITLG
Trigger: GCCAAGGGTAATAGAAATGCATACCAGTAATTGGCT...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCAACCACTCTTCCTTCTaGACTGAAGATGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFNHSSF*TEDVCI
Trigger: AATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTT...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGATGGGTTGGATAAATTaGCCAAGCTCGACTACACTT +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMMGWIN*PSSTTL
Trigger: AAGTGTAGTCGAGCTTGGGCAATTTATCCAACCCAT...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCGTCATGCTGAAATTTTaGAAATGCTCTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFVMLKF*KCSVSM
Trigger: CATGGACACAGAGCATTTCCAAAATTTCAGCATGAC...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTCCTTCCGGCATATCCTaGGAGTCCTCGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIPSGIS*ESSTSR
Trigger: CCTGGAAGTCGAGGACTCCCAGGATATGCCGGAAGG...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp AAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCTGGTCCAGAATTTCCTaGCCTTCCGGCATATCCTGG +
Preference number: 4 (lower is better)
Translates to: KLINIQCRDFQYYRRARSWSRIS*PSGISW
Trigger: CCAGGATATGCCGGAAGGCCAGGAAATTCTGGACCA...GCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCCTATGGCCCTGGGGATaGGTTGACTACCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETLWPWG*VDYQQK
Trigger: CTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAG...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTTTAATATCAACTGCTaGTCTTTCTGCAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLFNINC*SFCRQS
Trigger: TGACTGCCTGCAGAAAGACCAGCAGTTGATATTAAA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTGTGAGTCTACCACTTaGTTATTATGTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLCESTT*LLCVVR
Trigger: TCTCACCACACATAATAACCAAGTGGTAGACTCACA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACACAGAGAACTGAGGACTaGTTGGAGCAGCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LFICLHLLGTISSVKPETQRTED*LEQPSS
Trigger: ACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTG...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
3UTR CAA 72 bp CACAAAAGGATCTTGGAAGTCAGTTGTGCAGATGACTaGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTA +
Preference number: 4 (lower is better)
Translates to: HKRILEVSCADD*SRGEGPFNEMV
Trigger: TACCATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTCCAAGATCCTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTTCCCACTTCAGGAGTTaGGCTGCCACTATTCCAATG +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVSHFRS*AATIPM
Trigger: CATTGGAATAGTGGCAGCTCAACTCCTGAAGTGGGA...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCATATTTCTCAAGGTCTaGGAATGTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSIFLKV*ECSQSF
Trigger: GAAAGATTGGGAACATTCTCAGACCTTGAGAAATAT...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR TCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCATTATAAAGTGCAAGTaGCTCCAGCATCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFIIKCK*LQHLQN
Trigger: ATTCTGAAGATGCTGGAGTCACTTGCACTTTATAAT...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGCCCTGGGGATGGGTTaGCTACCAACAAAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIALGMG*LPTKGC
Trigger: GCAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGAATTATTAACTAGCTaGAATTACAGCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLELLTS*NYSQGL
Trigger: CAAACCCTGGCTGTAATTTCAGCTAGTTAATAATTC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp GAAGTCAGTTGTGCAGATGACTTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGATGGATTTTCTTCTATaGCATCCCTATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EVSCADDLSRGEGPFNEMMDFLL*HPYLWL
Trigger: CAACCAGAGATAGGGATGTCATAGAAGAAAATCCAT...CATCTCATTAAAAGGCCCTTCACCTCTGGACAAGTCATCTGCACAACTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGAGAGGGATGAGAACTaGAAACACGAGGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETERDEN*KHEEVK
Trigger: CTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTTTGTCCAAAGTGAGCTaGCTTGTGCACGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVLSKVS*LVHGLN
Trigger: GTTCAAGCCGTGCACAAGGCAGCTCACTTTGGACAA...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR GCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGTGGATTGGAGATTTTaGAATCTAGGCACAAAAGAT +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLVDWRF*NLGTKD
Trigger: ATCTTTTGTGCCTAGATTGCAAAATCTCCAATCCAC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTAACTGCTGGTCTTTCTaGAGGCAGTCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVNCWSF*RQSLSG
Trigger: CCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGCTCAGACATCCCAAGTaGCTATGGGTTGTTAATAGT +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVLRHPK*LWVVNS
Trigger: ACTATTAACAACCCATAGGCACTTGGGATGTCTGAG...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGCATTCCCATGTCCCTaGACTGAGGAAAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETAFPCP*TEENKV
Trigger: TACCTTGTTTTCCTCAGTCCAGGGACATGGGAATGC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTAGGACCTATTGGACCTaGAAATCCTCGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVRTYWT*KSSWTT
Trigger: AGTGGTCCACGAGGATTTCCAGGTCCAATAGGTCCT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGACAATATGTGTGGATTaGAGATTTTGCAATCTAGGC +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLTICVD*RFCNLG
Trigger: GCCTAGATTGCAAAATCTCCAATCCACACATATTGT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTTTGCCTTTTTAAGTTaGACGGCTGTGAGTCTACCA +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVFAFLS*TAVSLP
Trigger: TGGTAGACTCACAGCCGTCCAACTTAAAAAGGCAAA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCATCCCAAGTGCCTATaGGTTGTTAATAGTACTATT +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLHPKCL*VVNSTI
Trigger: AATAGTACTATTAACAACCCATAGGCACTTGGGATG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTAATGCTCTGTGTCCATaGGGTTGGCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVNALCP*GWLPCL
Trigger: TAGACATGGAAGCCAACCTCATGGACACAGAGCATT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGATCAGTTGTCATGCTaGAATTTTGGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVDQLSC*NFGNAL
Trigger: CAGAGCATTTCCAAAATTTCAGCATGACAACTGATC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGCTGAAATTTTGGAAATaGTCTGTGTCCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVLKFWK*SVSMRL
