Pregenerated sensors for MS4A4A (Homo sapiens)
Ensembl gene IDs: ENSG00000110079Ensembl transcript IDs: ENST00000343968.8, ENST00000527056.5, ENST00000529950.2, ENST00000529991.2, ENST00000649552.2, ENST00000679385.1, ENST00000679553.1, ENST00000680301.1, ENST00000680537.1, ENST00000680560.1, ENST00000680757.1, ENST00000680935.1, ENST00000681157.1, ENST00000681288.1, ENST00000681406.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATATCCAGACCCATTACTaGCCCCCAAATTGTGTACCC | + |
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Preference number: 2 (lower is better) Translates to: PDIHGNRVTSISIRCHTHIQTHY*PPNCVP Trigger: GGGTACACAATTTGGGGGTCAGTAATGGGTCTGGAT...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681157.1 |
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| 3UTR-3UTR GCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATAGGGCAGTCAGAATCTaGACAACCCCAAGGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: PDIHGNRVTSISIRCHTHRAVRI*TTPRTL Trigger: CAAAGTCCTTGGGGTTGTGCAGATTCTGACTGCCCT...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| 3UTR-3UTR GCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTAGGGCAGTCAGAATCTaGACAACCCCAAGGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: IHGNRVTSISIRCHTHHCRAVRI*TTPRTL Trigger: CAAAGTCCTTGGGGTTGTGCAGATTCTGACTGCCCT...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| 3UTR-3UTR GCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTTTAGGAGGAGCACCATaGCATCCAGACCCATTACTG | + |
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Preference number: 2 (lower is better) Translates to: IHGNRVTSISIRCHTHHCLGGAP*HPDPLL Trigger: CAGTAATGGGTCTGGATGGCATGGTGCTCCTCCTAA...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681157.1 |
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| 3UTR-3UTR GCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTAGGGCAGTCAGAATCTaGACAACCAATATTATCTCT | + |
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Preference number: 2 (lower is better) Translates to: IHGNRVTSISIRCHTHHCRAVRI*TTNIIS Trigger: AGAGATAATATTGGTTGTGCAGATTCTGACTGCCCT...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527056.5 |
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| 3UTR-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATTCGCGACGTCTATCATaGCCAATAATTTCAAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: PDIHGNRVTSISIRCHTHSRRLS*PIISRL Trigger: TAACCTTGAAATTATTGGCAATGATAGACGTCGCGA...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527056.5 |
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| CDS-3UTR TCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATGTTCCACCCCTCTTGTaGCCACCTTTCTTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHVPPLL*PPFFRP Trigger: AGGCCTGAAGAAAGGTGGTCACAAGAGGGGTGGAAC...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000681157.1 |
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| CDS-3UTR GCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATGATAGCTCGTGCACATaGAAGGACGGGCTGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHDSSCT*KDGLCY Trigger: GTAGCACAGCCCGTCCTTGCATGTGCACGAGCTATC...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR GCA 90 bp | AGGCTCATCAGGGCAGTCAGAATCTGCACAACCAATATTATCTCTCGCGACGTCAGGGCAGTCAGAATCTaGACAACCAATATTATCTCT | + |
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Preference number: 4 (lower is better) Translates to: RLIRAVRICTTNIISRDVRAVRI*TTNIIS Trigger: AGAGATAATATTGGTTGTGCAGATTCTGACTGCCCT...GACGTCGCGAGAGATAATATTGGTTGTGCAGATTCTGACTGCCCTGATGAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527056.5 |
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| CDS-3UTR TCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTGTTCCACCCCTCTTGTaGCCACCTTTCTTCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCVPPLL*PPFFRP Trigger: AGGCCTGAAGAAAGGTGGTCACAAGAGGGGTGGAAC...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000681157.1 |
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| CDS-3UTR GCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATTTAGGAGGAGCACCATaGCATCCAGACCCATTACTG | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHLGGAP*HPDPLL Trigger: CAGTAATGGGTCTGGATGGCATGGTGCTCCTCCTAA...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681157.1 |
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| CDS-3UTR GCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATTTAGGAGGAGCACCATaGCATCCAGACCCATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHLGGAP*HPDPLR Trigger: TCTTAATGGGTCTGGATGGCATGGTGCTCCTCCTAA...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343968.8 ENST00000529950.2 |
