Pregenerated sensors for MSMB (Homo sapiens)
Ensembl gene IDs: ENSG00000263639Ensembl transcript IDs: ENST00000581478.5, ENST00000582163.3, ENST00000663171.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCCATGCATTTCCTGGTTaGATCTCCTGGAACTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGHAFPG*ISWNSL Trigger: GAGGGAGTTCCAGGAGATTCAACCAGGAAATGCATG...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGGAGGAGAATGAGGCCTaGCCTGGGAGCCCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMEENEA*PGSPVP Trigger: AGGCACAGGGCTCCCAGGCCAGGCCTCATTCTCCTC...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCTCACAGTTGTCAGTCTaGCACTCCGAGTTTATTGGG | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGSQLSV*HSEFIG Trigger: CCCAATAAACTCGGAGTGGCAGACTGACAACTGTGA...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCCTCTACCTGAACTTGTaGCAAGAAAGCCTGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGLYLNL*QESLCL Trigger: GAGACACAGGCTTTCTTGGCACAAGTTCAGGTAGAG...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAGAGGAGAATGAGGCCTaGCCTGGGAGCCCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: FLLIGMATQSLTIRGQRREENEA*PGSPVP Trigger: AGGCACAGGGCTCCCAGGCCAGGCCTCATTCTCCTC...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCTGCAGTCCTCCTTCTTaGAGATTCTTTGGCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGCSPPS*RFFGSC Trigger: ACAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCA...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCTGGCTACACAATCATTaGCTATTAGAGGCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGWLHNH*LLEARG Trigger: TCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCA...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCATAAAGTCACGAAGGTaGCAAAGATCACAACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGIKSRR*QRSQRC Trigger: GCAGCGTTGTGATCTTTGCCACCTTCGTGACTTTAT...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCGATCCATGCATTTCCTaGTTGAATCTCCTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: GMATQSLTIRGQRRMRPGDPCIS*LNLLEL Trigger: GAGTTCCAGGAGATTCAACCAGGAAATGCATGGATC...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGGTAGCAAGGTGGTCTTaGTGGAGCCAAGCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMVARWS*WSQAAV Trigger: CACTGCTGCTTGGCTCCAGCAAGACCACCTTGCTAC...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTTCACAGTTGTCAGTCTaGCACTCCGAGTTTATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGMATQSLTIRGQRRMRPSQLSV*HSEFIG Trigger: CCCAATAAACTCGGAGTGGCAGACTGACAACTGTGA...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGATCTTGGAGTCCAGTGTaGAGTGTCAGTGCATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FLLIGMATQSLTIRGQRRSWSPV*SVSAWG Trigger: CCCCCATGCACTGACACTGCACACTGGACTCCAAGA...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGAGGACACTGGCATCATaGAGAATCTCCCTAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: LIGMATQSLTIRGQRRMRRTLAS*RISLGM Trigger: CATTCCTAGGGAGATTCTGCATGATGCCAGTGTCCT...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGTGCAGTCCTCCTTCTTaGAGATTCTTTGGCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LIGMATQSLTIRGQRRMRCSPPS*RFFGSC Trigger: ACAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCA...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGCATGCATTTCCTGGTTaGATCTCCTGGAACTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMHAFPG*ISWNSL Trigger: GAGGGAGTTCCAGGAGATTCAACCAGGAAATGCATG...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCAAAGATCACAACGCTaGCCAGGAGAACATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LIGMATQSLTIRGQRRMRQRSQR*PGEHSL Trigger: CAATGAATGTTCTCCTGGGCAGCGTTGTGATCTTTG...