Trigger: CAACCTCATGGACACAGAGCATTTCCAAAATTTCAG...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAGCCAATTACTGGTATaGATTTCTATTACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVSQLLV*ISITLG
Trigger: GCCAAGGGTAATAGAAATGCATACCAGTAATTGGCT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCCGCTTTAATATCAACTaGTGGTCTTTCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETRFNIN*WSFCRQ
Trigger: CTGCCTGCAGAAAGACCAGCAGTTGATATTAAAGCG...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGAGGTTGAATTCATTTaGGCTTTAATATCAACTGCT +
Preference number: 4 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLEVEFI*ALISTA
Trigger: AGCAGTTGATATTAAAGCGCAAATGAATTCAACCTC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCATGTCTAAAATATGCTaGATTCTCTTCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFMSKIC*ILFSML
Trigger: CAACATGGAGAAGAGAATCCAGCATATTTTAGACAT...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTGACCACTTTCTCCAGTaGGACCTCGATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVDHFLQ*DLDLLF
Trigger: AAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTC...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp AAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCGACCACTTTCTCCAGTaGGACCTCGATCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KLINIQCRDFQYYRRARSDHFLQ*DLDLLF
Trigger: AAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTC...GCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR CCA 90 bp ACAAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAAGGACCTATTGGACCTaGAAATCCTCGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: TNLSTYNAEIFNTIGGRGRTYWT*KSSWTT
Trigger: AGTGGTCCACGAGGATTTCCAGGTCCAATAGGTCCT...TCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR CCA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCGAACATATTATGAATTaGAGCCAATTACTGGTATGC +
Preference number: 4 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFEHIMN*SQLLVC
Trigger: GCATACCAGTAATTGGCTCCAATTCATAATATGTTC...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETKQSCH*ASIKFH
Trigger: GTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTT...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGACTTCAGTTTCTCTTaGAGGGAAGGGCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETDFSFS*REGLFL
Trigger: TAAAAACAGCCCTTCCCTTCAAGAGAAACTGAAGTC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACAAATGCTCTGTGTCCATaGGGTTGGCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: LFICLHLLGTISSVKPETNALCP*GWLPCL
Trigger: TAGACATGGAAGCCAACCTCATGGACACAGAGCATT...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGATATTTCTCAAGGTCTaGGAATGTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVIFLKV*ECSQSF
Trigger: GAAAGATTGGGAACATTCTCAGACCTTGAGAAATAT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCCTCTTCCTTCTGCACTaGAGATGTTTGCATTGTTTG +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETLFLLH*RCLHCL
Trigger: CAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAG...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGAATTATTAACTAGCTaGAATTACAGCCAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVELLTS*NYSQGL
Trigger: CAAACCCTGGCTGTAATTTCAGCTAGTTAATAATTC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp AACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCAGATATTTTTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: NIQCRDFQYYRRARSRYFSRKAN*SPITFK
Trigger: CTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGA...AAAATATCTGCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGCTCTTGTCCCCCATTaGCGAATTTTACATTCTTCA +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETALVPH*RILHSS
Trigger: TGAAGAATGTAAAATTCGGCAATGGGGGACAAGAGC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCCTCAGACATCCCAAGTaGCTATGGGTTGTTAATAGT +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETLRHPK*LWVVNS
Trigger: ACTATTAACAACCCATAGGCACTTGGGATGTCTGAG...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAATGCTCTGTGTCCATaGGGTTGGCTTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVINALCP*GWLPCL
Trigger: TAGACATGGAAGCCAACCTCATGGACACAGAGCATT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp AACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCAGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 4 (lower is better)
Translates to: NLSTYNAEIFNTIGGRGAGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...TGCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR GCA 90 bp TGTTCCCAATCTTTCAGTCTGAGATCATTAGTGATGTTATTCAGTACTTTCACTTCCAGGAAAGCCAATTaGTCCCCGATCACCTTTAAG +
Preference number: 4 (lower is better)
Translates to: CSQSFSLRSLVMLFSTFTSRKAN*SPITFK
Trigger: CTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGA...AGTGAAAGTACTGAATAACATCACTAATGATCTCAGACTGAAAGATTGGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR GCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTGCTCTTGTCCCCCATTaGCGAATTTTACATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVALVPH*RILHSS
Trigger: TGAAGAATGTAAAATTCGGCAATGGGGGACAAGAGC...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTTCCAAGGTAAGGTTTTaGCTTTTTAAGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVSKVRF*LFKLDG
Trigger: GCCGTCCAACTTAAAAAGGCAAAACCTTACCTTGGA...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGTCATGCTGAAATTTTaGAAATGCTCTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LISDIPNRLIMQMILSETVMLKF*KCSVSM
Trigger: CATGGACACAGAGCATTTCCAAAATTTCAGCATGAC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACAAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: LFICLHLLGTISSVKPETKQSCH*ASIKFH
Trigger: GTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTT...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR GCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTCTGAAATTTTGGAAATaGTCTGTGTCCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVLKFWK*SVSMRL
Trigger: CAACCTCATGGACACAGAGCATTTCCAAAATTTCAG...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTTTTAATATCAACTGCTaGTCTTTCTGCAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVFNINC*SFCRQS
Trigger: TGACTGCCTGCAGAAAGACCAGCAGTTGATATTAAA...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIKQSCH*ASIKFH