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| CDS-3UTR TCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTCCAGTACAGAGCTGGTaGTATTCATTCCTAGACTAC | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCPVQSW*YSFLDY Trigger: GTAGTCTAGGAATGAATATCACCAGCTCTGTACTGG...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR CCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCTGTTGATCTTTTGGTaGCCTCAAACCTCATTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHLLIFW*PQTSLS Trigger: ACTTAATGAGGTTTGAGGCCACCAAAAGATCAACAG...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR TCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCCCATGACAATTATTTaGGTTGCCATAGTAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHPMTII*VAIVVT Trigger: TGTAACTACTATGGCAACTCAAATAATTGTCATGGG...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR TCA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATGACATCTGCATATATTaGAACCATTTGCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: PDIHGNRVTSISIRCHTHDICIY*NHLQEC Trigger: ACATTCCTGCAAATGGTTTCAATATATGCAGATGTC...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000681157.1 |
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| CDS-3UTR TCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTGGAAGTAGATATCCTTaGTACAAGCCTTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCGSRYP*YKPFFR Trigger: CCTGAAGAAAGGCTTGTATCAAGGATATCTACTTCC...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529950.2 |
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| CDS-3UTR CCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTTCAAACCTCATTAAGTaGTGTGGGAGATGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCSNLIK*CGRCCF Trigger: GAAACAGCATCTCCCACACCACTTAATGAGGTTTGA...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR GCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTTATATTGAAACCATTTaGAGGAATGTTCCACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCYIETI*RNVPPL Trigger: GAGGGGTGGAACATTCCTGCAAATGGTTTCAATATA...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000681157.1 |
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| CDS-3UTR TCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTCCCATGACAATTATTTaGGTTGCCATAGTAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCPMTII*VAIVVT Trigger: TGTAACTACTATGGCAACTCAAATAATTGTCATGGG...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR TCA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTGACATCTGCATATATTaGAACCATTTGCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: IHGNRVTSISIRCHTHHCDICIY*NHLQEC Trigger: ACATTCCTGCAAATGGTTTCAATATATGCAGATGTC...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000681157.1 |
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| CDS GCA 90 bp | GGGCCTGCTGTGCACTGCTCTGATGAGGCATTCCACTGGGGCAATTaGCTACCTGGGAGTGCTCTCAGGATCTGCTTCACTCAAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GPAVHCSDEAFHWGN*LPGSALRICFTQAG Trigger: GCCAGCTTGAGTGAAGCAGATCCTGAGAGCACTCCCAGGTAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS CCA 90 bp | CCTCCACAGGGGCCTGCTGTGCACTGCTCTGATGAGGCATTCCACTaGGGCAATTGCCTACCTGGGAGTGCTCTCAGGATCTGCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: PPQGPAVHCSDEAFH*GNCLPGSALRICFT Trigger: AGTGAAGCAGATCCTGAGAGCACTCCCAGGTAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 90 bp | GTGTTCAGCCACTGCATTGATCCTCCACAGGGGCCTGCTGTGCACTaGTCTGATGAGGCATTCCACTGGGGCAATTGCCTACCTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VFSHCIDPPQGPAVH*SDEAFHWGNCLPGS Trigger: ACTCCCAGGTAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 90 bp | GATGTCCGGACTCCAAGTGCCAGTTCCTTCATGGTGTTCAGCCACTaGATTGATCCTCCACAGGGGCCTGCTGTGCACTGCTCTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: DVRTPSASSFMVFSH*IDPPQGPAVHCSDE Trigger: CTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGAACACCATGAAGGAACTGGCACTTGGAGTCCGGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATGAAGGAAAAAGCACTTaGGTCCCCATAGGTAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PDIHGNRVTSISIRCHTHEGKST*VPIGRR Trigger: TCTCCTACCTATGGGGACCAAAGTGCTTTTTCCTTC...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATGCCAAGCTAAATGTGTaGATTAAGATCCCTGATGCA | + |
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Preference number: 5 (lower is better) Translates to: PDIHGNRVTSISIRCHTHAKLNV*IKIPDA Trigger: TGCATCAGGGATCTTAATCAACACATTTAGCTTGGC...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATTTGTCTGTTGATCTTTaGGTGGCCTCAAACCTCATT | + |
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Preference number: 5 (lower is better) Translates to: PDIHGNRVTSISIRCHTHLSVDL*VASNLI Trigger: AATGAGGTTTGAGGCCACCAAAAGATCAACAGACAA...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR CAA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTGAAGGAAAAAGCACTTaGGTCCCCATAGGTAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IHGNRVTSISIRCHTHHCEGKST*VPIGRR Trigger: TCTCCTACCTATGGGGACCAAAGTGCTTTTTCCTTC...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR CAA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTGCCAAGCTAAATGTGTaGATTAAGATCCCTGATGCA | + |
