RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MSLN (Homo sapiens)

Ensembl gene IDs: ENSG00000102854

Ensembl transcript IDs: ENST00000382862.7, ENST00000545450.7, ENST00000561896.1, ENST00000563651.5, ENST00000563941.5, ENST00000566269.6, ENST00000566549.5, ENST00000569566.2

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTCTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTaGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGGCGGG +
Preference number: 1 (lower is better)
Translates to: VSAGGMFPFTEREFS*GGTGTTRACSWPGG
Trigger: CCCGCCTGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566549.5
3UTR-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RLLSASSLGVERGPPVPADPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
3UTR-3UTR CCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LLSASSLGVERGPPVPAPDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
3UTR-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: FTEREFSWGGTGTTRACSDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
3UTR-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LQGACSRLLSASSLGVERDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGCGGGATGCTGCGGATaGTGGGCTGGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGAGCCG*WAGPAR
Trigger: CCGTGCTGGGCCAGCCCATCATCCGCAGCATCCCGC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACCCGGACACGCTCCGTaGTCAGGCCGGACACCTCCG +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPPGHAP*SGRTPP
Trigger: CGGAGGTGTCCGGCCTGAGCACGGAGCGTGTCCGGG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGGGACCACCCGTGCCTaGTCCTGGCCAGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGGTTRA*SWPGGD
Trigger: ATCCCCGCCTGGCCAGGAGCAGGCACGGGTGGTCCC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAAACGGGGACCACCCGTaGCTGCTCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPNGDHP*LLLARR
Trigger: CCGCCTGGCCAGGAGCAGGCACGGGTGGTCCCCGTT...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCACCGCGGCCGGAGGATaGTCCGTTCAGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGTAAGG*SVQAAA
Trigger: GGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGT...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGGCTCAGAGAGCCGGTaGGCCAGACAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGGSESR*ARQRSC
Trigger: GCAGCTGCGCTGTCTGGCTCACCGGCTCTCTGAGCC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGGCTCAGAGAGCCGGTaGGCCAGACAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPGSESR*ARQRSC
Trigger: GCAGCTGCGCTGTCTGGCTCACCGGCTCTCTGAGCC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGCCTCCTGCTGGTCCTaGTCCAGGGGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWASCWS*SRGPGQ
Trigger: CTGCCCGGGACCCCTGGACCAGGACCAGCAGGAGGC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACCTGCAGAGCCGCCCTaGCTGCCTCCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPPAEPP*LPPAGP
Trigger: AGGACCAGCAGGAGGCAGCCAGGGCGGCTCTGCAGG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCAGAGCCGCCCTGGCTaGCTCCTGCTGGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWQSRPG*LLLVLV
Trigger: GACCAGGACCAGCAGGAGGCAGCCAGGGCGGCTCTG...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGTCCCGCACCGGGCGGTaGCGCTCCTCCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGSRTGR*RSSAFR
Trigger: CCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGA...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGGTAGCCGTTGGGGATaGCGCCCTGTAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWGSRWG*RPVAPA
Trigger: GGCTGGGGCTACAGGGCGGCATCCCCAACGGCTACC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPRLPPG*VPRGAL
Trigger: CAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCT...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGCGGTCCATCTGGGTaGCCAGCAGGGCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWRGPSG*PAGPHP
Trigger: TGGATGCGGCCCTGCTGGCCACCCAGATGGACCGCG...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCTTCACGCGGTCCATCTaGGTGGCCAGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGFTRSI*VASRAA
Trigger: TGCGGCCCTGCTGGCCACCCAGATGGACCGCGTGAA...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCATTCACGCGGTCCATCTaGGTGGCCAGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPFTRSI*VASRAA
Trigger: TGCGGCCCTGCTGGCCACCCAGATGGACCGCGTGAA...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGGACCAGGTAGCCGTTaGGGATGCCGCCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGGPGSR*GCRPVA
Trigger: GGCTACAGGGCGGCATCCCCAACGGCTACCTGGTCC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGCGGGATGCTGCGGATaGTGGGCTGGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPAGCCG*WAGPAR
Trigger: CCGTGCTGGGCCAGCCCATCATCCGCAGCATCCCGC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCAGGGTCCTCGAGGGCTaGACCCATCCGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGRVLEG*THPRLK
Trigger: CTTCAGCCTCGGATGGGTGCAGCCCTCGAGGACCCT...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCCCGGACACGCTCCGTaGTCAGGCCGGACACCTCCG +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPPGHAP*SGRTPP
Trigger: CGGAGGTGTCCGGCCTGAGCACGGAGCGTGTCCGGG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCGGACACGCTCCGTaGTCAGGCCGGACACCTCCG +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAPGHAP*SGRTPP
Trigger: CGGAGGTGTCCGGCCTGAGCACGGAGCGTGTCCGGG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCTCCCGCACCGGGCGGTaGCGCTCCTCCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPSRTGR*RSSAFR
Trigger: CCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGA...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTAACGGGGACCACCCGTaGCTGCTCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPNGDHP*LLLARR
Trigger: CCGCCTGGCCAGGAGCAGGCACGGGTGGTCCCCGTT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGAGGCAGAAAGAGGAGTaGGTGGCGCTGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWRQKEE*VALAAP
Trigger: GGGCGCTGCCAGCGCCACGCACTCCTCTTTCTGCCT...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCT +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPKRVQA*GPENAS
Trigger: AGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTT...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCCTCCTGCTGGTCCTaGTCCAGGGGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPASCWS*SRGPGQ
Trigger: CTGCCCGGGACCCCTGGACCAGGACCAGCAGGAGGC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCGCCTCCTGCTGGTCCTaGTCCAGGGGTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAASCWS*SRGPGQ
Trigger: CTGCCCGGGACCCCTGGACCAGGACCAGCAGGAGGC...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCACCGCGGCCGGAGGATaGTCCGTTCAGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSTAAGG*SVQAAA
Trigger: GGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCCTTCAAATCCTCCGTaGGGGCCCCACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGPSNPP*GPHPGR
Trigger: CCTTCCTGGGTGGGGCCCCCACGGAGGATTTGAAGG...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCCGTGCCTGCTCCTaGCCAGGCGGGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGTRACS*PGGDPQ
Trigger: CTGGGGATCCCCGCCTGGCCAGGAGCAGGCACGGGT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCACCCGTGCCTGCTCCTaGCCAGGCGGGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSTRACS*PGGDPQ
Trigger: CTGGGGATCCCCGCCTGGCCAGGAGCAGGCACGGGT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACGAGTTCTCTTGGGGTaGAACGGGGACCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPRVLLG*NGDHPC
Trigger: GCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGCGGGATGCTGCGGATaGTGGGCTGGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERAGCCG*WAGPAR
Trigger: CCGTGCTGGGCCAGCCCATCATCCGCAGCATCCCGC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGCGGGATGCTGCGGATaGTGGGCTGGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVAGCCG*WAGPAR
Trigger: CCGTGCTGGGCCAGCCCATCATCCGCAGCATCCCGC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGCTGCTCGTAGGTaGAGGGGATGGCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWPAARR*RGWRSR
Trigger: GCGTGAACGCCATCCCCTTCACCTACGAGCAGCTGG...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACCGTCCGCAGCTTCATaGACGTGGCCAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPPSAAS*TWPSPC
Trigger: GCATGGACTTGGCCACGTTCATGAAGCTGCGGACGG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGCAGTGCCAGGACGGTaGGAACAGGTCCAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGAVPGR*EQVQVL
Trigger: TAGGACCTGGACCTGTTCTCACCGTCCTGGCACTGC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTAGGGGCGCAGCCTCCTaGCCTGTCTCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPRGAAS*PVSPAR
Trigger: CCTGGCTGGAGAGACAGGGCAGGAGGCTGCGCCCCT...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCAGAGCCGCCCTGGCTaGCTCCTGCTGGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPQSRPG*LLLVLV
Trigger: GACCAGGACCAGCAGGAGGCAGCCAGGGCGGCTCTG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSSREER*RHAATM
Trigger: CATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGA...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRASREER*RHAATM