Trigger: GTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp TACAAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCCATAATTTCTGCTaGTACATTGTAAACACGCTC +
Preference number: 4 (lower is better)
Translates to: YKLINIQCRDFQYYRRARSHNFC*YIVNTL
Trigger: GAGCGTGTTTACAATGTATCAGCAGAAATTATGGCT...CCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR TCA 90 bp AAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCATATTTCTCAAGGTCTaGGAATGTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: KLINIQCRDFQYYRRARSIFLKV*ECSQSF
Trigger: GAAAGATTGGGAACATTCTCAGACCTTGAGAAATAT...GCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGGTCCAGGAGGACCTTaGATTAAAGTGATATTTCTC +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIGPGGP*IKVIFL
Trigger: GAGAAATATCACTTTAATTCAAGGTCCTCCTGGACC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR GCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTTCCAAGGTAAGGTTTTaGCTTTTTAAGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVISKVRF*LFKLDG
Trigger: GCCGTCCAACTTAAAAAGGCAAAACCTTACCTTGGA...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTATTGGAGCCAATTACTaGTATGCATTTCTATTACCC +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVIGANY*YAFLLP
Trigger: GGGTAATAGAAATGCATACCAGTAATTGGCTCCAAT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTACAATATGTGTGGATTaGAGATTTTGCAATCTAGGC +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVTICVD*RFCNLG
Trigger: GCCTAGATTGCAAAATCTCCAATCCACACATATTGT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTTTTGCCTTTTTAAGTTaGACGGCTGTGAGTCTACCA +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIFAFLS*TAVSLP
Trigger: TGGTAGACTCACAGCCGTCCAACTTAAAAAGGCAAA...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGATCAGTTGTCATGCTaGAATTTTGGAAATGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIDQLSC*NFGNAL
Trigger: CAGAGCATTTCCAAAATTTCAGCATGACAACTGATC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTTCAGCATCTGGTACATaGAGAAAGGAAATGACACAT +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVISASGT*RKEMTH
Trigger: ATGTGTCATTTCCTTTCTTCATGTACCAGATGCTGA...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350896.3
CDS-3UTR GCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAACCACTCTTCCTTCTaGACTGAAGATGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVINHSSF*TEDVCI
Trigger: AATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTATGTCTAAAATATGCTaGATTCTCTTCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: QTVETTLPSALKMFALFVMSKIC*ILFSML
Trigger: CAACATGGAGAAGAGAATCCAGCATATTTTAGACAT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTTGTGAGTCTACCACTTaGTTATTATGTGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVICESTT*LLCVVR
Trigger: TCTCACCACACATAATAACCAAGTGGTAGACTCACA...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTATTATAAAGTGCAAGTaGCTCCAGCATCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIIIKCK*LQHLQN
Trigger: ATTCTGAAGATGCTGGAGTCACTTGCACTTTATAAT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR TCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGACACATTCCTGCGTTaGAAATCTTTCTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIDTFLR*KSFLMC
Trigger: ACACATTAAGAAAGATTTTCAACGCAGGAATGTGTC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350896.3
CDS-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTATTGGAGCCAATTACTaGTATGCATTTCTATTACCC +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIIGANY*YAFLLP
Trigger: GGGTAATAGAAATGCATACCAGTAATTGGCTCCAAT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CCA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTCATCCCAAGTGCCTATaGGTTGTTAATAGTACTATT +
Preference number: 4 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIHPKCL*VVNSTI
Trigger: AATAGTACTATTAACAACCCATAGGCACTTGGGATG...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGCCCCTTTCTGGCCTTTaGGTCCAGAATTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQPLSGL*VQNFLA
Trigger: GGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGG...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CAA 90 bp AATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGGGAGAACTGAGGACTGGTaGGAGCAGCCCTCCAGTCCG +
Preference number: 5 (lower is better)
Translates to: NPRGPLSPVGPRSPFSPGRTEDW*EQPSSP
Trigger: CGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT...CCCGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS CCA 90 bp AGTACCTTGTCCAAAGTGAGCTGCCTTGTGCACGGCTTGAACACCTaGGTATCCCAAGCTCCTACAGACGACCTGTCCAACGCGCACTTC +
Preference number: 5 (lower is better)
Translates to: STLSKVSCLVHGLNT*VSQAPTDDLSNAHF
Trigger: GAAGTGCGCGTTGGACAGGTCGTCTGTAGGAGCTTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCAGCTCACTTTGGACAAGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS-3UTR CAA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGTTCCCACTTCAGGAGTaGAGCTGCCACTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQFPLQE*SCHYSN
Trigger: ATTGGAATAGTGGCAGCTCAACTCCTGAAGTGGGAA...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp TTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCCCCCTTTCTGGCCTTTaGGTCCAGAATTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LSRGEGPFNEMVAEDVPPPLSGL*VQNFLA
Trigger: GGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGG...GGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTCACCTCTGGACAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CAA 90 bp AGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGAGGTGTCCAGAATGGGTTGGATAAATaGCCCAAGCTCGACTACACT +
Preference number: 5 (lower is better)
Translates to: RTEDWLEQPSSPCMRGVQNGLDK*PKLDYT
Trigger: AGTGTAGTCGAGCTTGGGCAATTTATCCAACCCATT...CTGGACACCTCTCATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp AATGGGTGGCAGAGAACTGAGGACTGGTTGGAGCAGCCCTCCAGTCCGTGCATGAGTCACAAAAGGATCTaGGAAGTCAGTTGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: NGWQRTEDWLEQPSSPCMSHKRI*EVSCAD
Trigger: ATCTGCACAACTGACTTCCAAGATCCTTTTGTGACT...CATGCACGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCTCTGCCACCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS GCA 90 bp TGCTGTTCACCTTCAAGAGCAGAGGGAGTAAGTTTTATGGACTCTTaGACTCCTTTATATATGGCGGCAACGTCCAGGCGCGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: CCSPSRAEGVSFMDS*TPLYMAATSRRGGS
