Pregenerated sensors for MSANTD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000120458Ensembl transcript IDs: ENST00000239614.8, ENST00000374979.8, ENST00000524950.1, ENST00000526629.1, ENST00000527140.1, ENST00000634413.1, ENST00000650095.1, ENST00000674284.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAACAGGCTTCTCAGAGTTaGAGTACTCCCGAAGTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQQASQS*STPEVA Trigger: AGCGACTTCGGGAGTACTTCAACTCTGAGAAGCCTG...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| 3UTR-3UTR GCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAAGATGTCTCTCTTCTGTaGTTCTTCAGAAGACTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQDVSLL*FFRRLL Trigger: CAAGAGTCTTCTGAAGAAGCACAGAAGAGAGACATC...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAATCAGGCTTCTCAGAGTaGAAGTACTCCCGAAGTCGC | + |
|
Preference number: 3 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQSGFSE*KYSRSR Trigger: GCGACTTCGGGAGTACTTCAACTCTGAGAAGCCTGA...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAACTGGCCCGGGGGCCTTaGTGCCGAACACCGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQLARGP*CRTPCR Trigger: CCGGCACGGTGTTCGGCAGCAAGGCCCCCGGGCCAG...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAAGCGCTCGTACATGGCTaGCCCGGGGGCCTTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQALVHG*PGGLAA Trigger: GGCAGCAAGGCCCCCGGGCCAGCCATGTACGAGCGC...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAGCCCGGGGGCCTTGCTaGCGAACACCGTGCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVARGPC*RTPCRL Trigger: GAGCCGGCACGGTGTTCGGCAGCAAGGCCCCCGGGC...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAATGCTGCCGAACACCGTaGCGGCTCCCTCCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQCCRTP*RLPPAA Trigger: AGCAGCTGGAGGGAGCCGGCACGGTGTTCGGCAGCA...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAAAGGCACCCCGAGGCGTaGAAGGGTCGGACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQRHPEA*KGRTAM Trigger: CATCGCTGTCCGACCCTTCCACGCCTCGGGGTGCCT...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR TCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATGCCCCACACTGCGATaGGCGCGTTCGTCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVCPTLR*ARSSRL Trigger: CAGCCGAGACGAACGCGCTCATCGCAGTGTGGGGCA...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAACTCGTTGCCCCACACTaGGATGAGCGCGTTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQLVAPH*DERVRL Trigger: GAGACGAACGCGCTCATCGCAGTGTGGGGCAACGAG...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATTTTTAGCGGCGAGTTaGCGGGCAGCTCCGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVFLAAS*RAAPSH Trigger: GTGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAA...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAAGGGTCGGACAGCGATaGATTTCCGTCGCTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVRVGQR*ISVAQA Trigger: GGCCTGAGCGACGGAAATCCATCGCTGTCCGACCCT...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAGGGTCCAGGGAACTTTaGTCCATGTGTGGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVGSREL*SMCGER Trigger: CCTCTCACCACACATGGAGCAAAGTTCCCTGGACCC...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAAAACATTCCCACCAGTTaGTTTGGAGTGGGCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQNIPTS*FGVGNG Trigger: CCCATTGCCCACTCCAAACCAACTGGTGGGAATGTT...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR TCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTACAGGCTTCTCAGAGTTaGAGTACTCCCGAAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVQASQS*STPEVA Trigger: AGCGACTTCGGGAGTACTTCAACTCTGAGAAGCCTG...