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTATAAAGTCACGAAGGTaGCAAAGATCACAACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGMATQSLTIRGQRRMRPIKSRR*QRSQRC Trigger: GCAGCGTTGTGATCTTTGCCACCTTCGTGACTTTAT...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGGATCCATGCATTTCCTaGTTGAATCTCCTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LIGMATQSLTIRGQRRMRDPCIS*LNLLEL Trigger: GAGTTCCAGGAGATTCAACCAGGAAATGCATGGATC...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGATGGTGTGGAGGGTTCTaGCTCTTAGGGCAAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLLIGMATQSLTIRGQRRWCGGF*LLGQGF Trigger: AAACCCTTGCCCTAAGAGCCAGAACCCTCCACACCA...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTCCACTCCGAGTTTATTaGGTGTTTGTTTCCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: IGMATQSLTIRGQRRMRPPLRVY*VFVSFE Trigger: CTCAAAGGAAACAAACACCCAATAAACTCGGAGTGG...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGCTAGGAATGATGGTGTaGAGGGTTCTGGCTCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRLGMMV*RVLALR Trigger: CCTAAGAGCCAGAACCCTCCACACCATCATTCCTAG...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGTGCAGTCCTCCTTCTTaGAGATTCTTTGGCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMCSPPS*RFFGSC Trigger: ACAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCA...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGTGGCTACACAATCATTaGCTATTAGAGGCCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMWLHNH*LLEARG Trigger: TCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCA...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGCAAAGATCACAACGCTaGCCAGGAGAACATTCATTG | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMQRSQR*PGEHSL Trigger: CAATGAATGTTCTCCTGGGCAGCGTTGTGATCTTTG...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTAATAGCATGATGCATTaGATAAAGTCACGAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IGMATQSLTIRGQRRMRPNSMMH*IKSRRW Trigger: CCACCTTCGTGACTTTATGCAATGCATCATGCTATT...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | TTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGCTGTTTCGTAGCAAGTaGATGTCTCACAGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLIGMATQSLTIRGQRRMLFRSK*MSHSCQ Trigger: CTGACAACTGTGAGACATGCACTTGCTACGAAACAG...CATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| 3UTR CAA 72 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATaGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KIFLLIGMATQS*TIRGQRRMRPG Trigger: GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGGGTGTTTGTTTCCTTTaGGATCCATGCATTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRGVCFL*DPCISW Trigger: CCAGGAAATGCATGGATCTCAAAGGAAACAAACACC...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGCTGTTTCGTAGCAAGTaGATGTCTCACAGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRLFRSK*MSHSCQ Trigger: CTGACAACTGTGAGACATGCACTTGCTACGAAACAG...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGGGTGTAGAAACATCCTaGTTGAATCTCCTGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRGVETS*LNLLEL Trigger: GAGTTCCAGGAGATTCAACCAGGATGTTTCTACACC...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581478.5 |
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| CDS-3UTR CCA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGACCACTCCGAGTTTATTaGGTGTTTGTTTCCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: FLLIGMATQSLTIRGQRRPLRVY*VFVSFE Trigger: CTCAAAGGAAACAAACACCCAATAAACTCGGAGTGG...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGGGTGTTTGTTTCCTTTaGGATCCATGCATTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KIFLLIGMATQSLTIRGQGVCFL*DPCISW Trigger: CCAGGAAATGCATGGATCTCAAAGGAAACAAACACC...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGCAAAGATCACAACGCTaGCCAGGAGAACATTCATTG | + |
