Pregenerated sensors for MSI1 (Homo sapiens)
Ensembl gene IDs: ENSG00000135097Ensembl transcript IDs: ENST00000257552.7, ENST00000546622.1, ENST00000546985.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCGGCTGCGGCTGAGGTCTCCCGCCCCCTCGCTGGCTCACTCGTaGTCCTCAGTCAGCTGCAGGCTGGGGCGCTCCTGCCACCGTCCC | + |
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Preference number: 1 (lower is better) Translates to: RRLRLRSPAPSLAHS*SSVSCRLGRSCHRP Trigger: GGGACGGTGGCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCACGAGTGAGCCAGCGAGGGGGCGGGAGACCTCAGCCGCAGCCGCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR GCA 90 bp | TGTCCAGCAGTGTCGCTGGGCAAGCCCTGCTCTTCCCACGCCCTTTaGCCCCACACTGGGTTTTTGGAGTGGGCAGGTCCAACCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: CPAVSLGKPCSSHAL*PHTGFLEWAGPTKA Trigger: GGCCTTGGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGACACTGCTGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR CCA 90 bp | GTCGCTGGGCAAGCCCTGCTCTTCCCACGCCCTTTGCCCCCACACTaGGTTTTTGGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VAGQALLFPRPLPPH*VFGVGRSNQGLDPE Trigger: CTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCAGTCAGCTGCAGGCTaGGGCGCTCCTGCCACCGTC | + |
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Preference number: 2 (lower is better) Translates to: GVGRSNQGLDPEGLRERAQSAAG*GAPATV Trigger: GACGGTGGCAGGAGCGCCCCAGCCTGCAGCTGACTG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCGATGGACCAGAGGGCTaGGGTGGGCAACCGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: GVGRSNQGLDPEGLRERADGPEG*GGQPAN Trigger: ATTAGCCGGTTGCCCACCCCAGCCCTCTGGTCCATC...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR CAA 90 bp | CTGTCCAGCAGTGTCGCTGGGCAAGCCCTGCTCTTCCCACGCCCTTaGCCCCCACACTGGGTTTTTGGAGTGGGCAGGTCCAACCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSSSVAGQALLFPRP*PPHWVFGVGRSNQG Trigger: GCCTTGGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGACACTGCTGGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCGGGCCCGGGGAGTTaGGGGCAGGCAGTAGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPGPGS*GQAVAG Trigger: ACCCGCTACTGCCTGCCCCCAACTCCCCGGGCCCGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCTCCCGCCCCCTCGCTaGCTCACTCGTGGTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLPPPR*LTRGPQ Trigger: CTGAGGACCACGAGTGAGCCAGCGAGGGGGCGGGAG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCACAGTATTTACATATaGTACAGGACGGGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GVGRSNQGLDPEGLRERAHSIYI*YRTGWF Trigger: GAACCATCCCGTCCTGTATCATATGTAAATACTGTG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTGGTCCTCAGTCAGCTaGAGGCTGGGGCGCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPWSSVS*RLGRSC Trigger: GCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTCGCTGGCTCACTCGTaGTCCTCAGTCAGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPSLAHS*SSVSCR Trigger: CCTGCAGCTGACTGAGGACCACGAGTGAGCCAGCGA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTTGTTCTCAGCTGGTaGGGGGCACCTGGCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPFVLSW*GAPGPL Trigger: CAAGGGGCCAGGTGCCCCCCACCAGCTGAGAACAAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTGCCCCCTGCGGCCTaGGGCTTCACATTCACAAAC | + |
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Preference number: 2 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLPPAA*GFTFTN Trigger: GTTTGTGAATGTGAAGCCCCAGGCCGCAGGGGGCAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCGGGAGCCAGACGCTGTaGGGGGCAGCAGGGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GVGRSNQGLDPEGLRERAGSQTL*GAAGQG Trigger: CCCCTGCCCTGCTGCCCCCAACAGCGTCTGGCTCCC...