RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MS4A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149516

Ensembl transcript IDs: ENST00000278865.8, ENST00000358152.6, ENST00000395032.6, ENST00000525686.1, ENST00000526199.1, ENST00000528298.5, ENST00000534744.1

Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGCAGTAGAGACACCATGCCATTTGATATGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTGATGAAGAGTGACAACTCCTTAATG +
Preference number: 1 (lower is better)
Translates to: SAVETPCHLIWSPCN*IGPVTLMKSDNSLM
Trigger: CATTAAGGAGTTGTCACTCTTCATCAGAGTCACCGGACCTATGCAATTACATGGGCTCCATATCAAATGGCATGGTGTCTCTACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR TCA 90 bp CTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGGTCAAATATTCATGCTCTCAGAATT +
Preference number: 1 (lower is better)
Translates to: LYEQAYVLLSLWVKL*VTGDLRSNIHALRI
Trigger: AATTCTGAGAGCATGAATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
3UTR CCA 90 bp TTATACCGCCTTCCTTCCTTAAACCTCATAAAGCAATGGAGTAGGTaGATAAGAAGAAATAGAACCAATTTCTGGAAACAACTTTGGAGT +
Preference number: 1 (lower is better)
Translates to: LYRLPSLNLIKQWSR*IRRNRTNFWKQLWS
Trigger: ACTCCAAAGTTGTTTCCAGAAATTGGTTCTATTTCTTCTTATCCACCTACTCCATTGCTTTATGAGGTTTAAGGAAGGAAGGCGGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR CCA 90 bp AGTTCTCTACTTTACAGTTTCCCATTGTCCTTTGAAGAACACATTTaGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTACATAT +
Preference number: 1 (lower is better)
Translates to: SSLLYSFPLSFEEHI*ACSQTRQHKSSFTY
Trigger: ATATGTAAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAAGGACAATGGGAAACTGTAAAGTAGAGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR TCA 90 bp AATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCAGAATTTaGACCCAGATGTGTCAGATTCTAAAGGCCTTATTCTTTAGTTCT +
Preference number: 1 (lower is better)
Translates to: NLPMFIQVISDSFRI*TQMCQILKALFFSS
Trigger: AGAACTAAAGAATAAGGCCTTTAGAATCTGACACATCTGGGTTCAAATTCTGAAACTGTCACTTATTACCTGTATGAACATGGGCAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR-3UTR TCA 90 bp CACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGAGAATCAGCTTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGG +
Preference number: 2 (lower is better)
Translates to: HMAMVEMVTHNSSKVRISLWVKL*VTGDLR
Trigger: CCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAA...GCTGATTCTCACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR-3UTR TCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGG +
Preference number: 2 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMLWVKL*VTGDLR
Trigger: CCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAA...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR-3UTR TCA 90 bp GCATTGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGAGACACCATGCCATTTaGTATGGAGCCCATGTAATT +
Preference number: 2 (lower is better)
Translates to: ALHHMAMVEMVTHNSSKVRHHAI*YGAHVI
Trigger: AATTACATGGGCTCCATATCAAATGGCATGGTGTCT...CACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR CAA 90 bp TTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACAGCAGTTTGCATaGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGC +
Preference number: 2 (lower is better)
Translates to: LGGEEISSLELQQFA*HHMAMVEMVTHNSS
Trigger: GCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR-3UTR TCA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTTTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGG +
Preference number: 2 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFLWVKL*VTGDLR
Trigger: CCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAA...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR-3UTR TCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATATTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGG +
Preference number: 2 (lower is better)
Translates to: SFHTHDTQIGFIVRRERILWVKL*VTGDLR
Trigger: CCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAA...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR-3UTR CCA 90 bp CAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 2 (lower is better)
Translates to: QGSCDWCHDRRIELYEQAEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...AGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR-3UTR TCA 90 bp TTCTTGATTACACAGAATTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACAGCGACTCTGATGAAGAGTaGCAACTCCTTAATGACTGG +
Preference number: 2 (lower is better)
Translates to: FLITQNWEVRKFPLLNYSDSDEE*QLLNDW
Trigger: CCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTC...GCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAATCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 2 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR CAA 90 bp AGGCCTTATTCTTTAGTTCTCTACTTTACAGTTTCCCATTGTCCTTaGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAAT +
Preference number: 2 (lower is better)
Translates to: RPYSLVLYFTVSHCP*KNTFGLALRLANIN
Trigger: ATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAAGGACAATGGGAAACTGTAAAGTAGAGAACTAAAGAATAAGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR CAA 90 bp ATTCTAAAGGCCTTATTCTTTAGTTCTCTACTTTACAGTTTCCCATaGTCCTTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAA +
Preference number: 2 (lower is better)
Translates to: ILKALFFSSLLYSFP*SFEEHIWACSQTRQ
Trigger: TTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAAGGACAATGGGAAACTGTAAAGTAGAGAACTAAAGAATAAGGCCTTTAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR-3UTR CCA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 2 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
3UTR-3UTR GCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAAGGTTCTTGTGATTGGTaGCATGATAGAAGGATTGAG +
Preference number: 2 (lower is better)
Translates to: INHHLHIRACVSSSSSLKGSCDW*HDRRIE
Trigger: CTCAATCCTTCTATCATGGCACCAATCACAAGAACC...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR-3UTR GCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCGGTTCTTGTGATTGGTaGCATGATAGAAGGATTGAG +
Preference number: 2 (lower is better)
Translates to: SERLDNLPMFIQVISDSFGSCDW*HDRRIE
Trigger: CTCAATCCTTCTATCATGGCACCAATCACAAGAACC...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR-3UTR CCA 90 bp CAGATGTGTCAGATTCTAAAGGCCTTATTCTTTAGTTCTCTACTTTACAGTTTCCATTTTTCTTCCTACTaGGCGGTCAGAAGTTGGATT +
