Pregenerated sensors for MRPS30 (Homo sapiens)
Ensembl gene IDs: ENSG00000112996Ensembl transcript IDs: ENST00000230914.4, ENST00000507110.6, ENST00000508129.1, ENST00000515647.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCACAATCGGCGGGTACCGCGCGACGGGGGTCGCCGCGACGTCTTaGCAGGTCGTTTCTGTAGCCGTGGCGGCGGCATTAGCCGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: ATIGGYRATGVAATS*QVVSVAVAAALAAV Trigger: CACCGCGGCTAATGCCGCCGCCACGGCTACAGAAACGACCTGCCAAGACGTCGCGGCGACCCCCGTCGCGCGGTACCCGCCGATTGTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CCA 90 bp | AGCGCTCGATCCGCCGCAGCCGTGCAGCTTTGCTGTCGGCTGTCATaGAGGCCACAATCGGCGGGTACCGCGCGACGGGGGTCGCCGCGA | + |
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Preference number: 5 (lower is better) Translates to: SARSAAAVQLCCRLS*RPQSAGTARRGSPR Trigger: TCGCGGCGACCCCCGTCGCGCGGTACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | GCACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGCCGTGCAGCTTTaGTGTCGGCTGTCATGGAGGCCACAATCGGCGGGTACCGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: APSPASARSAAAVQL*CRLSWRPQSAGTAR Trigger: TCGCGCGGTACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | CGCAGCGTGCACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGCCGTaGAGCTTTGCTGTCGGCTGTCATGGAGGCCACAATCGGCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: RSVHRRLPALDPPQP*SFAVGCHGGHNRRV Trigger: TACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGCACGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 90 bp | GCTCCGCTGGGGGCGGCGGCAGACCCGACAGGAACACGGTCTTGGTaGAGTACTGGTACCAGCGGTCGGCATTCAGCGCGAAGGTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: APLGAAADPTGTRSW*STGTSGRHSARRSA Trigger: CGCAGACCTTCGCGCTGAATGCCGACCGCTGGTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCCGCCGCCCCCAGCGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | ATTCGCAGCTTCTCGTCTACCGACTCCGCAGCGTGCACCGTCGCCTaGCAGCGCTCGATCCGCCGCAGCCGTGCAGCTTTGCTGTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: IRSFSSTDSAACTVA*QRSIRRSRAALLSA Trigger: AGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGCACGCTGCGGAGTCGGTAGACGAGAAGCTGCGAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | ATCTTGGTGAGGATTCGCAGCTTCTCGTCTACCGACTCCGCAGCGTaGACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGCCGTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ILVRIRSFSSTDSAA*TVACQRSIRRSRAA Trigger: AGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGCACGCTGCGGAGTCGGTAGACGAGAAGCTGCGAATCCTCACCAAGAT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 90 bp | ATCTATAATCGAGGGCGGCAGCGGCCAGGGCCGGGTTGTGTGGGCTaGGGAGGCCCACGAGGGTTGACACCAGCTGATCCAGGAAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: IYNRGRQRPGPGCVG*GGPRGLTPADPGRA Trigger: TGCCCTTCCTGGATCAGCTGGTGTCAACCCTCGTGGGCCTCCTCAGCCCACACAACCCGGCCCTGGCCGCTGCCGCCCTCGATTATAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 90 bp | AGCGGCCAGGGCCGGGTTGTGTGGGCTGAGGAGGCCCACGAGGGTTaGCACCAGCTGATCCAGGAAGGGCAAAGATATGACCTCGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SGQGRVVWAEEAHEG*HQLIQEGQRYDLAL Trigger: GAGAGCGAGGTCATATCTTTGCCCTTCCTGGATCAGCTGGTGTCAACCCTCGTGGGCCTCCTCAGCCCACACAACCCGGCCCTGGCCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | TGGCAGGTCGTTTCTGTAGCCGTGGCGGCGGCATTAGCCGCGGTGTaGAATGAAAGCCTCGGACCGCGTAGCAAAGGCCTCCAACACCTG | + |
