Pregenerated sensors for MS4A5 (Homo sapiens)
Ensembl gene IDs: ENSG00000166930Ensembl transcript IDs: ENST00000300190.7, ENST00000528093.1, ENST00000531403.5, ENST00000533885.5, ENST00000534071.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCAAGCACAGTACTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCTCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTT | + |
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Preference number: 1 (lower is better) Translates to: IKHSTQMEMQKSPVF*VSHAGSCRPELFLF Trigger: AAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTACTGTGCTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| 3UTR GCA 72 bp | AGTACTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCTCTCACGCTGGGAGCTGTAGACCGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: STQMEMQKSPVF*VSHAGSCRPEL Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR GCA 90 bp | CAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGCTGGGAGCTGTAGTCTAGTCTGGAGCTaGAGGGTCATCAAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: QMEMQKSPVFCVSHAGSCSLVWS*RVIKHS Trigger: ACTGTGCTTGATGACCCTGCAGCTCCAGACTAGACT...ACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR GCA 90 bp | AAGCACAGTACTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACAAATCACCCGTCTTCTaGGTCTCTCACGCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KHSTQMEMQKSPVFCVSHKSPVF*VSHAGS Trigger: GCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTT...GTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTACTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR CCA 90 bp | AAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGCTGGGAGCTGTAGACCGGGAGTTGAAAAGGTCGTaGCTGAAAGTTCTGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: KCRNHPSSASLTLGAVDRELKRS*LKVLWT Trigger: AGTCCACAGAACTTTCAGCCACGACCTTTTCAACTC...CCGGTCTACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR TCA 90 bp | GTCTCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTTGGCCATCTTGGCCATATTCTGAAGCAGTaGTTTCTGGAGGAAATACCA | + |
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Preference number: 4 (lower is better) Translates to: VSHAGSCRPELFLFGHLGHILKQ*FLEEIP Trigger: TGGTATTTCCTCCAGAAATCACTGCTTCAGAATATG...GCCAAGATGGCCAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR CCA 90 bp | TGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGCTGGGAGCTGTAGACCTTTTTAGTCTAGTCTaGAGCTGCAGGGTCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: WKCRNHPSSASLTLGAVDLFSLV*SCRVIK Trigger: CTTGATGACCCTGCAGCTCCAGACTAGACTAAAAAG...GTCTACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR TCA 90 bp | CTTTTTAGTCTAGTCTGGAGCTGCAGGGTCATCAAGCACAGTACTCAGATGGAAACTGTGTGCGGTGCTTaGATCCATGATGGTGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LFSLVWSCRVIKHSTQMETVCGA*IHDGVG Trigger: ACCGACACCATCATGGATTCAAGCACCGCACACAGT...TTCCATCTGAGTACTGTGCTTGATGACCCTGCAGCTCCAGACTAGACTAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR GCA 90 bp | TCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGCTGGGAGCTGGTACTCAGATGGAAATaGAGAAATCACCCGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SDGNAEITRLLRLSRWELVLRWK*RNHPSS Trigger: AGAAGACGGGTGATTTCTGCATTTCCATCTGAGTAC...CAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR CCA 90 bp | ATGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGCTGGGAGCTGTAGAAGCACAGTACTCAGATaGAAATGCAGAAATCACCCG | + |
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Preference number: 4 (lower is better) Translates to: MEMQKSPVFCVSHAGSCRSTVLR*KCRNHP Trigger: CGGGTGATTTCTGCATTTCCATCTGAGTACTGTGCT...TCTACAGCTCCCAGCGTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR TCA 90 bp | ATTCTCACAGTGCTAGTCAACAACATTGTTCACAATCACAATCCTCTGAGTGGCACTGTGTGCGGTGCTTaGATCCATGATGGTGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: ILTVLVNNIVHNHNPLSGTVCGA*IHDGVG Trigger: ACCGACACCATCATGGATTCAAGCACCGCACACAGT...GCCACTCAGAGGATTGTGATTGTGAACAATGTTGTTGACTAGCACTGTGAGAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531403.5 |
