RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPS27 (Homo sapiens)

Ensembl gene IDs: ENSG00000113048

Ensembl transcript IDs: ENST00000261413.10, ENST00000457646.8, ENST00000506957.1, ENST00000508863.6, ENST00000513900.5, ENST00000515226.5, ENST00000515404.5, ENST00000519143.5, ENST00000519874.2, ENST00000522042.1, ENST00000522095.1, ENST00000522404.5, ENST00000522562.5, ENST00000523654.5

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTaGGGAGAGGGAGACCATTCAAAAGCCTGTGCTTGGCCGGGTGTG +
Preference number: 1 (lower is better)
Translates to: KVSGCTVHLGLMYLG*GEGDHSKACAWPGV
Trigger: CACACCCGGCCAAGCACAGGCTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 90 bp GACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTaGGCTGGGGAGAGGGAGACCATTCAAAAGCCTGTGCTTGGCCGG +
Preference number: 1 (lower is better)
Translates to: DTRSQDAQFTLASCT*AGERETIQKPVLGR
Trigger: CCGGCCAAGCACAGGCTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR GCA 90 bp CAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATaGACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGA +
Preference number: 1 (lower is better)
Translates to: QLALRKETQGHKVSG*TVHLGLMYLGWGEG
Trigger: TCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 90 bp CCCAGTGCAGGTCCAGAAGGGCGAGATGTGGCAGAAAGGAGAATGTaGGAATGTGTGAGTATCCCACAGCCAGCTCACAGTGCAGCTTGC +
Preference number: 1 (lower is better)
Translates to: PSAGPEGRDVAERRM*ECVSIPQPAHSAAC
Trigger: GCAAGCTGCACTGTGAGCTGGCTGTGGGATACTCACACATTCCCACATTCTCCTTTCTGCCACATCTCGCCCTTCTGGACCTGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 90 bp AAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTaGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATTCAAAAGC +
Preference number: 1 (lower is better)
Translates to: KGDSGTQGLRMHSSP*PHVPGLGRGRPFKS
Trigger: GCTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATaGGTAGAGGAAGCTGAGGCTGTTGTCCAGGCCACTGCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: VPCHVGHIACFKKRR*VEEAEAVVQATAES
Trigger: GGACTCAGCAGTGGCCTGGACAACAGCCTCAGCTTCCTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR GCA 90 bp AAGGAGAATGTGGGAATGTGTGAGTATCCCACAGCCAGCTCACAGTaGAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAG +
Preference number: 1 (lower is better)
Translates to: KENVGMCEYPTASSQ*SLHSERRLRDTRSQ
Trigger: CTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGGGATACTCACACATTCCCACATTCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 90 bp AAATGGAAATCCAGTGAGTTCATGGCCTTGAGTTCACTCCTGTCCTaGATTTCTCCCAGTGCAGGTCCAGAAGGGCGAGATGTGGCAGAA +
Preference number: 1 (lower is better)
Translates to: KWKSSEFMALSSLLS*ISPSAGPEGRDVAE
Trigger: TTCTGCCACATCTCGCCCTTCTGGACCTGCACTGGGAGAAATTCAGGACAGGAGTGAACTCAAGGCCATGAACTCACTGGATTTCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 90 bp TCCCTATGGGTGCCTAAAAATGGAAATCCAGTGAGTTCATGGCCTTaGGTTCACTCCTGTCCTGAATTTCTCCCAGTGCAGGTCCAGAAG +
Preference number: 1 (lower is better)
Translates to: SLWVPKNGNPVSSWP*VHSCPEFLPVQVQK
Trigger: CTTCTGGACCTGCACTGGGAGAAATTCAGGACAGGAGTGAACTCAAGGCCATGAACTCACTGGATTTCCATTTTTAGGCACCCATAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGGGCGGGCAGATCACTTaGGGTCAGGAGGTTGAGACC +
Preference number: 2 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGGGQIT*GQEVET
Trigger: GGTCTCAACCTCCTGACCTCAAGTGATCTGCCCGCC...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR TCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAATGGGTAGAGGAAGCTaGGGCTGTTGTCCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQMGRGS*GCCPGH
Trigger: GTGGCCTGGACAACAGCCTCAGCTTCCTCTACCCAT...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATTTCTTGGCATCTCGATaGGCAGTCATGGTGCCTTGC +
Preference number: 2 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHFLASR*AVMVPC
Trigger: GCAAGGCACCATGACTGCCCATCGAGATGCCAAGAA...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR GCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGCAGTCATGGTGCCTTaGCATGTAGGGCACATAGCC +
Preference number: 2 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQAVMVP*HVGHIA
Trigger: GGCTATGTGCCCTACATGGCAAGGCACCATGACTGC...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CAA 90 bp GAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTaGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATTCAAAAG +
Preference number: 2 (lower is better)
Translates to: ERRLRDTRSQDAQFT*ASCTWAGERETIQK
Trigger: CTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGTTCCATAGCCCTTCTTaGCATCTCGATGGGCAGTCA +
Preference number: 2 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLFHSPS*HLDGQS
Trigger: TGACTGCCCATCGAGATGCCAAGAAGGGCTATGGAA...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTCTCATGTACCTGGGCTaGGGAGAGGGAGACCATTCA +
Preference number: 2 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSLMYLG*GEGDHS
Trigger: TGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAG...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR TCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTGCCTGTGCTTCAACCTaGCTCTTCAGCCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSACAST*LFSLGF
Trigger: GAAACCAAGGCTGAAGAGTCAGGTTGAAGCACAGGC...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CAA 90 bp AATGTGGGAATGTGTGAGTATCCCACAGCCAGCTCACAGTGCAGCTaGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCA +
Preference number: 2 (lower is better)
Translates to: NVGMCEYPTASSQCS*HSERRLRDTRSQDA
Trigger: TGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGGGATACTCACACATTCCCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAACTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCA +
Preference number: 2 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQLTLQP*FLPVLS
Trigger: TGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAG...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACCTGGTGACTTCAGTCTaGCCACTAGCCACCTGCATA +
Preference number: 2 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNLVTSV*PLATCI
Trigger: TATGCAGGTGGCTAGTGGTCAGACTGAAGTCACCAG...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGATTAGAAAGGTGTGGTaGTATGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLIRKVW*YAPVIP
Trigger: TGGGATTACAGGTGCATACCACCACACCTTTCTAAT...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACCCAGGAACTCCATTATaGGCCTCAAGAGTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNPGTPL*ASRVLL
Trigger: AAGGAGGACTCTTGAGGCTCATAATGGAGTTCCTGG...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCCCAGTACTGTCACTaGGTCTTAGGAACTTTAATG +
Preference number: 2 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSSQYCH*VLGTLM
Trigger: CATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGA...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTAAAAACAAAAGCCTGTaGTTCAACCTGACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSKNKSL*FNLTLQ
Trigger: CTGAAGAGTCAGGTTGAAGCACAGGCTTTTGTTTTT...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR GCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTGCAGTCATGGTGCCTTaGCATGTAGGGCACATAGCC +
Preference number: 2 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPAVMVP*HVGHIA
Trigger: GGCTATGTGCCCTACATGGCAAGGCACCATGACTGC...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
3UTR-3UTR CCA 90 bp CTAGCTAGTCTCCCTAAACAGGGCCAGAACATCCCTTTCTTTATCCCTTCTTCACTCTTTACTCTCTTATaGAGTAACTGTAAGGCCATC +
Preference number: 2 (lower is better)
Translates to: LASLPKQGQNIPFFIPSSLFTLL*SNCKAI
Trigger: GATGGCCTTACAGTTACTCCATAAGAGAGTAAAGAG...TGAAGAAGGGATAAAGAAAGGGATGTTCTGGCCCTGTTTAGGGAGACTAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515404.5
3UTR-3UTR CCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTCAGAAGGGCGAGATGTaGCAGAAAGGAGAATGTGGG +
Preference number: 2 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPQKGEM*QKGECG
Trigger: CCCACATTCTCCTTTCTGCCACATCTCGCCCTTCTG...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
3UTR-3UTR TCA 90 bp CCTGAAGTGCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTGAAAACAATTTCTTGCTTTGCCAGTaGTGGCAGGTTTTAAGAACC +
Preference number: 2 (lower is better)
Translates to: PEVLLLLLLVYLPLPENNFLLCQ*WQVLRT
Trigger: GGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAA...ATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGCACTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515404.5
3UTR CCA 72 bp TCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTaGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCA +
Preference number: 3 (lower is better)
Translates to: SGTQGLRMHSSP*PHVPGLGRGRP
Trigger: TGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 72 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTaGGGAGAGGGAGACCATTCAAAAGCCTGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GCTVHLGLMYLG*GEGDHSKACAW
Trigger: CCAAGCACAGGCTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGAGTCCTGGCACGGGGTaGAGTGAAGTTCTTGTGAGA +
Preference number: 3 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLSPGTG*SEVLVR
Trigger: TCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTGGCAGTCATGGTGCCTaGCCATGTAGGGCACATAGC +