Trigger: TGAGCCACCGCGCCTGGACGTTGCCGCCATATATAAAGGAGTGCAAGAGTCCATAAAACTTACTCCCTCTGCTCTTGAAGGTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518343.5
CDS-3UTR CAA 90 bp AATCCTCGTGGACCACTTTCTCCAGTGGGACCTCGATCTCCTTTTTCACCCGGGATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: NPRGPLSPVGPRSPFSPGISVLL*IVKVIP
Trigger: TGGGATCACTTTCACAATCAACAGGAGGACACTGAT...CCCGGGTGAAAAAGGAGATCGAGGTCCCACTGGAGAAAGTGGTCCACGAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CAA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCAGTTGTGCAGATGACTaGTCCAGAGGTGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSSCADD*SRGEGP
Trigger: AGGCCCTTCACCTCTGGACAAGTCATCTGCACAACT...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CAA 90 bp TTGTCCAGAGGTGAAGGGCCTTTTAATGAGATGGTAGCAGAGGATGTCCCGCCCGGACTTCAGTTTCTCTaGAAGGGAAGGGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: LSRGEGPFNEMVAEDVPPGLQFL*KGRAVF
Trigger: AAAAACAGCCCTTCCCTTCAAGAGAAACTGAAGTCC...GGGCGGGACATCCTCTGCTACCATCTCATTAAAAGGCCCTTCACCTCTGGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp GCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTGGACCTGGAAAGGGAACCAAAGTCATTaGGAGGAGTCACAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: ANCSPITFKTRRTYWTWKGNQSH*EESQKD
Trigger: ATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCC...TTTCCAGGTCCAATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS GCA 90 bp GAGAGGGATGAGAACTGCAAACACGAGGAGGTAAAGGGCAATCAGTaGAGCTTTGAAGGACTTCAGTTTCTCTTGAAGGGAAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: ERDENCKHEEVKGNQ*SFEGLQFLLKGRAV
Trigger: AACAGCCCTTCCCTTCAAGAGAAACTGAAGTCCTTCAAAGCTGCACTGATTGCCCTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS GCA 90 bp CTTCAGGAGTTGAGCTGCCACTATTCCAATGAGAGGGATGAGAACTaGAAACACGAGGAGGTAAAGGGCAATCAGTGCAGCTTTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LQELSCHYSNERDEN*KHEEVKGNQCSFEG
Trigger: TCCTTCAAAGCTGCACTGATTGCCCTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTCATTGGAATAGTGGCAGCTCAACTCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGCCCCTTTCTGGCCTTTaGGTCCAGAATTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVPLSGL*VQNFLA
Trigger: GGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGG...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCGCAATCAGTGCAGCTTaGAAGGACTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSAISAA*KDFSFS
Trigger: AGAGAAACTGAAGTCCTTCAAAGCTGCACTGATTGC...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTTCCCACTTCAGGAGTaGAGCTGCCACTATTCCAAT +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLFPLQE*SCHYSN
Trigger: ATTGGAATAGTGGCAGCTCAACTCCTGAAGTGGGAA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCTGGAGATTTCATCTATaGCATTCCCATGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSWRFHL*HSHVPG
Trigger: TCCAGGGACATGGGAATGCAATAGATGAAATCTCCA...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGGCTCTTGTCCCCCATaGCCGAATTTTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLGSCPP*PNFTFF
Trigger: GAAGAATGTAAAATTCGGCAATGGGGGACAAGAGCC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CTTCCAGGAAAGCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTAGTCACAAAAGGATCTaGGAAGTCAGTTGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: LPGKPIAPRSPLRPGGPISHKRI*EVSCAD
Trigger: ATCTGCACAACTGACTTCCAAGATCCTTTTGTGACT...AATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS TCA 90 bp AAGGGAAGGGCTGTTTTTAGGATTCGGAGGAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCACAGATTCGGAGCAGCTATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: KGRAVFRIRRKQSCH*ASIKFHRFGAAISV
Trigger: GACACTGATAGCTGCTCCGAATCTGTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTTCCTCCGAATCCTAAAAACAGCCCTTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
ENST00000518026.5
ENST00000518960.5
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGGACTTCAGTTTCTCTaGAAGGGAAGGGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLGLQFL*KGRAVF
Trigger: AAAAACAGCCCTTCCCTTCAAGAGAAACTGAAGTCC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCTGGAGATTTCATCTATaGCATTCCCATGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFWRFHL*HSHVPG
Trigger: TCCAGGGACATGGGAATGCAATAGATGAAATCTCCA...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTGGAGATTTCATCTATaGCATTCCCATGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLWRFHL*HSHVPG
Trigger: TCCAGGGACATGGGAATGCAATAGATGAAATCTCCA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CTTCCAGGAAAGCCAATTGCTCCCCGATCACCTTTAAGACCCGGAGGACCTATTCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: LPGKPIAPRSPLRPGGPILFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...AATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCTGCCTTGTGCACGGCTaGAACACCTGGGTATCCCAA +
Preference number: 5 (lower is better)
Translates to: LISDIPNRLIMQMILSETCLVHG*NTWVSQ
Trigger: TTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCA...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCTTCATTCAGCCATATaGGACCAGTACCTTGTCCAA +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLLHSAI*DQYLVQ
Trigger: TTGGACAAGGTACTGGTCCAATATGGCTGAATGAAG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGGCCCTGGGGATGGGTaGACTACCAACAAAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LISDIPNRLIMQMILSETGPGDG*TTNKRL
Trigger: CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGTTTTGCCTTTTTAAGTaGGACGGCTGTGAGTCTACC +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLFCLFK*DGCEST
Trigger: GGTAGACTCACAGCCGTCCAACTTAAAAAGGCAAAA...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTATACAAGAGTGGGAATAAAAATGCTGAGATACACAGAGGCATACCATCTAGAAGAACTGAGGACTGGTaGGAGCAGCCCTCCAGTCCG +
Preference number: 5 (lower is better)
Translates to: LYKSGNKNAEIHRGIPSRRTEDW*EQPSSP
Trigger: CGGACTGGAGGGCTGCTCCAACCAGTCCTCAGTTCT...TCTAGATGGTATGCCTCTGTGTATCTCAGCATTTTTATTCCCACTCTTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCCACACAATATCTTACTaGATCCTCACAACAACCCTG +
Preference number: 5 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSHTISY*ILTTTL