Preference number: 2 (lower is better)
Translates to: QMCQILKALFFSSLLYSFHFSSY*AVRSWI
Trigger: AATCCAACTTCTGACCGCCCAGTAGGAAGAAAAATG...GAAACTGTAAAGTAGAGAACTAAAGAATAAGGCCTTTAGAATCTGACACATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR-3UTR CCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCCAAGGTTCTTGTGATTaGTGCCATGATAGAAGGATT +
Preference number: 2 (lower is better)
Translates to: SERLDNLPMFIQVISDSFQGSCD*CHDRRI
Trigger: AATCCTTCTATCATGGCACCAATCACAAGAACCTTG...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
3UTR GCA 72 bp GAGACACCATGCCATTTGATATGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTGATGAAGAGTGACAAC +
Preference number: 3 (lower is better)
Translates to: ETPCHLIWSPCN*IGPVTLMKSDN
Trigger: GTTGTCACTCTTCATCAGAGTCACCGGACCTATGCAATTACATGGGCTCCATATCAAATGGCATGGTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR-3UTR CAA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGTTACAGCAGTTTGCATaGCACCACATGGCTATGGTA +
Preference number: 3 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVLQQFA*HHMAMV
Trigger: TACCATAGCCATGTGGTGCAATGCAAACTGCTGTAA...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR-3UTR CAA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGTTGAATTACAGCAGTTaGCATTGCACCACATGGCTA +
Preference number: 3 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVLNYSS*HCTTWL
Trigger: TAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAA...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
3UTR TCA 72 bp CAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGGTCAAATATTCATGCT +
Preference number: 3 (lower is better)
Translates to: QAYVLLSLWVKL*VTGDLRSNIHA
Trigger: AGCATGAATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAAACTCAGGAGAACATAAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
3UTR TCA 72 bp ATGTTCATACAGGTAATAAGTGACAGTTTCAGAATTTaGACCCAGATGTGTCAGATTCTAAAGGCCTTATTC +
Preference number: 3 (lower is better)
Translates to: MFIQVISDSFRI*TQMCQILKALF
Trigger: GAATAAGGCCTTTAGAATCTGACACATCTGGGTTCAAATTCTGAAACTGTCACTTATTACCTGTATGAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp GCATTGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGCTGGTCCCGCCTCACTaGCTGGGGTACCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALHHMAMVEMVTHNSSKVLVPPH*LGYHGQ
Trigger: CTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAG...CACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGTCCCGCCTCACTGCCTaGGGTACCATGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVSRLTA*GTMGRG
Trigger: GCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGA...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
CDS-3UTR TCA 90 bp CAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTACCATGGGCAGAGGCTaGCCCCAGCTCTGCATTATC +
Preference number: 4 (lower is better)
Translates to: QGSCDWCHDRRIELYEQATMGRG*PQLCII
Trigger: GATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGT...AGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp CACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGAGAATCAGCACCATGGGCAGAGGCTaGCCCCAGCTCTGCATTATC +
Preference number: 4 (lower is better)
Translates to: HMAMVEMVTHNSSKVRISTMGRG*PQLCII
Trigger: GATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGT...GCTGATTCTCACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGGGAGGCTTCAGGCTTTaGCAGACGGCTTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKGGFRL*QTAFLP
Trigger: TGGGAGGAAAGCCGTCTGCCAAAGCCTGAAGCCTCC...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGGGAGGCTTCAGGCTTTaGCAGACGGCTTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEGGFRL*QTAFLP
Trigger: TGGGAGGAAAGCCGTCTGCCAAAGCCTGAAGCCTCC...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAGTATTCAGCTCTTCTaGTCCCGCCTCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVSIQLF*SRLTAW
Trigger: CCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACT...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
CDS-3UTR GCA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAACTGGTCCCGCCTCACTaGCTGGGGTACCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKLVPPH*LGYHGQ
Trigger: CTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAG...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAACTGGTCCCGCCTCACTaGCTGGGGTACCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: INHHLHIRACVSSSSSLKLVPPH*LGYHGQ
Trigger: CTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAG...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAATCCCGCCTCACTGCCTaGGGTACCATGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKSRLTA*GTMGRG
Trigger: GCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGA...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp GTATTCTTGATTACACAGAATTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACTCCCGCCTCACTGCCTaGGGTACCATGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VFLITQNWEVRKFPLLNYSRLTA*GTMGRG
Trigger: GCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGA...GTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAATCAAGAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR GCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGTGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVWSPCN*IGPVTL
Trigger: CAGAGTCACCGGACCTATGCAATTACATGGGCTCCA...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR GCA 90 bp AGCAAGGTGAGAATCAGCAGTAGAGACACCATGCCATTTGATATGGAGCCCATGGCAGTAGAGACACCATaGCATTTGATATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SKVRISSRDTMPFDMEPMAVETP*HLIWSP
Trigger: TGGGCTCCATATCAAATGGCATGGTGTCTCTACTGC...CATGGGCTCCATATCAAATGGCATGGTGTCTCTACTGCTGATTCTCACCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp AGCAAGGTGAGAATCAGCAGTAGAGACACCATGCCATTTGATATGGAGCCCATGCATTGGGGTTGTTTATaGCTTGGAGGCTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SKVRISSRDTMPFDMEPMHWGCL*LGGFRL
Trigger: AAGCCTGAAGCCTCCAAGCCATAAACAACCCCAATG...CATGGGCTCCATATCAAATGGCATGGTGTCTCTACTGCTGATTCTCACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GCTATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCAGGGTTGTTTATGGCTTaGAGGCTTCAGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: AIFSERKAVPTSAIVALAGLFMA*RLQALA
Trigger: TGCCAAAGCCTGAAGCCTCCAAGCCATAAACAACCC...TGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGCATTGGGGTTGTTTATaGCTTGGAGGCTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVHWGCL*LGGFRL