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Preference number: 5 (lower is better) Translates to: IHGNRVTSISIRCHTHHCAKLNV*IKIPDA Trigger: TGCATCAGGGATCTTAATCAACACATTTAGCTTGGC...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATTCCCATGACAATTATTaGAGTTGCCATAGTAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: PDIHGNRVTSISIRCHTHSHDNY*SCHSSY Trigger: GTAACTACTATGGCAACTCAAATAATTGTCATGGGA...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR CAA 90 bp | CCCGATATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCTATCAGTATCGAAGTaGGATACTGGTAATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PDIHGNRVTSISIRCHTHLSVSK*DTGNFS Trigger: TGAGAAATTACCAGTATCCAACTTCGATACTGATAG...ATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTATATCGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS-3UTR CAA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTTCCCATGACAATTATTaGAGTTGCCATAGTAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: IHGNRVTSISIRCHTHHCSHDNY*SCHSSY Trigger: GTAACTACTATGGCAACTCAAATAATTGTCATGGGA...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000527056.5 ENST00000529950.2 |
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| CDS-3UTR CAA 90 bp | ATACACGGAAATAGGGTTACTTCCATAAGTATTAGATGCCATACACATCATTGTCTATCAGTATCGAAGTaGGATACTGGTAATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: IHGNRVTSISIRCHTHHCLSVSK*DTGNFS Trigger: TGAGAAATTACCAGTATCCAACTTCGATACTGATAG...ACAATGATGTGTATGGCATCTAATACTTATGGAAGTAACCCTATTTCCGTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000343968.8 ENST00000529950.2 ENST00000681157.1 |
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| CDS CCA 72 bp | ACCTGGGAGTGCTCTCAGGATCTGCTTCACTCAAGCTaGCTGGAGTCCCCCTCAGGTATGCTCCACAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TWECSQDLLHSS*LESPSGMLHRA Trigger: TGCCCTGTGGAGCATACCTGAGGGGGACTCCAGCCAGCTTGAGTGAAGCAGATCCTGAGAGCACTCCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680560.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS CCA 72 bp | GGGCCTGCTGTGCACTGCTCTGATGAGGCATTCCACTaGGGCAATTGCCTACCTGGGAGTGCTCTCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: GPAVHCSDEAFH*GNCLPGSALRI Trigger: GATCCTGAGAGCACTCCCAGGTAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS CAA 90 bp | TCCGGACTCCAAGTGCCAGTTCCTTCATGGTGTTCAGCCACTGCATaGATCCTCCACAGGGGCCTGCTGTGCACTGCTCTGATGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SGLQVPVPSWCSATA*ILHRGLLCTALMRH Trigger: ATGCCTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGAACACCATGAAGGAACTGGCACTTGGAGTCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 72 bp | CACTGCATTGATCCTCCACAGGGGCCTGCTGTGCACTaGTCTGATGAGGCATTCCACTGGGGCAATTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: HCIDPPQGPAVH*SDEAFHWGNCL Trigger: TAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 72 bp | TCAGCCACTGCATTGATCCTCCACAGGGGCCTGCTGTaGACTGCTCTGATGAGGCATTCCACTGGGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: SATALILHRGLL*TALMRHSTGAI Trigger: AATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 72 bp | ACTCCAAGTGCCAGTTCCTTCATGGTGTTCAGCCACTaGATTGATCCTCCACAGGGGCCTGCTGTGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: TPSASSFMVFSH*IDPPQGPAVHC Trigger: GCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGAACACCATGAAGGAACTGGCACTTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS CAA 72 bp | CAAGTGCCAGTTCCTTCATGGTGTTCAGCCACTGCATaGATCCTCCACAGGGGCCTGCTGTGCACTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QVPVPSWCSATA*ILHRGLLCTAL Trigger: CAGAGCAGTGCACAGCAGGCCCCTGTGGAGGATCAATGCAGTGGCTGAACACCATGAAGGAACTGGCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680757.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS GCA 72 bp | GTGCACTGCTCTGATGAGGCATTCCACTGGGGCAATTaGCTACCTGGGAGTGCTCTCAGGATCTGCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: VHCSDEAFHWGN*LPGSALRICFT Trigger: AGTGAAGCAGATCCTGAGAGCACTCCCAGGTAGGCAATTGCCCCAGTGGAATGCCTCATCAGAGCAGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000649552.2 ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680537.1 ENST00000680560.1 ENST00000680935.1 ENST00000681288.1 ENST00000681406.1 |
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| CDS CCA 72 bp | GGTCTTGATCAATTGAGCAAGCAGGGGGTATGTGACTaGGGGCTGCATGCACCAGTAATCAGAACAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: GLDQLSKQGVCD*GLHAPVIRTEQ Trigger: CTGTTCTGTTCTGATTACTGGTGCATGCAGCCCCCAGTCACATACCCCCTGCTTGCTCAATTGATCAAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000679553.1 ENST00000680935.1 |
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| CDS CAA 72 bp | CACCTAAGGAGCTGTCTCGACCATCCATTAATCACCTaGTTTCCTGGTCAGGGAACCAAGAAATGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLRSCLDHPLIT*FPGQGTKKCSR Trigger: CCTGCTACATTTCTTGGTTCCCTGACCAGGAAACAAGGTGATTAATGGATGGTCGAGACAGCTCCTTAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000679385.1 ENST00000679553.1 ENST00000680301.1 ENST00000680935.1 ENST00000681406.1 |
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| CDS CAA 72 bp | GTTCAAGAGAGATTTGAAGATGCTACATCGCTTGATTaGAAGGTAGAAGATGGGATGACAAACCAAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: VQERFEDATSLD*KVEDGMTNQAT Trigger: TGTTGCTTGGTTTGTCATCCCATCTTCTACCTTCAAATCAAGCGATGTAGCATCTTCAAATCTCTCTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529991.2 |
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