Pregenerated sensors for MRPS28 (Homo sapiens)
Ensembl gene IDs: ENSG00000147586Ensembl transcript IDs: ENST00000276585.9, ENST00000518271.1, ENST00000518371.2, ENST00000519120.1, ENST00000519386.5, ENST00000520946.1, ENST00000521434.5, ENST00000521605.1, ENST00000522987.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGAACTGCAAGTTGTATCTGTTGTTaGTCCCAGGAACCTAGACGT | + |
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Preference number: 2 (lower is better) Translates to: CSSFDLESLLSWIPKRTASCICC*SQEPRR Trigger: ACGTCTAGGTTCCTGGGAGCAACAACAGATACAACT...TGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| 3UTR-3UTR CAA 90 bp | ACAAGTGCATTTTTAACTCTGCTGATCATGTGGTTGAAGAAGACACAAATGTCTTCTGTCTCTGTGGATTaGTCTATTCTGAACATTTCA | + |
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Preference number: 3 (lower is better) Translates to: TSAFLTLLIMWLKKTQMSSVSVD*SILNIS Trigger: TGAAATGTTCAGAATAGACAAATCCACAGAGACAGA...AGACATTTGTGTCTTCTTCAACCACATGATCAGCAGAGTTAAAAATGCACTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| 3UTR TCA 72 bp | TTCACAATTAGTCTAATTGCATTCTTGATGAATAACTaGCTTCAGCAAAGGAGTCAATCCACTAAGCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: FTISLIAFLMNN*LQQRSQSTKQS Trigger: ACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGTTATTCATCAAGAATGCAATTAGACTAATTGTGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276585.9 ENST00000519386.5 |
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| CDS-3UTR GCA 90 bp | TTAGCCTCTAGTACAGTTGTATCTGTTGTTGCTCCCAGGAACCTAGACGTAAGTGCTCGCGAAACCGCCTaGGCGCGTCTTAGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LASSTVVSVVAPRNLDVSARETA*ARLRLL Trigger: AAGGAGCCTAAGACGCGCGCAGGCGGTTTCGCGAGC...ACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR GCA 90 bp | TCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGAACTGCATTAGCCCGGATCCACTCTCAGTaGCTACACCCCGAAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFDLESLLSWIPKRTALARIHSQ*LHPERA Trigger: GGCCCTTTCGGGGTGTAGGCACTGAGAGTGGATCCG...GGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR GCA 90 bp | TTTCATGATGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGATGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FHDVLLSILSLYSPGFPRCRSSE*RSNALA Trigger: CGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACA...TCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR CCA 90 bp | GCATTAGCCTCTAGTACAGTTGTATCTGTTGTTGCTCCCAGGAACCTAGACGTAAACACTCGCAGAAAATaGCTCTCGGCAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: ALASSTVVSVVAPRNLDVNTRRK*LSAATA Trigger: TGCTGTGGCTGCCGAGAGCCATTTTCTGCGAGTGTT...TACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR CCA 90 bp | TTTCATGATGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGCCGCAACCGGACCCTaGTTCCTTTCTGGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHDVLLSILSLYSPGFPRAATGP*FLSGIS Trigger: GGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGC...TCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR TCA 90 bp | GCATTAGCCTCTAGTACAGTTGTATCTGTTGTTGCTCCCAGGAACCTAGACGTATTCTTCTTTCGATCTTaGGTCTTTACTCTCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALASSTVVSVVAPRNLDVFFFRS*VFTLLD Trigger: ATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAA...TACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR CCA 90 bp | GTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGAACTGCATGAGTCTTTACTCTCCTaGATTCCCAAGAGAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLLSILSLYSPGFPRELHESLLS*IPKRTA Trigger: TGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTC...ATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR GCA 90 bp | TTTCATGATGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAAGTTGTATCTGTTGTTaGTCCCAGGAACCTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: FHDVLLSILSLYSPGFPRSCICC*SQEPRR Trigger: ACGTCTAGGTTCCTGGGAGCAACAACAGATACAACT...TCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR TCA 90 bp | GCTGATCATGTGGTTGAAGAAGACACAAATGTCTTAAACAGTCATCTTTTAGAGGAAAGATCCGTCCAATaGCCAGTTTATCCTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADHVVEEDTNVLNSHLLEERSVQ*PVYPLQ Trigger: CTGCAAAGGATAAACTGGTCATTGGACGGATCTTTC...CTCTAAAAGATGACTGTTTAAGACATTTGTGTCTTCTTCAACCACATGATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR GCA 90 bp | GCTGATCATGTGGTTGAAGAAGACACAAATGTCTTAAACAGTCATCTTTTAGAGGACCAGTTTATCCTTTaGAGGTCCCATCTGTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: ADHVVEEDTNVLNSHLLEDQFIL*RSHLCK Trigger: CTTACACAGATGGGACCTGCAAAGGATAAACTGGTC...CTCTAAAAGATGACTGTTTAAGACATTTGTGTCTTCTTCAACCACATGATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR CCA 90 bp | CCCAAAGTGTATAATTCAGTGACTTTGAATATATTCTCAGAGCTGTACAGCTTTCAGCATACCACGAAATaGGACTCTCTCCATCCACTT | + |
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Preference number: 4 (lower is better) Translates to: PKVYNSVTLNIFSELYSFQHTTK*DSLHPL Trigger: AAGTGGATGGAGAGAGTCCCATTTCGTGGTATGCTG...AAAGCTGTACAGCTCTGAGAATATATTCAAAGTCACTGAATTATACACTTTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR TCA 90 bp | AACAAGTGCATTTTTAACTCTGCTGATCATGTGGTTGAAGAAGACACAAATGTCTCATTCTCCACAATATaGAAGATCCGTCCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: NKCIFNSADHVVEEDTNVSFSTI*KIRPMT Trigger: GGTCATTGGACGGATCTTTCATATTGTGGAGAATGA...GACATTTGTGTCTTCTTCAACCACATGATCAGCAGAGTTAAAAATGCACTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR CCA 90 bp | CCCAAAGTGTATAATTCAGTGACTTTGAATATATTCTCAGAGCTGTACAGCTTTCTCTCCATCCACTTCTaGTCTTCTACATACACAATG | + |
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Preference number: 4 (lower is better) Translates to: PKVYNSVTLNIFSELYSFLSIHF*SSTYTM Trigger: CATTGTGTATGTAGAAGACCAGAAGTGGATGGAGAG...AAAGCTGTACAGCTCTGAGAATATATTCAAAGTCACTGAATTATACACTTTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR CCA 90 bp | ACAAGTGCATTTTTAACTCTGCTGATCATGTGGTTGAAGAAGACACAAATGTCTACTCTGCTGATCATGTaGTTGAAGAAGACACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSAFLTLLIMWLKKTQMSTLLIM*LKKTQM Trigger: CATTTGTGTCTTCTTCAACCACATGATCAGCAGAGT...AGACATTTGTGTCTTCTTCAACCACATGATCAGCAGAGTTAAAAATGCACTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR CCA 90 bp | GCTGATCATGTGGTTGAAGAAGACACAAATGTCTTAAACAGTCATCTTTTAGAGTTCCAAAGTCAGAGTTaGAAGAAAAACAGGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: ADHVVEEDTNVLNSHLLEFQSQS*KKNRLS Trigger: TGATAACCTGTTTTTCTTCCAACTCTGACTTTGGAA...CTCTAAAAGATGACTGTTTAAGACATTTGTGTCTTCTTCAACCACATGATCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS GCA 90 bp | GGAGAACCCTTCTGTAGGGGCTCCACCTTCTGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCGAAACCGCCTGCGCGCGTCTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: GEPFCRGSTFCRSSE*RSNALAKPPARVLG Trigger: GCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAGAAGGGTTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276585.9 |
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| CDS GCA 90 bp | GGTATTTCCTTCTGTAGGGGCTCCACCTTCTGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCGAAACCGCCTGCGCGCGTCTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: GISFCRGSTFCRSSE*RSNALAKPPARVLG Trigger: GCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAGAAGGAAATACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS CCA 90 bp | CCTACACCCCGAAAGGGCCTGAAGAAGAGAAACACTCGCAGAAAATaGCTCTCGGCAGCCACAGCACGGGTCCGACACAGCGCCGCCATG | + |