Preference number: 3 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSGSHGA*PCRAHS
Trigger: GCTATGTGCCCTACATGGCAAGGCACCATGACTGCC...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGATGCACAGTTCACCTaGGCCTCATGTACCTGGGCT +
Preference number: 3 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQDAQFT*ASCTWA
Trigger: AGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATC...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR GCA 72 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATaGACAGTTCACCTTGGCCTCATGTACCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LRKETQGHKVSG*TVHLGLMYLGW
Trigger: CCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 72 bp TCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTaGGCTGGGGAGAGGGAGACCATTCAAAAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: SQDAQFTLASCT*AGERETIQKPV
Trigger: CACAGGCTTTTGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCGGCAGTCATGGTGCCTaGCCATGTAGGGCACATAGC +
Preference number: 3 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIGSHGA*PCRAHS
Trigger: GCTATGTGCCCTACATGGCAAGGCACCATGACTGCC...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR GCA 72 bp GTGGGAATGTGTGAGTATCCCACAGCCAGCTCACAGTaGAGCTTGCACTCAGAAAGGAGACTCAGGGACACA +
Preference number: 3 (lower is better)
Translates to: VGMCEYPTASSQ*SLHSERRLRDT
Trigger: TGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGGGATACTCACACATTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCAGTCCTGGCACGGGGTaGAGTGAAGTTCTTGTGAGA +
Preference number: 3 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGSPGTG*SEVLVR
Trigger: TCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 72 bp TCCAGTGAGTTCATGGCCTTGAGTTCACTCCTGTCCTaGATTTCTCCCAGTGCAGGTCCAGAAGGGCGAGAT +
Preference number: 3 (lower is better)
Translates to: SSEFMALSSLLS*ISPSAGPEGRD
Trigger: ATCTCGCCCTTCTGGACCTGCACTGGGAGAAATTCAGGACAGGAGTGAACTCAAGGCCATGAACTCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR GCA 72 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTaGCATGTAGGGCACATAGCCTGCTTTAAGAAAAGA +
Preference number: 3 (lower is better)
Translates to: PFLASRWAVMVP*HVGHIACFKKR
Trigger: TCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 72 bp CTCATAACTAATCCCTGTGCCCCAGGAACTCCATTATaGGCCTCAAGAGTCCTCCTTAAGGTATTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LITNPCAPGTPL*ASRVLLKVFSW
Trigger: CCAGCTGAATACCTTAAGGAGGACTCTTGAGGCTCATAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CCA 72 bp AACAAAAGCCTGTGCTTCAACCTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAAC +
Preference number: 3 (lower is better)
Translates to: NKSLCFNLTLQP*FLPVLSLGLRN
Trigger: GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTTGAAGCACAGGCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATAGGAAGCTGAGGCTGTaGTCCAGGCCACTGCTGAGT +
Preference number: 3 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNRKLRL*SRPLLS
Trigger: ACTCAGCAGTGGCCTGGACAACAGCCTCAGCTTCCT...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 72 bp GTGCCTAAAAATGGAAATCCAGTGAGTTCATGGCCTTaGGTTCACTCCTGTCCTGAATTTCTCCCAGTGCAG +
Preference number: 3 (lower is better)
Translates to: VPKNGNPVSSWP*VHSCPEFLPVQ
Trigger: CTGCACTGGGAGAAATTCAGGACAGGAGTGAACTCAAGGCCATGAACTCACTGGATTTCCATTTTTAGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 72 bp AAACATCCCTATGGGTGCCTAAAAATGGAAATCCAGTaGGTTCATGGCCTTGAGTTCACTCCTGTCCTGAAT +
Preference number: 3 (lower is better)
Translates to: KHPYGCLKMEIQ*VHGLEFTPVLN
Trigger: ATTCAGGACAGGAGTGAACTCAAGGCCATGAACTCACTGGATTTCCATTTTTAGGCACCCATAGGGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR-3UTR CAA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTAGGCAGGAGAATTGCTaGAACCTGGGAGTCGGAGGT +
Preference number: 3 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPRQENC*NLGVGG
Trigger: ACCTCCGACTCCCAGGTTCAAGCAATTCTCCTGCCT...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
3UTR TCA 72 bp CAATCACATGGTACCCATGAACCACTCCACTTTTCCTaGAGTGCTACTACTTCTGCTCTTAGTTTATCTTCC +
Preference number: 3 (lower is better)
Translates to: QSHGTHEPLHFS*SATTSALSLSS
Trigger: GGAAGATAAACTAAGAGCAGAAGTAGTAGCACTTCAGGAAAAGTGGAGTGGTTCATGGGTACCATGTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
3UTR CCA 72 bp TTCTCCTCAGAAACTTACATCCTAAAAACATCCCTATaGGTGCCTAAAAATGGAAATCCAGTGAGTTCATGG +
Preference number: 3 (lower is better)
Translates to: FSSETYILKTSL*VPKNGNPVSSW
Trigger: CCATGAACTCACTGGATTTCCATTTTTAGGCACCCATAGGGATGTTTTTAGGATGTAAGTTTCTGAGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR TCA 72 bp GCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTaGAAACAATACCAAAGATACAAGTTCAACTCTAAC +
Preference number: 3 (lower is better)
Translates to: ATTSALSLSSLT*KQYQRYKFNSN
Trigger: GTTAGAGTTGAACTTGTATCTTTGGTATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCAGACAGGTGGGGCCCTaGGGGACCCTATTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPRQVGP*GTLLGR
Trigger: TCTGCCTAATAGGGTCCCCCAGGGCCCCACCTGTCT...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGAGACAGGTGGGGCCCTaGGGGACCCTATTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWRQVGP*GTLLGR
Trigger: TCTGCCTAATAGGGTCCCCCAGGGCCCCACCTGTCT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGCCCGTAGCCCTTGCTaGAACTCCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPARSPC*NSTFPR
Trigger: TCTTGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGACAGCCCGTAGCCCTTaGTGCAACTCCACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWTARSP*CNSTFP
Trigger: TGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGCTGT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTCAAAAGCCTGTGCTTaGCCGGGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWSKACA*PGVVAH
Trigger: GTGAGCCACCACACCCGGCCAAGCACAGGCTTTTGA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CAA 72 bp CTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTaGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: LRDTRSQDAQFT*ASCTWAGERET
Trigger: GGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGCCTTTGCTGCTTTCTaGGCCTGGTACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPAFAAF*AWYSCF
Trigger: GAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATGCCCGTAGCCCTTGCTaGAACTCCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHARSPC*NSTFPR
Trigger: TCTTGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGC...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCCTCATGTACCTGGGCTaGGGAGAGGGAGACCATTCA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPLMYLG*GEGDHS
Trigger: TGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAG...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTCAGGTACCAGCAGTTaGGGCTGTGTCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWSGTSS*GCVETW
Trigger: CCAGGTTTCGACACAGCCCCAACTGCTGGTACCTGA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS-3UTR TCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCCTGGTGACTTCAGTCTaGCCACTAGCCACCTGCATA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPLVTSV*PLATCI
Trigger: TATGCAGGTGGCTAGTGGTCAGACTGAAGTCACCAG...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGACAGCCCGTAGCCCTTaGTGCAACTCCACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLTARSP*CNSTFP
Trigger: TGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGCTGT...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGTGGCGATGTCCTCTaGTTCACAGGTGGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWGGDVL*FTGGEF
Trigger: AAACTCTCCACCTGTGAAGCAGAGGACATCGCCACC...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGGCTTGCTCCCTCTGTTaGTGTTCTCTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGACSLC*CSLWIN
Trigger: GTTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGC...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGGCAGATGCCTTTGCTaGTTTCTGAGCCTGGTACTC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPGRCLC*FLSLVL
Trigger: GAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGTCAGGTACCAGCAGTTaGGGCTGTGTCGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGSGTSS*GCVETC
Trigger: ACAAGTTTCGACACAGCCCCAACTGCTGGTACCTGA...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGATCAGAGGCATGTTGTaGTACACAGCCCGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWIRGML*YTARSP
Trigger: AGGGCTACGGGCTGTGTACCACAACATGCCTCTGAT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTGGAGAGTTTTTCCTTaGCAAGCTGGGTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWWRVFP*QAGWSD
Trigger: GTCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGGGCAGGAGAATTGCTTaGACCTGGGAGTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGGRRIA*TWESEV
Trigger: AACCTCCGACTCCCAGGTTCAAGCAATTCTCCTGCC...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATAGCCCGTAGCCCTTGCTaGAACTCCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIARSPC*NSTFPR
Trigger: TCTTGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGC...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGCTTGCTCCCTCTGTTaGTGTTCTCTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWACSLC*CSLWIN
Trigger: GTTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGC...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGTTAGGCAGATGCCTTTaGTGCTTTCTGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGLGRCL*CFLSLV