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR TCA 72 bp | TGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTaGGAGAGCGGGCCTGCCGTGGCCACAGCTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: WAGPTKALTLRA*ESGPAVATAEA Trigger: GGCCTCAGCTGTGGCCACGGCAGGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR GCA 72 bp | GTGTCGCTGGGCAAGCCCTGCTCTTCCCACGCCCTTTaGCCCCACACTGGGTTTTTGGAGTGGGCAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VSLGKPCSSHAL*PHTGFLEWAGP Trigger: TGGACCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGACAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR GCA 72 bp | GTTAATTCCTGTCCAGCAGTGTCGCTGGGCAAGCCCTaGTCTTCCCACGCCCTTTGCCCCCACACTGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: VNSCPAVSLGKP*SSHALCPHTGF Trigger: AAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGACACTGCTGGACAGGAATTAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR TCA 72 bp | AGAGGGGTGGGCACATCACCTCACAGTATTTACATATaGTACAGGACGGGATGGTTCCAGGGGCTCGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RGVGTSPHSIYI*YRTGWFQGLGL Trigger: CAGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGTGATGTGCCCACCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCGTAGAGCTCGGCCATaGGGCCGGGGCTGGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERARRARP*GRGWWS Trigger: GGACCACCAGCCCCGGCCCCATGGCCGAGCTCTACG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCCCCCGAGTCCTGGTTaGCCGCCCCGTAGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAPPSPG*PPRRAR Trigger: CCGAGCTCTACGGGGCGGCCAACCAGGACTCGGGGG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCAGACCTCCCCCGGGCTaGGCCCGTTGGCGACATCAC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERARPPPG*ARWRHH Trigger: GTGATGTCGCCAACGGGCTCAGCCCGGGGGAGGTCT...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCAGCCCCCTGTGCGGCTaGGAGTCGAACCTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERASPLCG*ESNLEG Trigger: CCCCTCCAGGTTCGACTCCCAGCCGCACAGGGGGCT...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCTCCCGCCCCCTCGCTaGCTCACTCGTGGTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERALPPPR*LTRGPQ Trigger: CTGAGGACCACGAGTGAGCCAGCGAGGGGGCGGGAG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCAGAGCGGGCCTGCCGTaGCCACAGCTGAGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERARAGLP*PQLRPA Trigger: TGCAGGCCTCAGCTGTGGCCACGGCAGGCCCGCTCT...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCACCATCTTGGGCTGTaGTCGCCGAGGGAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAHHLGL*SPREGH Trigger: GTGGCCTTCCCTCGGCGAGCACAGCCCAAGATGGTG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCTCGCTGGGCAAGCCCTaGTCTTCCCACGCCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERASLGKP*SSHALC Trigger: GCAAAGGGCGTGGGAAGAGCAGGGCTTGCCCAGCGA...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCGTCCAGCAGTGTCGCTaGGCAAGCCCTGCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAVQQCR*ASPALP Trigger: GGGAAGAGCAGGGCTTGCCCAGCGACACTGCTGGAC...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCTTGGAGTCGAGCTCGTaGCGCGATTGCGCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERALESSS*RDCAST Trigger: AGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAA...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCCTGCCACCGTCCCCTaGTTCAGTGGTACCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAPATVP*FSGTHW Trigger: CCAATGGGTACCACTGAAGCAGGGGACGGTGGCAGG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCGGAAGGGGGACAGACTaGGCAGAAACCATGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAGRGTD*AETMKP Trigger: GGGCTTCATGGTTTCTGCTCAGTCTGTCCCCCTTCC...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCTTGCCCCCTGCGGCCTaGGGCTTCACATTCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERALPPAA*GFTFTN Trigger: GTTTGTGAATGTGAAGCCCCAGGCCGCAGGGGGCAA...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCCCACACTGGGTTTTTaGAGTGGGCAGGTCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERAPTLGF*SGQVQP Trigger: TGGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCTGTGGCTTGGAAACCTaGGTAACCCAGCATGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERACGLET*VTQHAD Trigger: ATCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACA...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTGTGGCCGAAGCCGGTaGTGGGGGCAGGGCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFCGRSR*WGQGWR Trigger: CCGCCAGCCCTGCCCCCAGCACCGGCTTCGGCCACA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| 3UTR CAA 72 bp | TGCTCTTCCCACGCCCTTTGCCCCCACACTGGGTTTTaGGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: CSSHALCPHTGF*EWAGPTKALTL Trigger: CAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTAGCCGCTGCCGCCGCTaGCGCCGCCATTGGTCCGTA | + |