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Preference number: 5 (lower is better) Translates to: PTPRKGLKKRNTRRK*LSAATARVRHSAAM Trigger: CATGGCGGCGCTGTGTCGGACCCGTGCTGTGGCTGCCGAGAGCCATTTTCTGCGAGTGTTTCTCTTCTTCAGGCCCTTTCGGGGTGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000276585.9 ENST00000521605.1 ENST00000522987.1 |
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| CDS TCA 90 bp | TACCACTTTCGGATCCACTCTCAGTGCCTACACCCCGAAAGGGCCTaGAGAAGAGAAACACTCGCAGAAAATGGCTCTCGGCAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: YHFRIHSQCLHPERA*RRETLAENGSRQPQ Trigger: CTGTGGCTGCCGAGAGCCATTTTCTGCGAGTGTTTCTCTTCTTCAGGCCCTTTCGGGGTGTAGGCACTGAGAGTGGATCCGAAAGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000521605.1 ENST00000522987.1 |
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| CDS CCA 90 bp | CATCTCTTCCCACCAGCATTCAATCCCAGGAAAACAAGCGCAGTGTaGACAGACCCGGCCCAGTACGCAAATGCCACACAAAAGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: HLFPPAFNPRKTSAV*TDPAQYANATQKDN Trigger: GTTGTCCTTTTGTGTGGCATTTGCGTACTGGGCCGGGTCTGTCCACACTGCGCTTGTTTTCCTGGGATTGAATGCTGGTGGGAAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521434.5 |
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| CDS-3UTR CAA 90 bp | GCATTAGCCTCTAGTACAGTTGTATCTGTTGTTGCTCCCAGGAACCTAGACGTACGCGTCTTAGGCTCCTaGGCATTGGAACTACCACTT | + |
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Preference number: 5 (lower is better) Translates to: ALASSTVVSVVAPRNLDVRVLGS*ALELPL Trigger: AAGTGGTAGTTCCAATGCCAAGGAGCCTAAGACGCG...TACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS GCA 90 bp | ATTCTCCACAATATGAAAGATCCGTCCAATGACCAGTTTATCCTTTaGAGGTCCCATCTGTGTAAGAGGAGAATGTCTCAGCATAGATGC | + |
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Preference number: 5 (lower is better) Translates to: ILHNMKDPSNDQFIL*RSHLCKRRMSQHRC Trigger: GCATCTATGCTGAGACATTCTCCTCTTACACAGATGGGACCTGCAAAGGATAAACTGGTCATTGGACGGATCTTTCATATTGTGGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000519120.1 ENST00000519386.5 |
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| CDS-3UTR CAA 90 bp | CATGATGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGAATTAGGCTCCTTGGCATaGGAACTACCACTTTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: HDVLLSILSLYSPGFPRELGSLA*ELPLSD Trigger: ATCCGAAAGTGGTAGTTCCAATGCCAAGGAGCCTAA...TTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS TCA 90 bp | AATCTATGTACAGATCATTCTCCACAATATGAAAGATCCGTCCAATaGCCAGTTTATCCTTTGCAGGTCCCATCTTCTGTAGAAGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: NLCTDHSPQYERSVQ*PVYPLQVPSSVEAP Trigger: CGGAGCTTCTACAGAAGATGGGACCTGCAAAGGATAAACTGGTCATTGGACGGATCTTTCATATTGTGGAGAATGATCTGTACATAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522987.1 |
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| CDS TCA 90 bp | TTTTCCAAAGTCAGAGTTGGAAGAAAAACAGGTTATCATCACTTGTaGAAATCTCCTCCAAACAGCATACCACGAAATGGGACTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FSKVRVGRKTGYHHL*KSPPNSIPRNGTLS Trigger: GGAGAGAGTCCCATTTCGTGGTATGCTGTTTGGAGGAGATTTTCACAAGTGATGATAACCTGTTTTTCTTCCAACTCTGACTTTGGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000518371.2 ENST00000522987.1 |
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| CDS-3UTR CAA 90 bp | CATGATGTTCTTCTTTCGATCTTGAGTCTTTACTCTCCTGGATTCCCAAGAGAAGTTCTTCTTTCGATCTaGAGTCTTTACTCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: HDVLLSILSLYSPGFPREVLLSI*SLYSPG Trigger: TCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAAC...TTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521605.1 |
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| CDS-3UTR CAA 90 bp | AACAAGTGCATTTTTAACTCTGCTGATCATGTGGTTGAAGAAGACACAAATGTCCTGCTGATCATGTGGTaGAAGAAGACACAAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: NKCIFNSADHVVEEDTNVLLIMW*KKTQMS Trigger: AGACATTTGTGTCTTCTTCAACCACATGATCAGCAG...GACATTTGTGTCTTCTTCAACCACATGATCAGCAGAGTTAAAAATGCACTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS TCA 90 bp | TTCTGGTATTTCTCTCCATCCACTTCTGGTCTTCTACATACACAATaGAACTTTCCACCAAAATCTATGTACAGATCATTCTCCACAATA | + |