Trigger: CATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGA...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTTCCCGCACCGGGCGGTaGCGCTCCTCCGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRSRTGR*RSSAFR
Trigger: CCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGA...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGGTAGCCGTTGGGGATaGCGCCCTGTAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPGSRWG*RPVAPA
Trigger: GGCTGGGGCTACAGGGCGGCATCCCCAACGGCTACC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGGTAGCCGTTGGGGATaGCGCCCTGTAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGGSRWG*RPVAPA
Trigger: GGCTGGGGCTACAGGGCGGCATCCCCAACGGCTACC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGGGACCACCCGTGCCTaGTCCTGGCCAGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTGTTRA*SWPGGD
Trigger: ATCCCCGCCTGGCCAGGAGCAGGCACGGGTGGTCCC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGACCACCCGTGCCTaGTCCTGGCCAGGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERGTTRA*SWPGGD
Trigger: ATCCCCGCCTGGCCAGGAGCAGGCACGGGTGGTCCC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGAACGGGGACCACCCGTaGCTGCTCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVNGDHP*LLLARR
Trigger: CCGCCTGGCCAGGAGCAGGCACGGGTGGTCCCCGTT...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAAGGCAGAAAGAGGAGTaGGTGGCGCTGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPRQKEE*VALSLL
Trigger: GAGGAGGCTCAGCGCCACGCACTCCTCTTTCTGCCT...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGGGAAGCCAAGGAGTTaGCGAGGGGAGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGGKPRS*RGERLE
Trigger: TTCCAGCCTCTCCCCTCGCCAACTCCTTGGCTTCCC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCCCTGCAGAGCCGCCCTaGCTGCCTCCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAPAEPP*LPPAGP
Trigger: AGGACCAGCAGGAGGCAGCCAGGGCGGCTCTGCAGG...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCTGCGGATGATGGGCTaGCCCAGCACGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPALRMMG*PSTGSR
Trigger: CCTGCTGCCCGTGCTGGGCCAGCCCATCATCCGCAG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCTGCGGATGATGGGCTaGCCCAGCACGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPLRMMG*PSTGSR
Trigger: CCTGCTGCCCGTGCTGGGCCAGCCCATCATCCGCAG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGACCGCGGCCGGAGGATaGTCCGTTCAGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERTAAGG*SVQAAA
Trigger: GGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCGCGGTCCATCTGGGTaGCCAGCAGGGCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPRGPSG*PAGPHP
Trigger: TGGATGCGGCCCTGCTGGCCACCCAGATGGACCGCG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGCCGCCCAGATGCTGCTaGGGGGCACGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGPPRCC*GARSSA
Trigger: AGCTGAGCTCCGTGCCCCCCAGCAGCATCTGGGCGG...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGCCCAGATGCTGCTaGGGGGCACGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAPPRCC*GARSSA
Trigger: AGCTGAGCTCCGTGCCCCCCAGCAGCATCTGGGCGG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCCGCCCAGATGCTGCTaGGGGGCACGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSPPRCC*GARSSA
Trigger: AGCTGAGCTCCGTGCCCCCCAGCAGCATCTGGGCGG...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGACGTCCAGCTGCCTTaGGTCACACGTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPDVQLP*VTRVQV
Trigger: GACCTGGACACGTGTGACCCAAGGCAGCTGGACGTC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCACCCGTGCCTGCTCCTaGCCAGGCGGGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPTRACS*PGGDPQ
Trigger: CTGGGGATCCCCGCCTGGCCAGGAGCAGGCACGGGT...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGACCCGTGCCTGCTCCTaGCCAGGCGGGGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERTRACS*PGGDPQ
Trigger: CTGGGGATCCCCGCCTGGCCAGGAGCAGGCACGGGT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGTGGGGGTGGAGAGCCTaGCAGCCTCCCGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERWGWRA*QPPGPS
Trigger: TGACGGCCCGGGAGGCTGCCAGGCTCTCCACCCCCA...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS-3UTR TCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCCACATTGGCCTTCGTaGTGCGGGAGAAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGPHWPS*CGRRNG
Trigger: CCCGTTTCTTCTCCCGCATCACGAAGGCCAATGTGG...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACCACATTGGCCTTCGTaGTGCGGGAGAAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPPHWPS*CGRRNG
Trigger: CCCGTTTCTTCTCCCGCATCACGAAGGCCAATGTGG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTCAGCTCCTCGGGGCTaGGGGAGCACAGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSSAPRG*GSTGTQ
Trigger: CTGGGTACCTGTGCTCCCTCAGCCCCGAGGAGCTGA...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTTCAGCTCCTCGGGGCTaGGGGAGCACAGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPSAPRG*GSTGTQ
Trigger: CTGGGTACCTGTGCTCCCTCAGCCCCGAGGAGCTGA...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCGTCCGCAGCTTCATaGACGTGGCCAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWPSAAS*TWPSPC
Trigger: GCATGGACTTGGCCACGTTCATGAAGCTGCGGACGG...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGCAGTGCCAGGACGGTaGGAACAGGTCCAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWAVPGR*EQVQVL
Trigger: TAGGACCTGGACCTGTTCTCACCGTCCTGGCACTGC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCAGAGCCGCCCTGGCTaGCTCCTGCTGGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERQSRPG*LLLVLV
Trigger: GACCAGGACCAGCAGGAGGCAGCCAGGGCGGCTCTG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVSREER*RHAATM
Trigger: CATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGA...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTSREER*RHAATM
Trigger: CATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGA...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGRSSCR*RRIQSR
Trigger: GCGGGACTGGATCCTACGGCAGCGGCAGGACGACCT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPRSSCR*RRIQSR
Trigger: GCGGGACTGGATCCTACGGCAGCGGCAGGACGACCT...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRARSSCR*RRIQSR
Trigger: GCGGGACTGGATCCTACGGCAGCGGCAGGACGACCT...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSRSSCR*RRIQSR
Trigger: GCGGGACTGGATCCTACGGCAGCGGCAGGACGACCT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGGTAGCCGTTGGGGATaGCGCCCTGTAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTGSRWG*RPVAPA
Trigger: GGCTGGGGCTACAGGGCGGCATCCCCAACGGCTACC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTAACGGGGACCACCCGTaGCTGCTCCTGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRNGDHP*LLLARR
Trigger: CCGCCTGGCCAGGAGCAGGCACGGGTGGTCCCCGTT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGGGAAGCCAAGGAGTTaGCGAGGGGAGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWGKPRS*RGERLE
Trigger: TTCCAGCCTCTCCCCTCGCCAACTCCTTGGCTTCCC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGRLPPG*VPRGAL
Trigger: CAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCGCGGTCCATCTGGGTaGCCAGCAGGGCCGCATCCA +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPRGPSG*PAGPHP
Trigger: TGGATGCGGCCCTGCTGGCCACCCAGATGGACCGCG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTTTCACGCGGTCCATCTaGGTGGCCAGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAFTRSI*VASRAA
Trigger: TGCGGCCCTGCTGGCCACCCAGATGGACCGCGTGAA...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCAGCGGTCGATCAGGGTaGCCACCTGTGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTSGRSG*PPVGGA
Trigger: GGCCCCTCCCACAGGTGGCCACCCTGATCGACCGCT...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382862.7
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCACGTGTCCAGGTCCTaGGGCCTGACCGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSHVSRS*GLTAQM
Trigger: CATCTGGGCGGTCAGGCCCCAGGACCTGGACACGTG...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGACGTCCAGCTGCCTTaGGTCACACGTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWDVQLP*VTRVQV
Trigger: GACCTGGACACGTGTGACCCAAGGCAGCTGGACGTC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGGACCAGGTAGCCGTTaGGGATGCCGCCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPGPGSR*GCRPVA
Trigger: GGCTACAGGGCGGCATCCCCAACGGCTACCTGGTCC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGATCCCCAGCAGGGCTaGGGCCAGCAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTDPQQG*GQQGSG
Trigger: CCCACTCCCTTGCTGGCCCCAGCCCTGCTGGGGATC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGGCCTTCTGCGCAGTTaGGTAGGGAGCTTTACCCCT +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPGLLRS*VGSFTP
Trigger: AGGGGTAAAGCTCCCTACCCAACTGCGCAGAAGGCC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGCACCCATCCGAGGCTaGAGAGCAGGAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGAPIRG*RAGTGG
Trigger: GCCTCCTGTTCCTGCTCTTCAGCCTCGGATGGGTGC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGCTCAGAGAGCCGGTaGGCCAGACAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRGSESR*ARQRSC