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCCACCAGTTGGTTTaGAGTGGGCAATGGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVSHQLV*SGQWVS Trigger: GGATACCCATTGCCCACTCCAAACCAACTGGTGGGA...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR GCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAGATGTCTCTCTTCTGTaGTTCTTCAGAAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVDVSLL*FFRRLL Trigger: CAAGAGTCTTCTGAAGAAGCACAGAAGAGAGACATC...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR TCA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTACCAGGCAATAAATATTaGACAACATTCCCACCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AINIEQHSHQLVWSGQWVPGNKY*TTFPPV Trigger: AACTGGTGGGAATGTTGTTCAATATTTATTGCCTGG...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS TCA 90 bp | CGGGCCTGGCTCGCCCGCGGGCGGATGGCTCCGGGTCTCTGCTGCTaGGGATGTGGCTGCCGGGCGGAGGTCGTCCACTCCCCTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAWLARGRMAPGLCC*GCGCRAEVVHSPGP Trigger: AGGCCCAGGGGAGTGGACGACCTCCGCCCGGCAGCCACATCCTCAGCAGCAGAGACCCGGAGCCATCCGCCCGCGGGCGAGCCAGGCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS CCA 90 bp | CTGCTGCTGAGGATGTGGCTGCCGGGCGGAGGTCGTCCACTCCCCTaGGCCTTTCTCCGCGAGCCCTCCCACGCCGCCCGCTCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRMWLPGGGRPLP*AFLREPSHAARSSP Trigger: GGGAGAGGAGCGGGCGGCGTGGGAGGGCTCGCGGAGAAAGGCCCAGGGGAGTGGACGACCTCCGCCCGGCAGCCACATCCTCAGCAGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS CCA 90 bp | GCTCGCCCGCGGGCGGATGGCTCCGGGTCTCTGCTGCTGAGGATGTaGCTGCCGGGCGGAGGTCGTCCACTCCCCTGGGCCTTTCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ARPRADGSGSLLLRM*LPGGGRPLPWAFLR Trigger: GCGGAGAAAGGCCCAGGGGAGTGGACGACCTCCGCCCGGCAGCCACATCCTCAGCAGCAGAGACCCGGAGCCATCCGCCCGCGGGCGAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS TCA 90 bp | GCCACAGCTGGAGCACAGCATTCAGTTCTGGGCATCGAACCAGCTTaGTGCGCTCCCGGCACTGGGACGGGGTCCGCTCGTAGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAGAQHSVLGIEPA*CAPGTGTGSARSPA Trigger: AGCTGGGCTACGAGCGGACCCCGTCCCAGTGCCGGGAGCGCATCAAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCAGCTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634413.1 |
||
| CDS CCA 90 bp | AAGCCGGGGAAAGCACCTCCATCTTCGGAATTTTTAGCGGCGAGTTaGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATCTTCCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KPGKAPPSSEFLAAS*RAAPSHRAQPSSKR Trigger: CCGCTTGGAAGATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000674284.1 |
||
| CDS CCA 90 bp | TATTCAGCACCGGTGAGGCCACAGCTGGAGCACAGCATTCAGTTCTaGGCATCGAACCAGCTCTCTGGAGCCTCAGTCTTTGTGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YSAPVRPQLEHSIQF*ASNQLSGASVFVGN Trigger: GTTCCCCACAAAGACTGAGGCTCCAGAGAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCAGCTGTGGCCTCACCGGTGCTGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS-3UTR CAA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAGCTGGCCCGGGGGCCTaGCTGCCGAACACCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AINIEQHSHQLVWSGQWVAGPGA*LPNTVP Trigger: CGGCACGGTGTTCGGCAGCAAGGCCCCCGGGCCAGC...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS CCA 90 bp | ACAGCTGGAGCACAGCATTCAGTTCTGGGCATCGAACCAGCTCTCTaGAGCCTCAGTCTTTGTGGGGAACTGTCCAGGACTGAATCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TAGAQHSVLGIEPAL*SLSLCGELSRTESY Trigger: ATAGGATTCAGTCCTGGACAGTTCCCCACAAAGACTGAGGCTCCAGAGAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS-3UTR CAA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAATTTTTAGCGGCGAGTaGGCGGGCAGCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AINIEQHSHQLVWSGQWVIFSGE*AGSSEP Trigger: TGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAAT...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CAA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAATTCCCACCAGTTGGTTaGGAGTGGGCAATGGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQFPPVG*EWAMGI Trigger: GATACCCATTGCCCACTCCAAACCAACTGGTGGGAA...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CAA 90 bp | ATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCCAGTCAACAACATTCCCACCAGTaGGTTTGGAGTGGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: IEQHSHQLVWSGQWVSSQQHSHQ*VWSGQW Trigger: CCATTGCCCACTCCAAACCAACTGGTGGGAATGTTG...TTGACTGGATACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CAA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTAGACAGGTATTTCATCTaGATGCGCTCCCGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AINIEQHSHQLVWSGQWVDRYFI*MRSRHW Trigger: CCAGTGCCGGGAGCGCATCAAGATGAAATACCTGTC...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS-3UTR CAA 90 bp | GCAATAAATATTGAACAACATTCCCACCAGTTGGTTTGGAGTGGGCAATGGGTATCAGGCTTCTCAGAGTaGAAGTACTCCCGAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AINIEQHSHQLVWSGQWVSGFSE*KYSRSR Trigger: GCGACTTCGGGAGTACTTCAACTCTGAGAAGCCTGA...TACCCATTGCCCACTCCAAACCAACTGGTGGGAATGTTGTTCAATATTTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524950.1 |
||
| CDS CCA 90 bp | AAGGACGGGACAGAGGGGTGTTATTTCACTTCCTTTTCTGCCATGTaGCACACAGCAAATAAATATCATTATGCAAATCCACAGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDGTEGCYFTSFSAM*HTANKYHYANPQTK Trigger: TTTTGTCTGTGGATTTGCATAATGATATTTATTTGCTGTGTGCCACATGGCAGAAAAGGAAGTGAAATAACACCCCTCTGTCCCGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526629.1 |
||
| CDS CCA 72 bp | AGGATGTGGCTGCCGGGCGGAGGTCGTCCACTCCCCTaGGCCTTTCTCCGCGAGCCCTCCCACGCCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RMWLPGGGRPLP*AFLREPSHAAR Trigger: GCGGGCGGCGTGGGAGGGCTCGCGGAGAAAGGCCCAGGGGAGTGGACGACCTCCGCCCGGCAGCCACATCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS TCA 72 bp | CTCGCCCGCGGGCGGATGGCTCCGGGTCTCTGCTGCTaGGGATGTGGCTGCCGGGCGGAGGTCGTCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LARGRMAPGLCC*GCGCRAEVVHS Trigger: GGAGTGGACGACCTCCGCCCGGCAGCCACATCCTCAGCAGCAGAGACCCGGAGCCATCCGCCCGCGGGCGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS CCA 72 bp | CGGGCGGATGGCTCCGGGTCTCTGCTGCTGAGGATGTaGCTGCCGGGCGGAGGTCGTCCACTCCCCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RADGSGSLLLRM*LPGGGRPLPWA Trigger: GGCCCAGGGGAGTGGACGACCTCCGCCCGGCAGCCACATCCTCAGCAGCAGAGACCCGGAGCCATCCGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239614.8 ENST00000674284.1 |
||
| CDS CCA 72 bp | CACTGCCCGGCCCGAGCGGGGAGGCACCCCGAGGCGTaGAAGGGTCGGACAGCGATGGATTTCCGTCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HCPARAGRHPEA*KGRTAMDFRRS Trigger: TGAGCGACGGAAATCCATCGCTGTCCGACCCTTCCACGCCTCGGGGTGCCTCCCCGCTCGGGCCGGGCAGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000524950.1 ENST00000527140.1 ENST00000634413.1 ENST00000674284.1 |
||
| CDS CCA 72 bp | GGAGGCACCCCGAGGCGTGGAAGGGTCGGACAGCGATaGATTTCCGTCGCTCAGGCCACCAGGAGAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GGTPRRGRVGQR*ISVAQATRRSR Trigger: CCGGCTTCTCCTGGTGGCCTGAGCGACGGAAATCCATCGCTGTCCGACCCTTCCACGCCTCGGGGTGCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000524950.1 ENST00000527140.1 ENST00000634413.1 ENST00000674284.1 |
||