Trigger: TACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAA...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATCACAAGGTCTCAGGATaGACAGTTCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHHKVSG*TVHLGL
Trigger: GAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTG...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGCTCACAGTGCAGCTTaGACTCAGAAAGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWAHSAA*TQKGDS
Trigger: TGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGC...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTCAGGTACCAGCAGTTaGGGCTGTGTCGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPSGTSS*GCVETC
Trigger: ACAAGTTTCGACACAGCCCCAACTGCTGGTACCTGA...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATATCAGAGGCATGTTGTaGTACACAGCCCGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHIRGML*YTARSP
Trigger: AGGGCTACGGGCTGTGTACCACAACATGCCTCTGAT...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGATTCTGCTCATAGGTaGCGATGTCCTCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPDSAHR*RCPLLH
Trigger: GTGAAGCAGAGGACATCGCCACCTATGAGCAGAATC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTAGACAGGTGGGGCCCTaGGGGACCCTATTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSRQVGP*GTLLGR
Trigger: TCTGCCTAATAGGGTCCCCCAGGGCCCCACCTGTCT...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGCTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCA +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGLTLQP*FLPVLS
Trigger: TGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAG...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGCTCATGTACCTGGGCTaGGGAGAGGGAGACCATTCA +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGLMYLG*GEGDHS
Trigger: TGAATGGTCTCCCTCTCCCCAGCCCAGGTACATGAG...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCAATCGTTCCAGGTATTaGGGAAGCTTGGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPNRSRY*GSLDCS
Trigger: AGAGCAGTCCAAGCTTCCTCAATACCTGGAACGATT...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATGTGAGTTCATGGCCTTaGGTTCACTCCTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHVSSWP*VHSCPE
Trigger: TTCAGGACAGGAGTGAACTCAAGGCCATGAACTCAC...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCACCTTCCCAAGAAGTaGATAGCCATACAACTGGGA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWHLPKK*IAIQLG
Trigger: TCCCAGTTGTATGGCTATGCACTTCTTGGGAAGGTG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTCATCATTTTGGGACTaGTCCTCTGAAGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPSSFWD*SSEAPS
Trigger: TGATGGGGCTTCAGAGGAGCAGTCCCAAAATGATGA...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGTACAAGGTCTAGATaGCACTGCTGCAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPCTRSR*HCCRFC
Trigger: GCAGAATCTGCAGCAGTGGCATCTAGACCTTGTACA...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTTAGGCAGATGCCTTTaGTGCTTTCTGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWLGRCL*CFLSLV
Trigger: TACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGCTGAATTTCTCCCAGTaGAGGTCCAGAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLLNFSQ*RSRRAR
Trigger: TCTCGCCCTTCTGGACCTGCACTGGGAGAAATTCAG...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGTCTGTCAAGGTAGCCTaGTTTCCATATCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGSVKVA*FPYQRH
Trigger: ATGCCTCTGATATGGAAACCAGGCTACCTTGACAGA...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGGTATTGAGGAAGCTTaGACTGCTCTGTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPGIEEA*TALFPR
Trigger: TCGAGGAAACAGAGCAGTCCAAGCTTCCTCAATACC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGTATTGAGGAAGCTTaGACTGCTCTGTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWGIEEA*TALFPR
Trigger: TCGAGGAAACAGAGCAGTCCAAGCTTCCTCAATACC...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWLTLQP*FLPVLS
Trigger: TGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGCAGAAGGGCGAGATGTaGCAGAAAGGAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLQKGEM*QKGECG
Trigger: CCCACATTCTCCTTTCTGCCACATCTCGCCCTTCTG...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGAVYIG*RKQVSF
Trigger: AAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGC...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGCATACAACTGGGAACTaGAACCCACTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGHTTGN*NPLSSF
Trigger: AAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATG...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGATTTTGCCCAGAGCTTaGAGCTTAGAATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWILPRA*SLECKA
Trigger: GGCCTTACATTCTAAGCTTCAAGCTCTGGGCAAAAT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR TCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTGGCAGGAGAATTGCTTaGACCTGGGAGTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSGRRIA*TWESEV
Trigger: AACCTCCGACTCCCAGGTTCAAGCAATTCTCCTGCC...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACGGCGGGCAGATCACTTaGGGTCAGGAGGTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNGGQIT*GQEVET
Trigger: GGTCTCAACCTCCTGACCTCAAGTGATCTGCCCGCC...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGAATGTGGGAATGTGTaGGTATCCCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQECGNV*VSHSQL
Trigger: GAGCTGGCTGTGGGATACTCACACATTCCCACATTC...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCTGTGGATTGCTGGATaGGCATTCTCCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWLWIAG*AFSLFV
Trigger: TACAAAAAGGGAGAATGCTCATCCAGCAATCCACAG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTCCTCGATGTCTAACTaGTCCACCAGTTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPSSMSN*STSFSD
Trigger: GTCAGAAAAACTGGTGGAGCAGTTAGACATCGAGGA...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTGCAGTCATGGTGCCTTaGCATGTAGGGCACATAGCC +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSAVMVP*HVGHIA
Trigger: GGCTATGTGCCCTACATGGCAAGGCACCATGACTGC...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCCTGGGAGTCGGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGILGVGG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCCGACTCCCAG...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAACTGAATTTCTCCCAGTaGAGGTCCAGAAGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQLNFSQ*RSRRAR
Trigger: TCTCGCCCTTCTGGACCTGCACTGGGAGAAATTCAG...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTTGTCTTCATCATTTTaGGACTGCTCCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWLSSSF*DCSSEA
Trigger: GGCTTCAGAGGAGCAGTCCCAAAATGATGAAGACAA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATATTCTTGGCATCTCGATaGGCAGTCATGGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIFLASR*AVMVPC
Trigger: GCAAGGCACCATGACTGCCCATCGAGATGCCAAGAA...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAATTCTTGGCATCTCGATaGGCAGTCATGGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQFLASR*AVMVPC
Trigger: GCAAGGCACCATGACTGCCCATCGAGATGCCAAGAA...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGTCCCAGTACTGTCACTaGGTCTTAGGAACTTTAATG +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGSQYCH*VLGTLM
Trigger: CATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGA...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAATGCACAGTTCACCTTaGCCTCATGTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQMHSSP*PHVPGL
Trigger: CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCAT...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGGCTGTGTCGAAACCTaGAATAATTCTGTGGATTGC +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPGCVET*NNSVDC
Trigger: GCAATCCACAGAATTATTCCAGGTTTCGACACAGCC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAATCGTTCCAGGTATTaGGGAAGCTTGGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGNRSRY*GSLDCS
Trigger: AGAGCAGTCCAAGCTTCCTCAATACCTGGAACGATT...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACATGGGTAGAGGAAGCTaGGGCTGTTGTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNMGRGS*GCCPGH
Trigger: GTGGCCTGGACAACAGCCTCAGCTTCCTCTACCCAT...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCGCCTGTGCTTCAACCTaGCTCTTCAGCCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGACAST*LFSLGF
Trigger: GAAACCAAGGCTGAAGAGTCAGGTTGAAGCACAGGC...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGGGCGGGCAGATCACTTaGGGTCAGGAGGTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEGGQIT*GQEVET
Trigger: GGTCTCAACCTCCTGACCTCAAGTGATCTGCCCGCC...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAAGTTCACTCCTGTCCTaGATTTCTCCCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQSSLLS*ISPSAG
Trigger: ACCTGCACTGGGAGAAATTCAGGACAGGAGTGAACT...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGTACCTACTTGATAAATaGGCTGAGACGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGYLLDK*AETMFW
Trigger: CCAAAACATCGTCTCAGCTCATTTATCAAGTAGGTA...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGACTTCAAAGGCTTCTTaGATCATGACCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGTSKAS*IMTSKT