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Preference number: 4 (lower is better) Translates to: KIFLLIGMATQSLTIRGQQRSQR*PGEHSL Trigger: CAATGAATGTTCTCCTGGGCAGCGTTGTGATCTTTG...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAATAGCATGATGCATTaGATAAAGTCACGAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRNSMMH*IKSRRW Trigger: CCACCTTCGTGACTTTATGCAATGCATCATGCTATT...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR GCA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGACATCCAGGCAAAGCTaGATCAAACTTTTATACTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLLIGMATQSLTIRGQRTSRQS*IKLLYW Trigger: CCAGTATAAAAGTTTGATGCAGCTTTGCCTGGATGT...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR TCA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAAAAAAGGGTGCAACATaGAATTTCTGTTTCGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLLIGMATQSLTIRGQRRKKGAT*NFCFVA Trigger: TGCTACGAAACAGAAATTTCATGTTGCACCCTTTTT...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCGTGCATGTCTCACAGTaGTCAGTCTGCCACTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: GMATQSLTIRGQRRMRPGVHVSQ*SVCHSE Trigger: CTCGGAGTGGCAGACTGACAACTGTGAGACATGCAC...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGGGTAGCAAGGTGGTCTaGCTGGAGCCAAGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIGMATQSLTIRGQRRMRGSKVV*LEPSSS Trigger: ACTGCTGCTTGGCTCCAGCAAGACCACCTTGCTACC...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS GCA 90 bp | TCTCAAAAAGTCCTCTTCAGAGAGGGTCCAAGGACACTGGCATCATaGAGAATCTCCCTAGGAATGATGGTGTGGAGGGTTCTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SQKVLFREGPRTLAS*RISLGMMVWRVLAL Trigger: AAGAGCCAGAACCCTCCACACCATCATTCCTAGGGAGATTCTGCATGATGCCAGTGTCCTTGGACCCTCTCTGAAGAGGACTTTTTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCTTGCAGTCCTCCTTCTaGAAGATTCTTTGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GMATQSLTIRGQRRMRPGLQSSF*KILWQL Trigger: CAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCAA...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | GGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTGGCGGGTGTTTGTTTCCTTaGAGATCCATGCATTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GMATQSLTIRGQRRMRPGGCLFP*RSMHFL Trigger: CAGGAAATGCATGGATCTCAAAGGAAACAAACACCC...GCCAGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS TCA 90 bp | GAGAGGGCAACCACGCATTCGACATCATTGGGAATGATAACAAGGTaGGAACACATTGAGTGTTTACAGAGGGTTGACTCCAGGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: ERATTHSTSLGMITR*EHIECLQRVDSRVQ Trigger: CTGTACCCTGGAGTCAACCCTCTGTAAACACTCAATGTGTTCTCACCTTGTTATCATTCCCAATGATGTCGAATGCGTGGTTGCCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGGTAGAAACATCCTGGTaGAATCTCCTGGAACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LIGMATQSLTIRGQRRMRVETSW*NLLELP Trigger: AGGGAGTTCCAGGAGATTCAACCAGGATGTTTCTAC...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581478.5 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTCAGAACAGGTCTTTTTaGGGTCCTTCTTCTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: IGMATQSLTIRGQRRMRPQNRSF*GPSSPP Trigger: TGGTGGAGAAGAAGGACCCAAAAAAGACCTGTTCTG...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | CTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCAGAACAGGTCTTTTTaGGGTCCTTCTTCTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LIGMATQSLTIRGQRRMRQNRSF*GPSSPP Trigger: TGGTGGAGAAGAAGGACCCAAAAAAGACCTGTTCTG...CCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | ATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGAGGCCTATGGCTACACAATCATaGACTATTAGAGGCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: IGMATQSLTIRGQRRMRPMATQS*TIRGQR Trigger: CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCAT...AGGCCTCATTCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGTGTTTACAGAGGGTaGACTCCAGGGTACAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: IFLLIGMATQSLTIRGQRSVYRG*TPGYRH Trigger: GTGCCTGTACCCTGGAGTCAACCCTCTGTAAACACT...