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Preference number: 5 (lower is better) Translates to: WQVVSVAVAAALAAV*NESLGPRSKGLQHL Trigger: CAGGTGTTGGAGGCCTTTGCTACGCGGTCCGAGGCTTTCATTGCACACCGCGGCTAATGCCGCCGCCACGGCTACAGAAACGACCTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 90 bp | AACCACCATTTGGGTACCTTCTCTGTTTTAATAAGGCCTCATCCCTaGACCAGCATCCTAACCATTTTTCTCAAATGGAGAGACGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: NHHLGTFSVLIRPHP*TSILTIFLKWRDGC Trigger: GCACCCGTCTCTCCATTTGAGAAAAATGGTTAGGATGCTGGTGCAGGGATGAGGCCTTATTAAAACAGAGAAGGTACCCAAATGGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS GCA 90 bp | GAATCCTTGATACATAGCTTGTGCTCCAGTCCAAGCAAAAAGGCTTaGAATAGCATTAGCTCTAAAAACAACTTCTATCTGATCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: ESLIHSLCSSPSKKA*NSISSKNNFYLIST Trigger: TGTGCTGATCAGATAGAAGTTGTTTTTAGAGCTAATGCTATTGCAAGCCTTTTTGCTTGGACTGGAGCACAAGCTATGTATCAAGGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS GCA 90 bp | TTTACCTTGATACATAGCTTGTGCTCCAGTCCAAGCAAAAAGGCTTaGAATAGCATTAGCTCTAAAAACAACTTCTATCTGATCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: FTLIHSLCSSPSKKA*NSISSKNNFYLIST Trigger: TGTGCTGATCAGATAGAAGTTGTTTTTAGAGCTAATGCTATTGCAAGCCTTTTTGCTTGGACTGGAGCACAAGCTATGTATCAAGGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000508129.1 |
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| CDS GCA 90 bp | GATATAAGCCATAATCACAGATATGCTTATTTGCACAGTAGCTGTTaGCGAATTTCAGTCTACCATGTGCCTATTATTCACCAAAATAGT | + |
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Preference number: 5 (lower is better) Translates to: DISHNHRYAYLHSSC*RISVYHVPIIHQNS Trigger: ACTATTTTGGTGAATAATAGGCACATGGTAGACTGAAATTCGGCAACAGCTACTGTGCAAATAAGCATATCTGTGATTATGGCTTATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 72 bp | CGGCGGGTACCGCGCGACGGGGGTCGCCGCGACGTCTaGGCAGGTCGTTTCTGTAGCCGTGGCGGCGGCATT | + |
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Preference number: 6 (lower is better) Translates to: RRVPRDGGRRDV*AGRFCSRGGGI Trigger: AATGCCGCCGCCACGGCTACAGAAACGACCTGCCAAGACGTCGCGGCGACCCCCGTCGCGCGGTACCCGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CAA 90 bp | GGCCACAATCGGCGGGTACCGCGCGACGGGGGTCGCCGCGACGTCTaGGCAGGTCGTTTCTGTAGCCGTGGCGGCGGCATTAGCCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GHNRRVPRDGGRRDV*AGRFCSRGGGISRG Trigger: ACCGCGGCTAATGCCGCCGCCACGGCTACAGAAACGACCTGCCAAGACGTCGCGGCGACCCCCGTCGCGCGGTACCCGCCGATTGTGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 72 bp | CGAGGGCGGCAGCGGCCAGGGCCGGGTTGTGTGGGCTaGGGAGGCCCACGAGGGTTGACACCAGCTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: RGRQRPGPGCVG*GGPRGLTPADP Trigger: TGGATCAGCTGGTGTCAACCCTCGTGGGCCTCCTCAGCCCACACAACCCGGCCCTGGCCGCTGCCGCCCTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CCA 72 bp | GGCGGGTACCGCGCGACGGGGGTCGCCGCGACGTCTTaGCAGGTCGTTTCTGTAGCCGTGGCGGCGGCATTA | + |
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Preference number: 6 (lower is better) Translates to: GGYRATGVAATS*QVVSVAVAAAL Trigger: TAATGCCGCCGCCACGGCTACAGAAACGACCTGCCAAGACGTCGCGGCGACCCCCGTCGCGCGGTACCCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CCA 72 bp | TCCGCCGCAGCCGTGCAGCTTTGCTGTCGGCTGTCATaGAGGCCACAATCGGCGGGTACCGCGCGACGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SAAAVQLCCRLS*RPQSAGTARRG Trigger: CCCCCGTCGCGCGGTACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CAA 90 