Trigger: GCAGCTGCGCTGTCTGGCTCACCGGCTCTCTGAGCC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACATTGGCCTTCGTaGTGCGGGAGAAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWPHWPS*CGRRNG
Trigger: CCCGTTTCTTCTCCCGCATCACGAAGGCCAATGTGG...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCCCAGCTGCTCGTAGGTaGAGGGGATGGCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAPAARR*RGWRSR
Trigger: GCGTGAACGCCATCCCCTTCACCTACGAGCAGCTGG...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCTCAGCTCCTCGGGGCTaGGGGAGCACAGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTSAPRG*GSTGTQ
Trigger: CTGGGTACCTGTGCTCCCTCAGCCCCGAGGAGCTGA...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAGGGTCCTCGAGGGCTaGACCCATCCGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGRVLEG*THPRLK
Trigger: CTTCAGCCTCGGATGGGTGCAGCCCTCGAGGACCCT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTAGGGTCCTCGAGGGCTaGACCCATCCGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPARVLEG*THPRLK
Trigger: CTTCAGCCTCGGATGGGTGCAGCCCTCGAGGACCCT...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAMVRSG*RQDGSR
Trigger: TCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGMVRSG*RQDGSR
Trigger: TCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCGTGTCCAGGTCGTCCTaGCGCTGCCGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAVSRSS*RCRRIQ
Trigger: CTGGATCCTACGGCAGCGGCAGGACGACCTGGACAC...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGTGTCCAGGTCGTCCTaGCGCTGCCGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSVSRSS*RCRRIQ
Trigger: CTGGATCCTACGGCAGCGGCAGGACGACCTGGACAC...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCT +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPKRVQA*GPENAS
Trigger: AGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCT +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSKRVQA*GPENAS
Trigger: AGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCCTGCAGAGCCGCCCTaGCTGCCTCCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRPAEPP*LPPAGP
Trigger: AGGACCAGCAGGAGGCAGCCAGGGCGGCTCTGCAGG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCTGCGGATGATGGGCTaGCCCAGCACGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRLRMMG*PSTGSR
Trigger: CCTGCTGCCCGTGCTGGGCCAGCCCATCATCCGCAG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVRLPPG*VPRGAL
Trigger: CAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCT...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPRLPPG*VPRGAL
Trigger: CAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCT...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCTTCACGCGGTCCATCTaGGTGGCCAGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTFTRSI*VASRAA
Trigger: TGCGGCCCTGCTGGCCACCCAGATGGACCGCGTGAA...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCACGTGTCCAGGTCCTaGGGCCTGACCGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTHVSRS*GLTAQM
Trigger: CATCTGGGCGGTCAGGCCCCAGGACCTGGACACGTG...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCACGTGTCCAGGTCCTaGGGCCTGACCGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVHVSRS*GLTAQM
Trigger: CATCTGGGCGGTCAGGCCCCAGGACCTGGACACGTG...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGACCCGTTCATGTTCTaGAAAGCAAGGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSASSLGVERGPPVPAPGDPFMF*KARRAL
Trigger: CAAGGCCCGCCTTGCTTTCCAGAACATGAACGGGTC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGGACCAGGTAGCCGTTaGGGATGCCGCCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTGPGSR*GCRPVA
Trigger: GGCTACAGGGCGGCATCCCCAACGGCTACCTGGTCC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCGAGTTCTCTTGGGGTaGAACGGGGACCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPRVLLG*NGDHPC
Trigger: GCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGAGCGCGAGTTCTCTTaGGGTGGAACGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGEREFS*GGTGTT
Trigger: GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACTCGGTTTCCTCAATTaGGAAGTGGGGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPLGFLN*EVGVES
Trigger: GCTCTCCACCCCCACTTCCCAATTGAGGAAACCGAG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGCACAGCAGACGGGAGTaGCCGGCCAGGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGHSRRE*PARQKE
Trigger: CTCTTTCTGCCTGGCCGGCCACTCCCGTCTGCTGTG...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545450.7
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCCTCCAGGTCCCGAGTaGCCCCTCCCAGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPPPGPE*PLPGLS
Trigger: ACTGAGACCTGGGAGGGGCCACTCGGGACCTGGAGG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGCACCCATCCGAGGCTaGAGAGCAGGAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPAPIRG*RAGTGG
Trigger: GCCTCCTGTTCCTGCTCTTCAGCCTCGGATGGGTGC...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCCAGCTGCTCGTAGGTaGAGGGGATGGCGTTCACGC +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPPAARR*RGWRSR
Trigger: GCGTGAACGCCATCCCCTTCACCTACGAGCAGCTGG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCCCGTCCGCAGCTTCATaGACGTGGCCAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAPSAAS*TWPSPC
Trigger: GCATGGACTTGGCCACGTTCATGAAGCTGCGGACGG...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGCCGTCCGCAGCTTCATaGACGTGGCCAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGPSAAS*TWPSPC
Trigger: GCATGGACTTGGCCACGTTCATGAAGCTGCGGACGG...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGGGCCTCTTGCATGCTaGGGTCTAGGACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPGPLAC*GLGPGS
Trigger: GCTACCTGGTCCTAGACCTCAGCATGCAAGAGGCCC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGGGCCTCTTGCATGCTaGGGTCTAGGACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAGPLAC*GLGPGS
Trigger: GCTACCTGGTCCTAGACCTCAGCATGCAAGAGGCCC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCGGGCCTCTTGCATGCTaGGGTCTAGGACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAGPLAC*GLGPGS
Trigger: GCTACCTGGTCCTAGACCTCAGCATGCAAGAGGCCC...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGCAGTGCCAGGACGGTaGGAACAGGTCCAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPAVPGR*EQVQVL
Trigger: TAGGACCTGGACCTGTTCTCACCGTCCTGGCACTGC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGCAGTGCCAGGACGGTaGGAACAGGTCCAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGAVPGR*EQVQVL
Trigger: TAGGACCTGGACCTGTTCTCACCGTCCTGGCACTGC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCACCGGTAGCTCTCTaGGCCTCCTCTGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTPPVAL*ASSASV
Trigger: AACCGAGGCAGAGGAGGCTCAGAGAGCTACCGGTGG...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563941.5
CDS-3UTR TCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCGTGATTGGCCACACCTaGGCCTCCTCTGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAVIGHT*ASSASV
Trigger: AACCGAGGCAGAGGAGGCTCAGGTGTGGCCAATCAC...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR GCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGAGGGTCCTCGAGGGCTaGACCCATCCGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVRVLEG*THPRLK
Trigger: CTTCAGCCTCGGATGGGTGCAGCCCTCGAGGACCCT...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVMVRSG*RQDGSR
Trigger: TCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGTGTCCAGGTCGTCCTaGCGCTGCCGTAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERVSRSS*RCRRIQ
Trigger: CTGGATCCTACGGCAGCGGCAGGACGACCTGGACAC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCAGGGGTCGAGCCGTTaGCAAGGCCATGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPQGSSR*QGHGLC
Trigger: ACACAGACCATGGCCTTGCCAACGGCTCGACCCCTG...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGGGAAGCCAAGGAGTTaGCGAGGGGAGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAGKPRS*RGERLE
Trigger: TTCCAGCCTCTCCCCTCGCCAACTCCTTGGCTTCCC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCT +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERKRVQA*GPENAS
Trigger: AGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCACGTGTCCAGGTCCTaGGGCCTGACCGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRHVSRS*GLTAQM
Trigger: CATCTGGGCGGTCAGGCCCCAGGACCTGGACACGTG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGACGTCCAGCTGCCTTaGGTCACACGTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGDVQLP*VTRVQV
Trigger: GACCTGGACACGTGTGACCCAAGGCAGCTGGACGTC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCCTTCAAATCCTCCGTaGGGGCCCCACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPPSNPP*GPHPGR
Trigger: CCTTCCTGGGTGGGGCCCCCACGGAGGATTTGAAGG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCCTTCAAATCCTCCGTaGGGGCCCCACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERPSNPP*GPHPGR
Trigger: CCTTCCTGGGTGGGGCCCCCACGGAGGATTTGAAGG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCGAGTTCTCTTGGGGTaGAACGGGGACCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERRVLLG*NGDHPC
Trigger: GCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGAGCGCGAGTTCTCTTaGGGTGGAACGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVEREREFS*GGTGTT