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGCCATGCATTTCCTGGTaGAATCTCCTGGAACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: IFLLIGMATQSLTIRGQRPCISW*NLLELP Trigger: AGGGAGTTCCAGGAGATTCAACCAGGAAATGCATGG...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGGTGCATGTCTCACAGTaGTCAGTCTGCCACTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQVHVSQ*SVCHSE Trigger: CTCGGAGTGGCAGACTGACAACTGTGAGACATGCAC...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGGTGCTCTACCTGAACTaGTGCCAAGAAAGCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: IFLLIGMATQSLTIRGQRVLYLN*CQESLC Trigger: ACACAGGCTTTCTTGGCACAAGTTCAGGTAGAGCAC...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS GCA 90 bp | TTGAGACAAAAAGGGTGCAACATGAAATTTCTGTTTCGTAGCAAGTaGATGTCTCACAGTTGTCAGTCTGCCACTCCGAGTTTATTGGGT | + |
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Preference number: 5 (lower is better) Translates to: LRQKGCNMKFLFRSK*MSHSCQSATPSLLG Trigger: ACCCAATAAACTCGGAGTGGCAGACTGACAACTGTGAGACATGCACTTGCTACGAAACAGAAATTTCATGTTGCACCCTTTTTGTCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGATTGCAGTCCTCCTTCTaGAAGATTCTTTGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FLLIGMATQSLTIRGQRRLQSSF*KILWQL Trigger: CAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCAA...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAATGGCTACACAATCATaGACTATTAGAGGCCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLLIGMATQSLTIRGQRRMATQS*TIRGQR Trigger: CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCAT...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | TTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGAGAGGGTGTTTGTTTCCTTaGAGATCCATGCATTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FLLIGMATQSLTIRGQRRGCLFP*RSMHFL Trigger: CAGGAAATGCATGGATCTCAAAGGAAACAAACACCC...TCTCCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGTCCACCACGATATACTaGCAGTCCTCCTTCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQSTTIY*QSSFLK Trigger: CTTCAAGAAGGAGGACTGCAAGTATATCGTGGTGGA...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGCAGAACAGGTCTTTTTaGGGTCCTTCTTCTCCACCA | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQQNRSF*GPSSPP Trigger: TGGTGGAGAAGAAGGACCCAAAAAAGACCTGTTCTG...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGTTGCAGTCCTCCTTCTaGAAGATTCTTTGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQLQSSF*KILWQL Trigger: CAACTGCCAAAGAATCTTCAAGAAGGAGGACTGCAA...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000581478.5 ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | ATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGAGGGAGTTTATTGGGTGTTaGTTTCCTTTGAGATCCATG | + |
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Preference number: 5 (lower is better) Translates to: IFLLIGMATQSLTIRGQREFIGC*FPLRSM Trigger: CATGGATCTCAAAGGAAACAAACACCCAATAAACTC...CCTCTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGGTAGAAACACTGTCATaGAGACAAAAAGGGTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQVETLS*RQKGCN Trigger: GTTGCACCCTTTTTGTCTCAATGACAGTGTTTCTAC...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS-3UTR CAA 90 bp | AAAATCTTTTTACTGATAGGCATGGCTACACAATCATTGACTATTAGAGGCCAGGAGTTTATTGGGTGTTaGTTTCCTTTGAGATCCATG | + |