bp | TGCACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGCCGTGCAGCTTaGCTGTCGGCTGTCATGGAGGCCACAATCGGCGGGTACCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CTVACQRSIRRSRAA*LSAVMEATIGGYRA Trigger: CGCGCGGTACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 72 bp | CCTGCCAGCGCTCGATCCGCCGCAGCCGTGCAGCTTTaGTGTCGGCTGTCATGGAGGCCACAATCGGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: PASARSAAAVQL*CRLSWRPQSAG Trigger: ACCCGCCGATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 72 bp | AGGATTCGCAGCTTCTCGTCTACCGACTCCGCAGCGTaGACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RIRSFSSTDSAA*TVACQRSIRRS Trigger: GCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTGCACGCTGCGGAGTCGGTAGACGAGAAGCTGCGAATCCT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CAA 90 bp | TCGGGCTCCGCTGGGGGCGGCGGCAGACCCGACAGGAACACGGTCTaGGTGAAGTACTGGTACCAGCGGTCGGCATTCAGCGCGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGSAGGGGRPDRNTV*VKYWYQRSAFSAKV Trigger: GACCTTCGCGCTGAATGCCGACCGCTGGTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCCGCCGCCCCCAGCGGAGCCCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 72 bp | CACCGTCGCCTGCCAGCGCTCGATCCGCCGCAGCCGTaGAGCTTTGCTGTCGGCTGTCATGGAGGCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: HRRLPALDPPQP*SFAVGCHGGHN Trigger: ATTGTGGCCTCCATGACAGCCGACAGCAAAGCTGCACGGCTGCGGCGGATCGAGCGCTGGCAGGCGACGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 72 bp | GGGGCGGCGGCAGACCCGACAGGAACACGGTCTTGGTaGAGTACTGGTACCAGCGGTCGGCATTCAGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: GAAADPTGTRSW*STGTSGRHSAR Trigger: TCGCGCTGAATGCCGACCGCTGGTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCCGCCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CAA 72 bp | GCTGGGGGCGGCGGCAGACCCGACAGGAACACGGTCTaGGTGAAGTACTGGTACCAGCGGTCGGCATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGGGGRPDRNTV*VKYWYQRSAFS Trigger: GCTGAATGCCGACCGCTGGTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCCGCCGCCCCCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS GCA 72 bp | GTTTCTGTAGCCGTGGCGGCGGCATTAGCCGCGGTGTaGAATGAAAGCCTCGGACCGCGTAGCAAAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VSVAVAAALAAV*NESLGPRSKGL Trigger: GAGGCCTTTGCTACGCGGTCCGAGGCTTTCATTGCACACCGCGGCTAATGCCGCCGCCACGGCTACAGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 72 bp | GGCCGGGTTGTGTGGGCTGAGGAGGCCCACGAGGGTTaGCACCAGCTGATCCAGGAAGGGCAAAGATATGAC | + |
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Preference number: 6 (lower is better) Translates to: GRVVWAEEAHEG*HQLIQEGQRYD Trigger: GTCATATCTTTGCCCTTCCTGGATCAGCTGGTGTCAACCCTCGTGGGCCTCCTCAGCCCACACAACCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CCA 72 bp | GGCAGACCCGACAGGAACACGGTCTTGGTGAAGTACTaGTACCAGCGGTCGGCATTCAGCGCGAAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GRPDRNTVLVKY*YQRSAFSAKVC Trigger: GCAGACCTTCGCGCTGAATGCCGACCGCTGGTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 72 bp | TGTGGGCTGAGGAGGCCCACGAGGGTTGACACCAGCTaGTCCAGGAAGGGCAAAGATATGACCTCGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CGLRRPTRVDTS*SRKGKDMTSLS Trigger: GGAGAGCGAGGTCATATCTTTGCCCTTCCTGGATCAGCTGGTGTCAACCCTCGTGGGCCTCCTCAGCCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS CCA 72 bp | CTCAGCCATGTGACACATGGTCACACAGCTTTGTGGTaGAACAGCCAACAGGAAACCTGGCCCGCCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LSHVTHGHTALW*NSQQETWPAPL Trigger: GAGTGGGGCGGGCCAGGTTTCCTGTTGGCTGTTCCACCACAAAGCTGTGTGACCATGTGTCACATGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515647.1 |
