Pregenerated sensors for MS4A6E (Homo sapiens)
Ensembl gene IDs: ENSG00000166926Ensembl transcript IDs: ENST00000530509.1, ENST00000684409.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGCTGGCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGTGAGAGAGAATTCTCCTaGGATAATTCTCAGTTACAC | + |
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Preference number: 2 (lower is better) Translates to: CWPCTYPLIFQLQTHYFCEREFS*DNSQLH Trigger: GTGTAACTGAGAATTATCGCAGGAGAATTCTCTCTC...ACAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGCCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| 3UTR-3UTR GCA 90 bp | GCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGTTAGCCACACTTCTTTCAGACTaGAATGAGGCAGGATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: AMHIPLNFSTSDTLFLLATLLSD*NEAGFN Trigger: ATTAAATCCTGCCTCATTGCAGTCTGAAAGAAGTGT...GGCTAACAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| 3UTR-3UTR CAA 90 bp | GCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGTTAGCCTTTAATGCAGCCGGGTaGACAGACAGGAGAATGAAA | + |
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Preference number: 3 (lower is better) Translates to: AMHIPLNFSTSDTLFLLAFNAAG*TDRRMK Trigger: TTTCATTCTCCTGTCTGTCAACCCGGCTGCATTAAA...GGCTAACAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | ATGCGTTGCTGGCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATCCAGCCAGGCTGCTATaGACCTCAGATCACATAAGT | + |
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Preference number: 4 (lower is better) Translates to: MRCWPCTYPLIFQLQTHYPARLL*TSDHIS Trigger: ACTTATGTGATCTGAGGTGCATAGCAGCCTGGCTGG...ATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGCCAGCAACGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | TTGCTGGCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGTGCTTCCAGCCAGGCTaGTATGCACCTCAGATCACA | + |
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Preference number: 4 (lower is better) Translates to: LLAMHIPLNFSTSDTLFLCFQPG*YAPQIT Trigger: TGTGATCTGAGGTGCATAGCAGCCTGGCTGGAAGCA...CAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGCCAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | CTTCTTCCAAAGAGAGAGAATTCTCCTGCGATAATTCTCAGTTACACTCTCCATATGCGTTGCTGGCCATaGACATACCCCTTAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LLPKRENSPAIILSYTLHMRCWP*TYPLIF Trigger: AAAAATTAAGGGGTATGTGCATGGCCAGCAACGCAT...ATGGAGAGTGTAACTGAGAATTATCGCAGGAGAATTCTCTCTCTTTGGAAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | TGCTGGCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGTCTCAGATCACATAAGTaGAGAGGCAATTCTAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: CWPCTYPLIFQLQTHYFCLRSHK*RGNSRN Trigger: GTTTCTAGAATTGCCTCTGCACTTATGTGATCTGAG...ACAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGCCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | TCTTCTTCCAAAGAGAGAGAATTCTCCTGCGATAATTCTCAGTTACACTCTCCAACACTTCTTTCAGACTaGAATGAGGCAGGATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSKEREFSCDNSQLHSPTLLSD*NEAGFN Trigger: ATTAAATCCTGCCTCATTGCAGTCTGAAAGAAGTGT...TGGAGAGTGTAACTGAGAATTATCGCAGGAGAATTCTCTCTCTTTGGAAGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS-3UTR GCA 90 bp | TTGCTGGCCATGCACATACCCCTTAATTTTTCAACTTCAGACACATTATTTCTGGAGAGAGAATTCTCCTaGGATAATTCTCAGTTACAC | + |
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Preference number: 4 (lower is better) Translates to: LLAMHIPLNFSTSDTLFLEREFS*DNSQLH Trigger: GTGTAACTGAGAATTATCGCAGGAGAATTCTCTCTC...CAGAAATAATGTGTCTGAAGTTGAAAAATTAAGGGGTATGTGCATGGCCAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS GCA 90 bp | CTACTTAGGGTCACGTTGCTTGCTTCCAAGATGGTATCTTGTTGCTaGATCTTCCAGATAGGACAAACTGTGTCCTCACATGGTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: LLRVTLLASKMVSCC*IFQIGQTVSSHGGM Trigger: CATTCCACCATGTGAGGACACAGTTTGTCCTATCTGGAAGATGCAGCAACAAGATACCATCTTGGAAGCAAGCAACGTGACCCTAAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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| CDS GCA 90 bp | CATCTACTTAGGGTCACGTTGCTTGCTTCCAAGATGGTATCTTGTTaGTGCATCTTCCAGATAGGACAAACTGTGTCCTCACATGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: HLLRVTLLASKMVSC*CIFQIGQTVSSHGG Trigger: TCCACCATGTGAGGACACAGTTTGTCCTATCTGGAAGATGCAGCAACAAGATACCATCTTGGAAGCAAGCAACGTGACCCTAAGTAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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| CDS-3UTR CAA 90 bp | TCTTCTTCCAAAGAGAGAGAATTCTCCTGCGATAATTCTCAGTTACACTCTCCATTTAATGCAGCCGGGTaGACAGACAGGAGAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: SSSKEREFSCDNSQLHSPFNAAG*TDRRMK Trigger: TTTCATTCTCCTGTCTGTCAACCCGGCTGCATTAAA...TGGAGAGTGTAACTGAGAATTATCGCAGGAGAATTCTCTCTCTTTGGAAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530509.1 |
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| CDS GCA 72 bp | GCCAAAGTTTTGGAACTGAGAAGTCCACGATCAAGGTaGCACAGGTTCAGCATCTACTTAGGGTCACGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AKVLELRSPRSR*HRFSIYLGSRC Trigger: GCAACGTGACCCTAAGTAGATGCTGAACCTGTGGCACCTTGATCGTGGACTTCTCAGTTCCAAAACTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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| CDS CAA 72 bp | TGCCACAGGTTCAGCATCTACTTAGGGTCACGTTGCTaGCTTCCAAGATGGTATCTTGTTGCTGCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CHRFSIYLGSRC*LPRWYLVAASS Trigger: GGAAGATGCAGCAACAAGATACCATCTTGGAAGCAAGCAACGTGACCCTAAGTAGATGCTGAACCTGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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| CDS TCA 72 bp | TGTGATGTCATAATGGTGTTGCCAAAGTTTTGGAACTaGGAAGTCCACGATCAAGGTGCCACAGGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CDVIMVLPKFWN*EVHDQGATGSA Trigger: TGCTGAACCTGTGGCACCTTGATCGTGGACTTCTCAGTTCCAAAACTTTGGCAACACCATTATGACATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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| CDS GCA 72 bp | GTCACGTTGCTTGCTTCCAAGATGGTATCTTGTTGCTaGATCTTCCAGATAGGACAAACTGTGTCCTCACAT | + |
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Preference number: 6 (lower is better) Translates to: VTLLASKMVSCC*IFQIGQTVSSH Trigger: ATGTGAGGACACAGTTTGTCCTATCTGGAAGATGCAGCAACAAGATACCATCTTGGAAGCAAGCAACGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684409.1 |
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