Trigger: CAGGGTTGTTGTGAGGATCAAGTAAGATATTGTGTG...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS TCA 90 bp CGCTCCTCTAATTTACTGATTTCTCGGAGGAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCACAGATTCGGAGCAGCTATCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RSSNLLISRRKQSCH*ASIKFHRFGAAISV
Trigger: GACACTGATAGCTGCTCCGAATCTGTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTTCCTCCGAGAAATCAGTAAATTAGAGGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519060.6
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGGAAGCAAAGCTGTCATaGAGCGAGCATCAAATTTCA +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLEAKLS*SEHQIS
Trigger: TGAAATTTGATGCTCGCTCAATGACAGCTTTGCTTC...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAGGAGAGAAGGCCATGTGGAAGTCAGGTACAACACGGGAACCAAAGTCATTTGCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: QERRPCGSQVQHGNQSHLLFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...CAAATGACTTTGGTTCCCGTGTTGTACCTGACTTCCACATGGCCTTCTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381998.8
ENST00000519060.6
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTCCCCTTTCTGGCCTTTaGGTCCAGAATTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVPLSGL*VQNFLA
Trigger: GGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGG...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp ATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGAGCAGATATCCCCTTTCTGGCCTTTaGGTCCAGAATTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: INIQCRDFQYYRRARSRYPLSGL*VQNFLA
Trigger: GGCCAGGAAATTCTGGACCAAAAGGCCAGAAAGGGG...ATATCTGCTCCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAATGTGAACAGGCTCTaGTCCCCCATTGCCGAATTT +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVNVNRL*SPIAEF
Trigger: AAATTCGGCAATGGGGGACAAGAGCCTGTTCACATT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGAAAGACTCCAAACAGTaGAAACCACTCTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLKDSKQ*KPLFLL
Trigger: CAGAAGGAAGAGTGGTTTCAACTGTTTGGAGTCTTT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGGAGTAATTGGAGTAAGAAGAGGTATGAGCATGGGAGCAGAGGCCCAAACAGCTTTGGTTTAAATGGGTaGGATAAATTGCCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: WSNWSKKRYEHGSRGPNSFGLNG*DKLPKL
Trigger: GAGCTTGGGCAATTTATCCAACCCATTTAAACCAAA...GCTGTTTGGGCCTCTGCTCCCATGCTCATACCTCTTCTTACTCCAATTACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVISVLL*IVKVIP
Trigger: TGGGATCACTTTCACAATCAACAGGAGGACACTGAT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGGCAATCAGTGCAGCTTaGAAGGACTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVAISAA*KDFSFS
Trigger: AGAGAAACTGAAGTCCTTCAAAGCTGCACTGATTGC...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLLFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGAATTACAGCCAGGGTTaGAGACAGAAAGTGTACATT +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLNYSQG*RQKVYI
Trigger: AATGTACACTTTCTGTCTCAAACCCTGGCTGTAATT...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTTCACACTCTACACTATGGCCCTGGGGATGGGTTGACTACCAACAAAAGGTTGCTTCATTCAGCCATATaGGACCAGTACTTAATGTGT +
Preference number: 5 (lower is better)
Translates to: FHTLHYGPGDGLTTNKRLLHSAI*DQYLMC
Trigger: ACACATTAAGTACTGGTCCAATATGGCTGAATGAAG...CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCCATAGTGTAGAGTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350896.3
CDS-3UTR CAA 90 bp GTGATAGGGGAGAGAGGTGATGGTGGAGTAATTGGAGTAAGAAGAGGTATGAGCACTGATTTCCTCTTGTaGTTTGAAGGTATTCTCTTG +
Preference number: 5 (lower is better)
Translates to: VIGERGDGGVIGVRRGMSTDFLL*FEGILL
Trigger: CAAGAGAATACCTTCAAACAACAAGAGGAAATCAGT...GCTCATACCTCTTCTTACTCCAATTACTCCACCATCACCTCTCTCCCCTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGGCCCTGGGGATGGGTaGACTACCAACAAAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIGPGDG*TTNKRL
Trigger: CAACCTTTTGTTGGTAGTCAACCCATCCCCAGGGCC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAACTGCTGGTCTTTCTGCAGGCAGTCACTTTCAGGGTAGAATTACTGGGTTTCCCAAGTGCCTATGGGTaGTTAATAGTACTATTAACA +
Preference number: 5 (lower is better)
Translates to: QLLVFLQAVTFRVELLGFPSAYG*LIVLLT
Trigger: TGTTAATAGTACTATTAACAACCCATAGGCACTTGG...GAAACCCAGTAATTCTACCCTGAAAGTGACTGCCTGCAGAAAGACCAGCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCGGACTTCAGTTTCTCTaGAAGGGAAGGGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: LISDIPNRLIMQMILSETGLQFL*KGRAVF
Trigger: AAAAACAGCCCTTCCCTTCAAGAGAAACTGAAGTCC...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTTATTGGACCAGTACCTaGTCCAAAGTGAGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVYWTST*SKVSCL
Trigger: AAGGCAGCTCACTTTGGACAAGGTACTGGTCCAATA...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262101.10
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGTGTGGATTGGAGATTTaGCAATCTAGGCACAAAAGA +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVCGLEI*QSRHKR
Trigger: TCTTTTGTGCCTAGATTGCAAAATCTCCAATCCACA...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAATTACAGCCAGGGTTaGAGACAGAAAGTGTACATT +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVNYSQG*RQKVYI
Trigger: AATGTACACTTTCTGTCTCAAACCCTGGCTGTAATT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS CCA 90 bp AAATGCTCTGTGTCCATGAGGTTGGCTTCCATGTCTAAAATATGCTaGATTCTCTTCTCCATGTTGCTCATGTGTTCCATAAAGACTTCT +
Preference number: 5 (lower is better)
Translates to: KCSVSMRLASMSKIC*ILFSMLLMCSIKTS
Trigger: AGAAGTCTTTATGGAACACATGAGCAACATGGAGAAGAGAATCCAGCATATTTTAGACATGGAAGCCAACCTCATGGACACAGAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVISVLL*IVKVIP
Trigger: TGGGATCACTTTCACAATCAACAGGAGGACACTGAT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TGCCTTTTTAAGTTGGACGGCTGTGAGTCTACCACTTGGTTATTATGTGTGGTGAACAATATGTGTGGATaGGAGATTTTGCAATCTAGG +
Preference number: 5 (lower is better)
Translates to: CLFKLDGCESTTWLLCVVNNMCG*EILQSR
Trigger: CCTAGATTGCAAAATCTCCAATCCACACATATTGTT...CACCACACATAATAACCAAGTGGTAGACTCACAGCCGTCCAACTTAAAAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS CCA 90 bp AAACAGGCAATCTGTGTAGACTGTGTATGTCTCCTCATACTCTTCTaGGGTTATCTTTCAGAGCATCAATATGTTATCAGCAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KQAICVDCVCLLILF*GYLSEHQYVISRKV
Trigger: GACTTTTCTGCTGATAACATATTGATGCTCTGAAAGATAACCCCAGAAGAGTATGAGGAGACATACACAGTCTACACAGATTGCCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518026.5
CDS-3UTR CAA 90 bp TTGTTCATTTGTCTACATCTCTTAGGGACAATTAGCTCTGTAAAACCAGAGACAATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCA +
Preference number: 5 (lower is better)
Translates to: LFICLHLLGTISSVKPETISVLL*IVKVIP
Trigger: TGGGATCACTTTCACAATCAACAGGAGGACACTGAT...TGTCTCTGGTTTTACAGAGCTAATTGTCCCTAAGAGATGTAGACAAATGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS-3UTR CAA 90 bp CTGATCTCAGACATCCCAAACAGGCTGATAATGCAAATGATTCTTTCAGAAACCCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: LISDIPNRLIMQMILSETLFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...GGTTTCTGAAAGAATCATTTGCATTATCAGCCTGTTTGGGATGTCTGAGATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTGGCTCTTGTCCCCCATaGCCGAATTTTACATTCTTC +
Preference number: 5 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIGSCPP*PNFTFF
Trigger: GAAGAATGTAAAATTCGGCAATGGGGGACAAGAGCC...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAATGTGAACAGGCTCTaGTCCCCCATTGCCGAATTT +
Preference number: 5 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVINVNRL*SPIAEF
Trigger: AAATTCGGCAATGGGGGACAAGAGCCTGTTCACATT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTGCATTTCTATTACCCTaGGCCTTTGTAATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVAFLLP*AFVIWK
Trigger: CTTCCAGATTACAAAGGCCAAGGGTAATAGAAATGC...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TTATACAAGAGTGGGAATAAAAATGCTGAGATACACAGAGGCATACCATCTAGAGGGAACCAAAGTCATTaGGAGGAGTCACAAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LYKSGNKNAEIHRGIPSRGNQSH*EESQKD
Trigger: ATCCTTTTGTGACTCCTCCAAATGACTTTGGTTCCC...TCTAGATGGTATGCCTCTGTGTATCTCAGCATTTTTATTCCCACTCTTGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381998.8
CDS TCA 90 bp CCTCATACTCTTCTGGGGTTATCTTTCAGAGCATCAATATGTTCTTaGTACGATAATTCCACGAGGCACACATATATCAGAACTTCACAT +
Preference number: 5 (lower is better)
Translates to: PHTLLGLSFRASICS*YDNSTRHTYIRTSH
Trigger: ATGTGAAGTTCTGATATATGTGTGCCTCGTGGAATTATCGTATCAAGAACATATTGATGCTCTGAAAGATAACCCCAGAAGAGTATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522130.1
CDS-3UTR CAA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTTTTTGCCTTTTTAAGTaGGACGGCTGTGAGTCTACC +
Preference number: 5 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIFCLFK*DGCEST
Trigger: GGTAGACTCACAGCCGTCCAACTTAAAAAGGCAAAA...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS TCA 90 bp GAGGAAAACAAGGTACTTAGCTGCAGAAGAATGTCATTAAATCTTTaGTCAGTTGTCATGCTGAAATTTTGGAAATGCTCTGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: EENKVLSCRRMSLNL*SVVMLKFWKCSVSM
Trigger: CATGGACACAGAGCATTTCCAAAATTTCAGCATGACAACTGATCAAAGATTTAATGACATTCTTCTGCAGCTAAGTACCTTGTTTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS TCA 90 bp TTTCATCTTTCCATGGTAGTTGCCATTATTCTGCAATATCACAAGTaGTTGAAAGATATGTTAACTTGGTTGGAGGCACCAAATTCCCCT +
Preference number: 5 (lower is better)
Translates to: FHLSMVVAIILQYHK*LKDMLTWLEAPNSP
Trigger: AGGGGAATTTGGTGCCTCCAACCAAGTTAACATATCTTTCAATCACTTGTGATATTGCAGAATAATGGCAACTACCATGGAAAGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521876.5
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTACTGATTTCCTCTTGTaGTTTGAAGGTATTCTCTTG +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVTDFLL*FEGILL
Trigger: CAAGAGAATACCTTCAAACAACAAGAGGAAATCAGT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp TACAAACTTATCAACATACAATGCAGAGATTTTCAATACTATAGGAGGGCGAGGCTGTTCCAAATGCACTaGTTCTTCTTTCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: YKLINIQCRDFQYYRRARLFQMH*FFFHSH
Trigger: ATGGCTATGAAAGAAGAACAAGTGCATTTGGAACAG...CCTCGCCCTCCTATAGTATTGAAAATCTCTGCATTGTATGTTGATAAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522672.5
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTAACAATATGTGTGGATaGGAGATTTTGCAATCTAGG +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVNNMCG*EILQSR
Trigger: CCTAGATTGCAAAATCTCCAATCCACACATATTGTT...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAATCTAGGCACAAAAGATATCTTCTGATCCCTTCCGTTATTCAGAAAGTAATTAAAGACTCCAAACAGTaGAAACCACTCTTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QSRHKRYLLIPSVIQKVIKDSKQ*KPLFLL
Trigger: CAGAAGGAAGAGTGGTTTCAACTGTTTGGAGTCTTT...AATTACTTTCTGAATAACGGAAGGGATCAGAAGATATCTTTTGTGCCTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS-3UTR CAA 90 bp CAAACAGTTGAAACCACTCTTCCTTCTGCACTGAAGATGTTTGCATTGTTTGTTCCAAGTGCCTATGGGTaGTTAATAGTACTATTAACA +
Preference number: 5 (lower is better)
Translates to: QTVETTLPSALKMFALFVPSAYG*LIVLLT
Trigger: TGTTAATAGTACTATTAACAACCCATAGGCACTTGG...AACAAACAATGCAAACATCTTCAGTGCAGAAGGAAGAGTGGTTTCAACTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000350896.3
CDS TCA 90 bp AATCTCATTTCCTCTTCGCTGTCATTTCCTTTTCCCGTGAGACTTTaGGTTATATCATTTGCATTAGTTGAACTAACTGAGCAATTCTTC +
Preference number: 5 (lower is better)
Translates to: NLISSSLSFPFPVRL*VISFALVELTEQFF
Trigger: GAAGAATTGCTCAGTTAGTTCAACTAATGCAAATGATATAACTCAAAGTCTCACGGGAAAAGGAAATGACAGCGAAGAGGAAATGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS TCA 90 bp TTCAGCATCTGGTACATGAAGAAAGGAAATGACACATTCCTGCGTTaGAAATCTTTCTTAATGTGTTTCAATAGCACTCTCATCAATGCA +
Preference number: 5 (lower is better)
Translates to: FSIWYMKKGNDTFLR*KSFLMCFNSTLINA
Trigger: TGCATTGATGAGAGTGCTATTGAAACACATTAAGAAAGATTTTCAACGCAGGAATGTGTCATTTCCTTTCTTCATGTACCAGATGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350896.3
CDS GCA 90 bp ATGTTATCAGCAGAAAAGTCACCCATAGCCAAGTACGTAAAACAATaGAAACTGATCTCTGGTAAAGGAATTATCTCCAATTACAATACC +
Preference number: 5 (lower is better)
Translates to: MLSAEKSPIAKYVKQ*KLISGKGIISNYNT
Trigger: GGTATTGTAATTGGAGATAATTCCTTTACCAGAGATCAGTTTGCATTGTTTTACGTACTTGGCTATGGGTGACTTTTCTGCTGATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518026.5
CDS GCA 90 bp ACTTTGTCTCTAAAGTTTACTGTGTACCTGGATTCCCAGGAACAGTaGTTGAAAAATAGTATACACTCAGACACTATTTTCAAATGGTAT +
Preference number: 5 (lower is better)
Translates to: TLSLKFTVYLDSQEQ*LKNSIHSDTIFKWY
Trigger: ATACCATTTGAAAATAGTGTCTGAGTGTATACTATTTTTCAAGCACTGTTCCTGGGAATCCAGGTACACAGTAAACTTTAGAGACAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS TCA 72 bp CACTGGCCGCTGTGGAGTATCTCCACCCTCCCCTCGTaGGGGCCGCTCCCACCGACCAGTCGAACTTTCGTA +
Preference number: 6 (lower is better)
Translates to: HWPLWSISTLPS*GPLPPTSRTFV
Trigger: TACGAAAGTTCGACTGGTCGGTGGGAGCGGCCCTCACGAGGGGAGGGTGGAGATACTCCACAGCGGCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS CCA 72 bp TCCAAAGTGAGCTGCCTTGTGCACGGCTTGAACACCTaGGTATCCCAAGCTCCTACAGACGACCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: SKVSCLVHGLNT*VSQAPTDDLSN