Trigger: GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGATTGGGAAGTGGGGGTaGAGAGCCTGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERIGKWG*RAWQPP
Trigger: GGGAGGCTGCCAGGCTCTCCACCCCCACTTCCCAAT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCACAGCAGACGGGAGTaGCCGGCCAGGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTHSRRE*PARQKE
Trigger: CTCTTTCTGCCTGGCCGGCCACTCCCGTCTGCTGTG...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545450.7
ENST00000566549.5
CDS-3UTR TCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCACATTGGCCTTCGTaGTGCGGGAGAAGAAACGGG +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAPHWPS*CGRRNG
Trigger: CCCGTTTCTTCTCCCGCATCACGAAGGCCAATGTGG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGCCTCAGGGCTCATCTTaGGGAAGAGGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGPQGSS*GRGSPG
Trigger: ACCTGGGCTACCTCTTCCTCAAGATGAGCCCTGAGG...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGGGCCTCTTGCATGCTaGGGTCTAGGACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVGPLAC*GLGPGS
Trigger: GCTACCTGGTCCTAGACCTCAGCATGCAAGAGGCCC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCATCAGGGTGGCCACCTaGGGACTCATTTCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSIRVAT*GLISCP
Trigger: AGGGCACGAAATGAGTCCTCAGGTGGCCACCCTGAT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRMVRSG*RQDGSR
Trigger: TCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTTCTCGCGGGCCTTCTTaGCTGAAGGACAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPSRGPS*LKDRLS
Trigger: AGACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGA...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGTCTCGCGGGCCTTCTTaGCTGAAGGACAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGSRGPS*LKDRLS
Trigger: AGACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGA...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGGTCCCAGAAGTTTCTaGACCTCAGCCACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWGPRSF*TSATVN
Trigger: GTTGACTGTGGCTGAGGTGCAGAAACTTCTGGGACC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCAGGGGTCGAGCCGTTaGCAAGGCCATGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPQGSSR*QGHGLC
Trigger: ACACAGACCATGGCCTTGCCAACGGCTCGACCCCTG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCAGGGGTCGAGCCGTTaGCAAGGCCATGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERQGSSR*QGHGLC
Trigger: ACACAGACCATGGCCTTGCCAACGGCTCGACCCCTG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGGGAAGCCAAGGAGTTaGCGAGGGGAGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPGKPRS*RGERLE
Trigger: TTCCAGCCTCTCCCCTCGCCAACTCCTTGGCTTCCC...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGCAGAGCGTCCATCGTaGAGACAGACCATGTCGACG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSAERPS*RQTMST
Trigger: CGTCGACATGGTCTGTCTCCACGATGGACGCTCTGC...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGTGTCTTTGTCTAGCTaGCCCCTTCCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPVSLSS*PLPFTK
Trigger: CTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACAC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGACGTCCAGCTGCCTTaGGTCACACGTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERDVQLP*VTRVQV
Trigger: GACCTGGACACGTGTGACCCAAGGCAGCTGGACGTC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTAAGCAAGGCGGGCCTTaGGATAGAGGACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPKQGGP*DRGRPA
Trigger: AGCTGGACGTCCTCTATCCCAAGGCCCGCCTTGCTT...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTAAGCAAGGCGGGCCTTaGGATAGAGGACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAKQGGP*DRGRPA
Trigger: AGCTGGACGTCCTCTATCCCAAGGCCCGCCTTGCTT...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAAGCAAGGCGGGCCTTaGGATAGAGGACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGKQGGP*DRGRPA
Trigger: AGCTGGACGTCCTCTATCCCAAGGCCCGCCTTGCTT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTAAGCAAGGCGGGCCTTaGGATAGAGGACGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPKQGGP*DRGRPA
Trigger: AGCTGGACGTCCTCTATCCCAAGGCCCGCCTTGCTT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCCTTCAAATCCTCCGTaGGGGCCCCACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRPSNPP*GPHPGR
Trigger: CCTTCCTGGGTGGGGCCCCCACGGAGGATTTGAAGG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGFRPST*GPRSFC
Trigger: GCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAA...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPFRPST*GPRSFC
Trigger: GCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAA...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAFRPST*GPRSFC
Trigger: GCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAA...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGAGCGCGAGTTCTCTTaGGGTGGAACGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTREREFS*GGTGTT
Trigger: GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGTCCTCAATTGGGAAGTaGGGGTGGAGAGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGSSIGK*GWRAWQ
Trigger: CTGCCAGGCTCTCCACCCCCACTTCCCAATTGAGGA...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000545450.7
ENST00000563941.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGATGTGCAGGGTGATTaGCCACACCTGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPDVQGD*PHLSLL
Trigger: GAGGAGGCTCAGGTGTGGCCAATCACCCTGCACATC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCCTCAGGGCTCATCTTaGGGAAGAGGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPPQGSS*GRGSPG
Trigger: ACCTGGGCTACCTCTTCCTCAAGATGAGCCCTGAGG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTCAGGGCTCATCTTaGGGAAGAGGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVPQGSS*GRGSPG
Trigger: ACCTGGGCTACCTCTTCCTCAAGATGAGCCCTGAGG...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCATGTTCCCGTTTACTaGGCGCGAGTTCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSHVPVY*ARVLLG
Trigger: CCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATG...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGATCAGGGTGGCCACCTaGGGACTCATTTCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERIRVAT*GLISCP
Trigger: AGGGCACGAAATGAGTCCTCAGGTGGCCACCCTGAT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCTCTCGCGGGCCTTCTTaGCTGAAGGACAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPSRGPS*LKDRLS
Trigger: AGACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGA...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCACCTGAGCCTCCTCTaGCTCGGTTTCCTCAATTGG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSHLSLL*LGFLNW
Trigger: CCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGGTG...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCAGGGGTCGAGCCGTTaGCAAGGCCATGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRQGSSR*QGHGLC
Trigger: ACACAGACCATGGCCTTGCCAACGGCTCGACCCCTG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGCAGAGCGTCCATCGTaGAGACAGACCATGTCGACG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTAERPS*RQTMST
Trigger: CGTCGACATGGTCTGTCTCCACGATGGACGCTCTGC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGCAGAGCGTCCATCGTaGAGACAGACCATGTCGACG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERAERPS*RQTMST
Trigger: CGTCGACATGGTCTGTCTCCACGATGGACGCTCTGC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTFRPST*GPRSFC
Trigger: GCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAA...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCTCCTCAATTGGGAAGTaGGGGTGGAGAGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPSSIGK*GWRAWQ
Trigger: CTGCCAGGCTCTCCACCCCCACTTCCCAATTGAGGA...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545450.7
ENST00000563941.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCTCGGTTTCCTCAATTaGGAAGTGGGGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPALGFLN*EVGVES
Trigger: GCTCTCCACCCCCACTTCCCAATTGAGGAAACCGAG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTAGCGGTCGATCAGGGTaGCCACCTGAGGACTCATTT +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPSGRSG*PPEDSF
Trigger: AAATGAGTCCTCAGGTGGCCACCCTGATCGACCGCT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAGCGGTCGATCAGGGTaGCCACCTGAGGACTCATTT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGSGRSG*PPEDSF
Trigger: AAATGAGTCCTCAGGTGGCCACCCTGATCGACCGCT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGCGCAGCTGCTCTGTTaGGAGCTTGACATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSAQLLC*ELDILL
Trigger: CAGAAGAATGTCAAGCTCTCAACAGAGCAGCTGCGC...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGCGCAGCTGCTCTGTTaGGAGCTTGACATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPAQLLC*ELDILL
Trigger: CAGAAGAATGTCAAGCTCTCAACAGAGCAGCTGCGC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCATTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EREFSWGGTGTTRACSWPFRALC*LQAKPS
Trigger: TGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAA...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTTCACATTCTGCTGACTaGGCGCCTTCAAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: SRLLSASSLGVERGPPVPSHSAD*APSNPP