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| CDS GCA 72 bp | AGGCAGGAGAACTGCTTGAATCCAAGAGGTGGAGGCTaGAGTGAGCCAAGATCCACAGTACTTGAGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: RQENCLNPRGGG*SEPRSTVLEPR Trigger: CCTAGGCTCAAGTACTGTGGATCTTGGCTCACTGCAGCCTCCACCTCTTGGATTCAAGCAGTTCTCCTGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CCA 72 bp | GCCAACAGGAAACCTGGCCCGCCCCACTCTCTTAAGTaGCGTTTCTCTTCATCACCACTGCTCTTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: ANRKPGPPHSLK*RFSSSPLLFHL Trigger: CAAATGGAAGAGCAGTGGTGATGAAGAGAAACGCCACTTAAGAGAGTGGGGCGGGCCAGGTTTCCTGTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515647.1 |
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| CDS CAA 90 bp | AAAAAGAAGTTACTACTCAGCCATGTGACACATGGTCACACAGCTTaGTGGTGGAACAGCCAACAGGAAACCTGGCCCGCCCCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KKKLLLSHVTHGHTA*WWNSQQETWPAPLS Trigger: AGAGAGTGGGGCGGGCCAGGTTTCCTGTTGGCTGTTCCACCACAAAGCTGTGTGACCATGTGTCACATGGCTGAGTAGTAACTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515647.1 |
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| CDS CCA 72 bp | AATAATTTCTTCACCACGCACCCAGTAAAAATGAACTaGGCATCTATAATCGAGGGCGGCAGCGGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: NNFFTTHPVKMN*ASIIEGGSGQG Trigger: GCCCTGGCCGCTGCCGCCCTCGATTATAGATGCCCAGTTCATTTTTACTGGGTGCGTGGTGAAGAAATTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507110.6 |
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| CDS TCA 72 bp | GTCCAAGATCAAGGCACCAGCAGATTCAGTGTGTGGTaGGGATCTATTCTCTGGCTCATACATGGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VQDQGTSRFSVW*GSILWLIHGAF Trigger: GAAGGCACCATGTATGAGCCAGAGAATAGATCCTCACCACACACTGAATCTGCTGGTGCCTTGATCTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 90 bp | AAGTCACCTCACAGCTTATTAGCCAGCCTGTGTTTGAACCACCATTaGGGTACCTTCTCTGTTTTAATAAGGCCTCATCCCTGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSPHSLLASLCLNHH*GTFSVLIRPHPCTS Trigger: GCTGGTGCAGGGATGAGGCCTTATTAAAACAGAGAAGGTACCCAAATGGTGGTTCAAACACAGGCTGGCTAATAAGCTGTGAGGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS TCA 72 bp | ATCTGGTATCGCAAGTCATCAATTCGACCTCTTCGATaGCCACGAGGAATAATTTCTTCACCACGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: IWYRKSSIRPLR*PRGIISSPRTQ Trigger: CTGGGTGCGTGGTGAAGAAATTATTCCTCGTGGTCATCGAAGAGGTCGAATTGATGACTTGCGATACCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS GCA 72 bp | GATCACAGCCTGGGAGACAAAAGGTCGAGTAACATCTaGTTCACTCCAGAATCCTTGATACATAGCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: DHSLGDKRSSNI*FTPESLIHSLC Trigger: GCACAAGCTATGTATCAAGGATTCTGGAGTGAAGCAGATGTTACTCGACCTTTTGTCTCCCAGGCTGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS CAA 90 bp | AGGGGTCCCCAACCAGATATAAGCCATAATCACAGATATGCTTATTaGCACAGTAGCTGTTGCCGAATTTCAGTCTACCATGTGCCTATT | + |
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Preference number: 6 (lower is better) Translates to: RGPQPDISHNHRYAY*HSSCCRISVYHVPI Trigger: AATAGGCACATGGTAGACTGAAATTCGGCAACAGCTACTGTGCAAATAAGCATATCTGTGATTATGGCTTATATCTGGTTGGGGACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS GCA 72 bp | ATCTGCTTCACTCCAGAATCCTTGATACATAGCTTGTaGTCCAGTCCAAGCAAAAAGGCTTGCAATAGCATT | + |