Trigger: GTTGGACAGGTCGTCTGTAGGAGCTTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCAGCTCACTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS CAA 72 bp AGTACCTTGTCCAAAGTGAGCTGCCTTGTGCACGGCTaGAACACCTGGGTATCCCAAGCTCCTACAGACGAC +
Preference number: 6 (lower is better)
Translates to: STLSKVSCLVHG*NTWVSQAPTDD
Trigger: GTCGTCTGTAGGAGCTTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCAGCTCACTTTGGACAAGGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS CAA 90 bp TATTGGACCAGTACCTTGTCCAAAGTGAGCTGCCTTGTGCACGGCTaGAACACCTGGGTATCCCAAGCTCCTACAGACGACCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: YWTSTLSKVSCLVHG*NTWVSQAPTDDLSN
Trigger: GTTGGACAGGTCGTCTGTAGGAGCTTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCAGCTCACTTTGGACAAGGTACTGGTCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS GCA 72 bp CAGCCATATTGGACCAGTACCTTGTCCAAAGTGAGCTaGCTTGTGCACGGCTTGAACACCTGGGTATCCCAA +
Preference number: 6 (lower is better)
Translates to: QPYWTSTLSKVS*LVHGLNTWVSQ
Trigger: TTGGGATACCCAGGTGTTCAAGCCGTGCACAAGGCAGCTCACTTTGGACAAGGTACTGGTCCAATATGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262101.10
ENST00000445506.6
CDS CAA 90 bp GTGCTGTTCACCTTCAAGAGCAGAGGGAGTAAGTTTTATGGACTCTaGCACTCCTTTATATATGGCGGCAACGTCCAGGCGCGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: VLFTFKSRGSKFYGL*HSFIYGGNVQARWL
Trigger: GAGCCACCGCGCCTGGACGTTGCCGCCATATATAAAGGAGTGCAAGAGTCCATAAAACTTACTCCCTCTGCTCTTGAAGGTGAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518343.5
CDS GCA 72 bp TTGAGCTGCCACTATTCCAATGAGAGGGATGAGAACTaGAAACACGAGGAGGTAAAGGGCAATCAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LSCHYSNERDEN*KHEEVKGNQCS
Trigger: GCTGCACTGATTGCCCTTTACCTCCTCGTGTTTGCAGTTCTCATCCCTCTCATTGGAATAGTGGCAGCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS CAA 72 bp ACCTTCAAGAGCAGAGGGAGTAAGTTTTATGGACTCTaGCACTCCTTTATATATGGCGGCAACGTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: TFKSRGSKFYGL*HSFIYGGNVQA
Trigger: CGCCTGGACGTTGCCGCCATATATAAAGGAGTGCAAGAGTCCATAAAACTTACTCCCTCTGCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518343.5
CDS CAA 90 bp AGCATCAAATTTCACAGATTCGGAGCAGCTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCACTGCTCCATACTTCTGGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SIKFHRFGAAISVLL*IVKVIPLLHTSGSL
Trigger: CAGGCTCCCAGAAGTATGGAGCAGTGGGATCACTTTCACAATCAACAGGAGGACACTGATAGCTGCTCCGAATCTGTGAAATTTGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518960.5
CDS CAA 90 bp GAGGTAAAGGGCAATCAGTGCAGCTTTGAAGGACTTCAGTTTCTCTaGAAGGGAAGGGCTGTTTTTAGGATTCGGAGGAAGCAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: EVKGNQCSFEGLQFL*KGRAVFRIRRKQSC
Trigger: ACAGCTTTGCTTCCTCCGAATCCTAAAAACAGCCCTTCCCTTCAAGAGAAACTGAAGTCCTTCAAAGCTGCACTGATTGCCCTTTACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
ENST00000518960.5
CDS GCA 72 bp GAGAACTGCAAACACGAGGAGGTAAAGGGCAATCAGTaGAGCTTTGAAGGACTTCAGTTTCTCTTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: ENCKHEEVKGNQ*SFEGLQFLLKG
Trigger: TCCCTTCAAGAGAAACTGAAGTCCTTCAAAGCTGCACTGATTGCCCTTTACCTCCTCGTGTTTGCAGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
ENST00000518960.5
CDS CAA 72 bp TTTCACAGATTCGGAGCAGCTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCACTGCTCCATACTTGG +
Preference number: 6 (lower is better)
Translates to: FHRFGAAISVLL*IVKVIPLLHTW
Trigger: CCAAGTATGGAGCAGTGGGATCACTTTCACAATCAACAGGAGGACACTGATAGCTGCTCCGAATCTGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445506.6
CDS CAA 72 bp TTTCACAGATTCGGAGCAGCTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCACTGCTCCATACTTCC +
Preference number: 6 (lower is better)
Translates to: FHRFGAAISVLL*IVKVIPLLHTS
Trigger: GGAAGTATGGAGCAGTGGGATCACTTTCACAATCAACAGGAGGACACTGATAGCTGCTCCGAATCTGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518026.5
CDS TCA 72 bp GCTGTTTTTAGGATTCGGAGGAAGCAAAGCTGTCATTaGGCGAGCATCAAATTTCACAGATTCGGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: AVFRIRRKQSCH*ASIKFHRFGAA
Trigger: AGCTGCTCCGAATCTGTGAAATTTGATGCTCGCTCAATGACAGCTTTGCTTCCTCCGAATCCTAAAAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
ENST00000518026.5
ENST00000518960.5
CDS CAA 72 bp TTTCACAGATTCGGAGCAGCTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCACTGCTCCATACTTCT +
Preference number: 6 (lower is better)
Translates to: FHRFGAAISVLL*IVKVIPLLHTS
Trigger: AGAAGTATGGAGCAGTGGGATCACTTTCACAATCAACAGGAGGACACTGATAGCTGCTCCGAATCTGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000381998.8
ENST00000518960.5
ENST00000519060.6
CDS CAA 90 bp AGCATCAAATTTCACAGATTCGGAGCAGCTATCAGTGTCCTCCTGTaGATTGTGAAAGTGATCCCACTGCTCCATACTTCTTTCGTCCTA +
Preference number: 6 (lower is better)
Translates to: SIKFHRFGAAISVLL*IVKVIPLLHTSFVL
Trigger: TAGGACGAAAGAAGTATGGAGCAGTGGGATCACTTTCACAATCAACAGGAGGACACTGATAGCTGCTCCGAATCTGTGAAATTTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000381998.8
ENST00000519060.6
CDS CAA 90 bp TGGGTAAACAAGGAAGGGAGTAAAAGTGAGAAGTTATCAAGGTCGTaGTTAAAAGCATGCACTGGTGTCACAGGCAGGTGTTCCAATTCC +
Preference number: 6 (lower is better)
Translates to: WVNKEGSKSEKLSRS*LKACTGVTGRCSNS
Trigger: GGAATTGGAACACCTGCCTGTGACACCAGTGCATGCTTTTAACAACGACCTTGATAACTTCTCACTTTTACTCCCTTCCTTGTTTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CCA 72 bp CAGGAATGGCAAGAGCAAAATGCCCTTGGGCTCTCCTaGTTTTTACAGCACCATATGTATTTCATCTTTCCA +
Preference number: 6 (lower is better)
Translates to: QEWQEQNALGLS*FLQHHMYFIFP
Trigger: TGGAAAGATGAAATACATATGGTGCTGTAAAAACCAGGAGAGCCCAAGGGCATTTTGCTCTTGCCATTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521876.5
CDS CAA 72 bp AAGGAAGGGAGTAAAAGTGAGAAGTTATCAAGGTCGTaGTTAAAAGCATGCACTGGTGTCACAGGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: KEGSKSEKLSRS*LKACTGVTGRC
Trigger: ACACCTGCCTGTGACACCAGTGCATGCTTTTAACAACGACCTTGATAACTTCTCACTTTTACTCCCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CAA 90 bp TCTGTAGGCAATAAACTCCTCAGGAATGGCAAGAGCAAAATGCCCTaGGGCTCTCCTGGTTTTTACAGCACCATATGTATTTCATCTTTC +
Preference number: 6 (lower is better)
Translates to: SVGNKLLRNGKSKMP*GSPGFYSTICISSF