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Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSRCRR*RRHWSV Trigger: TACGGACCAATGGCGGCGGCAGCGGCGGCAGCGGCT...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGAGGCGAGGCCGGGCTaGGGCGCGTCAGTCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPEARPG*GASVSI Trigger: GATGGAGACTGACGCGCCCCAGCCCGGCCTCGCCTC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGGGCCCCCAAGACTGTaGCCGAAGCCGGTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPGPPRL*PKPVLG Trigger: CCCCAGCACCGGCTTCGGCCACAGTCTTGGGGGCCC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCAGCAGGGGAGACCTTTaGAGAGTTAATTCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVGRSNQGLDPEGLRERASRGDL*RVNSCP Trigger: TGGACAGGAATTAACTCTCCAAAGGTCTCCCCTGCT...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTGACCCTGAGGGCCTaGGAGAGCGGGCCTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLTLRA*ESGPAV Trigger: CACGGCAGGCCCGCTCTCTCAGGCCCTCAGGGTCAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTAGGCTGGGGCGCTCCTaGCACCGTCCCCTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPRLGRS*HRPLLQ Trigger: CTGAAGCAGGGGACGGTGGCAGGAGCGCCCCAGCCT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCAGTCAGCTGCAGGCTaGGGCGCTCCTGCCACCGTC | + |
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Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFQSAAG*GAPATV Trigger: GACGGTGGCAGGAGCGCCCCAGCCTGCAGCTGACTG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCGCCAGAGCGTCCCCTaGTGCCCACTCATTGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFRQSVP*CPLIAG Trigger: CCCCGCAATGAGTGGGCACCAGGGGACGCTCTGGCG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCATTCCGTAGGGCATaGCTCGAGACCTCCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPFRRA*LETSPG Trigger: CCCGGGGGAGGTCTCGAGTCATGCCCTACGGAATGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGCCATCGTCCAGGGGTaGGAGCCTGTCCCTCGAACC | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPAIVQG*EPVPRT Trigger: GGTTCGAGGGACAGGCTCTCACCCCTGGACGATGGC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCAGGAAGCCCCCTGTaGGGCTGGGAGTCGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPGSPL*GWESNL Trigger: CAGGTTCGACTCCCAGCCGCACAGGGGGCTTCCTGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTGGTCCTCAGTCAGCTaGAGGCTGGGGCGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFWSSVS*RLGRSC Trigger: GCAGGAGCGCCCCAGCCTGCAGCTGACTGAGGACCA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCAGAGCGTCCCCTGGTaGCCACTCATTGCGGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFQSVPW*PLIAGV Trigger: GACCCCCGCAATGAGTGGGCACCAGGGGACGCTCTG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCGCTGCCGCCGCCATTaGTCCGTAGGCAGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPRCRRH*SVGSER Trigger: CCTCTCACTGCCTACGGACCAATGGCGGCGGCAGCG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTCACGTCCTCCACCGTaGTGTTCACCGACAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSRPPP*CSPTAP Trigger: GGGGGCTGTCGGTGAACACCACGGTGGAGGACGTGA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGCTGGGAGTCGAACCTaGAGGGGGAGCCATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPAGSRT*RGSHRP Trigger: TGGACGATGGCTCCCCCTCCAGGTTCGACTCCCAGC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTGCCGATGCCCAGCATaGAGGCGTCCATTCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPCRCPA*RRPFRR