Trigger: AAGCCTGAAGCCTCCAAGCCATAAACAACCCCAATG...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
CDS-3UTR TCA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGGACTCTGATGAAGAGTaGCAACTCCTTAATGACTGG +
Preference number: 4 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKDSDEE*QLLNDW
Trigger: CCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTC...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR TCA 90 bp CACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGAGAATCAGCGACTCTGATGAAGAGTaGCAACTCCTTAATGACTGG +
Preference number: 4 (lower is better)
Translates to: HMAMVEMVTHNSSKVRISDSDEE*QLLNDW
Trigger: CCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTC...GCTGATTCTCACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR TCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGGTTCCAGCAGTTCACTaGAATAAAATCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVVPAVH*NKIPEP
Trigger: AGGCTCAGGGATTTTATTTCAGTGAACTGCTGGAAC...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGTGTGGGTTTTATCCCTaGTACAACAGACAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKCGFYP*YNRQGS
Trigger: GGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR CCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGCATTGGGGTTGTTTATaGCTTGGAGGCTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMHWGCL*LGGFRL
Trigger: AAGCCTGAAGCCTCCAAGCCATAAACAACCCCAATG...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp ATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCAATGTTCGTGGGAGGCCATTaGGGTTGTTTATGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IFSERKAVPTSAIVALAMFVGGH*GCLWLG
Trigger: TCCAAGCCATAAACAACCCCAATGGCCTCCCACGAA...CATTGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMALSTS*EAIGVV
Trigger: AACAACCCCAATGGCCTCCCACGAAGTTGATAATGC...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEALSTS*EAIGVV
Trigger: AACAACCCCAATGGCCTCCCACGAAGTTGATAATGC...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTGAACTACAGAACTTaGAGGCTTCAGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIELNYRT*RLQALA
Trigger: TGCCAAAGCCTGAAGCCTCCAAGTTCTGTAGTTCAG...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395032.6
CDS-3UTR TCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCACCATGGGCAGAGGCTaGCCCCAGCTCTGCATTATC +
Preference number: 4 (lower is better)
Translates to: SERLDNLPMFIQVISDSFTMGRG*PQLCII
Trigger: GATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGT...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGGACTCTGATGAAGAGTaGCAACTCCTTAATGACTGG +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMDSDEE*QLLNDW
Trigger: CCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTC...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp GTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCAGACACCATGCCATTTaGTATGGAGCCCATGTAATT +
Preference number: 4 (lower is better)
Translates to: VSQTSKVLVIGAMIEGLSRHHAI*YGAHVI
Trigger: AATTACATGGGCTCCATATCAAATGGCATGGTGTCT...GCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGAGACACCATGCCATTTaGTATGGAGCCCATGTAATT +
Preference number: 4 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKRHHAI*YGAHVI
Trigger: AATTACATGGGCTCCATATCAAATGGCATGGTGTCT...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR TCA 90 bp GTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCATAATTCCAGCAAGGTaGGAATCAGCAGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VSQTSKVLVIGAMIEGLSIIPAR*ESAVET
Trigger: TGTCTCTACTGCTGATTCTCACCTTGCTGGAATTAT...GCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp GCATTGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGTTAAGGAGGTATTCTTaGTTACACAGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALHHMAMVEMVTHNSSKVLRRYS*LHRIGR
Trigger: CCTCCCAATTCTGTGTAATCAAGAATACCTCCTTAA...CACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR TCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGAACAGACAAGGTTCCTaGACTACAGAACCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMNRQGS*TTEPKN
Trigger: GTTCTTGGGTTCTGTAGTTCAGGAACCTTGTCTGTT...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358152.6
CDS-3UTR GCA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTGCAGTAGAGACACCATaGCATTTGATATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFAVETP*HLIWSP
Trigger: TGGGCTCCATATCAAATGGCATGGTGTCTCTACTGC...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR GCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGGGTTCTTGTGATTGGTaGCATGATAGAAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVGSCDW*HDRRIE
Trigger: CTCAATCCTTCTATCATGGCACCAATCACAAGAACC...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp ATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCAATGGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: IFSERKAVPTSAIVALAMALSTS*EAIGVV
Trigger: AACAACCCCAATGGCCTCCCACGAAGTTGATAATGC...CATTGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAAAGTATTCAGCTCTTCTaGTCCCGCCTCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: INHHLHIRACVSSSSSLKSIQLF*SRLTAW
Trigger: CCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACT...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAAAGTATTCAGCTCTTCTaGTCCCGCCTCACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKSIQLF*SRLTAW
Trigger: CCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACT...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp GCTATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCACTGGTGATCCATCTATaGGCTGGTAGACAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: AIFSERKAVPTSAIVALALVIHL*AGRQKY
Trigger: ATACTTCTGTCTACCAGCCCATAGATGGATCACCAG...TGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGCATTTTTCTTCCTACTaGGCGGTCAGAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVHFSSY*AVRSWI
Trigger: AATCCAACTTCTGACCGCCCAGTAGGAAGAAAAATG...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp CAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGTTTGAAGAACACATTTaGGCTTGCTCTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: QTSKVLVIGAMIEGLSFTFEEHI*ACSQTR