Trigger: GGTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGT...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATTCCTCGATGTCTAACTaGTCCACCAGTTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHSSMSN*STSFSD
Trigger: GTCAGAAAAACTGGTGGAGCAGTTAGACATCGAGGA...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACCTGGGAGTCGGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNLGVGG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCCGACTCCCAG...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGCTCACAGTGCAGCTTaGACTCAGAAAGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQAHSAA*TQKGDS
Trigger: TGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGC...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTACAGCCAGCTCACAGTaGAGCTTGCACTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSTASSQ*SLHSER
Trigger: CCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGT...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATATTCCATAGCCCTTCTTaGCATCTCGATGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIFHSPS*HLDGQS
Trigger: TGACTGCCCATCGAGATGCCAAGAAGGGCTATGGAA...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
3UTR CAA 72 bp ATGTGTGAGTATCCCACAGCCAGCTCACAGTGCAGCTaGCACTCAGAAAGGAGACTCAGGGACACAAGGTCT +
Preference number: 4 (lower is better)
Translates to: MCEYPTASSQCS*HSERRLRDTRS
Trigger: AGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGGGATACTCACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGATTTTGCCCAGAGCTTaGAGCTTAGAATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLILPRA*SLECKA
Trigger: GGCCTTACATTCTAAGCTTCAAGCTCTGGGCAAAAT...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGATTTTGCCCAGAGCTTaGAGCTTAGAATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGILPRA*SLECKA
Trigger: GGCCTTACATTCTAAGCTTCAAGCTCTGGGCAAAAT...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCTGGAGAGTTTTTCCTTaGCAAGCTGGGTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGWRVFP*QAGWSD
Trigger: GTCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCA...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTCCAGGAACTCCATTATaGGCCTCAAGAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSPGTPL*ASRVLL
Trigger: AAGGAGGACTCTTGAGGCTCATAATGGAGTTCCTGG...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCGTGAGTTCATGGCCTTaGGTTCACTCCTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGVSSWP*VHSCPE
Trigger: TTCAGGACAGGAGTGAACTCAAGGCCATGAACTCAC...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPVKVIL*MIYLFP
Trigger: CGGGAAGAGATAGATCATGCAGAGTATTACCTTTAC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR GCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAACACCTTCCCAAGAAGTaGATAGCCATACAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQHLPKK*IAIQLG
Trigger: TCCCAGTTGTATGGCTATGCACTTCTTGGGAAGGTG...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATATCATCATTTTGGGACTaGTCCTCTGAAGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHISSFWD*SSEAPS
Trigger: TGATGGGGCTTCAGAGGAGCAGTCCCAAAATGATGA...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCGGTGGCGATGTCCTCTaGTTCACAGGTGGAGAGTTT +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIGGDVL*FTGGEF
Trigger: AAACTCTCCACCTGTGAAGCAGAGGACATCGCCACC...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCGGCAGATGCCTTTGCTaGTTTCTGAGCCTGGTACTC +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIGRCLC*FLSLVL
Trigger: GAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCC...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACGCAGTCATGGTGCCTTaGCATGTAGGGCACATAGCC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNAVMVP*HVGHIA
Trigger: GGCTATGTGCCCTACATGGCAAGGCACCATGACTGC...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGAATAATTCTGTGGATTaGTGGATGAGCATTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWNNSVD*WMSILP
Trigger: AGGGAGAATGCTCATCCAGCAATCCACAGAATTATT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS-3UTR CCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGTCTGTCAAGGTAGCCTaGTTTCCATATCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLSVKVA*FPYQRH
Trigger: ATGCCTCTGATATGGAAACCAGGCTACCTTGACAGA...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGTCTGTCAAGGTAGCCTaGTTTCCATATCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGSVKVA*FPYQRH
Trigger: ATGCCTCTGATATGGAAACCAGGCTACCTTGACAGA...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGTTGTCTTCATCATTTTaGGACTGCTCCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLLSSSF*DCSSEA
Trigger: GGCTTCAGAGGAGCAGTCCCAAAATGATGAAGACAA...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGTTTTCCTTGACAAGCTaGGTGGTCAGACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWFSLTS*VVRLKR
Trigger: TCTTTTAAGTCTGACCACCCAGCTTGTCAAGGAAAA...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CCA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATATTAGAAAGGTGTGGTaGTATGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHIRKVW*YAPVIP
Trigger: TGGGATTACAGGTGCATACCACCACACCTTTCTAAT...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGAVYIG*RKQVSF
Trigger: AAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGC...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAAAATGGAAATCCAGTaGGTTCATGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGKMEIQ*VHGLEF
Trigger: GAACTCAAGGCCATGAACTCACTGGATTTCCATTTT...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCTGTACAAGGTCTAGATaGCACTGCTGCAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGCTRSR*HCCRFC
Trigger: GCAGAATCTGCAGCAGTGGCATCTAGACCTTGTACA...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCATAGTAAGCAAAATCTaGTCTGAACCCTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPIVSKI*SEPFHR
Trigger: TCTGTGAAAGGGTTCAGAGCAGATTTTGCTTACTAT...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTGCCTAATCCAGGTGTaGATAGTCCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSCLIQV*IVQFLR
Trigger: CCTGAGAAACTGGACTATCCACACCTGGATTAGGCA...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAATTGTCTTCATCATTTTaGGACTGCTCCTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQLSSSF*DCSSEA
Trigger: GGCTTCAGAGGAGCAGTCCCAAAATGATGAAGACAA...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCGGTATTGAGGAAGCTTaGACTGCTCTGTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGGIEEA*TALFPR
Trigger: TCGAGGAAACAGAGCAGTCCAAGCTTCCTCAATACC...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGATTAGAAAGGTGTGGTaGTATGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGIRKVW*YAPVIP
Trigger: TGGGATTACAGGTGCATACCACCACACCTTTCTAAT...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATAGCAGAAAGGAGAATGTaGGAATGTGTGAGTATCCCA +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIAERRM*ECVSIP
Trigger: TGGGATACTCACACATTCCCACATTCTCCTTTCTGC...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAAGGCTTCTTGCATCATaGCCTCAAAAACCACAGATA +
Preference number: 4 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQRLLAS*PQKPQI
Trigger: TATCTGTGGTTTTTGAGGTCATGATGCAAGAAGCCT...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATACATACAACTGGGAACTaGAACCCACTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIHTTGN*NPLSSF
Trigger: AAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATG...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTGGAGAGTTTTTCCTTaGCAAGCTGGGTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNWRVFP*QAGWSD
Trigger: GTCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCA...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGACTTCAAAGGCTTCTTaGATCATGACCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGTSKAS*IMTSKT
Trigger: GGTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGT...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCCTCGATGTCTAACTaGTCCACCAGTTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSSSMSN*STSFSD
Trigger: GTCAGAAAAACTGGTGGAGCAGTTAGACATCGAGGA...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCTTAGGCAGATGCCTTTaGTGCTTTCTGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGILGRCL*CFLSLV
Trigger: TACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAA...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGATCAGAGGCATGTTGTaGTACACAGCCCGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEIRGML*YTARSP
Trigger: AGGGCTACGGGCTGTGTACCACAACATGCCTCTGAT...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACGATTCTGCTCATAGGTaGCGATGTCCTCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNDSAHR*RCPLLH
Trigger: GTGAAGCAGAGGACATCGCCACCTATGAGCAGAATC...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTGGAGGCAGCCATCTTaGAGCGTACCAAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNWRQPS*SVPKGT
Trigger: TGTTCCTTTTGGTACGCTCCAAGATGGCTGCCTCCA...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457646.8
CDS-3UTR TCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGAVYIG*RKQVSF
Trigger: AAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGC...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCATACAACTGGGAACTaGAACCCACTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGHTTGN*NPLSSF
Trigger: AAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATG...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACAATCGTTCCAGGTATTaGGGAAGCTTGGACTGCTCT +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNNRSRY*GSLDCS