Trigger: CCTACGGAATGGACGCCTTCATGCTGGGCATCGGCA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTGCCGTGGCCACAGCTaGGGCCTGCAAGCTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFCRGHS*GLQAYS Trigger: ACTGTAAGCTTGCAGGCCTCAGCTGTGGCCACGGCA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTCGCTGGCTCACTCGTaGTCCTCAGTCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSLAHS*SSVSCR Trigger: CCTGCAGCTGACTGAGGACCACGAGTGAGCCAGCGA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTTTGTTCTCAGCTGGTaGGGGGCACCTGGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFFVLSW*GAPGPL Trigger: CAAGGGGCCAGGTGCCCCCCACCAGCTGAGAACAAA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCCTTCCTGCGTAGTCTaGCAACTGAGTCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFPSCVV*QLSPPM Trigger: CATCGGGGGACTCAGTTGGCAGACTACGCAGGAAGG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSSCRD*ASTLST Trigger: GGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCT...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPFTSPN*PKYSRS Trigger: GCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTAACCCCTGGATCTCTTaGTCAGGGGGTCCCGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFNPWIS*SGGPAS Trigger: TGATGCGGGACCCCCTGACCAAGAGATCCAGGGGTT...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCGAAGCCGAAACCCCTaGATCTCTTGGTCAGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFRSRNP*ISWSGG Trigger: ACCCCCTGACCAAGAGATCCAGGGGTTTCGGCTTCG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTCGAGTCACCATCTTaGGCTGTGCTCGCCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPFESPS*AVLAEG Trigger: TCCCTCGGCGAGCACAGCCCAAGATGGTGACTCGAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCTTTGCCCCCACACTaGGTTTTTGGAGTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPLPPH*VFGVGR Trigger: CCTGCCCACTCCAAAAACCCAGTGTGGGGGCAAAGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCTCACTCTCAAACGTaGCAAACCCGAACCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPHSQT*QTRTLG Trigger: ACCGAGGGTTCGGGTTTGTCACGTTTGAGAGTGAGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTAACCCGAACCCTCGGTaGCGGTTGGTGGTTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFNPNPR*RLVVLS Trigger: TGACAAAACCACCAACCGGCACCGAGGGTTCGGGTT...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTGCCACAGCTGAGGCCTaGAAGCTTACAGTAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFATAEA*KLTVTV Trigger: CACCGTTACTGTAAGCTTGCAGGCCTCAGCTGTGGC...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTCTTCCCACGCCCTTTaGCCCCACACTGGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPSSHAL*PHTGFL Trigger: CAAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGGCTGGCGTAGGTTGTaGCTTGGAAACCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPGWRRL*LGNLGN Trigger: GTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCGTCCCCTGCTTCAGTaGTACCCATTGGTGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFRPLLQ*YPLVKA Trigger: AGCCTTCACCAATGGGTACCACTGAAGCAGGGGACG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTAACTCTCCAAAGGTaGGGTTTCCGGGTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLTLQR*GFRVGA Trigger: TGCCCCCACCCGGAAACCCCACCTTTGGAGAGTTAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTACAGTAACGGTGTCTaGGGGGACAGAAACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFYSNGV*GDRNRG Trigger: TCCCCTGTTTCTGTCCCCTCAGACACCGTTACTGTA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTACTGAGCAGAAACCATaGAGCCCCAACCTAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPTEQKP*SPNLGR Trigger: CCTACCTAGGTTGGGGCTTCATGGTTTCTGCTCAGT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLSTPA*SMKVTK Trigger: CTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAA...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCTGTATAACTCCGGCTaGCGTAGGTTGTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPLYNSG*RRLWLG Trigger: TCCAAGCCACAACCTACGCCAGCCGGAGTTATACAG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTGGTCTTAGAGAGGGGTaGGCACATCACCTCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFGLREG*AHHLTV Trigger: TACTGTGAGGTGATGTGCCCACCCCTCTCTAAGACC...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTAGTGGTACCCATTGGTaGAGGCTGTGGCAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSGTHW*RLWQSK Trigger: CTTTGATTGCCACAGCCTTCACCAATGGGTACCACT...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTACCCTCGGTGCCGGTTaGTGGTTTTGTCAAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPTLGAG*WFCQTS Trigger: TGATGTTTGACAAAACCACCAACCGGCACCGAGGGT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR TCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTATCACCTCCTTTGGCTaGGCTTTCTTACATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPITSFG*AFLHST Trigger: GGTGGAATGTAAGAAAGCTCAGCCAAAGGAGGTGAT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR GCA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTAACTGCTCAAAATATTaGTTCACGTCCTCCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSQYLHMIQDGMVPGARPNCSKY*FTSSTV Trigger: CACGGTGGAGGACGTGAAGCAATATTTTGAGCAGTT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS GCA 90 bp | CCAGGGGTGAGAGCCTGTCCCTCGAACCACAGCCGCTGCCGCCGCTaGCGCCGCCATTGGTCCGTAGGCAGTGAGAGGAATGGCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGVRACPSNHSRCRR*RRHWSVGSERNGGE Trigger: TTCCCCGCCATTCCTCTCACTGCCTACGGACCAATGGCGGCGGCAGCGGCGGCAGCGGCTGTGGTTCGAGGGACAGGCTCTCACCCCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546985.1 |
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| CDS GCA 90 bp | CCAGGGGTGAGAGCCTGTCCCTCGAACCACAGCCGCTGCCGCCGCTaGCGCCGCCATTGGTCCGTAGGCAGTGAGAGGAATGGCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGVRACPSNHSRCRR*RRHWSVGSERNGCK Trigger: CTTACAGCCATTCCTCTCACTGCCTACGGACCAATGGCGGCGGCAGCGGCGGCAGCGGCTGTGGTTCGAGGGACAGGCTCTCACCCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCCCCACACTGGGTTTTaGGAGTGGGCAGGTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GVGRSNQGLDPEGLRERAPHTGF*EWAGPT Trigger: GGTTGGACCTGCCCACTCCAAAAACCCAGTGTGGGG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCCTCTTCCCACGCCCTTaGCCCCCACACTGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVGRSNQGLDPEGLRERALFPRP*PPHWVF Trigger: AAAAACCCAGTGTGGGGGCAAAGGGCGTGGGAAGAG...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CCA 90 bp | GTCAGGGGGTCCCGCATCACCAGACACTCCTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGCCCTTCCTGCGTAGTCTGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VRGSRITRHSFTSPN*PKYSRSPSCVVCQL Trigger: CAGTTGGCAGACTACGCAGGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAGGAGTGTCTGGTGATGCGGGACCCCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCTTAGGGTCAATTGTTTaGGAGTCGAGCTCGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGRSNQGLDPEGLRERALGSIV*ESSSCR Trigger: GCGGCACGAGCTCGACTCCAAAACAATTGACCCTAA...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GGAGTGGGCAGGTCCAACCAAGGCCTTGACCCTGAGGGCCTGAGAGAGCGGGCCAACCCTCGGTGCCGGTaGGTGGTTTTGTCAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: GVGRSNQGLDPEGLRERANPRCR*VVLSNI Trigger: GATGTTTGACAAAACCACCAACCGGCACCGAGGGTT...GGCCCGCTCTCTCAGGCCCTCAGGGTCAAGGCCTTGGTTGGACCTGCCCACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGGGAGCCAGACGCTGTaGGGGGCAGCAGGGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSQYLHMIQDGMVPGARPGSQTL*GAAGQG Trigger: CCCCTGCCCTGCTGCCCCCAACAGCGTCTGGCTCCC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CCA 90 bp | TCGAGCTCGTGCCGCGATTGCGCCAGCACTTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAGCCGAAACCCCTGGATCTCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSCRDCASTLSTPA*SMKVTKPKPLDLLV Trigger: GACCAAGAGATCCAGGGGTTTCGGCTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CCA 90 bp | GGAACTGGTAGGTGTAGCCAGGGGCGAGGCCTGTATAACTCCGGCTaGCGTAGGTTGTGGCTTGGAAACCTGGGTAACCCAGCATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GTGRCSQGRGLYNSG*RRLWLGNLGNPACR Trigger: TCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTCGCCCCTGGCTACACCTACCAGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257552.7 ENST00000546985.1 |