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| CDS-3UTR CCA 90 bp | CTAGTCTGGAGCTGCAGGGTCATCAAGCACAGTACTCAGATGGAAATGCAGAAAATTCCAAACAGGATCTaGATAGTCCCTAAGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LVWSCRVIKHSTQMEMQKIPNRI*IVPKIF Trigger: GAAAATCTTAGGGACTATCCAGATCCTGTTTGGAAT...TTTCTGCATTTCCATCTGAGTACTGTGCTTGATGACCCTGCAGCTCCAGACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR CCA 90 bp | TCTCACAGTGCTAGTCAACAACATTGTTCACAATCACAATCCTCTGAGTGGCACTCACAATCCTCTGAGTaGCACCCCAAAATTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SHSASQQHCSQSQSSEWHSQSSE*HPKIEK Trigger: TTTCTCAATTTTGGGGTGCCACTCAGAGGATTGTGA...GTGCCACTCAGAGGATTGTGATTGTGAACAATGTTGTTGACTAGCACTGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000528093.1 ENST00000531403.5 |
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| CDS-3UTR TCA 90 bp | ATTGTTCACAATCACAATCCTCTGAGTGGCACCCCAAAATTGAGAAAGGCAGAGCATATTCTGAAGCAGTaGTTTCTGGAGGAAATACCA | + |
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Preference number: 4 (lower is better) Translates to: IVHNHNPLSGTPKLRKAEHILKQ*FLEEIP Trigger: TGGTATTTCCTCCAGAAATCACTGCTTCAGAATATG...CTCTGCCTTTCTCAATTTTGGGGTGCCACTCAGAGGATTGTGATTGTGAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531403.5 |
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| CDS-3UTR CCA 90 bp | TATTCTCACAGTGCTAGTCAACAACATTGTTCACAATCACAATCCTCTGAGTGGGAGTTGAAAAGGTCGTaGCTGAAAGTTCTGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: YSHSASQQHCSQSQSSEWELKRS*LKVLWT Trigger: AGTCCACAGAACTTTCAGCCACGACCTTTTCAACTC...CCACTCAGAGGATTGTGATTGTGAACAATGTTGTTGACTAGCACTGTGAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531403.5 |
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| 3UTR CAA 72 bp | CAAGAACAGGACAGTAACAGCCTTACACTGACTATTTaGGTGAGAATAACCACAAATGTAGTTTTGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: QEQDSNSLTLTI*VRITTNVVLIR Trigger: TCTGATCAAAACTACATTTGTGGTTATTCTCACCAAAATAGTCAGTGTAAGGCTGTTACTGTCCTGTTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531403.5 |
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| CDS TCA 90 bp | AAAAGGTCGTGGCTGAAAGTTCTGTGGACTCATATTCTGAAGCAGTaGTTTCTGGAGGAAATACCAGAAACACCGGACTGTGTGCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: KRSWLKVLWTHILKQ*FLEEIPETPDCVRC Trigger: GCACCGCACACAGTCCGGTGTTTCTGGTATTTCCTCCAGAAATCACTGCTTCAGAATATGAGTCCACAGAACTTTCAGCCACGACCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000300190.7 ENST00000531403.5 ENST00000533885.5 ENST00000534071.1 |
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| CDS-3UTR CAA 90 bp | CTTTTTAGTCTAGTCTGGAGCTGCAGGGTCATCAAGCACAGTACTCAGATGGAAGCAAGGGGCTTTGAGTaGAAAAGGTCGTGGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: LFSLVWSCRVIKHSTQMEARGFE*KRSWLK Trigger: TTTCAGCCACGACCTTTTCAACTCAAAGCCCCTTGC...TTCCATCTGAGTACTGTGCTTGATGACCCTGCAGCTCCAGACTAGACTAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS-3UTR CAA 90 bp | AGTCAACAACATTGTTCACAATCACAATCCTCTGAGTGGCACCCCAAAATTGAGGCAAGGGGCTTTGAGTaGAAAAGGTCGTGGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SQQHCSQSQSSEWHPKIEARGFE*KRSWLK Trigger: TTTCAGCCACGACCTTTTCAACTCAAAGCCCCTTGC...CTCAATTTTGGGGTGCCACTCAGAGGATTGTGATTGTGAACAATGTTGTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000531403.5 |
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| CDS-3UTR CAA 90 bp | AAGCACAGTACTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCTCTCACGGTGTCGGTGATAATTaGAAAGGAGATGATTTAGTT | + |
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Preference number: 5 (lower is better) Translates to: KHSTQMEMQKSPVFCVSHGVGDN*KGDDLV Trigger: AACTAAATCATCTCCTTTCAAATTATCACCGACACC...GTGAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTACTGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533885.5 |
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| CDS GCA 72 bp | GATGAAACCAAATGTGAGGAGAATGATTCCAGCTATTaGTCCCAGGGCACTAAGAAAATTCATTATTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DETKCEENDSSY*SQGTKKIHYSA Trigger: AGCCGAATAATGAATTTTCTTAGTGCCCTGGGAGCAATAGCTGGAATCATTCTCCTCACATTTGGTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300190.7 ENST00000534071.1 |
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