Trigger: AGAGCAGTCCAAGCTTCCTCAATACCTGGAACGATT...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAATGGGTAGAGGAAGCTaGGGCTGTTGTCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLMGRGS*GCCPGH
Trigger: GTGGCCTGGACAACAGCCTCAGCTTCCTCTACCCAT...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGTCATATTTTAGACACTaGCTAATCCAGGTGTGGATA +
Preference number: 4 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLSYFRH*LIQVWI
Trigger: TATCCACACCTGGATTAGGCAGTGTCTAAAATATGA...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTCATCATTTTGGGACTaGTCCTCTGAAGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNSSFWD*SSEAPS
Trigger: TGATGGGGCTTCAGAGGAGCAGTCCCAAAATGATGA...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTGTAGGGCACATAGCCTaGTTTAAGAAAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSVGHIA*FKKRRW
Trigger: CCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTAC...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATAAAACATCCCTATGGGTaGCTAAAAATGGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIKHPYG*LKMEIQ
Trigger: CTGGATTTCCATTTTTAGGCACCCATAGGGATGTTT...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTGCCTAATCCAGGTGTaGATAGTCCAGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNCLIQV*IVQFLR
Trigger: CCTGAGAAACTGGACTATCCACACCTGGATTAGGCA...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTATCAAAAGCCTGTGCTTaGCCGGGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLSKACA*PGVVAH
Trigger: GTGAGCCACCACACCCGGCCAAGCACAGGCTTTTGA...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAGCCTTTGCTGCTTTCTaGGCCTGGTACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLAFAAF*AWYSCF
Trigger: GAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGC...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTAAACATCCCTATGGGTaGCTAAAAATGGAAATCCAG +
Preference number: 4 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSKHPYG*LKMEIQ
Trigger: CTGGATTTCCATTTTTAGGCACCCATAGGGATGTTT...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCTTTTCCTTGACAAGCTaGGTGGTCAGACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: LRKETQGHKVSGCTVHLGFSLTS*VVRLKR
Trigger: TCTTTTAAGTCTGACCACCCAGCTTGTCAAGGAAAA...GCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATGCCTTTGCTGCTTTCTaGGCCTGGTACTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNAFAAF*AWYSCF
Trigger: GAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGC...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAGAATGTGGGAATGTGTaGGTATCCCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLECGNV*VSHSQL
Trigger: GAGCTGGCTGTGGGATACTCACACATTCCCACATTC...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIVKVIL*MIYLFP
Trigger: CGGGAAGAGATAGATCATGCAGAGTATTACCTTTAC...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCACTTCAAAGGCTTCTTaGATCATGACCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGITSKAS*IMTSKT
Trigger: GGTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGT...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAACAGCCAGCTCACAGTaGAGCTTGCACTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLTASSQ*SLHSER
Trigger: CCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGT...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCTTTTCCTTGACAAGCTaGGTGGTCAGACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIFSLTS*VVRLKR
Trigger: TCTTTTAAGTCTGACCACCCAGCTTGTCAAGGAAAA...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGGCAGAAAGGAGAATGTaGGAATGTGTGAGTATCCCA +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEAERRM*ECVSIP
Trigger: TGGGATACTCACACATTCCCACATTCTCCTTTCTGC...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATCTGGTGACTTCAGTCTaGCCACTAGCCACCTGCATA +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNLVTSV*PLATCI
Trigger: TATGCAGGTGGCTAGTGGTCAGACTGAAGTCACCAG...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAAGTTCACTCCTGTCCTaGATTTCTCCCAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLSSLLS*ISPSAG
Trigger: ACCTGCACTGGGAGAAATTCAGGACAGGAGTGAACT...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCAGAACTAGTTCTTGCTTTGCCAGTGATGGCAGGTTTTAAGAACCCTCTTTACCCACTCCACTTTTCCTaGAGTGCTACTACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PELVLALPVMAGFKNPLYPLHFS*SATTSA
Trigger: AGCAGAAGTAGTAGCACTTCAGGAAAAGTGGAGTGG...GTAAAGAGGGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR GCA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACAAAAACAAAAGCCTGTaGTTCAACCTGACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNKNKSL*FNLTLQ
Trigger: CTGAAGAGTCAGGTTGAAGCACAGGCTTTTGTTTTT...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CCAGAACTAGTTCTTGCTTTGCCAGTGATGGCAGGTTTTAAGAACCCTCTTTACACCAGAACTAGTTCTTaGTTTGCCAGTGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: PELVLALPVMAGFKNPLYTRTSS*FASDGR
Trigger: CCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGGT...GTAAAGAGGGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATATGCACAGTTCACCTTaGCCTCATGTACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNMHSSP*PHVPGL
Trigger: CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCAT...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATCAGAAGGGCGAGATGTaGCAGAAAGGAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNQKGEM*QKGECG
Trigger: CCCACATTCTCCTTTCTGCCACATCTCGCCCTTCTG...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp CCACCAGAACTAGTTCTTGCTTTGCCAGTGATGGCAGGTTTTAAGAACCCTCTTGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: PPELVLALPVMAGFKNPLAVYIG*RKQVSF
Trigger: AAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGC...AAGAGGGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR TCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGTACCTACTTGATAAATaGGCTGAGACGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEYLLDK*AETMFW
Trigger: CCAAAACATCGTCTCAGCTCATTTATCAAGTAGGTA...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATGCTTGCTCCCTCTGTTaGTGTTCTCTCTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNACSLC*CSLWIN
Trigger: GTTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGC...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGAAAAACAAAAGCCTGTaGTTCAACCTGACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEKNKSL*FNLTLQ
Trigger: CTGAAGAGTCAGGTTGAAGCACAGGCTTTTGTTTTT...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGAAGAGTACACTAACATaGTCCCGGAACATTTATTTC +
Preference number: 4 (lower is better)
Translates to: VPCHVGHIACFKKRRWVEKSTLT*SRNIYF
Trigger: GAAATAAATGTTCCGGGATCATGTTAGTGTACTCTT...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR GCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATCACCTTCCCAAGAAGTaGATAGCCATACAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNHLPKK*IAIQLG
Trigger: TCCCAGTTGTATGGCTATGCACTTCTTGGGAAGGTG...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR GCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTGGCAGATGCCTTTGCTaGTTTCTGAGCCTGGTACTC +
Preference number: 4 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPGRCLC*FLSLVL
Trigger: GAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCC...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR GCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTCACAAGGTCTCAGGATaGACAGTTCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPHKVSG*TVHLGL
Trigger: GAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTG...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR CCA 90 bp GTGCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTGAAAACAATACCAAATCAGGTACCAGCAGTTaGGGCTGTGTCGAAACTTGT +
Preference number: 4 (lower is better)
Translates to: VLLLLLLVYLPLPENNTKSGTSS*GCVETC
Trigger: ACAAGTTTCGACACAGCCCCAACTGCTGGTACCTGA...TTTGGTATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CCA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTATCCCAGTACTGTCACTaGGTCTTAGGAACTTTAATG +
Preference number: 4 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLSQYCH*VLGTLM
Trigger: CATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGA...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp TTAATACTGGAAAAGATTCTACTAGCTAGTCTCCCTAAACAGGGCCAGAACATCCATACAACTGGGAACTaGAACCCACTGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LILEKILLASLPKQGQNIHTTGN*NPLSSF
Trigger: AAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATG...GATGTTCTGGCCCTGTTTAGGGAGACTAGCTAGTAGAATCTTTTCCAGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR TCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATAAAATGGAAATCCAGTaGGTTCATGGCCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNKMEIQ*VHGLEF
Trigger: GAACTCAAGGCCATGAACTCACTGGATTTCCATTTT...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR TCA 90 bp TATGGAGTAACTGTAAGGCCATCAAGGTCTATTTTTATGTCTAAAAACGAAGGCATCACATGGTACCCATaGACCACTCCACTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: YGVTVRPSRSIFMSKNEGITWYP*TTPLFL