Trigger: CGGAGGATTTGAAGGCGCTCAGTCAGCAGAATGTGA...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGTCACATTCTGCTGACTaGGCGCCTTCAAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGSHSAD*APSNPP
Trigger: CGGAGGATTTGAAGGCGCTCAGTCAGCAGAATGTGA...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCATGTTCCCGTTTACTaGGCGCGAGTTCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVHVPVY*ARVLLG
Trigger: CCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATG...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCATGTTCCCGTTTACTaGGCGCGAGTTCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPHVPVY*ARVLLG
Trigger: CCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCATGTTCCCGTTTACTaGGCGCGAGTTCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERHVPVY*ARVLLG
Trigger: CCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTATCAGGGTGGCCACCTaGGGACTCATTTCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRIRVAT*GLISCP
Trigger: AGGGCACGAAATGAGTCCTCAGGTGGCCACCCTGAT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTTCTCGCGGGCCTTCTTaGCTGAAGGACAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRSRGPS*LKDRLS
Trigger: AGACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGA...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGAGCTCATCCAGTTTATaGTTTAGGACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWSSSSL*FRTSSC
Trigger: GCAGCTGGACGTCCTAAAGCATAAACTGGATGAGCT...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCGGTCCCAGAAGTTTCTaGACCTCAGCCACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSGPRSF*TSATVN
Trigger: GTTGACTGTGGCTGAGGTGCAGAAACTTCTGGGACC...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGGTCCCAGAAGTTTCTaGACCTCAGCCACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAGPRSF*TSATVN
Trigger: GTTGACTGTGGCTGAGGTGCAGAAACTTCTGGGACC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGCTGGAAATGTTAGGTaGGTTGGCCAGGACTCCGTC +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPAGNVR*VGQDSV
Trigger: GACGGAGTCCTGGCCAACCCACCTAACATTTCCAGC...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGACCCGTTCATGTTCTaGAAAGCAAGGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVDPFMF*KARRAL
Trigger: CAAGGCCCGCCTTGCTTTCCAGAACATGAACGGGTC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGACCCGTTCATGTTCTaGAAAGCAAGGCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTDPFMF*KARRAL
Trigger: CAAGGCCCGCCTTGCTTTCCAGAACATGAACGGGTC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGCTCGGTTTCCTCAATTaGGAAGTGGGGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERLGFLN*EVGVES
Trigger: GCTCTCCACCCCCACTTCCCAATTGAGGAAACCGAG...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGCTCTGTTGAGAGCTTaGCATTCTTCTGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPALLRA*HSSVPR
Trigger: CCTTGGCACAGAAGAATGTCAAGCTCTCAACAGAGC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGCGCAGCTGCTCTGTTaGGAGCTTGACATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPAQLLC*ELDILL
Trigger: CAGAAGAATGTCAAGCTCTCAACAGAGCAGCTGCGC...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGTTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TEREFSWGGTGTTRACSWFRALC*LQAKPS
Trigger: TGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAA...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGTCACATTCTGCTGACTaGGCGCCTTCAAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERSHSAD*APSNPP
Trigger: CGGAGGATTTGAAGGCGCTCAGTCAGCAGAATGTGA...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTACGTCACATTCCACTTaGGAATGTCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPATSHST*ECPQGS
Trigger: TGAGCCCTGAGGACATTCGCAAGTGGAATGTGACGT...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCTCTCTGAGCCTCCTCTaGCTCGGTTTCCTCAATTGG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTSLSLL*LGFLNW
Trigger: CCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGAGA...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563941.5
CDS-3UTR CCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTCTCGGGGTAACCTTGTaGGTAGAGCTCATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPLGVTL*VELIQF
Trigger: AAACTGGATGAGCTCTACCCACAAGGTTACCCCGAG...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCTCGGGGTAACCTTGTaGGTAGAGCTCATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPALGVTL*VELIQF
Trigger: AAACTGGATGAGCTCTACCCACAAGGTTACCCCGAG...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGCTCGGGGTAACCTTGTaGGTAGAGCTCATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGLGVTL*VELIQF
Trigger: AAACTGGATGAGCTCTACCCACAAGGTTACCCCGAG...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGTGTCTTTGTCTAGCTaGCCCCTTCCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPAVSLSS*PLPFTK
Trigger: CTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACAC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGTGTCTTTGTCTAGCTaGCCCCTTCCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPVSLSS*PLPFTK
Trigger: CTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACAC...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCCCACCCAGGAAGGACTaGATCTTCACGAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSPPRKD*IFTKYS
Trigger: CGAATACTTCGTGAAGATCCAGTCCTTCCTGGGTGG...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTAGCGGTCGATCAGGGTaGCCACCTGAGGACTCATTT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRSGRSG*PPEDSF
Trigger: AAATGAGTCCTCAGGTGGCCACCCTGATCGACCGCT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGCTCTGTTGAGAGCTTaGCATTCTTCTGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQGACSRLLSASSLGVERALLRA*HSSVPR
Trigger: CCTTGGCACAGAAGAATGTCAAGCTCTCAACAGAGC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGCTCTGTTGAGAGCTTaGCATTCTTCTGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTALLRA*HSSVPR
Trigger: CCTTGGCACAGAAGAATGTCAAGCTCTCAACAGAGC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCGCAGCTGCTCTGTTaGGAGCTTGACATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRAQLLC*ELDILL
Trigger: CAGAAGAATGTCAAGCTCTCAACAGAGCAGCTGCGC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACTTCTTGTAGAAGATaGGGCTCTCGTCTATCTCGC +
Preference number: 4 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGTSCRR*GSRLSR
Trigger: GCGAGATAGACGAGAGCCTCATCTTCTACAAGAAGT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTACTTCTTGTAGAAGATaGGGCTCTCGTCTATCTCGC +
Preference number: 4 (lower is better)
Translates to: LLSASSLGVERGPPVPAPTSCRR*GSRLSR
Trigger: GCGAGATAGACGAGAGCCTCATCTTCTACAAGAAGT...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCACTTCTTGTAGAAGATaGGGCTCTCGTCTATCTCGC +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSTSCRR*GSRLSR
Trigger: GCGAGATAGACGAGAGCCTCATCTTCTACAAGAAGT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTACTTCTTGTAGAAGATaGGGCTCTCGTCTATCTCGC +
Preference number: 4 (lower is better)
Translates to: RLLSASSLGVERGPPVPATSCRR*GSRLSR
Trigger: GCGAGATAGACGAGAGCCTCATCTTCTACAAGAAGT...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCAGCTCATCCAGTTTATaGTTTAGGACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FTEREFSWGGTGTTRACSSSSSL*FRTSSC
Trigger: GCAGCTGGACGTCCTAAAGCATAAACTGGATGAGCT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCAGCTCATCCAGTTTATaGTTTAGGACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPFTEREFSWGGTGTTRASSSSL*FRTSSC
Trigger: GCAGCTGGACGTCCTAAAGCATAAACTGGATGAGCT...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCACGTCACATTCCACTTaGGAATGTCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTTSHST*ECPQGS
Trigger: TGAGCCCTGAGGACATTCGCAAGTGGAATGTGACGT...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCACGTCACATTCCACTTaGGAATGTCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPTSHST*ECPQGS
Trigger: TGAGCCCTGAGGACATTCGCAAGTGGAATGTGACGT...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGTCCCAGAAGTTTCTaGACCTCAGCCACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRGPRSF*TSATVN
Trigger: GTTGACTGTGGCTGAGGTGCAGAAACTTCTGGGACC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR GCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTAGGGTAACTCTGATGTaGAGGGTGATTGGCCACACC +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRRVTLM*RVIGHT
Trigger: GGTGTGGCCAATCACCCTGCACATCAGAGTTACCCT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS-3UTR CCA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGTGTCTTTGTCTAGCTaGCCCCTTCCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: CSRLLSASSLGVERGPPVVSLSS*PLPFTK
Trigger: CTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACAC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCACCCAGGAAGGACTaGATCTTCACGAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTPPRKD*IFTKYS
Trigger: CGAATACTTCGTGAAGATCCAGTCCTTCCTGGGTGG...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCCCACCCAGGAAGGACTaGATCTTCACGAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPPPRKD*IFTKYS
Trigger: CGAATACTTCGTGAAGATCCAGTCCTTCCTGGGTGG...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCTCGGGGTAACCTTGTaGGTAGAGCTCATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRLGVTL*VELIQF