Trigger: GCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA...CGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp CAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGTTTCTGATAATCTGGTaGTCCATCTATGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QTSKVLVIGAMIEGLSFTFLIIW*SIYGLV
Trigger: TACCAGCCCATAGATGGATCACCAGATTATCAGAAA...CGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGAGACACCATGCCATTTaGTATGGAGCCCATGTAATT +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMRHHAI*YGAHVI
Trigger: AATTACATGGGCTCCATATCAAATGGCATGGTGTCT...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp CAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGATAATTCCAGCAAGGTaGGAATCAGCAGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: QTSKVLVIGAMIEGLSFTIIPAR*ESAVET
Trigger: TGTCTCTACTGCTGATTCTCACCTTGCTGGAATTAT...CGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGATAATTCCAGCAAGGTaGGAATCAGCAGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEIIPAR*ESAVET
Trigger: TGTCTCTACTGCTGATTCTCACCTTGCTGGAATTAT...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTGTTCCAGCAGTTCACTaGAATAAAATCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFVPAVH*NKIPEP
Trigger: AGGCTCAGGGATTTTATTTCAGTGAACTGCTGGAAC...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGTTTCCCATTGTCCTTTaGAGAACACATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEFPIVL*RTHLGL
Trigger: CAAGCCCAAATGTGTTCTTCAAAGGACAATGGGAAA...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATATGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQIWSPCN*IGPVTL
Trigger: CAGAGTCACCGGACCTATGCAATTACATGGGCTCCA...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR GCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATATGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: SFHTHDTQIGFIVRRERIWSPCN*IGPVTL
Trigger: CAGAGTCACCGGACCTATGCAATTACATGGGCTCCA...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATAGGGTTGTTTATGGCTTaGAGGCTTCAGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQIGLFMA*RLQALA
Trigger: TGCCAAAGCCTGAAGCCTCCAAGCCATAAACAACCC...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAGGGTTGTTTATGGCTTaGAGGCTTCAGGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTEGLFMA*RLQALA
Trigger: TGCCAAAGCCTGAAGCCTCCAAGCCATAAACAACCC...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATAGCTGCATTCAGGATCTaGATGGCCCCAAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQIAAFRI*MAPRTC
Trigger: ACAAGTTCTTGGGGCCATCCAGATCCTGAATGCAGC...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR CCA 90 bp GTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCAAGTGCTTTTGGAAGTaGTATGGGTATTGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VSQTSKVLVIGAMIEGLSKCFWK*YGYCKE
Trigger: TTCCTTGCAATACCCATACCACTTCCAAAAGCACTT...GCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR CCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGGTATCCATGTTCTTGTaGGTTTTATCCCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVVSMFL*VLSLLQ
Trigger: TTGTAGCAGGGATAAAACCCACAAGAACATGGATAC...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR CCA 90 bp CACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGAGAATCAGCCCATGCCATTTGATATaGAGCCCATGTAATTGCATA +
Preference number: 4 (lower is better)
Translates to: HMAMVEMVTHNSSKVRISPCHLI*SPCNCI
Trigger: TATGCAATTACATGGGCTCCATATCAAATGGCATGG...GCTGATTCTCACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp GCATTGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGTGGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: ALHHMAMVEMVTHNSSKVEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...CACCTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR TCA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGGGAAATTTCCTCTCTTaGATTACAGCAGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVGNFLS*ITAVCI
Trigger: AATGCAAACTGCTGTAATTCAAGAGAGGAAATTTCC...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR TCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTAAGGAGGTATTCTTaGTTACACAGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMLRRYS*LHRIGR
Trigger: CCTCCCAATTCTGTGTAATCAAGAATACCTCCTTAA...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATTGTGGGTGAAGCTCTaGGTCACTGGAGATTTAAGG +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKLWVKL*VTGDLR
Trigger: CCTTAAATCTCCAGTGACTCAGAGCTTCACCCACAA...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTTTTCCCATTGTCCTTTaGAGAACACATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFFPIVL*RTHLGL
Trigger: CAAGCCCAAATGTGTTCTTCAAAGGACAATGGGAAA...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp GGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGACAGTTTCAGAATTTaGACCCAGATGTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: GSCDWCHDRRIELYEQAYDSFRI*TQMCQI
Trigger: AATCTGACACATCTGGGTTCAAATTCTGAAACTGTC...ATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATAAGCCAGAATCATTGCTaGATTCAGGATCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQISQNHC*IQDLDG
Trigger: GCCATCCAGATCCTGAATGCAGCAATGATTCTGGCT...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR CCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATTCGTGGGAGGCCATTaGGGTTGTTTATGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: INHHLHIRACVSSSSSLKFVGGH*GCLWLG
Trigger: TCCAAGCCATAAACAACCCCAATGGCCTCCCACGAA...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGGTATCCATGTTCTTGTaGGTTTTATCCCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMVSMFL*VLSLLQ
Trigger: TTGTAGCAGGGATAAAACCCACAAGAACATGGATAC...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp AGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCAATGTTCATTGTATCCATGTTCTTGTaGGTTTTATCCCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SERKAVPTSAIVALAMFIVSMFL*VLSLLQ
Trigger: TTGTAGCAGGGATAAAACCCACAAGAACATGGATAC...AATGAACATTGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCCATGCCATTTGATATaGAGCCCATGTAATTGCATA +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEPCHLI*SPCNCI
Trigger: TATGCAATTACATGGGCTCCATATCAAATGGCATGG...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp AGTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCAAGGTTCTTGTGATTaGTGCCATGATAGAAGGATT +
Preference number: 4 (lower is better)
Translates to: SQSNVQGSCDWCHDRRIEQGSCD*CHDRRI
Trigger: AATCCTTCTATCATGGCACCAATCACAAGAACCTTG...CTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp GGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATCAAGGTTCTTGTGATTaGTGCCATGATAGAAGGATT +