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Preference number: 5 (lower is better) Translates to: KIFLLIGMATQSLTIRGQEFIGC*FPLRSM Trigger: CATGGATCTCAAAGGAAACAAACACCCAATAAACTC...CTGGCCTCTAATAGTCAATGATTGTGTAGCCATGCCTATCAGTAAAAAGATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS CAA 72 bp | ATGGGGGCTGTGACTGTGACTGGTAGCAAGGTGGTCTaGCTGGAGCCAAGCAGCAGTGTGGTTTCAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: MGAVTVTGSKVV*LEPSSSVVSVL Trigger: GAGCACTGAAACCACACTGCTGCTTGGCTCCAGCAAGACCACCTTGCTACCAGTCACAGTCACAGCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS CAA 90 bp | TGTCAGTGCATGGGGGCTGTGACTGTGACTGGTAGCAAGGTGGTCTaGCTGGAGCCAAGCAGCAGTGTGGTTTCAGTGCTCTACCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CQCMGAVTVTGSKVV*LEPSSSVVSVLYLN Trigger: GTTCAGGTAGAGCACTGAAACCACACTGCTGCTTGGCTCCAGCAAGACCACCTTGCTACCAGTCACAGTCACAGCCCCCATGCACTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS TCA 72 bp | TGGAGCCAAGCAGCAGTGTGGTTTCAGTGCTCTACCTaGACTTGTGCCAAGAAAGCCTGTGTCTCTGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: WSQAAVWFQCST*TCAKKACVSGR Trigger: ACGGCCAGAGACACAGGCTTTCTTGGCACAAGTTCAGGTAGAGCACTGAAACCACACTGCTGCTTGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS GCA 72 bp | GTCCTCTTCAGAGAGGGTCCAAGGACACTGGCATCATaGAGAATCTCCCTAGGAATGATGGTGTGGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VLFREGPRTLAS*RISLGMMVWRV Trigger: AACCCTCCACACCATCATTCCTAGGGAGATTCTGCATGATGCCAGTGTCCTTGGACCCTCTCTGAAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS CAA 72 bp | CCAAGCAGCAGTGTGGTTTCAGTGCTCTACCTGAACTaGTGCCAAGAAAGCCTGTGTCTCTGGCCGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: PSSSVVSVLYLN*CQESLCLWPLV Trigger: TACTAACGGCCAGAGACACAGGCTTTCTTGGCACAAGTTCAGGTAGAGCACTGAAACCACACTGCTGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS GCA 72 bp | CAAGGGTGCAACATGAAATTTCTGTTTCGTAGCAAGTaGATGTCTCACAGTTGTCAGTCTGCCACTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: QGCNMKFLFRSK*MSHSCQSATPS Trigger: ACTCGGAGTGGCAGACTGACAACTGTGAGACATGCACTTGCTACGAAACAGAAATTTCATGTTGCACCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582163.3 |
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| CDS CAA 90 bp | CATGTCTCACAGTTGTCAGTCTGCCACTCCGAGTTTATTGGGTGTTaGTTTCCTTTGAGATCCATGCATTTCCTGGTTGAATCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HVSQLSVCHSEFIGC*FPLRSMHFLVESPG Trigger: TCCAGGAGATTCAACCAGGAAATGCATGGATCTCAAAGGAAACAAACACCCAATAAACTCGGAGTGGCAGACTGACAACTGTGAGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS GCA 72 bp | AAAGGGTGCAACATGAAATTTCTGTTTCGTAGCAAGTaGATGTCTCACAGTTGTCAGTCTGCCACTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: KGCNMKFLFRSK*MSHSCQSATPS Trigger: ACTCGGAGTGGCAGACTGACAACTGTGAGACATGCACTTGCTACGAAACAGAAATTTCATGTTGCACCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS TCA 72 bp | ACCACGCATTCGACATCATTGGGAATGATAACAAGGTaGGAACACATTGAGTGTTTACAGAGGGTTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: TTHSTSLGMITR*EHIECLQRVDS Trigger: GGAGTCAACCCTCTGTAAACACTCAATGTGTTCTCACCTTGTTATCATTCCCAATGATGTCGAATGCGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663171.1 |
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| CDS CCA 72 bp | TGTCTCACAGTTGTCAGTCTGCCACTCCGAGTTTATTaGGTGTTTGTTTCCTTTGAGATCCATGCATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLTVVSLPLRVY*VFVSFEIHAFP Trigger: AGGAAATGCATGGATCTCAAAGGAAACAAACACCCAATAAACTCGGAGTGGCAGACTGACAACTGTGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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| CDS CAA 72 bp | CAGTTGTCAGTCTGCCACTCCGAGTTTATTGGGTGTTaGTTTCCTTTGAGATCCATGCATTTCCTGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QLSVCHSEFIGC*FPLRSMHFLVE Trigger: TTCAACCAGGAAATGCATGGATCTCAAAGGAAACAAACACCCAATAAACTCGGAGTGGCAGACTGACAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582163.3 ENST00000663171.1 |
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