Trigger: AAACTGGATGAGCTCTACCCACAAGGTTACCCCGAG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CCA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCCACCCAGGAAGGACTaGATCTTCACGAAGTATTCG +
Preference number: 4 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRPPRKD*IFTKYS
Trigger: CGAATACTTCGTGAAGATCCAGTCCTTCCTGGGTGG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR TCA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCTTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ACSRLLSASSLGVERGPPFRALC*LQAKPS
Trigger: TGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAA...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 90 bp CCGCCCTGTAGCCCCAGCCCCAGCGTGTCCAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGCACCGGGCGGTGCCGCTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PPCSPSPSVSRSSCR*RRIQSRTGRCRSSA
Trigger: GGCGGAGGAGCGGCACCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCAGGACGACCTGGACACGCTGGGGCTGGGGCTACAGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS GCA 90 bp GGGATGCCGCCCTGTAGCCCCAGCCCCAGCGTGTCCAGGTCGTCCTaGCGCTGCCGTAGGATCCAGTCCCGCACCGGGCGGTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GMPPCSPSPSVSRSS*RCRRIQSRTGRCRS
Trigger: GGAGCGGCACCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCAGGACGACCTGGACACGCTGGGGCTGGGGCTACAGGGCGGCATCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS GCA 90 bp TCCACTTCCCGCCGGAACCGCGGCCGGAGGATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGAGAGGAGCGTTGCCGCCACGCGGCC +
Preference number: 5 (lower is better)
Translates to: STSRRNRGRRMVRSG*RQDGSREERCRHAA
Trigger: GGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGGCGGGAAGTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
CDS CCA 90 bp CCGGAACCGCGGCCGGAGGATGGTCCGTTCAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTGCCGCCACGCGGCCACGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: PEPRPEDGPFRLPPG*VPRGALPPRGHDAL
Trigger: CAGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS CCA 90 bp CCGGAACCGCGGCCGGAGGATGGTCCGTTCAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTGCCGCCACGCGGCCACGATGCCCAG +
Preference number: 5 (lower is better)
Translates to: PEPRPEDGPFRLPPG*VPRGALPPRGHDAQ
Trigger: CTGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563651.5
CDS GCA 90 bp AGGTCGTCCTGCCGCTGCCGTAGGATCCAGTCCCGCACCGGGCGGTaGCGCTCCTCCGCCTTCAGGCCCTCCACGTGGGGTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RSSCRCRRIQSRTGR*RSSAFRPSTWGPRS
Trigger: ACTTCTGGGACCCCACGTGGAGGGCCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCAGGACGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS CCA 90 bp GGGTCCACCGGTAGCTCTCTGTCCGCGCGTCACAGCAGACGGGAGTaGCCGGCCAGGCAGAAAGAGGAGTGCGTGGCGCTGGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: GSTGSSLSARHSRRE*PARQKEECVALAAP
Trigger: GGGCGCTGCCAGCGCCACGCACTCCTCTTTCTGCCTGGCCGGCCACTCCCGTCTGCTGTGACGCGCGGACAGAGAGCTACCGGTGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS GCA 90 bp ATGGTCCGTTCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATGCCCAGCCGGGGTAGCAGCACTTCG +
Preference number: 5 (lower is better)
Translates to: MVRSGCRQDGSREER*RHAATMPSRGSSTS
Trigger: CGAAGTGCTGCTACCCCGGCTGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563651.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGTCCCGAGAGGAGCGTaGCCGCCACGCGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPVPRGA*PPRGHD
Trigger: ATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGAC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 90 bp ATGGTCCGTTCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATGCCCTGCGGGATGCTGCGGATGATG +
Preference number: 5 (lower is better)
Translates to: MVRSGCRQDGSREER*RHAATMPCGMLRMM
Trigger: CATCATCCGCAGCATCCCGCAGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS CCA 90 bp TCCCGCACCGGGCGGTGCCGCTCCTCCGCCTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGCACCTCAGCCACAGTCAACGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRTGRCRSSAFRPST*GPRSFCTSATVNGS
Trigger: GCTGCCGTTGACTGTGGCTGAGGTGCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS CCA 90 bp GACAGGCTGTCTTCTCCACTTCCCGCCGGAACCGCGGCCGGAGGATaGTCCGTTCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: DRLSSPLPAGTAAGG*SVQAAARMGPERSV
Trigger: AACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGGCGGGAAGTGGAGAAGACAGCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAACAGGGGTCGAGCCGTaGGCAAGGCCATGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPTGVEP*ARPWSV
Trigger: CACAGACCATGGCCTTGCCAACGGCTCGACCCCTGT...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCACAGGGGTCGAGCCGTaGGCAAGGCCATGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LSASSLGVERGPPVPAPGTGVEP*ARPWSV
Trigger: CACAGACCATGGCCTTGCCAACGGCTCGACCCCTGT...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGGGAGCAGGTCCACATaGGCCTTCGTGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPGSRST*AFVMRE
Trigger: CTCCCGCATCACGAAGGCCAATGTGGACCTGCTCCC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGGACGTCCAGCTGCCTaGGGTCACACGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPGRPAA*GHTCPG
Trigger: ACCTGGACACGTGTGACCCAAGGCAGCTGGACGTCC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 90 bp CATTCTTCTGTGCCAAGGCCACAGCCAGCTCCCGGACACGCTCCGTaGTCAGGCCGGACACCTCCGCACACGGGAAGCCAAGGAGTTGGC +
Preference number: 5 (lower is better)
Translates to: HSSVPRPQPAPGHAP*SGRTPPHTGSQGVG
Trigger: GCCAACTCCTTGGCTTCCCGTGTGCGGAGGTGTCCGGCCTGAGCACGGAGCGTGTCCGGGAGCTGGCTGTGGCCTTGGCACAGAAGAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
ENST00000569566.2
CDS-3UTR CAA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGGGAGCAGGTCCACATaGGCCTTCGTGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TEREFSWGGTGTTRACSWGSRST*AFVMRE
Trigger: CTCCCGCATCACGAAGGCCAATGTGGACCTGCTCCC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCCCGAGAGGAGCGTaGCCGCCACGCGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: ACSRLLSASSLGVERGPPVPRGA*PPRGHD
Trigger: ATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGAC...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 90 bp GGAGGGAGGCACCGTGGGTCCACCGGTAGCTCTCTGAGCCTCCTCTaGCTCGGTTTCCTCAATTGGGAAGTGGGGGTGGAGAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GGRHRGSTGSSLSLL*LGFLNWEVGVESLA
Trigger: TGCCAGGCTCTCCACCCCCACTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGAGAGCTACCGGTGGACCCACGGTGCCTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563941.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGTCCCGAGAGGAGCGTaGCCGCCACGCGGCCACGAT +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRVPRGA*PPRGHD
Trigger: ATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGAC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGATCTCGCGGGCCTTCTaGCCTGAAGGACAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TEREFSWGGTGTTRACSWISRAF*PEGQAV
Trigger: GACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGAT...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCGTGTCTAGGGTGTCTTaGTCTAGCTGGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LSASSLGVERGPPVPAPGVSRVS*SSWPLP
Trigger: GGGAAGGGGCCAGCTAGACAAAGACACCCTAGACAC...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCACCTCGGTTTCCTCAATaGGGAAGTGGGGGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPPRFPQ*GSGGGE
Trigger: CTCTCCACCCCCACTTCCCAATTGAGGAAACCGAGG...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCCTCGGTTTCCTCAATaGGGAAGTGGGGGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSASSLGVERGPPVPAPGPRFPQ*GSGGGE
Trigger: CTCTCCACCCCCACTTCCCAATTGAGGAAACCGAGG...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCAGAGAACGCATCTGGGTaGAGGAATAGCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EREFSWGGTGTTRACSWPENASG*RNSSRS
Trigger: GGACCTGCTGCTATTCCTCAACCCAGATGCGTTCTC...TGGCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGGTGTCTAGGGTGTCTTaGTCTAGCTGGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: TEREFSWGGTGTTRACSWVSRVS*SSWPLP
Trigger: GGGAAGGGGCCAGCTAGACAAAGACACCCTAGACAC...CCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGGACGTCCAGCTGCCTaGGGTCACACGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RLLSASSLGVERGPPVPAGRPAA*GHTCPG
Trigger: ACCTGGACACGTGTGACCCAAGGCAGCTGGACGTCC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS CCA 90 bp CTTTGTCTAGCTGGCCCCTTCCCTTCACAAAGCGGTCGATCAGGGTaGCCACCTGTGGGAGGGGCCGCCGAGGAGCCTGAGGACTCATTT +
Preference number: 5 (lower is better)
Translates to: LCLAGPFPSQSGRSG*PPVGGAAEEPEDSF
Trigger: AAATGAGTCCTCAGGCTCCTCGGCGGCCCCTCCCACAGGTGGCCACCCTGATCGACCGCTTTGTGAAGGGAAGGGGCCAGCTAGACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382862.7
CDS-3UTR CAA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGACAGGGGTCGAGCCGTaGGCAAGGCCATGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: CSRLLSASSLGVERGPPVTGVEP*ARPWSV
Trigger: CACAGACCATGGCCTTGCCAACGGCTCGACCCCTGT...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGGGAGCAGGTCCACATaGGCCTTCGTGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CSRLLSASSLGVERGPPVGSRST*AFVMRE