Preference number: 4 (lower is better)
Translates to: GSCDWCHDRRIELYEQAYQGSCD*CHDRRI
Trigger: AATCCTTCTATCATGGCACCAATCACAAGAACCTTG...ATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp TATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAGACTCTGATGAAGAGTaGCAACTCCTTAATGACTGG +
Preference number: 4 (lower is better)
Translates to: YPRMPKEIYLSFHTHDTQDSDEE*QLLNDW
Trigger: CCAGTCATTAAGGAGTTGTCACTCTTCATCAGAGTC...TTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp GCTATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCACTGGCAGGAAATTTCCTCTCTTaGATTACAGCAGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: AIFSERKAVPTSAIVALAGNFLS*ITAVCI
Trigger: AATGCAAACTGCTGTAATTCAAGAGAGGAAATTTCC...TGCCAGTGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR GCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATATGTGGGTTTTATCCCTaGTACAACAGACAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SFHTHDTQIGFIVRRERICGFYP*YNRQGS
Trigger: GGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR GCA 90 bp TATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAATGTGGGTTTTATCCCTaGTACAACAGACAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: YPRMPKEIYLSFHTHDTQCGFYP*YNRQGS
Trigger: GGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA...TTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR GCA 90 bp TTAACTGCTATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCATGTGGGTTTTATCCCTaGTACAACAGACAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LTAIFSERKAVPTSAIVACGFYP*YNRQGS
Trigger: GGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA...TGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGCAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR GCA 90 bp GAAATAAAATCCCTGAGCCTTAACCCTCCCATCTCAAATACAGTGAAAATTTATTGGAGCCCATGTAATTaGATAGGTCCGGTGACTCTG +
Preference number: 4 (lower is better)
Translates to: EIKSLSLNPPISNTVKIYWSPCN*IGPVTL
Trigger: CAGAGTCACCGGACCTATGCAATTACATGGGCTCCA...ATAAATTTTCACTGTATTTGAGATGGGAGGGTTAAGGCTCAGGGATTTTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCTTCGTGGGAGGCCATTaGGGTTGTTTATGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SERLDNLPMFIQVISDSFFVGGH*GCLWLG
Trigger: TCCAAGCCATAAACAACCCCAATGGCCTCCCACGAA...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATACTGGTGATCCATCTATaGGCTGGTAGACAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SFHTHDTQIGFIVRRERILVIHL*AGRQKY
Trigger: ATACTTCTGTCTACCAGCCCATAGATGGATCACCAG...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp CAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: QTSKVLVIGAMIEGLSFTEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...CGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp TTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTTTTGAAGAACACATTTaGGCTTGCTCTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: FEEHIWACSQTRQHKSSFFEEHI*ACSQTR
Trigger: GCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA...AAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATATTTCTGATAATCTGGTaGTCCATCTATGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQIFLIIW*SIYGLV
Trigger: TACCAGCCCATAGATGGATCACCAGATTATCAGAAA...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAAACAGACAAGGTTCCTaGACTACAGAAAAACACAGC +
Preference number: 4 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTENRQGS*TTEKHS
Trigger: GCTGTGTTTTTCTGTAGTTCAGGAACCTTGTCTGTT...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR TCA 90 bp TTCTTGATTACACAGAATTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACAGCAGACACCATGCCATTTaGTATGGAGCCCATGTAATT +
Preference number: 4 (lower is better)
Translates to: FLITQNWEVRKFPLLNYSRHHAI*YGAHVI
Trigger: AATTACATGGGCTCCATATCAAATGGCATGGTGTCT...GCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAATCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR TCA 90 bp TTCTTGATTACACAGAATTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACAGCATAATTCCAGCAAGGTaGGAATCAGCAGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: FLITQNWEVRKFPLLNYSIIPAR*ESAVET
Trigger: TGTCTCTACTGCTGATTCTCACCTTGCTGGAATTAT...GCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAATCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR GCA 90 bp TTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTAAGTGGTATGGGTATTaGAAGGAACCCAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: FEEHIWACSQTRQHKSSFKWYGY*KEPRKT
Trigger: TGTCTTTCTGGGTTCCTTGCAATACCCATACCACTT...AAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR GCA 90 bp GAAATAAAATCCCTGAGCCTTAACCCTCCCATCTCAAATACAGTGAAAATTTATGCAGTAGAGACACCATaGCATTTGATATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EIKSLSLNPPISNTVKIYAVETP*HLIWSP
Trigger: TGGGCTCCATATCAAATGGCATGGTGTCTCTACTGC...ATAAATTTTCACTGTATTTGAGATGGGAGGGTTAAGGCTCAGGGATTTTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR GCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATAGGTTCTTGTGATTGGTaGCATGATAGAAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SFHTHDTQIGFIVRRERIGSCDW*HDRRIE
Trigger: CTCAATCCTTCTATCATGGCACCAATCACAAGAACC...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR GCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAAGGTTCTTGTGATTGGTaGCATGATAGAAGGATTGAG +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKGSCDW*HDRRIE
Trigger: CTCAATCCTTCTATCATGGCACCAATCACAAGAACC...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAACTGGTGATCCATCTATaGGCTGGTAGACAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKLVIHL*AGRQKY
Trigger: ATACTTCTGTCTACCAGCCCATAGATGGATCACCAG...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAACTTTTGGAAGTGGTATaGGTATTGCAAGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: INHHLHIRACVSSSSSLKLLEVV*VLQGTQ
Trigger: CTGGGTTCCTTGCAATACCCATACCACTTCCAAAAG...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR TCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATTAAGGAGGTATTCTTaGTTACACAGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKLRRYS*LHRIGR
Trigger: CCTCCCAATTCTGTGTAATCAAGAATACCTCCTTAA...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAACCATGCCATTTGATATaGAGCCCATGTAATTGCATA +
Preference number: 4 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTEPCHLI*SPCNCI