Trigger: CAGGAAAAGTGGAGTGGTTCATGGGTACCATGTGAT...GCCTTCGTTTTTAGACATAAAAATAGACCTTGATGGCCTTACAGTTACTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR GCA 90 bp GGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCTCATAACTAATGTAGGGCACATAGCCTaGTTTAAGAAAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: GFSQYCHWVLGTLMLITNVGHIA*FKKRRW
Trigger: CCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTAC...ATTAGTTATGAGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTTTCCATAGCCCTTCTTaGCATCTCGATGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPFHSPS*HLDGQS
Trigger: TGACTGCCCATCGAGATGCCAAGAAGGGCTATGGAA...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR TCA 90 bp CTCTCTTATGGAGTAACTGTAAGGCCATCAAGGTCTATTTTTATGTCTAAAAACTTCTTGCTTTGCCAGTaGTGGCAGGTTTTAAGAACC +
Preference number: 4 (lower is better)
Translates to: LSYGVTVRPSRSIFMSKNFLLCQ*WQVLRT
Trigger: GGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAA...GTTTTTAGACATAAAAATAGACCTTGATGGCCTTACAGTTACTCCATAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR GCA 90 bp CCTGAAGTGCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTGAAAACAATACTTCAAAGGCTTCTTaGATCATGACCTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: PEVLLLLLLVYLPLPENNTSKAS*IMTSKT
Trigger: GGTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGT...ATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGCACTTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515404.5
3UTR CAA 72 bp TATTATTACCTATATCCACCAGAACTAGTTCTTGCTTaGCCAGTGATGGCAGGTTTTAAGAACCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: YYYLYPPELVLA*PVMAGFKNPLY
Trigger: GTAAAGAGGGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGGTGGATATAGGTAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR GCA 90 bp GTGCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTGAAAACAATACCAAAGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VLLLLLLVYLPLPENNTKVKVIL*MIYLFP
Trigger: CGGGAAGAGATAGATCATGCAGAGTATTACCTTTAC...TTTGGTATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CCA 90 bp TATGGAGTAACTGTAAGGCCATCAAGGTCTATTTTTATGTCTAAAAACGAAGGCCTCTTTACTCTCTTATaGAGTAACTGTAAGGCCATC +
Preference number: 4 (lower is better)
Translates to: YGVTVRPSRSIFMSKNEGLFTLL*SNCKAI
Trigger: GATGGCCTTACAGTTACTCCATAAGAGAGTAAAGAG...GCCTTCGTTTTTAGACATAAAAATAGACCTTGATGGCCTTACAGTTACTCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR GCA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPVKVIL*MIYLFP
Trigger: CGGGAAGAGATAGATCATGCAGAGTATTACCTTTAC...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS TCA 90 bp ATCAGGGGCCTAATGAAGCTGTCCGGCCAACCTGCAGGAGAGAGCTaGGGAAGAACCACTTGCCGCGCCAGGAGCATCCCGCGCCGCACT +
Preference number: 5 (lower is better)
Translates to: IRGLMKLSGQPAGES*GRTTCRARSIPRRT
Trigger: AGTGCGGCGCGGGATGCTCCTGGCGCGGCAAGTGGTTCTTCCTCAGCTCTCTCCTGCAGGTTGGCCGGACAGCTTCATTAGGCCCCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523654.5
CDS-3UTR CAA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCCTGAGGAAGAACCACTaGCCGCGCCAGGAGCATCCC +
Preference number: 5 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPLRKNH*PRQEHP
Trigger: GGGATGCTCCTGGCGCGGCAAGTGGTTCTTCCTCAG...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000513900.5
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGAGGCAGGAGAATTGCTaGAACCTGGGAGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGRQENC*NLGVGG
Trigger: ACCTCCGACTCCCAGGTTCAAGCAATTCTCCTGCCT...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCCTCAGGTACCAGCAGTaGGGGCTGTGTCGAAACCTG +
Preference number: 5 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPLRYQQ*GLCRNL
Trigger: CAGGTTTCGACACAGCCCCAACTGCTGGTACCTGAG...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS GCA 90 bp AGACAGGTGGGGCCCTGGGGGACCCTATTAGGCAGATGCCTTTGCTaGTTTCTGAGCCTGGTACTCCTGCTTCGCTTGCTCCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: RQVGPWGTLLGRCLC*FLSLVLLLRLLPLL
Trigger: CAACAGAGGGAGCAAGCGAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAATAGGGTCCCCCAGGGCCCCACCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS CCA 90 bp AAGCAGGTATCTTTTACCGCGCCAGGAGCATCCCGCGCCGCACTATaGAGGCAGCCATCTTGGAGCGTACCAAAAGGAACAGCCAACGGG +
Preference number: 5 (lower is better)
Translates to: KQVSFTAPGASRAAL*RQPSWSVPKGTANG
Trigger: CCCGTTGGCTGTTCCTTTTGGTACGCTCCAAGATGGCTGCCTCCATAGTGCGGCGCGGGATGCTCCTGGCGCGGTAAAAGATACCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457646.8
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGCATATCAGAGGCATGTaGTGGTACACAGCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGHIRGM*WYTARS
Trigger: GCTACGGGCTGTGTACCACAACATGCCTCTGATATG...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGCGCTTGCTCCCTCTGTaGCTGTTCTCTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGRLLPL*LFSLDQ
Trigger: TTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGCG...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGAGTCCTGGCACGGGGTaGAGTGAAGTTCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGSPGTG*SEVLVR
Trigger: TCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS TCA 90 bp CAATGCGGCCAGGGGAGAGCCTTGGCAACTCCCCAGTGGGATCTGTaGTCTTCTTGGTGCCACATGAGTACACAGTGGACAGAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QCGQGRALATPQWDL*SSWCHMSTQWTELE
Trigger: CTCCAGCTCTGTCCACTGTGTACTCATGTGGCACCAAGAAGATCACAGATCCCACTGGGGAGTTGCCAAGGCTCTCCCCTGGCCGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CCA 90 bp CTACACCTGCTGCAGACTAGTAACAACGATGACTGGAGGACTTCCTaGCAATGCGGCCAGGGGAGAGCCTTGGCAACTCCCCAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: LHLLQTSNNDDWRTS*QCGQGRALATPQWD
Trigger: ATCCCACTGGGGAGTTGCCAAGGCTCTCCCCTGGCCGCATTGCCAGGAAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAGCAGGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCATATCAGAGGCATGTaGTGGTACACAGCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWHIRGM*WYTARS
Trigger: GCTACGGGCTGTGTACCACAACATGCCTCTGATATG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGGTGGAGAGTTTTTCCTaGACAAGCTGGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGVESFS*TSWVVR
Trigger: TCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCAC...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCGCTTGCTCCCTCTGTaGCTGTTCTCTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWRLLPL*LFSLDQ
Trigger: TTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGCG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGAGTCCTGGCACGGGGTaGAGTGAAGTTCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWSPGTG*SEVLVR
Trigger: TCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGCAGTCATGGTGCCTaGCCATGTAGGGCACATAGC +
Preference number: 5 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLGSHGA*PCRAHS
Trigger: GCTATGTGCCCTACATGGCAAGGCACCATGACTGCC...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCGTGGAGAGTTTTTCCTaGACAAGCTGGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPVESFS*TSWVVR
Trigger: TCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCAC...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGATTAGGCAGATGCCTTaGCTGCTTTCTGAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWIRQMP*LLSEPG
Trigger: ACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAAT...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp CCCTTCTTGGCATCTCGATGGGCAGTCATGGTGCCTTGCCATGTAGGGCACATAAGGAAGCTGAGGCTGTaGTCCAGGCCACTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: PFLASRWAVMVPCHVGHIRKLRL*SRPLLS
Trigger: ACTCAGCAGTGGCCTGGACAACAGCCTCAGCTTCCT...TATGTGCCCTACATGGCAAGGCACCATGACTGCCCATCGAGATGCCAAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGGATGCACAGTTCACCTaGGCCTCATGTACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGDAQFT*ASCTWA
Trigger: AGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATC...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCCACTTTCTCCATCACTaGAAGGGCTCTGTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPHFLHH*KGSVKV
Trigger: TACCTTGACAGAGCCCTTCAAGTGATGGAGAAAGTG...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp CTGCTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCAAATCGTTCCAGGTATaGAGGAAGCTTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: LLSPGTGLSEVLVRQVGPKSFQV*RKLGLL
Trigger: GAGCAGTCCAAGCTTCCTCAATACCTGGAACGATTT...GGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATATTAGGCAGATGCCTTaGCTGCTTTCTGAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHIRQMP*LLSEPG
Trigger: ACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAAT...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS CCA 90 bp ACACAAGCATTGCTACACCTGCTGCAGACTAGTAACAACGATGACTaGAGGACTTCCTGGCAATGCGGCCAGGGGAGAGCCTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: TQALLHLLQTSNNDD*RTSWQCGQGRALAT
Trigger: AGTTGCCAAGGCTCTCCCCTGGCCGCATTGCCAGGAAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAGCAGGTGTAGCAATGCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGCTGAGGAAGAACCACTaGCCGCGCCAGGAGCATCCC +
Preference number: 5 (lower is better)
Translates to: VPCHVGHIACFKKRRWVELRKNH*PRQEHP
Trigger: GGGATGCTCCTGGCGCGGCAAGTGGTTCTTCCTCAG...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR CAA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTCTCAGGTACCAGCAGTaGGGGCTGTGTCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSLRYQQ*GLCRNL