Trigger: CTCCCGCATCACGAAGGCCAATGTGGACCTGCTCCC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGAGCAGGTCCACATaGGCCTTCGTGATGCGGGAG +
Preference number: 5 (lower is better)
Translates to: LQGACSRLLSASSLGVERGSRST*AFVMRE
Trigger: CTCCCGCATCACGAAGGCCAATGTGGACCTGCTCCC...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCATCTCGCGGGCCTTCTaGCCTGAAGGACAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: FPFTEREFSWGGTGTTRAISRAF*PEGQAV
Trigger: GACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGAT...GGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGAGGCCTTCTGCGCAGTaGGGTAGGGAGCTTTACCCC +
Preference number: 5 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGRPSAQ*GRELYP
Trigger: GGGGTAAAGCTCCCTACCCAACTGCGCAGAAGGCCT...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS CCA 90 bp TCCACATTGGCCTTCGTGATGCGGGAGAAGAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCTGGGTTGAGGAATAGCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: STLAFVMREKKRVQA*GPENASGLRNSSRS
Trigger: GGACCTGCTGCTATTCCTCAACCCAGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTTCTTCTCCCGCATCACGAAGGCCAATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
ENST00000569566.2
CDS-3UTR CAA 90 bp CGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTGTGTCTAGGGTGTCTTaGTCTAGCTGGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLLSASSLGVERGPPVPAVSRVS*SSWPLP
Trigger: GGGAAGGGGCCAGCTAGACAAAGACACCCTAGACAC...AGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGACGTCCAGCTGCCTaGGGTCACACGTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRGRPAA*GHTCPG
Trigger: ACCTGGACACGTGTGACCCAAGGCAGCTGGACGTCC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS TCA 90 bp GTCCGCAGCTTCATGAACGTGGCCAAGTCCATGCTCACATTCTGCTaGCTGAGCGCCTTCAAATCCTCCGTGGGGGCCCCACCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VRSFMNVAKSMLTFC*LSAFKSSVGAPPRK
Trigger: CTTCCTGGGTGGGGCCCCCACGGAGGATTTGAAGGCGCTCAGTCAGCAGAATGTGAGCATGGACTTGGCCACGTTCATGAAGCTGCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTATCTCGCGGGCCTTCTaGCCTGAAGGACAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRISRAF*PEGQAV
Trigger: GACAGCCTGTCCTTCAGGCAAGAAGGCCCGCGAGAT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTAGACTCGGGGTAACCTaGTGGGTAGAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SRLLSASSLGVERGPPVPRLGVT*WVELIQ
Trigger: CTGGATGAGCTCTACCCACAAGGTTACCCCGAGTCT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGACGTCACATTCCACTaGCGAATGTCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SRLLSASSLGVERGPPVPDVTFH*RMSSGL
Trigger: GAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTC...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGGACGTCACATTCCACTaGCGAATGTCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: AGGMFPFTEREFSWGGTGDVTFH*RMSSGL
Trigger: GAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTC...CCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTGGCCTCATTTCGTGCCCTTaGTTGACTTCAAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSASSLGVERGPPVPAPGLISCP*LTSSKA
Trigger: GGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAG...GCCAGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS TCA 90 bp AGAGCTCATCCAGTTTATGCTTTAGGACGTCCAGCTGCTCGTAGGTaGAGGGGATGGCGTTCACGCGGTCCATCTGGGTGGCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RAHPVYALGRPAARR*RGWRSRGPSGWPAG
Trigger: CCCTGCTGGCCACCCAGATGGACCGCGTGAACGCCATCCCCTTCACCTACGAGCAGCTGGACGTCCTAAAGCATAAACTGGATGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563651.5
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 90 bp GGAGGGGCCGCCGAGGAGCCTGAGGACTCATTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCAGGGTCTCCAGGGACGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: GGAAEEPEDSFRALC*LQAKPSGSPGTSHS
Trigger: GGAATGTGACGTCCCTGGAGACCCTGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAGTCCTCAGGCTCCTCGGCGGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382862.7
CDS-3UTR CAA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGAGAACGCATCTGGGTaGAGGAATAGCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTENASG*RNSSRS
Trigger: GGACCTGCTGCTATTCCTCAACCCAGATGCGTTCTC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCAGACTCGGGGTAACCTaGTGGGTAGAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: ACSRLLSASSLGVERGPPRLGVT*WVELIQ
Trigger: CTGGATGAGCTCTACCCACAAGGTTACCCCGAGTCT...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp CTGCAGGGGGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGAGACTCGGGGTAACCTaGTGGGTAGAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LQGACSRLLSASSLGVERRLGVT*WVELIQ
Trigger: CTGGATGAGCTCTACCCACAAGGTTACCCCGAGTCT...CCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCCCCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGGACGTCACATTCCACTaGCGAATGTCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: CSRLLSASSLGVERGPPVDVTFH*RMSSGL
Trigger: GAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTC...CACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GGCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCGACGTCACATTCCACTaGCGAATGTCCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: GMFPFTEREFSWGGTGTTDVTFH*RMSSGL
Trigger: GAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTC...GGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGTGTCTAGGGTGTCTTaGTCTAGCTGGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRVSRVS*SSWPLP
Trigger: GGGAAGGGGCCAGCTAGACAAAGACACCCTAGACAC...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTAGACTCGGGGTAACCTaGTGGGTAGAGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRRLGVT*WVELIQ
Trigger: CTGGATGAGCTCTACCCACAAGGTTACCCCGAGTCT...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS TCA 90 bp CCAGGGACGTCACATTCCACTTGCGAATGTCCTCAGGGCTCATCTTaGGGAAGAGGTAGCCCAGGTGCTGGATCACAGACTCGGGGTAAC +
Preference number: 5 (lower is better)
Translates to: PGTSHSTCECPQGSS*GRGSPGAGSQTRGN
Trigger: GTTACCCCGAGTCTGTGATCCAGCACCTGGGCTACCTCTTCCTCAAGATGAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS-3UTR CAA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTCTCATTTCGTGCCCTTaGTTGACTTCAAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LLSASSLGVERGPPVPAPLISCP*LTSSKA
Trigger: GGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAG...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS TCA 90 bp GGTCGATCAGGGTGGCCACCTGAGGACTCATTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCAGGGTCTCCAGGGACGTCACATTCC +
Preference number: 5 (lower is better)
Translates to: GRSGWPPEDSFRALC*LQAKPSGSPGTSHS
Trigger: GGAATGTGACGTCCCTGGAGACCCTGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAGTCCTCAGGTGGCCACCCTGATCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS-3UTR CAA 90 bp TCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTATTTCGTGCCCTTTGTaGACTTCAAGCAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SRLLSASSLGVERGPPVPISCPL*TSSKAF
Trigger: GAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAAT...AGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCTATTTCGTGCCCTTTGTaGACTTCAAGCAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLSASSLGVERGPPVPAPISCPL*TSSKAF
Trigger: GAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAAT...AGGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp TTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTGCCTGCTCCATTTCGTGCCCTTTGTaGACTTCAAGCAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: FTEREFSWGGTGTTRACSISCPL*TSSKAF
Trigger: GAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAAT...GGAGCAGGCACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp GCATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCATTTCGTGCCCTTTGTaGACTTCAAGCAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: ACSRLLSASSLGVERGPPISCPL*TSSKAF
Trigger: GAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAAT...GGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS-3UTR CAA 90 bp ATGTTCCCGTTTACTGAGCGCGAGTTCTCTTGGGGTGGAACGGGGACCACCCGTCTCATTTCGTGCCCTTaGTTGACTTCAAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: MFPFTEREFSWGGTGTTRLISCP*LTSSKA
Trigger: GGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAG...ACGGGTGGTCCCCGTTCCACCCCAAGAGAACTCGCGCTCAGTAAACGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 72 bp AGCCCCAGCCCCAGCGTGTCCAGGTCGTCCTGCCGCTaGCGTAGGATCCAGTCCCGCACCGGGCGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: SPSPSVSRSSCR*RRIQSRTGRCR
Trigger: GCGGCACCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCAGGACGACCTGGACACGCTGGGGCTGGGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS GCA 72 bp CGCCGGAACCGCGGCCGGAGGATGGTCCGTTCAGGCTaGCGCCAGGATGGGTCCCGAGAGGAGCGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: RRNRGRRMVRSG*RQDGSREERCR
Trigger: GCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
CDS GCA 72 bp TGCCGCTGCCGTAGGATCCAGTCCCGCACCGGGCGGTaGCGCTCCTCCGCCTTCAGGCCCTCCACGTGGGGT +
