Pregenerated sensors for MRPS36 (Homo sapiens)
Ensembl gene IDs: ENSG00000134056Ensembl transcript IDs: ENST00000256441.5, ENST00000503793.1, ENST00000512880.5, ENST00000602380.1, ENST00000613100.1, ENST00000618341.1, ENST00000618428.4
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTTAGCTTTGTGAGGCTTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGTGTGGTTTGACTACCTaGACGACCCTACTAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSFVRLYFTIYVPLAQEGCGLTT*TTLLAD Trigger: GTCTGCTAGTAGGGTCGTTCAGGTAGTCAAACCACA...CCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAAGCCTCACAAAGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256441.5 |
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| CDS-3UTR CCA 90 bp | TTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGCCCCATTAAAGTTTCACAATATACGTACCCTTaGCACAGGAGGGGCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: FTSQYTYPWHRRGPIKVSQYTYP*HRRGPI Trigger: AATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTG...TGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000256441.5 ENST00000613100.1 |
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| CDS-3UTR TCA 90 bp | TTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGCCCCATTAAAGTTTCATGTGGTTTGACTACCTaGACGACCCTACTAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FTSQYTYPWHRRGPIKVSCGLTT*TTLLAD Trigger: GTCTGCTAGTAGGGTCGTTCAGGTAGTCAAACCACA...TGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256441.5 ENST00000613100.1 |
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| CDS CCA 90 bp | CAGGCTCAAAGTCCCATCCTCACACACACCCGCGGGCGCCGTCACTaGCCCTCCGCAGAGGCGCGGTCACCGCTCTGCCTCTGCCACCGC | + |
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Preference number: 5 (lower is better) Translates to: QAQSPILTHTRGRRH*PSAEARSPLCLCHR Trigger: GCGGTGGCAGAGGCAGAGCGGTGACCGCGCCTCTGCGGAGGGCCAGTGACGGCGCCCGCGGGTGTGTGTGAGGATGGGACTTTGAGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503793.1 ENST00000512880.5 ENST00000602380.1 ENST00000618341.1 ENST00000618428.4 |
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| CDS GCA 90 bp | ACGGTTGCCGCAAGGCTCGAACCCTCGGCGCCGGACCCACCTCACTaGCCGGTCCAACAGGCTCAAAGTCCCATCCTCACACACACCCGC | + |
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Preference number: 5 (lower is better) Translates to: TVAARLEPSAPDPPH*PVQQAQSPILTHTR Trigger: GCGGGTGTGTGTGAGGATGGGACTTTGAGCCTGTTGGACCGGGCAGTGAGGTGGGTCCGGCGCCGAGGGTTCGAGCCTTGCGGCAACCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503793.1 ENST00000512880.5 ENST00000602380.1 ENST00000618341.1 ENST00000618428.4 |
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| CDS-3UTR CAA 90 bp | TTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGCCCCATTAAAGTTTCAACAATATACGTACCCTaGGCACAGGAGGGGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FTSQYTYPWHRRGPIKVSTIYVP*AQEGPH Trigger: ATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGT...TGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000256441.5 ENST00000613100.1 |
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| CDS-3UTR CAA 90 bp | TTTAGCTTTGTGAGGCTTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGTTCAGGACCTCCACGTaGGATAAATTCCATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FSFVRLYFTIYVPLAQEGFRTST*DKFHFF Trigger: GAAGAAATGGAATTTATCCAACGTGGAGGTCCTGAA...CCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAAGCCTCACAAAGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256441.5 |
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| CDS-3UTR CAA 90 bp | TTTACTTCACAATATACGTACCCTTGGCACAGGAGGGGCCCCATTAAAGTTTCATTCAGGACCTCCACGTaGGATAAATTCCATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FTSQYTYPWHRRGPIKVSFRTST*DKFHFF Trigger: GAAGAAATGGAATTTATCCAACGTGGAGGTCCTGAA...TGAAACTTTAATGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000256441.5 ENST00000613100.1 |
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| CDS GCA 72 bp | CGTCACTGGCCCTCCGCAGAGGCGCGGTCACCGCTCTaGCTCTGCCACCGCCTTTACTCCCCGACGCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: RHWPSAEARSPL*LCHRLYSPTPS Trigger: CGACGGCGTCGGGGAGTAAAGGCGGTGGCAGAGGCAGAGCGGTGACCGCGCCTCTGCGGAGGGCCAGTGACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000503793.1 ENST00000512880.5 ENST00000602380.1 ENST00000618341.1 ENST00000618428.4 |
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| CDS CCA 72 bp | AGTCCCATCCTCACACACACCCGCGGGCGCCGTCACTaGCCCTCCGCAGAGGCGCGGTCACCGCTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SPILTHTRGRRH*PSAEARSPLCL Trigger: GAGGCAGAGCGGTGACCGCGCCTCTGCGGAGGGCCAGTGACGGCGCCCGCGGGTGTGTGTGAGGATGGGACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503793.1 ENST00000512880.5 ENST00000602380.1 ENST00000618341.1 ENST00000618428.4 |
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| CDS GCA 72 bp | GCAAGGCTCGAACCCTCGGCGCCGGACCCACCTCACTaGCCGGTCCAACAGGCTCAAAGTCCCATCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: ARLEPSAPDPPH*PVQQAQSPILT Trigger: TGTGAGGATGGGACTTTGAGCCTGTTGGACCGGGCAGTGAGGTGGGTCCGGCGCCGAGGGTTCGAGCCTTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503793.1 ENST00000512880.5 ENST00000602380.1 ENST00000618341.1 ENST00000618428.4 |
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| CDS GCA 72 bp | GGAGTGTGTGGTTTGACTGCCAAGATGCTGCACGGTTaGCGCAAGGCTCGAACCCTCGGCGCCGGACCCACC | + |
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Preference number: 6 (lower is better) Translates to: GVCGLTAKMLHG*RKARTLGAGPT Trigger: GGTGGGTCCGGCGCCGAGGGTTCGAGCCTTGCGGCAACCGTGCAGCATCTTGGCAGTCAAACCACACACTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503793.1 ENST00000618341.1 |
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| CDS CAA 72 bp | GTGTGTGGTTTGACTACCTGCCAAGATGCTGCACGGTaGCCGCAAGGCTCGAACCCTCGGCGCCGGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: VCGLTTCQDAAR*PQGSNPRRRTH Trigger: GTGGGTCCGGCGCCGAGGGTTCGAGCCTTGCGGCAACCGTGCAGCATCTTGGCAGGTAGTCAAACCACACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512880.5 ENST00000602380.1 ENST00000618428.4 |
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