Trigger: TATGCAATTACATGGGCTCCATATCAAATGGCATGG...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATACCATGCCATTTGATATaGAGCCCATGTAATTGCATA +
Preference number: 4 (lower is better)
Translates to: SFHTHDTQIGFIVRRERIPCHLI*SPCNCI
Trigger: TATGCAATTACATGGGCTCCATATCAAATGGCATGG...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp TTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTCAAGGTTCTTGTGATTaGTGCCATGATAGAAGGATT +
Preference number: 4 (lower is better)
Translates to: FEEHIWACSQTRQHKSSFQGSCD*CHDRRI
Trigger: AATCCTTCTATCATGGCACCAATCACAAGAACCTTG...AAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAAGGAAATTTCCTCTCTTaGATTACAGCAGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKGNFLS*ITAVCI
Trigger: AATGCAAACTGCTGTAATTCAAGAGAGGAAATTTCC...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR TCA 90 bp ATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAAGACAGTTTCAGAATTTaGACCCAGATGTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: INHHLHIRACVSSSSSLKDSFRI*TQMCQI
Trigger: AATCTGACACATCTGGGTTCAAATTCTGAAACTGTC...TTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAAAAAAAGAAGTGCTTTTaGAAGTGGTATGGGTATTGC +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKKKKCF*KWYGYC
Trigger: GCAATACCCATACCACTTCCAAAAGCACTTCTTTTT...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR CCA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAAGAAGCTCTGAGTCACTaGAGATTTAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: IQECLKKYICPSIPTTHKEALSH*RFKVKY
Trigger: ATATTTGACCTTAAATCTCCAGTGACTCAGAGCTTC...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCCATTTTTCTTCCTACTaGGCGGTCAGAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SERLDNLPMFIQVISDSFHFSSY*AVRSWI
Trigger: AATCCAACTTCTGACCGCCCAGTAGGAAGAAAAATG...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR TCA 90 bp GAAATAAAATCCCTGAGCCTTAACCCTCCCATCTCAAATACAGTGAAAATTTATTTAAGGAGGTATTCTTaGTTACACAGAATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EIKSLSLNPPISNTVKIYLRRYS*LHRIGR
Trigger: CCTCCCAATTCTGTGTAATCAAGAATACCTCCTTAA...ATAAATTTTCACTGTATTTGAGATGGGAGGGTTAAGGCTCAGGGATTTTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CCA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCGTATCCATGTTCTTGTaGGTTTTATCCCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SERLDNLPMFIQVISDSFVSMFL*VLSLLQ
Trigger: TTGTAGCAGGGATAAAACCCACAAGAACATGGATAC...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS GCA 90 bp TGGGCTGGTAGACAGAAGTATTCAGCTCTTCTGGTCCCGCCTCACTaGCTGGGGTACCATGGGCAGAGGCTGACCCCAGCTCTGCATTAT +
Preference number: 5 (lower is better)
Translates to: WAGRQKYSALLVPPH*LGYHGQRLTPALHY
Trigger: ATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACTTCTGTCTACCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000526199.1
ENST00000528298.5
ENST00000534744.1
CDS CCA 90 bp GTACCATGGGCAGAGGCTGACCCCAGCTCTGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTTTATGGCTTGGAGGCTTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: VPWAEADPSSALSTS*EAIGVVYGLEASGF
Trigger: AAAGCCTGAAGCCTCCAAGCCATAAACAACCCCAATGGCCTCCCACGAAGTTGATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000528298.5
CDS-3UTR CAA 90 bp AGCAAGGTGAGAATCAGCAGTAGAGACACCATGCCATTTGATATGGAGCCCATGCTTCGTGGGAGGCCATaGGGGTTGTTTATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SKVRISSRDTMPFDMEPMLRGRP*GLFMAW
Trigger: CCAAGCCATAAACAACCCCAATGGCCTCCCACGAAG...CATGGGCTCCATATCAAATGGCATGGTGTCTCTACTGCTGATTCTCACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CAA 90 bp CAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTCTTCGTGGGAGGCCATaGGGGTTGTTTATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: QGSCDWCHDRRIELYEQALRGRP*GLFMAW
Trigger: CCAAGCCATAAACAACCCCAATGGCCTCCCACGAAG...AGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp GTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTATGCCTCCCAAGTCCACCTaGTCGCAAGTAGGAGACACT +
Preference number: 5 (lower is better)
Translates to: VLVIGAMIEGLSFTSRLMPPKST*SQVGDT
Trigger: AGTGTCTCCTACTTGCGACAAGGTGGACTTGGGAGG...CATAAGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp GATAGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAGAACACATTTGGGCTaGCTCTCAGACTCGCCAACA +
Preference number: 5 (lower is better)
Translates to: DRRIELYEQAYVLLSLWVRTHLG*LSDSPT
Trigger: TGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCT...CACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAACCTCCCAAGTCCACCTaGTCGCAAGTAGGAGACACT +
Preference number: 5 (lower is better)
Translates to: YPRMPKEIYLSFHTHDTQPPKST*SQVGDT
Trigger: AGTGTCTCCTACTTGCGACAAGGTGGACTTGGGAGG...TTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp CCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATAGGGAGGCCATTGGGGTaGTTTATGGCTTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PRMPKEIYLSFHTHDTQIGRPLG*FMAWRL
Trigger: AAGCCTCCAAGCCATAAACAACCCCAATGGCCTCCC...TATTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTGGGAGGCCATTGGGGTaGTTTATGGCTTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: FEEHIWACSQTRQHKSSFGRPLG*FMAWRL
Trigger: AAGCCTCCAAGCCATAAACAACCCCAATGGCCTCCC...AAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TTAACTGCTATATTTAGTGAGAGAAAAGCAGTCCCCACTAGTGCAATTGTAGCAGGGAGGCCATTGGGGTaGTTTATGGCTTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LTAIFSERKAVPTSAIVAGRPLG*FMAWRL
Trigger: AAGCCTCCAAGCCATAAACAACCCCAATGGCCTCCC...TGCTACAATTGCACTAGTGGGGACTGCTTTTCTCTCACTAAATATAGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CAA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAACTTCGTGGGAGGCCATaGGGGTTGTTTATGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTELRGRP*GLFMAW
Trigger: CCAAGCCATAAACAACCCCAATGGCCTCCCACGAAG...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp AGCAAGGTGAGAATCAGCAGTAGAGACACCATGCCATTTGATATGGAGCCCATGTCTGTATCCATGTTCTaGTGGGTTTTATCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: SKVRISSRDTMPFDMEPMSVSMF*WVLSLL
Trigger: TAGCAGGGATAAAACCCACAAGAACATGGATACAGA...CATGGGCTCCATATCAAATGGCATGGTGTCTCTACTGCTGATTCTCACCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CAA 90 bp GTCAGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTACAGCAGTTTGCATaGCACCACATGGCTATGGTA +
Preference number: 5 (lower is better)
Translates to: VSQTSKVLVIGAMIEGLSLQQFA*HHMAMV