Preference number: 6 (lower is better)
Translates to: CRCRRIQSRTGR*RSSAFRPSTWG
Trigger: ACCCCACGTGGAGGGCCTGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS GCA 72 bp CCCTGTAGCCCCAGCCCCAGCGTGTCCAGGTCGTCCTaGCGCTGCCGTAGGATCCAGTCCCGCACCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PCSPSPSVSRSS*RCRRIQSRTGR
Trigger: CCGCCCGGTGCGGGACTGGATCCTACGGCAGCGGCAGGACGACCTGGACACGCTGGGGCTGGGGCTACAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS CCA 72 bp CGGCCGGAGGATGGTCCGTTCAGGCTGCCGCCAGGATaGGTCCCGAGAGGAGCGTTGCCGCCACGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: RPEDGPFRLPPG*VPRGALPPRGH
Trigger: GTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
CDS GCA 72 bp TCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTTaGCGCCACGCGGCCACGATGCCCTGCGGGATGCTG +
Preference number: 6 (lower is better)
Translates to: SGCRQDGSREER*RHAATMPCGML
Trigger: CAGCATCCCGCAGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS CAA 72 bp TTCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTaGCCGCCACGCGGCCACGATGCCCTGCGGGATGCT +
Preference number: 6 (lower is better)
Translates to: FRLPPGWVPRGA*PPRGHDALRDA
Trigger: AGCATCCCGCAGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS CAA 90 bp GATGGTCCGTTCAGGCTGCCGCCAGGATGGGTCCCGAGAGGAGCGTaGCCGCCACGCGGCCACGATGCCCTGCGGGATGCTGCGGATGAT +
Preference number: 6 (lower is better)
Translates to: DGPFRLPPGWVPRGA*PPRGHDALRDAADD
Trigger: ATCATCCGCAGCATCCCGCAGGGCATCGTGGCCGCGTGGCGGCAACGCTCCTCTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563941.5
ENST00000566549.5
CDS GCA 72 bp GTGCCAAGGCCACAGCCAGCTCCCGGACACGCTCCGTaGTCAGGCCGGACACCTCCGCACACGGGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: VPRPQPAPGHAP*SGRTPPHTGSQ
Trigger: TTGGCTTCCCGTGTGCGGAGGTGTCCGGCCTGAGCACGGAGCGTGTCCGGGAGCTGGCTGTGGCCTTGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
ENST00000569566.2
CDS CCA 72 bp TCTTCTCCACTTCCCGCCGGAACCGCGGCCGGAGGATaGTCCGTTCAGGCTGCCGCCAGGATGGGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: SSPLPAGTAAGG*SVQAAARMGPE
Trigger: CTCGGGACCCATCCTGGCGGCAGCCTGAACGGACCATCCTCCGGCCGCGGTTCCGGCGGGAAGTGGAGAAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
CDS CCA 72 bp GGGCGGTGCCGCTCCTCCGCCTTCAGGCCCTCCACGTaGGGTCCCAGAAGTTTCTGCACCTCAGCCACAGTC +
Preference number: 6 (lower is better)
Translates to: GRCRSSAFRPST*GPRSFCTSATV
Trigger: GACTGTGGCTGAGGTGCAGAAACTTCTGGGACCCCACGTGGAGGGCCTGAAGGCGGAGGAGCGGCACCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS GCA 72 bp AGCAGACGGGAGTGGCCGGCCAGGCAGAAAGAGGAGTaGGTGGCGCTGAGCCTCCTCTGCCTCGGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRREWPARQKEE*VALSLLCLGFL
Trigger: GAGGAAACCGAGGCAGAGGAGGCTCAGCGCCACGCACTCCTCTTTCTGCCTGGCCGGCCACTCCCGTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS CCA 72 bp AAGGCGGGCCTTGGGATAGAGGACGTCCAGCTGCCTTaGGTCACACGTGTCCAGGTCCTGGGGCCTGACCGC +
Preference number: 6 (lower is better)
Translates to: KAGLGIEDVQLP*VTRVQVLGPDR
Trigger: GCGGTCAGGCCCCAGGACCTGGACACGTGTGACCCAAGGCAGCTGGACGTCCTCTATCCCAAGGCCCGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS CAA 90 bp AGAGGAGTGCGTGGCGCTGAGCCTCCTCTGCCTCGGTTTCCTCAATaGGGAAGTGGGGGTGGAGAGCCTGGCAGCCTCCCGGGCCGTCAA +
Preference number: 6 (lower is better)
Translates to: RGVRGAEPPLPRFPQ*GSGGGEPGSLPGRQ
Trigger: TTGACGGCCCGGGAGGCTGCCAGGCTCTCCACCCCCACTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGCGCCACGCACTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS TCA 72 bp AGTGGCCGGCCAGGCAGAAAGAGGAGTGCGTGGCGCTaGGCCTCCTCTGCCTCGGTTTCCTCAATTGGGAAG +
Preference number: 6 (lower is better)
Translates to: SGRPGRKRSAWR*ASSASVSSIGK
Trigger: CTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGCGCCACGCACTCCTCTTTCTGCCTGGCCGGCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS TCA 72 bp AGGGAGGGAGGCACCGTGGGTCCACCGGTAGCTCTCTaGGCCTCCTCTGCCTCGGTTTCCTCAATTGGGAAG +
Preference number: 6 (lower is better)
Translates to: REGGTVGPPVAL*ASSASVSSIGK
Trigger: CTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGAGAGCTACCGGTGGACCCACGGTGCCTCCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563941.5
CDS GCA 72 bp CACCGTGGGTCCACCGGTAGCTCTCTGAGCCTCCTCTaGCTCGGTTTCCTCAATTGGGAAGTGGGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: HRGSTGSSLSLL*LGFLNWEVGVE
Trigger: CTCCACCCCCACTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGAGAGCTACCGGTGGACCCACGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563941.5
CDS CCA 72 bp AGGCCGGACACCTCCGCACACGGGAAGCCAAGGAGTTaGCGAGGGGAGAGGCTGGAAATGTTAGGTGGGTTG +
Preference number: 6 (lower is better)
Translates to: RPDTSAHGKPRS*RGERLEMLGGL
Trigger: CAACCCACCTAACATTTCCAGCCTCTCCCCTCGCCAACTCCTTGGCTTCCCGTGTGCGGAGGTGTCCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
ENST00000569566.2
CDS CCA 72 bp GCCTTCGTGATGCGGGAGAAGAAACGGGTGCAGGCCTaGGGCCCCGAGAACGCATCTGGGTTGAGGAATAGC +
Preference number: 6 (lower is better)
Translates to: AFVMREKKRVQA*GPENASGLRNS
Trigger: GCTATTCCTCAACCCAGATGCGTTCTCGGGGCCCCAGGCCTGCACCCGTTTCTTCTCCCGCATCACGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000563651.5
ENST00000563941.5
ENST00000566549.5
ENST00000569566.2
CDS GCA 72 bp AGGCAGAAAGAGGAGTGCGTGGCGCTGAGCCTCCTCTaGCTCGGTTTCCTCAATTGGGAAGTGGGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: RQKEECVALSLL*LGFLNWEVGVE
Trigger: CTCCACCCCCACTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGCGCCACGCACTCCTCTTTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS CCA 72 bp TCGGTTTCCTCAATTGGGAAGTGGGGGTGGAGAGCCTaGCAGCCTCCCGGGCCGTCAAAGGGAACAAATGAC +
Preference number: 6 (lower is better)
Translates to: SVSSIGKWGWRA*QPPGPSKGTND
Trigger: GTCATTTGTTCCCTTTGACGGCCCGGGAGGCTGCCAGGCTCTCCACCCCCACTTCCCAATTGAGGAAACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545450.7
CDS TCA 72 bp CCACGCAGGCTTCCAGCTCCCACTTCTTGTAGAAGATaGGGCTCTCGTCTATCTCGCGGGCCTTCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: PRRLPAPTSCRR*GSRLSRGPSCL
Trigger: CAGGCAAGAAGGCCCGCGAGATAGACGAGAGCCTCATCTTCTACAAGAAGTGGGAGCTGGAAGCCTGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563651.5
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp CCAGTTTATGCTTTAGGACGTCCAGCTGCTCGTAGGTaGAGGGGATGGCGTTCACGCGGTCCATCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: PVYALGRPAARR*RGWRSRGPSGW
Trigger: CCACCCAGATGGACCGCGTGAACGCCATCCCCTTCACCTACGAGCAGCTGGACGTCCTAAAGCATAAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563651.5
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp CAGTCAACGGCAGCACCGCATCCGTCCGCAGCTTCATaGACGTGGCCAAGTCCATGCTCACATTCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: QSTAAPHPSAAS*TWPSPCSHSAD
Trigger: GTCAGCAGAATGTGAGCATGGACTTGGCCACGTTCATGAAGCTGCGGACGGATGCGGTGCTGCCGTTGACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS CCA 72 bp AAGGCGGTCAGGGTGTCTAGGGTGTCTTTGTCTAGCTaGCCCCTTCCCTTCACAAAGCGGTCGATCAGGGTG +
Preference number: 6 (lower is better)
Translates to: KAVRVSRVSLSS*PLPFTKRSIRV
Trigger: CACCCTGATCGACCGCTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACACCCTAGACACCCTGACCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp GCCGAGGAGCCTGAGGACTCATTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCAGGGTCTCCAGGGACG +
Preference number: 6 (lower is better)
Translates to: AEEPEDSFRALC*LQAKPSGSPGT
Trigger: CGTCCCTGGAGACCCTGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAGTCCTCAGGCTCCTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382862.7
CDS TCA 72 bp TTCATGAACGTGGCCAAGTCCATGCTCACATTCTGCTaGCTGAGCGCCTTCAAATCCTCCGTGGGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: FMNVAKSMLTFC*LSAFKSSVGAP
Trigger: TGGGGCCCCCACGGAGGATTTGAAGGCGCTCAGTCAGCAGAATGTGAGCATGGACTTGGCCACGTTCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp GGGTGGCCACCTGAGGACTCATTTCGTGCCCTTTGTTaGCTTCAAGCAAAGCCTTCAGGGTCTCCAGGGACG +
Preference number: 6 (lower is better)
Translates to: GWPPEDSFRALC*LQAKPSGSPGT
Trigger: CGTCCCTGGAGACCCTGAAGGCTTTGCTTGAAGTCAACAAAGGGCACGAAATGAGTCCTCAGGTGGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp AGGGTAACTCTGATGTGCAGGGTGATTGGCCACACCTaGGCCTCCTCTGCCTCGGTTTCCTCAATTGGGAAG +
Preference number: 6 (lower is better)
Translates to: RVTLMCRVIGHT*ASSASVSSIGK
Trigger: CTTCCCAATTGAGGAAACCGAGGCAGAGGAGGCTCAGGTGTGGCCAATCACCCTGCACATCAGAGTTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566549.5
CDS CAA 72 bp AAAGCCTTCAGGGTCTCCAGGGACGTCACATTCCACTaGCGAATGTCCTCAGGGCTCATCTTGAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: KAFRVSRDVTFH*RMSSGLILRKR
Trigger: CCTCTTCCTCAAGATGAGCCCTGAGGACATTCGCAAGTGGAATGTGACGTCCCTGGAGACCCTGAAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5
CDS TCA 72 bp TCACATTCCACTTGCGAATGTCCTCAGGGCTCATCTTaGGGAAGAGGTAGCCCAGGTGCTGGATCACAGACT +
Preference number: 6 (lower is better)
Translates to: SHSTCECPQGSS*GRGSPGAGSQT
Trigger: AGTCTGTGATCCAGCACCTGGGCTACCTCTTCCTCAAGATGAGCCCTGAGGACATTCGCAAGTGGAATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000382862.7
ENST00000545450.7
ENST00000561896.1
ENST00000563651.5
ENST00000563941.5
ENST00000566269.6
ENST00000566549.5