Trigger: CAAGTTTCGACACAGCCCCAACTGCTGGTACCTGAG...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGAGAGGGAGACCATAAATCGTTCCAGGTATaGAGGAAGCTTGGACTGCTC +
Preference number: 5 (lower is better)
Translates to: GCTVHLGLMYLGWGEGDHKSFQV*RKLGLL
Trigger: GAGCAGTCCAAGCTTCCTCAATACCTGGAACGATTT...ATGGTCTCCCTCTCCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGTGGAGAGTTTTTCCTaGACAAGCTGGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLVESFS*TSWVVR
Trigger: TCTGACCACCCAGCTTGTCAAGGAAAAACTCTCCAC...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCAGGAAGCTGAGGCTGTaGTCCAGGCCACTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIRKLRL*SRPLLS
Trigger: ACTCAGCAGTGGCCTGGACAACAGCCTCAGCTTCCT...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS TCA 90 bp CCTTGGCAACTCCCCAGTGGGATCTGTGATCTTCTTGGTGCCACATaGGTACACAGTGGACAGAGCTGGAGCCCTAACTCTGGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: PWQLPSGICDLLGAT*VHSGQSWSPNSGFK
Trigger: TTTGAAGCCAGAGTTAGGGCTCCAGCTCTGTCCACTGTGTACTCATGTGGCACCAAGAAGATCACAGATCCCACTGGGGAGTTGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp CTGAGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGCACTTCAAAGGCTTCTaGCATCATGACCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: LSPGTGLSEVLVRQVGPWHFKGF*HHDLKN
Trigger: GTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGTG...CCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGCACTTTCTCCATCACTaGAAGGGCTCTGTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLHFLHH*KGSVKV
Trigger: TACCTTGACAGAGCCCTTCAAGTGATGGAGAAAGTG...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp CCACAGCCAGCTCACAGTGCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAATTAGGCAGATGCCTTaGCTGCTTTCTGAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PQPAHSAACTQKGDSGTQIRQMP*LLSEPG
Trigger: ACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAAT...TTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCTGGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACGGCAGTCATGGTGCCTaGCCATGTAGGGCACATAGC +
Preference number: 5 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNGSHGA*PCRAHS
Trigger: GCTATGTGCCCTACATGGCAAGGCACCATGACTGCC...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCAGGCAGGAGAATTGCTaGAACCTGGGAGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: DFSLTTSHLHSSIALLGIRQENC*NLGVGG
Trigger: ACCTCCGACTCCCAGGTTCAAGCAATTCTCCTGCCT...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTATGGAGGCAGCCATCTaGGAGCGTACCAAAAGGAAC +
Preference number: 5 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSMEAAI*ERTKRN
Trigger: GTTCCTTTTGGTACGCTCCAAGATGGCTGCCTCCAT...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457646.8
CDS GCA 90 bp CTCTGCACCAAGAGATTAGGGAGGAAGCAGAGAATGAATAATGTCTaGAGGCTGCAGTTACAACCACGGGCAAGTGAGGCACCCCAGATG +
Preference number: 5 (lower is better)
Translates to: LCTKRLGRKQRMNNV*RLQLQPRASEAPQM
Trigger: CATCTGGGGTGCCTCACTTGCCCGTGGTTGTAACTGCAGCCTGCAGACATTATTCATTCTCTGCTTCCTCCCTAATCTCTTGGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp AGTCCTGGCACGGGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTGGGGGAGGGTATATAGGGCTTaGTCTTGTGCATCATATTTT +
Preference number: 5 (lower is better)
Translates to: SPGTGLSEVLVRQVGPWGRVYRA*SCASYF
Trigger: AAAATATGATGCACAAGACAAAGCCCTATATACCCT...CCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
CDS-3UTR CAA 90 bp GACTTCAGTCTGACCACTAGCCACCTGCATAGTTCCATAGCCCTTCTTGGCATCAGCTCACAGTGCAGCTaGCACTCAGAAAGGAGACTC +
Preference number: 5 (lower is better)
Translates to: DFSLTTSHLHSSIALLGISSQCS*HSERRL
Trigger: GAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCT...GATGCCAAGAAGGGCTATGGAACTATGCAGGTGGCTAGTGGTCAGACTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS GCA 90 bp AATGCAATCAGGGCACAAGAGGAAAGCCACCACTGCACCTCCTGGTaGAATCACATGGTACCCATGAACCACTCCACTTTTCCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: NAIRAQEESHHCTSW*NHMVPMNHSTFPEV
Trigger: CACTTCAGGAAAAGTGGAGTGGTTCATGGGTACCATGTGATTGCACCAGGAGGTGCAGTGGTGGCTTTCCTCTTGTGCCCTGATTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACCATATCAGAGGCATGTaGTGGTACACAGCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNHIRGM*WYTARS
Trigger: GCTACGGGCTGTGTACCACAACATGCCTCTGATATG...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS TCA 90 bp CTGCTTCCATCAGGGCTGAGTGAGGCTGCACGGCAAATGACACAATaGGAGCAAAGAGCTTCTGATCTGATGGCTGCTATCACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LLPSGLSEAARQMTQ*EQRASDLMAAITKN
Trigger: GTTCTTTGTGATAGCAGCCATCAGATCAGAAGCTCTTTGCTCTCATTGTGTCATTTGCCGTGCAGCCTCACTCAGCCCTGATGGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS GCA 90 bp TGTCTGATTTTCAATGCAATCAGGGCACAAGAGGAAAGCCACCACTaGACCTCCTGGTGCAATCACATGGTACCCATGAACCACTCCACT +
Preference number: 5 (lower is better)
Translates to: CLIFNAIRAQEESHH*TSWCNHMVPMNHST
Trigger: AGTGGAGTGGTTCATGGGTACCATGTGATTGCACCAGGAGGTGCAGTGGTGGCTTTCCTCTTGTGCCCTGATTGCATTGAAAATCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CCA 90 bp CAGGAGGTTGAGACCAGCCTGTGCTTCAACCTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACTTTAATGCT +
Preference number: 5 (lower is better)
Translates to: QEVETSLCFNLTLQP*FLPVLSLGLRNFNA
Trigger: AGCATTAAAGTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTTGAAGCACAGGCTGGTCTCAACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519874.2
CDS-3UTR CAA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGCGCTTGCTCCCTCTGTaGCTGTTCTCTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: VPCHVGHIACFKKRRWVERLLPL*LFSLDQ
Trigger: TTGATCCAGAGAGAACAGCAACAGAGGGAGCAAGCG...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GTGCCTTGCCATGTAGGGCACATAGCCTGCTTTAAGAAAAGAAGATGGGTAGAGAGTCCTGGCACGGGGTaGAGTGAAGTTCTTGTGAGA +
Preference number: 5 (lower is better)
Translates to: VPCHVGHIACFKKRRWVESPGTG*SEVLVR
Trigger: TCTCACAAGAACTTCACTCAACCCCGTGCCAGGACT...CTCTACCCATCTTCTTTTCTTAAAGCAGGCTATGTGCCCTACATGGCAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp ACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGGGGGCTCATTTTACCTACTaGATAAATGAGCTGAGACGA +
Preference number: 5 (lower is better)
Translates to: TQGLRMHSSPWPHVPGLGAHFTY*INELRR
Trigger: TCGTCTCAGCTCATTTATCAAGTAGGTAAAATGAGC...CCCCAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GGGACACAAGGTCTCAGGATGCACAGTTCACCTTGGCCTCATGTACCTGGGCTGAGGGTATATAGGGCTTaGTCTTGTGCATCATATTTT +
Preference number: 5 (lower is better)
Translates to: GTQGLRMHSSPWPHVPGLRVYRA*SCASYF
Trigger: AAAATATGATGCACAAGACAAAGCCCTATATACCCT...CAGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATCCTGAGACCTTGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS-3UTR CAA 90 bp GCAGCTTGCACTCAGAAAGGAGACTCAGGGACACAAGGTCTCAGGATGCACAGTCACTTCAAAGGCTTCTaGCATCATGACCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: AACTQKGDSGTQGLRMHSHFKGF*HHDLKN
Trigger: GTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGTG...ACTGTGCATCCTGAGACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS CCA 90 bp GCTTTGTCTTGTGCATCATATTTTAGACACTGCCTAATCCAGGTGTaGATAGTCCAGTTTCTCAGGTACCAGCAGTTGGGGCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: ALSCASYFRHCLIQV*IVQFLRYQQLGLCR
Trigger: TCGACACAGCCCCAACTGCTGGTACCTGAGAAACTGGACTATCCACACCTGGATTAGGCAGTGTCTAAAATATGATGCACAAGACAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515404.5
ENST00000519143.5
ENST00000522042.1
ENST00000522562.5
CDS-3UTR CAA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTACTCAGGTACCAGCAGTaGGGGCTGTGTCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLLRYQQ*GLCRNL
Trigger: CAAGTTTCGACACAGCCCCAACTGCTGGTACCTGAG...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS GCA 90 bp GAACCAGGGCCTCTGCTCACAAACCACAACAAAGTACATATTCTTTaGCCTGTCACTTCTGACCAATTCAGGCTGTATGACAGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: EPGPLLTNHNKVHIL*PVTSDQFRLYDSPE
Trigger: TTCAGGACTGTCATACAGCCTGAATTGGTCAGAAGTGACAGGGCAAAGAATATGTACTTTGTTGTGGTTTGTGAGCAGAGGCCCTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS-3UTR CAA 90 bp GTCTTAGGAACTTTAATGCTCATAACTAATCCCTGTGCCCCAGGAACTCCATTAAGCTCACAGTGCAGCTaGCACTCAGAAAGGAGACTC +
Preference number: 5 (lower is better)
Translates to: VLGTLMLITNPCAPGTPLSSQCS*HSERRL
Trigger: GAGTCTCCTTTCTGAGTGCAAGCTGCACTGTGAGCT...TAATGGAGTTCCTGGGGCACAGGGATTAGTTATGAGCATTAAAGTTCCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS GCA 90 bp AGAGCTTCTGATCTGATGGCTGCTATCACAAAGAACCAGGGCCTCTaGTCACAAACCACAACAAAGTACATATTCTTTGCCCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: RASDLMAAITKNQGL*SQTTTKYIFFALSL
Trigger: AAGTGACAGGGCAAAGAATATGTACTTTGTTGTGGTTTGTGAGCAGAGGCCCTGGTTCTTTGTGATAGCAGCCATCAGATCAGAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS-3UTR CAA 90 bp AACCTGACTCTTCAGCCTTGGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAACGCTCATTTTACCTACTaGATAAATGAGCTGAGACGA +
Preference number: 5 (lower is better)
Translates to: NLTLQPWFLPVLSLGLRNAHFTY*INELRR
Trigger: TCGTCTCAGCTCATTTATCAAGTAGGTAAAATGAGC...GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261413.10
ENST00000457646.8
CDS GCA 90 bp ACAAGGGTATATAGGGCTTTGTCTTGTGCATCATATTTTAGACACTaGCTAATCCAGGTGTGGATAGTCCAGTTTCTCAGGTACCAGCAG +