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| CDS-3UTR CAA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTCCTGGTGCCCACTCATaGCGGGGGTCGAGGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSQYLHMIQDGMVPGARPPGAHS*RGSRGK Trigger: CTTCCCCCTCGACCCCCGCAATGAGTGGGCACCAGG...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS GCA 90 bp | GCCACCTTAGGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACCCCCGCCTGGTCCATGAAAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: ATLGSIVLESSSCRD*ASTLSTPAWSMKVT Trigger: CGTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCTAAGGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCCCGGGCTGAGCCCGTaGGCGACATCACCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFPGLSP*ATSPPL Trigger: CAAAGGAGGTGATGTCGCCAACGGGCTCAGCCCGGG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
||
| CDS-3UTR CAA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGTTCGAGTCACCATCTaGGGCTGTGCTCGCCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSQYLHMIQDGMVPGARPVRVTI*GCARRG Trigger: CCCTCGGCGAGCACAGCCCAAGATGGTGACTCGAAC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTGAGCTCGTGCCGCGATaGCGCCAGCACTTTATCCAC | + |
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Preference number: 5 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFELVPR*RQHFIH Trigger: GTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTC...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTTCCGGCTGGCGTAGGTaGTGGCTTGGAAACCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFSGWRR*WLGNLG Trigger: ACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGA...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTGGCGTAGGTTGTGGCTaGGAAACCTGGGTAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: TSQYLHMIQDGMVPGARPGVGCG*ETWVTQ Trigger: CTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCC...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | GTAGCAGGCTCCCTCCGCCTTCACTCCAGCTATGCACAAATCCAAAAGCCTTTTCTTCAGTGGTACCCATaGGTGAAGGCTGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: VAGSLRLHSSYAQIQKPFLQWYP*VKAVAI Trigger: GATTGCCACAGCCTTCACCAATGGGTACCACTGAAG...AAAAGGCTTTTGGATTTGTGCATAGCTGGAGTGAAGGCGGAGGGAGCCTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS-3UTR CAA 90 bp | ACCTCACAGTATTTACATATGATACAGGACGGGATGGTTCCAGGGGCTCGGCCTAAACTGCTCAAAATATaGCTTCACGTCCTCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: TSQYLHMIQDGMVPGARPKLLKI*LHVLHR Trigger: ACGGTGGAGGACGTGAAGCAATATTTTGAGCAGTTT...AGGCCGAGCCCCTGGAACCATCCCGTCCTGTATCATATGTAAATACTGTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS GCA 72 bp | CCAGGGGTGAGAGCCTGTCCCTCGAACCACAGCCGCTaGCGCCGCTGCCGCCGCCATTGGTCCGTAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PGVRACPSNHSR*RRCRRHWSVGS Trigger: ACTGCCTACGGACCAATGGCGGCGGCAGCGGCGGCAGCGGCTGTGGTTCGAGGGACAGGCTCTCACCCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257552.7 ENST00000546985.1 |
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| CDS TCA 72 bp | GGAGTCGAACCTGGAGGGGGAGCCATCGTCCAGGGGTaGGAGCCTGTCCCTCGAACCACAGCCGCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GVEPGGGAIVQG*EPVPRTTAAAA Trigger: GGCGGCAGCGGCTGTGGTTCGAGGGACAGGCTCTCACCCCTGGACGATGGCTCCCCCTCCAGGTTCGACTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000257552.7 ENST00000546985.1 |
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| CDS TCA 72 bp | CTGCCGCCGCTGCCGCCGCCATTGGTCCGTAGGCAGTaGGAGGAATGGCGGGGAACTGGTAGGTGTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPPLPPPLVRRQ*EEWRGTGRCSQ Trigger: CTGGCTACACCTACCAGTTCCCCGCCATTCCTCTCACTGCCTACGGACCAATGGCGGCGGCAGCGGCGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546985.1 |