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Preference number: 6 (lower is better) Translates to: ICFTPESLIHSL*SSPSKKACNSI Trigger: AATGCTATTGCAAGCCTTTTTGCTTGGACTGGAGCACAAGCTATGTATCAAGGATTCTGGAGTGAAGCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS CCA 72 bp | GGCACAAACTCTGCGAGTTGCTTGGATATTCGAATCTaGTTGTTTGGTTTATCATCTATCTGGTATCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GTNSASCLDIRI*LFGLSSIWYRK Trigger: CTTGCGATACCAGATAGATGATAAACCAAACAACCAGATTCGAATATCCAAGCAACTCGCAGAGTTTGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS CAA 72 bp | GGTAAGTCACCTCACAGCTTATTAGCCAGCCTGTGTTaGAACCACCATTTGGGTACCTTCTCTGTTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: GKSPHSLLASLC*NHHLGTFSVLI Trigger: TATTAAAACAGAGAAGGTACCCAAATGGTGGTTCAAACACAGGCTGGCTAATAAGCTGTGAGGTGACTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 90 bp | CTTCTCATCATGTTCTCACAGGGTGTAAGGGATGAAAAAGTTCCCTaGGGTCTATTTTATAAGGGCACTAATTCTATTCCTGAAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLIMFSQGVRDEKVP*GLFYKGTNSIPEGA Trigger: AGCACCTTCAGGAATAGAATTAGTGCCCTTATAAAATAGACCCAAGGGAACTTTTTCATCCCTTACACCCTGTGAGAACATGATGAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 72 bp | ACAAACTCTGCGAGTTGCTTGGATATTCGAATCTGGTaGTTTGGTTTATCATCTATCTGGTATCGCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TNSASCLDIRIW*FGLSSIWYRKS Trigger: TGACTTGCGATACCAGATAGATGATAAACCAAACAACCAGATTCGAATATCCAAGCAACTCGCAGAGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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| CDS GCA 72 bp | CATAATCACAGATATGCTTATTTGCACAGTAGCTGTTaGCGAATTTCAGTCTACCATGTGCCTATTATTCAC | + |
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Preference number: 6 (lower is better) Translates to: HNHRYAYLHSSC*RISVYHVPIIH Trigger: GTGAATAATAGGCACATGGTAGACTGAAATTCGGCAACAGCTACTGTGCAAATAAGCATATCTGTGATTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 72 bp | ATGTTCTCACAGGGTGTAAGGGATGAAAAAGTTCCCTaGGGTCTATTTTATAAGGGCACTAATTCTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: MFSQGVRDEKVP*GLFYKGTNSIP Trigger: AGGAATAGAATTAGTGCCCTTATAAAATAGACCCAAGGGAACTTTTTCATCCCTTACACCCTGTGAGAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS CAA 72 bp | CAACCAGATATAAGCCATAATCACAGATATGCTTATTaGCACAGTAGCTGTTGCCGAATTTCAGTCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: QPDISHNHRYAY*HSSCCRISVYH Trigger: ATGGTAGACTGAAATTCGGCAACAGCTACTGTGCAAATAAGCATATCTGTGATTATGGCTTATATCTGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS TCA 72 bp | AGAAGAACGCAAATCAGATTGGTTATATACACCTCATaGGAATCAGCTGACAAATTATTGGCTCTAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: RRTQIRLVIYTS*ESADKLLALMN Trigger: GTTCATTAGAGCCAATAATTTGTCAGCTGATTCTCATGAGGTGTATATAACCAATCTGATTTGCGTTCTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000230914.4 |
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| CDS GCA 72 bp | GCAGTTTTTGAGCCAACAAATATGTGGTTTTCATACTaGCGTTTGAATAATGGAAGTTTGTCTGGTTTACAT | + |
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Preference number: 6 (lower is better) Translates to: AVFEPTNMWFSY*RLNNGSLSGLH Trigger: ATGTAAACCAGACAAACTTCCATTATTCAAACGGCAGTATGAAAACCACATATTTGTTGGCTCAAAAACTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000507110.6 ENST00000515647.1 |
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