Trigger: GAAAGATGAAATACATATGGTGCTGTAAAAACCAGGAGAGCCCAAGGGCATTTTGCTCTTGCCATTCCTGAGGAGTTTATTGCCTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521876.5
CDS CAA 90 bp GTTGATGTCTTTTCCTACTGGAACAGTGGACTAAGATCAGGAACTTaGTCTCTAAAGTTTACTGTGTACCTGGATTCCCAGGAACAGTGC +
Preference number: 6 (lower is better)
Translates to: VDVFSYWNSGLRSGT*SLKFTVYLDSQEQC
Trigger: GCACTGTTCCTGGGAATCCAGGTACACAGTAAACTTTAGAGACAAAGTTCCTGATCTTAGTCCACTGTTCCAGTAGGAAAAGACATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS CCA 72 bp GTGTCCATGAGGTTGGCTTCCATGTCTAAAATATGCTaGATTCTCTTCTCCATGTTGCTCATGTGTTCCATA +
Preference number: 6 (lower is better)
Translates to: VSMRLASMSKIC*ILFSMLLMCSI
Trigger: TATGGAACACATGAGCAACATGGAGAAGAGAATCCAGCATATTTTAGACATGGAAGCCAACCTCATGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS CCA 72 bp ACAGGCAGGTGTTCCAATTCCAATTTTCCTGTGTCCTaGATGTATTACCAAGGCAAGGACTCTAATTTTCCT +
Preference number: 6 (lower is better)
Translates to: TGRCSNSNFPVS*MYYQGKDSNFP
Trigger: AGGAAAATTAGAGTCCTTGCCTTGGTAATACATCCAGGACACAGGAAAATTGGAATTGGAACACCTGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CAA 72 bp AATAAACTCCTCAGGAATGGCAAGAGCAAAATGCCCTaGGGCTCTCCTGGTTTTTACAGCACCATATGTATT +
Preference number: 6 (lower is better)
Translates to: NKLLRNGKSKMP*GSPGFYSTICI
Trigger: AATACATATGGTGCTGTAAAAACCAGGAGAGCCCAAGGGCATTTTGCTCTTGCCATTCCTGAGGAGTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521876.5
CDS CAA 90 bp CTGGATTCTCTTCTCCATGTTGCTCATGTGTTCCATAAAGACTTCTaGAAATCTCATTTCCTCTTCGCTGTCATTTCCTTTTCCCGTGAG +
Preference number: 6 (lower is better)
Translates to: LDSLLHVAHVFHKDF*KSHFLFAVISFSRE
Trigger: CTCACGGGAAAAGGAAATGACAGCGAAGAGGAAATGAGATTTCAAGAAGTCTTTATGGAACACATGAGCAACATGGAGAAGAGAATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS GCA 72 bp GCATCTTCAGAATGTGAACAGGCTCTTGTCCCCCATTaGCGAATTTTACATTCTTCAATAGATGATTCTCTC +
Preference number: 6 (lower is better)
Translates to: ASSECEQALVPH*RILHSSIDDSL
Trigger: GAGAGAATCATCTATTGAAGAATGTAAAATTCGGCAATGGGGGACAAGAGCCTGTTCACATTCTGAAGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000445506.6
CDS GCA 72 bp AAAAGTGAGAAGTTATCAAGGTCGTTGTTAAAAGCATaGACTGGTGTCACAGGCAGGTGTTCCAATTCCAAT +
Preference number: 6 (lower is better)
Translates to: KSEKLSRSLLKA*TGVTGRCSNSN
Trigger: ATTGGAATTGGAACACCTGCCTGTGACACCAGTGCATGCTTTTAACAACGACCTTGATAACTTCTCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CAA 72 bp TTTTCCTACTGGAACAGTGGACTAAGATCAGGAACTTaGTCTCTAAAGTTTACTGTGTACCTGGATTCCCAG +
Preference number: 6 (lower is better)
Translates to: FSYWNSGLRSGT*SLKFTVYLDSQ
Trigger: CTGGGAATCCAGGTACACAGTAAACTTTAGAGACAAAGTTCCTGATCTTAGTCCACTGTTCCAGTAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS CAA 90 bp GCAATGTGGTATTCAAACTTATTAAGGACTTGGAGATTTCATCTATaGCATTCCCATGTCCCTGGACTGAGGAAAACAAGGTACTTAGCT +
Preference number: 6 (lower is better)
Translates to: AMWYSNLLRTWRFHL*HSHVPGLRKTRYLA
Trigger: AGCTAAGTACCTTGTTTTCCTCAGTCCAGGGACATGGGAATGCAATAGATGAAATCTCCAAGTCCTTAATAAGTTTGAATACCACATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262101.10
ENST00000350896.3
ENST00000355282.6
ENST00000381998.8
ENST00000445506.6
CDS CCA 72 bp ATCTGTGTAGACTGTGTATGTCTCCTCATACTCTTCTaGGGTTATCTTTCAGAGCATCAATATGTTATCAGC +
Preference number: 6 (lower is better)
Translates to: ICVDCVCLLILF*GYLSEHQYVIS
Trigger: GCTGATAACATATTGATGCTCTGAAAGATAACCCCAGAAGAGTATGAGGAGACATACACAGTCTACACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518026.5
CDS TCA 72 bp CTTCTGGGGTTATCTTTCAGAGCATCAATATGTTCTTaGTACGATAATTCCACGAGGCACACATATATCAGA +
Preference number: 6 (lower is better)
Translates to: LLGLSFRASICS*YDNSTRHTYIR
Trigger: TCTGATATATGTGTGCCTCGTGGAATTATCGTATCAAGAACATATTGATGCTCTGAAAGATAACCCCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522130.1
CDS GCA 72 bp GCAGAAAAGTCACCCATAGCCAAGTACGTAAAACAATaGAAACTGATCTCTGGTAAAGGAATTATCTCCAAT +
Preference number: 6 (lower is better)
Translates to: AEKSPIAKYVKQ*KLISGKGIISN
Trigger: ATTGGAGATAATTCCTTTACCAGAGATCAGTTTGCATTGTTTTACGTACTTGGCTATGGGTGACTTTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518026.5
CDS TCA 72 bp CAGCATTCTCTTTGTTTTGGCAACATAAATCAATGGTaGGAAGTAAAACAGGCAATCTGTGTAGACTGTGTA +
Preference number: 6 (lower is better)
Translates to: QHSLCFGNINQW*EVKQAICVDCV
Trigger: TACACAGTCTACACAGATTGCCTGTTTTACTTCTCACCATTGATTTATGTTGCCAAAACAAAGAGAATGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518026.5
ENST00000521876.5
CDS GCA 72 bp CTAAAGTTTACTGTGTACCTGGATTCCCAGGAACAGTaGTTGAAAAATAGTATACACTCAGACACTATTTTC +
Preference number: 6 (lower is better)
Translates to: LKFTVYLDSQEQ*LKNSIHSDTIF
Trigger: GAAAATAGTGTCTGAGTGTATACTATTTTTCAAGCACTGTTCCTGGGAATCCAGGTACACAGTAAACTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS CAA 72 bp AAAGGCTATAAAATACGGACCTCCTCAGGTAGCTCTTaGTTTTGGCAACATAAATCAATGGTGAGAAGTAAA +
Preference number: 6 (lower is better)
Translates to: KGYKIRTSSGSS*FWQHKSMVRSK
Trigger: TTTACTTCTCACCATTGATTTATGTTGCCAAAACAAAGAGCTACCTGAGGAGGTCCGTATTTTATAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CAA 90 bp GTATTGGATGAATGGAGGAAATTAGAAGTAAAGTCATTTCACTTTTaGGAAGAAGTTAGGTGTTACGATCCTGAGAGCTGTAAAGTCCAA +
Preference number: 6 (lower is better)
Translates to: VLDEWRKLEVKSFHF*EEVRCYDPESCKVQ
Trigger: TTGGACTTTACAGCTCTCAGGATCGTAACACCTAACTTCTTCCAAAAAGTGAAATGACTTTACTTCTAATTTCCTCCATTCATCCAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS TCA 72 bp TGGATGTATTACCAAGGCAAGGACTCTAATTTTCCTTaGCTCCCATTTTCCCATATATTAAACAAAGGCTAT +
Preference number: 6 (lower is better)
Translates to: WMYYQGKDSNFP*LPFSHILNKGY
Trigger: ATAGCCTTTGTTTAATATATGGGAAAATGGGAGTCAAGGAAAATTAGAGTCCTTGCCTTGGTAATACATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517522.1
CDS CAA 72 bp AAGTTTACTGTGTACCTGGATTCCCAGGAACAGTGCTaGAAAAATAGTATACACTCAGACACTATTTTCAAA +
Preference number: 6 (lower is better)
Translates to: KFTVYLDSQEQC*KNSIHSDTIFK
Trigger: TTTGAAAATAGTGTCTGAGTGTATACTATTTTTCAAGCACTGTTCCTGGGAATCCAGGTACACAGTAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520846.1
ENST00000522130.1
CDS TCA 72 bp ATAGTATTTCAGCATCTGGTACATGAAGAAAGGAAATaGCACATTCCTGCGTTGAAAATCTTTCTTAATGTG +
Preference number: 6 (lower is better)
Translates to: IVFQHLVHEERK*HIPALKIFLNV
Trigger: CACATTAAGAAAGATTTTCAACGCAGGAATGTGTCATTTCCTTTCTTCATGTACCAGATGCTGAAATACTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350896.3