Trigger: TACCATAGCCATGTGGTGCAATGCAAACTGCTGTAA...GCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGTTACAGCAGTTTGCATaGCACCACATGGCTATGGTA +
Preference number: 5 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKLQQFA*HHMAMV
Trigger: TACCATAGCCATGTGGTGCAATGCAAACTGCTGTAA...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR CAA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAAGGGGTTGTTTATGGCTaGGAGGCTTCAGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKGVVYG*EASGFG
Trigger: GCCAAAGCCTGAAGCCTCCAAGCCATAAACAACCCC...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp CAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGAGCAGGCTTCTGTATCCATGTTCTaGTGGGTTTTATCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: QGSCDWCHDRRIELYEQASVSMF*WVLSLL
Trigger: TAGCAGGGATAAAACCCACAAGAACATGGATACAGA...AGCCTGCTCGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp TTTGCATTGCACCACATGGCTATGGTAGAGATGGTTACGCATAATTCCAGCAAGGAGACACCATGCCATTaGATATGGAGCCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: FALHHMAMVEMVTHNSSKETPCH*IWSPCN
Trigger: ATTACATGGGCTCCATATCAAATGGCATGGTGTCTC...CTTGCTGGAATTATGCGTAACCATCTCTACCATAGCCATGTGGTGCAATGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS-3UTR CAA 90 bp AGAAGGATTGAGCTTTACGAGCAGGCTTATGTTCTCCTGAGTTTGTGGGTGAAGTTGAATTACAGCAGTTaGCATTGCACCACATGGCTA +
Preference number: 5 (lower is better)
Translates to: RRIELYEQAYVLLSLWVKLNYSS*HCTTWL
Trigger: TAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAA...CTTCACCCACAAACTCAGGAGAACATAAGCCTGCTCGTAAAGCTCAATCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
ENST00000525686.1
CDS-3UTR CAA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATACCTGAACTACAGAACTaGGAGGCTTCAGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SFHTHDTQIGFIVRRERIPELQN*EASGFG
Trigger: GCCAAAGCCTGAAGCCTCCAAGTTCTGTAGTTCAGG...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395032.6
CDS-3UTR CAA 90 bp CAGATGTGTCAGATTCTAAAGGCCTTATTCTTTAGTTCTCTACTTTACAGTTTCCCTCCCAAGTCCACCTaGTCGCAAGTAGGAGACACT +
Preference number: 5 (lower is better)
Translates to: QMCQILKALFFSSLLYSFPPKST*SQVGDT
Trigger: AGTGTCTCCTACTTGCGACAAGGTGGACTTGGGAGG...GAAACTGTAAAGTAGAGAACTAAAGAATAAGGCCTTTAGAATCTGACACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TCAGAGAGATTAGATAATTTGCCCATGTTCATACAGGTAATAAGTGACAGTTTCGGGGTTGTTTATGGCTaGGAGGCTTCAGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SERLDNLPMFIQVISDSFGVVYG*EASGFG
Trigger: GCCAAAGCCTGAAGCCTCCAAGCCATAAACAACCCC...GAAACTGTCACTTATTACCTGTATGAACATGGGCAAATTATCTAATCTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTGAGACACCATGCCATTaGATATGGAGCCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFETPCH*IWSPCN
Trigger: ATTACATGGGCTCCATATCAAATGGCATGGTGTCTC...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTTTACAGCAGTTTGCATaGCACCACATGGCTATGGTA +
Preference number: 5 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFLQQFA*HHMAMV
Trigger: TACCATAGCCATGTGGTGCAATGCAAACTGCTGTAA...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAGAAGTGGTATGGGTATaGCAAGGAACCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTEEVVWV*QGTQKD
Trigger: GTCTTTCTGGGTTCCTTGCAATACCCATACCACTTC...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278865.8
CDS-3UTR CAA 90 bp AGTCAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTTCTGTATCCATGTTCTaGTGGGTTTTATCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: SQTSKVLVIGAMIEGLSFSVSMF*WVLSLL
Trigger: TAGCAGGGATAAAACCCACAAGAACATGGATACAGA...AAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS TCA 90 bp ATTTTGAGTGTTACAGAAGGGTTCAATTCTGTCCATACATTACAATaGCTCTCCACAAATGGGACACCAGGGCAGAGTAACAGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: ILSVTEGFNSVHTLQ*LSTNGTPGQSNRVC
Trigger: ACAAACTCTGTTACTCTGCCCTGGTGTCCCATTTGTGGAGAGTCATTGTAATGTATGGACAGAATTGAACCCTTCTGTAACACTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS-3UTR CAA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATAGAGACACCATGCCATTaGATATGGAGCCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: SFHTHDTQIGFIVRRERIETPCH*IWSPCN
Trigger: ATTACATGGGCTCCATATCAAATGGCATGGTGTCTC...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp TCCTTCCATACCCACGACACACAAATAGGATTTATAGTTAGGAGAGAAAGGATATTACAGCAGTTTGCATaGCACCACATGGCTATGGTA +
Preference number: 5 (lower is better)
Translates to: SFHTHDTQIGFIVRRERILQQFA*HHMAMV
Trigger: TACCATAGCCATGTGGTGCAATGCAAACTGCTGTAA...TATCCTTTCTCTCCTAACTATAAATCCTATTTGTGTGTCGTGGGTATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp CAAACGTCCAAGGTTCTTGTGATTGGTGCCATGATAGAAGGATTGAGCTTTACGATTAAGGAGGTATTCTaGATTACACAGAATTGGGAG +
Preference number: 5 (lower is better)
Translates to: QTSKVLVIGAMIEGLSFTIKEVF*ITQNWE
Trigger: CTCCCAATTCTGTGTAATCAAGAATACCTCCTTAAT...CGTAAAGCTCAATCCTTCTATCATGGCACCAATCACAAGAACCTTGGACGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp GAAATAAAATCCCTGAGCCTTAACCCTCCCATCTCAAATACAGTGAAAATTTATAGAACACATTTGGGCTaGCTCTCAGACTCGCCAACA +
Preference number: 5 (lower is better)
Translates to: EIKSLSLNPPISNTVKIYRTHLG*LSDSPT
Trigger: TGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCT...ATAAATTTTCACTGTATTTGAGATGGGAGGGTTAAGGCTCAGGGATTTTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp CATAAATCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAATCTGTATCCATGTTCTaGTGGGTTTTATCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: HKSSFTYQGMCEFQQFTESVSMF*WVLSLL
Trigger: TAGCAGGGATAAAACCCACAAGAACATGGATACAGA...TTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGATTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAAGAGACACCATGCCATTaGATATGGAGCCCATGTAAT +
Preference number: 5 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKETPCH*IWSPCN
Trigger: ATTACATGGGCTCCATATCAAATGGCATGGTGTCTC...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp ATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATTGAATTACAGCAGTTaGCATTGCACCACATGGCTA +
Preference number: 5 (lower is better)
Translates to: IQECLKKYICPSIPTTHKLNYSS*HCTTWL
Trigger: TAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAA...TTTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp TCATCATTTACATATCAGGGCATGTGTGAGTTCCAGCAGTTCACTGAAATAAAATTGAATTACAGCAGTTaGCATTGCACCACATGGCTA +
Preference number: 5 (lower is better)