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Preference number: 5 (lower is better) Translates to: FWYFSPSTSGLLHTQ*NFPPKSMYRSFSTI Trigger: TATTGTGGAGAATGATCTGTACATAGATTTTGGTGGAAAGTTTCATTGTGTATGTAGAAGACCAGAAGTGGATGGAGAGAAATACCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000519120.1 ENST00000519386.5 ENST00000520946.1 ENST00000521434.5 |
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| CDS-3UTR CAA 90 bp | AACAAGTGCATTTTTAACTCTGCTGATCATGTGGTTGAAGAAGACACAAATGTCCAGGGTTCATCCATGTaGTATTACAACTTCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: NKCIFNSADHVVEEDTNVQGSSM*YYNFFI Trigger: GATAAAGAAGTTGTAATACAACATGGATGAACCCTG...GACATTTGTGTCTTCTTCAACCACATGATCAGCAGAGTTAAAAATGCACTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS-3UTR CAA 90 bp | CCCAAAGTGTATAATTCAGTGACTTTGAATATATTCTCAGAGCTGTACAGCTTTTCTGTCTCTGTGGATTaGTCTATTCTGAACATTTCA | + |
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Preference number: 5 (lower is better) Translates to: PKVYNSVTLNIFSELYSFSVSVD*SILNIS Trigger: TGAAATGTTCAGAATAGACAAATCCACAGAGACAGA...AAAGCTGTACAGCTCTGAGAATATATTCAAAGTCACTGAATTATACACTTTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518371.2 |
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| CDS GCA 72 bp | CTCCGAGTGCCGCTCCAACGCGCTCGCGAAACCGCCTaGGCGCGTCTTAGGCTCCTTGGCATTGGAACTACC | + |
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Preference number: 6 (lower is better) Translates to: LRVPLQRARETA*ARLRLLGIGTT Trigger: GGTAGTTCCAATGCCAAGGAGCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000521605.1 ENST00000522987.1 |
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| CDS GCA 72 bp | TTCTGTAGGGGCTCCACCTTCTGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCGAAACCGCCTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: FCRGSTFCRSSE*RSNALAKPPAR Trigger: GCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGGTGGAGCCCCTACAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276585.9 ENST00000521605.1 |
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| CDS GCA 72 bp | TCCTTTGCAGGTCCCATCTTCTGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCGAAACCGCCTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SFAGPIFCRSSE*RSNALAKPPAR Trigger: GCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGATGGGACCTGCAAAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522987.1 |
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| CDS GCA 72 bp | ATGGCAAAACCCCATCTCTTCTGTAGAAGCTCCGAGTaGCGCTCCAACGCGCTCGCGAAACCGCCTGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: MAKPHLFCRSSE*RSNALAKPPAR Trigger: GCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCGGCACTCGGAGCTTCTACAGAAGAGATGGGGTTTTGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518271.1 |
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| CDS CAA 90 bp | AACGCGCTCGCGAAACCGCCTGCGCGCGTCTTAGGCTCCTTGGCATaGGAACTACCACTTTCGGATCCACTCTCAGTGCCTACACCCCGA | + |
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Preference number: 6 (lower is better) Translates to: NALAKPPARVLGSLA*ELPLSDPLSVPTPR Trigger: TCGGGGTGTAGGCACTGAGAGTGGATCCGAAAGTGGTAGTTCCAATGCCAAGGAGCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000521605.1 ENST00000522987.1 |
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| CDS CAA 90 bp | CGCTCCAACGCGCTCGCGAAACCGCCTGCGCGCGTCTTAGGCTCCTaGGCATTGGAACTACCACTTTCGGATCCACTCTCAGTGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: RSNALAKPPARVLGS*ALELPLSDPLSVPT Trigger: TGTAGGCACTGAGAGTGGATCCGAAAGTGGTAGTTCCAATGCCAAGGAGCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGCGTTGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000521605.1 ENST00000522987.1 |