| CDS TCA 72 bp | GGAGCACAGCATTCAGTTCTGGGCATCGAACCAGCTTaGTGCGCTCCCGGCACTGGGACGGGGTCCGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GAQHSVLGIEPA*CAPGTGTGSAR Trigger: ACGAGCGGACCCCGTCCCAGTGCCGGGAGCGCATCAAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634413.1 |
||
| CDS CAA 72 bp | TGGAGCACAGCATTCAGTTCTGGGCATCGAACCAGCTaGATGCGCTCCCGGCACTGGGACGGGGTCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WSTAFSSGHRTS*MRSRHWDGVRS Trigger: CGAGCGGACCCCGTCCCAGTGCCGGGAGCGCATCAAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634413.1 |
||
| CDS CAA 90 bp | GAAGCCGGGGAAAGCACCTCCATCTTCGGAATTTTTAGCGGCGAGTaGGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATCTTCCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: EAGESTSIFGIFSGE*AGSSEPQGAAIFQA Trigger: CGCTTGGAAGATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAATTCCGAAGATGGAGGTGCTTTCCCCGGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000527140.1 ENST00000674284.1 |
||
| CDS CCA 72 bp | CCGGTGAGGCCACAGCTGGAGCACAGCATTCAGTTCTaGGCATCGAACCAGCTTGATGCGCTCCCGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PVRPQLEHSIQF*ASNQLDALPAL Trigger: CAGTGCCGGGAGCGCATCAAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCAGCTGTGGCCTCACCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634413.1 |
||
| CDS CAA 72 bp | GAAAGCACCTCCATCTTCGGAATTTTTAGCGGCGAGTaGGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: ESTSIFGIFSGE*AGSSEPQGAAI Trigger: GATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAATTCCGAAGATGGAGGTGCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000524950.1 ENST00000527140.1 ENST00000674284.1 |
||
| CDS CCA 72 bp | AAAGCACCTCCATCTTCGGAATTTTTAGCGGCGAGTTaGCGGGCAGCTCCGAGCCACAGGGCGCAGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: KAPPSSEFLAAS*RAAPSHRAQPS Trigger: AGATGGCTGCGCCCTGTGGCTCGGAGCTGCCCGCCAACTCGCCGCTAAAAATTCCGAAGATGGAGGTGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000239614.8 ENST00000374979.8 ENST00000524950.1 ENST00000527140.1 ENST00000674284.1 |
||
| CDS CCA 72 bp | CCGGTGAGGCCACAGCTGGAGCACAGCATTCAGTTCTaGGCATCGAACCAGCTCTCTGGAGCCTCAGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PVRPQLEHSIQF*ASNQLSGASVF Trigger: AAAGACTGAGGCTCCAGAGAGCTGGTTCGATGCCCAGAACTGAATGCTGTGCTCCAGCTGTGGCCTCACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS CAA 90 bp | GCCTCAGTCTTTGTGGGGAACTGTCCAGGACTGAATCCTATCAGCTaGCACTTCATTCTGAATCTGGCTATCAATGACTCACTCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASVFVGNCPGLNPIS*HFILNLAINDSLTL Trigger: CAAAGTGAGTGAGTCATTGATAGCCAGATTCAGAATGAAGTGCAAGCTGATAGGATTCAGTCCTGGACAGTTCCCCACAAAGACTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS CAA 72 bp | TTTGTGGGGAACTGTCCAGGACTGAATCCTATCAGCTaGCACTTCATTCTGAATCTGGCTATCAATGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: FVGNCPGLNPIS*HFILNLAINDS Trigger: TGAGTCATTGATAGCCAGATTCAGAATGAAGTGCAAGCTGATAGGATTCAGTCCTGGACAGTTCCCCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS TCA 72 bp | TATCAGCTTGCACTTCATTCTGAATCTGGCTATCAATaGCTCACTCACTTTGTGTTTATAACTGGTCAATAC | + |
|
Preference number: 6 (lower is better) Translates to: YQLALHSESGYQ*LTHFVFITGQY Trigger: GTATTGACCAGTTATAAACACAAAGTGAGTGAGTCATTGATAGCCAGATTCAGAATGAAGTGCAAGCTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650095.1 |
||
| CDS CAA 72 bp | AGGCACTGCCAGACTAAATTTATCCTAAACGTGAGATaGCTCTCCATAAGCCAATATGTTAACTATTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RHCQTKFILNVR*LSISQYVNYFH Trigger: GTGAAAATAGTTAACATATTGGCTTATGGAGAGCAATCTCACGTTTAGGATAAATTTAGTCTGGCAGTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526629.1 |
||