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| CDS CCA 72 bp | GGCAGTGAGAGGAATGGCTGTAAGCTCGGGGAGGACTaGGGCGCTCGGGAGAGGGGTCCGCTCTACACGGAA | + |
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Preference number: 6 (lower is better) Translates to: GSERNGCKLGED*GARERGPLYTE Trigger: TTCCGTGTAGAGCGGACCCCTCTCCCGAGCGCCCCAGTCCTCCCCGAGCTTACAGCCATTCCTCTCACTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS TCA 72 bp | CATTCCGTAGGGCATGACTCGAGACCTCCCCCGGGCTaGGCCCGTTGGCGACATCACCTCCTTTGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HSVGHDSRPPPG*ARWRHHLLWLS Trigger: GCTCAGCCAAAGGAGGTGATGTCGCCAACGGGCTCAGCCCGGGGGAGGTCTCGAGTCATGCCCTACGGAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000257552.7 ENST00000546622.1 ENST00000546985.1 |
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| CDS CCA 72 bp | TCCCGCATCACCAGACACTCCTTCACCTCCCCGAACTaGCCGAAGTATTCGCGCAGCCCTTCCTGCGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: SRITRHSFTSPN*PKYSRSPSCVV Trigger: GACTACGCAGGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAGGAGTGTCTGGTGATGCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CCA 72 bp | GGGCGAGGCCTGTATAACTCCGGCTGGCGTAGGTTGTaGCTTGGAAACCTGGGTAACCCAGCATGCCGATGC | + |
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Preference number: 6 (lower is better) Translates to: GRGLYNSGWRRL*LGNLGNPACRC Trigger: GCATCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257552.7 ENST00000546622.1 ENST00000546985.1 |
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| CDS GCA 72 bp | GGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATTaGGCCAGCACTTTATCCACCCCCGCCTGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GSIVLESSSCRD*ASTLSTPAWSM Trigger: CATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS GCA 72 bp | GCCACCTTAGGGTCAATTGTTTTGGAGTCGAGCTCGTaGCGCGATTGCGCCAGCACTTTATCCACCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ATLGSIVLESSS*RDCASTLSTPA Trigger: GGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCTAAGGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000257552.7 ENST00000546985.1 |
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| CDS CCA 72 bp | TGCCGCGATTGCGCCAGCACTTTATCCACCCCCGCCTaGTCCATGAAAGTGACGAAGCCGAAACCCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: CRDCASTLSTPA*SMKVTKPKPLD Trigger: ATCCAGGGGTTTCGGCTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CCA 72 bp | AGGTGTAGCCAGGGGCGAGGCCTGTATAACTCCGGCTaGCGTAGGTTGTGGCTTGGAAACCTGGGTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: RCSQGRGLYNSG*RRLWLGNLGNP Trigger: TGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTCGCCCCTGGCTACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257552.7 ENST00000546985.1 |
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| CDS CAA 72 bp | GAGGCCTGTATAACTCCGGCTGGCGTAGGTTGTGGCTaGGAAACCTGGGTAACCCAGCATGCCGATGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: EACITPAGVGCG*ETWVTQHADAQ Trigger: CTGGGCATCGGCATGCTGGGTTACCCAGGTTTCCAAGCCACAACCTACGCCAGCCGGAGTTATACAGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257552.7 ENST00000546622.1 ENST00000546985.1 |
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| CDS CAA 90 bp | GGCCACCTTAGGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATaGCGCCAGCACTTTATCCACCCCCGCCTGGTCCATGAAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GHLRVNCFGVELVPR*RQHFIHPRLVHESD Trigger: GTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCTAAGGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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| CDS CAA 72 bp | AGGGTCAATTGTTTTGGAGTCGAGCTCGTGCCGCGATaGCGCCAGCACTTTATCCACCCCCGCCTGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RVNCFGVELVPR*RQHFIHPRLVH Trigger: ATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257552.7 |
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