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| CDS CAA 72 bp | GCGCTCGCGAAACCGCCTGCGCGCGTCTTAGGCTCCTaGGCATTGGAACTACCACTTTCGGATCCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ALAKPPARVLGS*ALELPLSDPLS Trigger: TGAGAGTGGATCCGAAAGTGGTAGTTCCAATGCCAAGGAGCCTAAGACGCGCGCAGGCGGTTTCGCGAGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000521605.1 ENST00000522987.1 |
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| CDS CCA 72 bp | CGAAAGGGCCTGAAGAAGAGAAACACTCGCAGAAAATaGCTCTCGGCAGCCACAGCACGGGTCCGACACAGC | + |
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Preference number: 6 (lower is better) Translates to: RKGLKKRNTRRK*LSAATARVRHS Trigger: GCTGTGTCGGACCCGTGCTGTGGCTGCCGAGAGCCATTTTCTGCGAGTGTTTCTCTTCTTCAGGCCCTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000276585.9 ENST00000521605.1 ENST00000522987.1 |
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| CDS CCA 72 bp | CCACCAGCATTCAATCCCAGGAAAACAAGCGCAGTGTaGACAGACCCGGCCCAGTACGCAAATGCCACACAA | + |
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Preference number: 6 (lower is better) Translates to: PPAFNPRKTSAV*TDPAQYANATQ Trigger: TTGTGTGGCATTTGCGTACTGGGCCGGGTCTGTCCACACTGCGCTTGTTTTCCTGGGATTGAATGCTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519386.5 ENST00000521434.5 |
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| CDS GCA 72 bp | AAGCGCAGTGTGGACAGACCCGGCCCAGTACGCAAATaGCACACAAAAGGACAACGAAAGGAAGAAAAACAC | + |
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Preference number: 6 (lower is better) Translates to: KRSVDRPGPVRK*HTKGQRKEEKH Trigger: GTGTTTTTCTTCCTTTCGTTGTCCTTTTGTGTGGCATTTGCGTACTGGGCCGGGTCTGTCCACACTGCGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521434.5 |
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| CDS GCA 72 bp | AATATGAAAGATCCGTCCAATGACCAGTTTATCCTTTaGAGGTCCCATCTGTGTAAGAGGAGAATGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: NMKDPSNDQFIL*RSHLCKRRMSQ Trigger: CTGAGACATTCTCCTCTTACACAGATGGGACCTGCAAAGGATAAACTGGTCATTGGACGGATCTTTCATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000518371.2 ENST00000519120.1 ENST00000519386.5 |
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| CDS TCA 72 bp | ACAGATCATTCTCCACAATATGAAAGATCCGTCCAATaGCCAGTTTATCCTTTGCAGGTCCCATATCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: TDHSPQYERSVQ*PVYPLQVPYLS Trigger: TGACAGATATGGGACCTGCAAAGGATAAACTGGTCATTGGACGGATCTTTCATATTGTGGAGAATGATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520946.1 ENST00000521434.5 |
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| CDS TCA 72 bp | CTCTCTCCATCCACTTCTGGTCTTCTACATACACAATaGAACTTTCCACCAAAATCTATGTACAGATCATTC | + |
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Preference number: 6 (lower is better) Translates to: LSPSTSGLLHTQ*NFPPKSMYRSF Trigger: GAATGATCTGTACATAGATTTTGGTGGAAAGTTTCATTGTGTATGTAGAAGACCAGAAGTGGATGGAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518371.2 ENST00000522987.1 |
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| CDS TCA 72 bp | TTCTCTCCATCCACTTCTGGTCTTCTACATACACAATaGAACTTTCCACCAAAATCTATGTACAGATCATTC | + |
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Preference number: 6 (lower is better) Translates to: FSPSTSGLLHTQ*NFPPKSMYRSF Trigger: GAATGATCTGTACATAGATTTTGGTGGAAAGTTTCATTGTGTATGTAGAAGACCAGAAGTGGATGGAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000276585.9 ENST00000518271.1 ENST00000519120.1 ENST00000519386.5 ENST00000520946.1 ENST00000521434.5 |
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