Translates to: SSFTYQGMCEFQQFTEIKLNYSS*HCTTWL
Trigger: TAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAA...TTTTATTTCAGTGAACTGCTGGAACTCACACATGCCCTGATATGTAAATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp CAGATGTGTCAGATTCTAAAGGCCTTATTCTTTAGTTCTCTACTTTACAGTTTCTTGAATTACAGCAGTTaGCATTGCACCACATGGCTA +
Preference number: 5 (lower is better)
Translates to: QMCQILKALFFSSLLYSFLNYSS*HCTTWL
Trigger: TAGCCATGTGGTGCAATGCAAACTGCTGTAATTCAA...GAAACTGTAAAGTAGAGAACTAAAGAATAAGGCCTTTAGAATCTGACACATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TATCCAAGAATGCCTAAAGAAATATATCTGTCCTTCCATACCCACGACACACAAATTAAGGAGGTATTCTaGATTACACAGAATTGGGAG +
Preference number: 5 (lower is better)
Translates to: YPRMPKEIYLSFHTHDTQIKEVF*ITQNWE
Trigger: CTCCCAATTCTGTGTAATCAAGAATACCTCCTTAAT...TTGTGTGTCGTGGGTATGGAAGGACAGATATATTTCTTTAGGCATTCTTGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000395032.6
CDS-3UTR CAA 90 bp TTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAACATAAATCATCATTTATTAAGGAGGTATTCTaGATTACACAGAATTGGGAG +
Preference number: 5 (lower is better)
Translates to: FEEHIWACSQTRQHKSSFIKEVF*ITQNWE
Trigger: CTCCCAATTCTGTGTAATCAAGAATACCTCCTTAAT...AAATGATGATTTATGTTGGCGAGTCTGAGAGCAAGCCCAAATGTGTTCTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278865.8
ENST00000358152.6
CDS-3UTR CAA 90 bp TTCTTGATTACACAGAATTGGGAGGTGAGGAAATTTCCTCTCTTGAATTACAGCATTAAGGAGGTATTCTaGATTACACAGAATTGGGAG +
Preference number: 5 (lower is better)
Translates to: FLITQNWEVRKFPLLNYSIKEVF*ITQNWE
Trigger: CTCCCAATTCTGTGTAATCAAGAATACCTCCTTAAT...GCTGTAATTCAAGAGAGGAAATTTCCTCACCTCCCAATTCTGTGTAATCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525686.1
CDS TCA 72 bp TCCCGCCTCACTGCCTGGGGTACCATGGGCAGAGGCTaGCCCCAGCTCTGCATTATCAACTTCGTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: SRLTAWGTMGRG*PQLCIINFVGG
Trigger: GCCTCCCACGAAGTTGATAATGCAGAGCTGGGGTCAGCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000526199.1
ENST00000528298.5
ENST00000534744.1
CDS GCA 72 bp AGACAGAAGTATTCAGCTCTTCTGGTCCCGCCTCACTaGCTGGGGTACCATGGGCAGAGGCTGACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: RQKYSALLVPPH*LGYHGQRLTPA
Trigger: AGCTGGGGTCAGCCTCTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACTTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000526199.1
ENST00000528298.5
ENST00000534744.1
CDS CCA 72 bp GCAGAGGCTGACCCCAGCTCTGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTTTATGGCTTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: AEADPSSALSTS*EAIGVVYGLEA
Trigger: AGCCTCCAAGCCATAAACAACCCCAATGGCCTCCCACGAAGTTGATAATGCAGAGCTGGGGTCAGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000528298.5
CDS CCA 72 bp ATCTATGGGCTGGTAGACAGAAGTATTCAGCTCTTCTaGTCCCGCCTCACTGCCTGGGGTACCATGGGCAGA +
Preference number: 6 (lower is better)
Translates to: IYGLVDRSIQLF*SRLTAWGTMGR
Trigger: TCTGCCCATGGTACCCCAGGCAGTGAGGCGGGACCAGAAGAGCTGAATACTTCTGTCTACCAGCCCATAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278865.8
ENST00000358152.6
ENST00000525686.1
ENST00000526199.1
ENST00000528298.5
ENST00000534744.1
CDS CCA 72 bp GCAGAGGCTGACCCCAGCTCTGCATTATCAACTTCGTaGGAGGCCATTGGGGTTGTTTATGGCTGTGATAGA +
Preference number: 6 (lower is better)
Translates to: AEADPSSALSTS*EAIGVVYGCDR
Trigger: TCTATCACAGCCATAAACAACCCCAATGGCCTCCCACGAAGTTGATAATGCAGAGCTGGGGTCAGCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS CAA 90 bp TGGAGGCTTCAGGCTTTGGCAGACGGCTTTCCTCCCAAGTCCACCTaGTCGCAAGTAGGAGACACTCAGAAAAGATCACTACAGCATCTT +
Preference number: 6 (lower is better)
Translates to: WRLQALADGFPPKST*SQVGDTQKRSLQHL
Trigger: AAGATGCTGTAGTGATCTTTTCTGAGTGTCTCCTACTTGCGACAAGGTGGACTTGGGAGGAAAGCCGTCTGCCAAAGCCTGAAGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358152.6
ENST00000395032.6
ENST00000528298.5
CDS CAA 72 bp CAGGCTTTGGCAGACGGCTTTCCTCCCAAGTCCACCTaGTCGCAAGTAGGAGACACTCAGAAAAGATCACTA +
Preference number: 6 (lower is better)
Translates to: QALADGFPPKST*SQVGDTQKRSL
Trigger: TAGTGATCTTTTCTGAGTGTCTCCTACTTGCGACAAGGTGGACTTGGGAGGAAAGCCGTCTGCCAAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358152.6
ENST00000395032.6
ENST00000528298.5
CDS TCA 72 bp TGTGGGTTTTATCCCTGCTACAACAGACAAGGTTCCTaGACTACAGAACTTGGAGGCTTCAGGCTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: CGFYPCYNRQGS*TTELGGFRLWQ
Trigger: CTGCCAAAGCCTGAAGCCTCCAAGTTCTGTAGTTCAGGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395032.6
CDS CAA 72 bp GCTCTGCATTATCAACTTCGTGGGAGGCCATTGGGGTaGTTTATGGCTGTGATAGAAAAGAAATCCAAAGCC +
Preference number: 6 (lower is better)
Translates to: ALHYQLRGRPLG*FMAVIEKKSKA
Trigger: GGCTTTGGATTTCTTTTCTATCACAGCCATAAACAACCCCAATGGCCTCCCACGAAGTTGATAATGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS TCA 72 bp GTTACAGAAGGGTTCAATTCTGTCCATACATTACAATaGCTCTCCACAAATGGGACACCAGGGCAGAGTAAC +
Preference number: 6 (lower is better)
Translates to: VTEGFNSVHTLQ*LSTNGTPGQSN
Trigger: GTTACTCTGCCCTGGTGTCCCATTTGTGGAGAGTCATTGTAATGTATGGACAGAATTGAACCCTTCTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS CAA 90 bp ACACCAGGGCAGAGTAACAGAGTTTGTACAATATTCAATTCTGTCTaGCCTTGGAGTAGTAGACATCATCGGGTCATTGTAGTAGGCCTT +
Preference number: 6 (lower is better)
Translates to: TPGQSNRVCTIFNSV*PWSSRHHRVIVVGL
Trigger: AAGGCCTACTACAATGACCCGATGATGTCTACTACTCCAAGGCAAGACAGAATTGAATATTGTACAAACTCTGTTACTCTGCCCTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS CCA 72 bp AACAGAGTTTGTACAATATTCAATTCTGTCTTGCCTTaGAGTAGTAGACATCATCGGGTCATTGTAGTAGGC +
Preference number: 6 (lower is better)
Translates to: NRVCTIFNSVLP*SSRHHRVIVVG
Trigger: GCCTACTACAATGACCCGATGATGTCTACTACTCCAAGGCAAGACAGAATTGAATATTGTACAAACTCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS CAA 72 bp CAGAGTAACAGAGTTTGTACAATATTCAATTCTGTCTaGCCTTGGAGTAGTAGACATCATCGGGTCATTGTA +
Preference number: 6 (lower is better)
Translates to: QSNRVCTIFNSV*PWSSRHHRVIV
Trigger: TACAATGACCCGATGATGTCTACTACTCCAAGGCAAGACAGAATTGAATATTGTACAAACTCTGTTACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526199.1
CDS TCA 72 bp TGTGGGTTTTATCCCTGCTACAACAGACAAGGTTCCTaGACTACAGAATATTCATTAAGTGGAAGTAGATTA +
Preference number: 6 (lower is better)
Translates to: CGFYPCYNRQGS*TTEYSLSGSRL
Trigger: TAATCTACTTCCACTTAATGAATATTCTGTAGTTCAGGAACCTTGTCTGTTGTAGCAGGGATAAAACCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525686.1