Preference number: 5 (lower is better)
Translates to: TRVYRALSCASYFRH*LIQVWIVQFLRYQQ
Trigger: CTGCTGGTACCTGAGAAACTGGACTATCCACACCTGGATTAGGCAGTGTCTAAAATATGATGCACAAGACAAAGCCCTATATACCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515404.5
ENST00000522042.1
ENST00000522562.5
CDS-3UTR CAA 90 bp GTGCTACTACTTCTGCTCTTAGTTTATCTTCCCTTACCTGAAAACAATACCAAACTCAGGTACCAGCAGTaGGGGCTGTGTCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: VLLLLLLVYLPLPENNTKLRYQQ*GLCRNL
Trigger: CAAGTTTCGACACAGCCCCAACTGCTGGTACCTGAG...TTTGGTATTGTTTTCAGGTAAGGGAAGATAAACTAAGAGCAGAAGTAGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS GCA 90 bp AGTGAGTCTCTGGAATGGGCACTTGCCTGGAATAATTCTGTGGATTaGTGGATGAGCATTCTCCCTTTTTGTAAAGGTAATACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SESLEWALAWNNSVD*WMSILPFCKGNTLH
Trigger: ATGCAGAGTATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGCAAGTGCCCATTCCAGAGACTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522404.5
CDS CCA 90 bp TTTCAACTTCCAGTAGTAATATGTCAGGTGAGTGAGTCTCTGGAATaGGCACTTGCCTGGAATAATTCTGTGGATTGCTGGATGAGCATT +
Preference number: 5 (lower is better)
Translates to: FQLPVVICQVSESLE*ALAWNNSVDCWMSI
Trigger: AATGCTCATCCAGCAATCCACAGAATTATTCCAGGCAAGTGCCCATTCCAGAGACTCACTCACCTGACATATTACTACTGGAAGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522404.5
CDS-3UTR CAA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTGATGCACAGTTCACCTaGGCCTCATGTACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPDAQFT*ASCTWA
Trigger: AGCCCAGGTACATGAGGCCAAGGTGAACTGTGCATC...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS-3UTR CAA 90 bp CCACCAGAACTAGTTCTTGCTTTGCCAGTGATGGCAGGTTTTAAGAACCCTCTTAGGGTATATAGGGCTTaGTCTTGTGCATCATATTTT +
Preference number: 5 (lower is better)
Translates to: PPELVLALPVMAGFKNPLRVYRA*SCASYF
Trigger: AAAATATGATGCACAAGACAAAGCCCTATATACCCT...AAGAGGGTTCTTAAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTCTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CAA 90 bp TTAATACTGGAAAAGATTCTACTAGCTAGTCTCCCTAAACAGGGCCAGAACATCCACTTCAAAGGCTTCTaGCATCATGACCTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: LILEKILLASLPKQGQNIHFKGF*HHDLKN
Trigger: GTTTTTGAGGTCATGATGCAAGAAGCCTTTGAAGTG...GATGTTCTGGCCCTGTTTAGGGAGACTAGCTAGTAGAATCTTTTCCAGTATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS-3UTR CAA 90 bp CATTATTACAATAAATCCCATAGTTTAATGGGGGAGGGTTTAAAGTACACTCCTCACTTTCTCCATCACTaGAAGGGCTCTGTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: HYYNKSHSLMGEGLKYTPHFLHH*KGSVKV
Trigger: TACCTTGACAGAGCCCTTCAAGTGATGGAGAAAGTG...AGGAGTGTACTTTAAACCCTCCCCCATTAAACTATGGGATTTATTGTAATAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261413.10
CDS TCA 90 bp GATAGATTTGTGCTTCTCAAAAACAAATTAGGCAGTCAGAAACAGTaGTCGCTTCTTTCAGCCCAGGGTGCAAAATTACGCTTTAATGAA +
Preference number: 5 (lower is better)
Translates to: DRFVLLKNKLGSQKQ*SLLSAQGAKLRFNE
Trigger: TTCATTAAAGCGTAATTTTGCACCCTGGGCTGAAAGAAGCGATCACTGTTTCTGACTGCCTAATTTGTTTTTGAGAAGCACAAATCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS-3UTR CAA 90 bp CTCTCTTATGGAGTAACTGTAAGGCCATCAAGGTCTATTTTTATGTCTAAAAACGAACTAGTTCTTGCTTaGCCAGTGATGGCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LSYGVTVRPSRSIFMSKNELVLA*PVMAGF
Trigger: AAAACCTGCCATCACTGGCAAAGCAAGAACTAGTTC...GTTTTTAGACATAAAAATAGACCTTGATGGCCTTACAGTTACTCCATAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515404.5
CDS CAA 90 bp TTACAGCTCGACCTCTCGGGGCGCCCAGAATTGGACGAATCCCTTTaGTCGCTCTCGACGACAGGACCGACGCTCCGCCTCCTCGCCCCG +
Preference number: 6 (lower is better)
Translates to: LQLDLSGRPELDESL*SLSTTGPTLRLLAP
Trigger: CGGGGCGAGGAGGCGGAGCGTCGGTCCTGTCGTCGAGAGCGACAAAAGGGATTCGTCCAATTCTGGGCGCCCCGAGAGGTCGAGCTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506957.1
CDS CAA 72 bp GACCTCTCGGGGCGCCCAGAATTGGACGAATCCCTTTaGTCGCTCTCGACGACAGGACCGACGCTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: DLSGRPELDESL*SLSTTGPTLRL
Trigger: GAGGCGGAGCGTCGGTCCTGTCGTCGAGAGCGACAAAAGGGATTCGTCCAATTCTGGGCGCCCCGAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506957.1
CDS GCA 72 bp GGGCCCTGGGGGACCCTATTAGGCAGATGCCTTTGCTaGTTTCTGAGCCTGGTACTCCTGCTTCGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: GPWGTLLGRCLC*FLSLVLLLRLL
Trigger: GAGCAAGCGAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAATAGGGTCCCCCAGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS GCA 72 bp GTGGGGCCCTGGGGGACCCTATTAGGCAGATGCCTTTaGTGCTTTCTGAGCCTGGTACTCCTGCTTCGCTTG +
Preference number: 6 (lower is better)
Translates to: VGPWGTLLGRCL*CFLSLVLLLRL
Trigger: CAAGCGAAGCAGGAGTACCAGGCTCAGAAAGCAGCAAAGGCATCTGCCTAATAGGGTCCCCCAGGGCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS CAA 72 bp TCTTTTACCTGCAGGAGAGAGCTGAGGAAGAACCACTaGCCGCGCCAGGAGCATCCCGCGCCGCACTATGGA +
Preference number: 6 (lower is better)
Translates to: SFTCRRELRKNH*PRQEHPAPHYG
Trigger: TCCATAGTGCGGCGCGGGATGCTCCTGGCGCGGCAAGTGGTTCTTCCTCAGCTCTCTCCTGCAGGTAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000513900.5
ENST00000522095.1
CDS CAA 90 bp AAGCAGGTATCTTTTACCTGCAGGAGAGAGCTGAGGAAGAACCACTaGCCGCGCCAGGAGCATCCCGCGCCGCACTATGGAGGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: KQVSFTCRRELRKNH*PRQEHPAPHYGGSH
Trigger: ATGGCTGCCTCCATAGTGCGGCGCGGGATGCTCCTGGCGCGGCAAGTGGTTCTTCCTCAGCTCTCTCCTGCAGGTAAAAGATACCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261413.10
ENST00000513900.5
ENST00000522095.1
CDS GCA 72 bp ACTAGTAACAACGATGACTGGAGGACTTCCTGGCAATaGGGCCAGGGGAGAGCCTTGGCAACTCCCCAGTGG +
Preference number: 6 (lower is better)
Translates to: TSNNDDWRTSWQ*GQGRALATPQW
Trigger: CCACTGGGGAGTTGCCAAGGCTCTCCCCTGGCCGCATTGCCAGGAAGTCCTCCAGTCATCGTTGTTACTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CCA 72 bp CTGCAGACTAGTAACAACGATGACTGGAGGACTTCCTaGCAATGCGGCCAGGGGAGAGCCTTGGCAACTCCC +
Preference number: 6 (lower is better)
Translates to: LQTSNNDDWRTS*QCGQGRALATP
Trigger: GGGAGTTGCCAAGGCTCTCCCCTGGCCGCATTGCCAGGAAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CAA 90 bp CCAGGGGAGAGCCTTGGCAACTCCCCAGTGGGATCTGTGATCTTCTaGGTGCCACATGAGTACACAGTGGACAGAGCTGGAGCCCTAACT +
Preference number: 6 (lower is better)
Translates to: PGESLGNSPVGSVIF*VPHEYTVDRAGALT
Trigger: AGTTAGGGCTCCAGCTCTGTCCACTGTGTACTCATGTGGCACCAAGAAGATCACAGATCCCACTGGGGAGTTGCCAAGGCTCTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS GCA 72 bp AGAGGCATGTTGTGGTACACAGCCCGTAGCCCTTGCTaGAACTCCACCTTCCCTTTAAGGTGCTTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGMLWYTARSPC*NSTFPLRCLGL
Trigger: CAGCCCCAAGCACCTTAAAGGGAAGGTGGAGTTGCAGCAAGGGCTACGGGCTGTGTACCACAACATGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS CCA 72 bp TTGCTACACCTGCTGCAGACTAGTAACAACGATGACTaGAGGACTTCCTGGCAATGCGGCCAGGGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: LLHLLQTSNNDD*RTSWQCGQGRA
Trigger: GGCTCTCCCCTGGCCGCATTGCCAGGAAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAGCAGGTGTAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS TCA 72 bp CAGGGGAGAGCCTTGGCAACTCCCCAGTGGGATCTGTaGTCTTCTTGGTGCCACATGAGTACACAGTGGACA +
Preference number: 6 (lower is better)
Translates to: QGRALATPQWDL*SSWCHMSTQWT
Trigger: TGTCCACTGTGTACTCATGTGGCACCAAGAAGATCACAGATCCCACTGGGGAGTTGCCAAGGCTCTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CCA 72 bp GGGTTGAGTGAAGTTCTTGTGAGACAGGTGGGGCCCTaGGGGACCCTATTAGGCAGATGCCTTTGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: GLSEVLVRQVGP*GTLLGRCLCCF
Trigger: AAAGCAGCAAAGGCATCTGCCTAATAGGGTCCCCCAGGGCCCCACCTGTCTCACAAGAACTTCACTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS CAA 72 bp AGCCTTGGCAACTCCCCAGTGGGATCTGTGATCTTCTaGGTGCCACATGAGTACACAGTGGACAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SLGNSPVGSVIF*VPHEYTVDRAG
Trigger: TCCAGCTCTGTCCACTGTGTACTCATGTGGCACCAAGAAGATCACAGATCCCACTGGGGAGTTGCCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS CCA 72 bp GAGACCAGCCTGTGCTTCAACCTGACTCTTCAGCCTTaGTTTCTCCCAGTACTGTCACTGGGTCTTAGGAAC +
Preference number: 6 (lower is better)
Translates to: ETSLCFNLTLQP*FLPVLSLGLRN
Trigger: GTTCCTAAGACCCAGTGACAGTACTGGGAGAAACCAAGGCTGAAGAGTCAGGTTGAAGCACAGGCTGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519874.2
CDS TCA 72 bp TCAGGGCTGAGTGAGGCTGCACGGCAAATGACACAATaGGAGCAAAGAGCTTCTGATCTGATGGCTGCTATC +
Preference number: 6 (lower is better)
Translates to: SGLSEAARQMTQ*EQRASDLMAAI
Trigger: GATAGCAGCCATCAGATCAGAAGCTCTTTGCTCTCATTGTGTCATTTGCCGTGCAGCCTCACTCAGCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS GCA 72 bp CTGCTGCAGATTCTGCTCATAGGTGGCGATGTCCTCTaGTTCACAGGTGGAGAGTTTTTCCTTGACAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLQILLIGGDVL*FTGGEFFLDKL
Trigger: CAGCTTGTCAAGGAAAAACTCTCCACCTGTGAAGCAGAGGACATCGCCACCTATGAGCAGAATCTGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS CCA 72 bp GGTCTAGATGCCACTGCTGCAGATTCTGCTCATAGGTaGCGATGTCCTCTGCTTCACAGGTGGAGAGTTTTT +
Preference number: 6 (lower is better)
Translates to: GLDATAADSAHR*RCPLLHRWRVF
Trigger: AAAAACTCTCCACCTGTGAAGCAGAGGACATCGCCACCTATGAGCAGAATCTGCAGCAGTGGCATCTAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000513900.5
ENST00000515226.5
CDS TCA 72 bp ACCACTGCACCTCCTGGTGCAATCACATGGTACCCATaGACCACTCCACTTTTCCTGAAGTGCTACTACTTC +
Preference number: 6 (lower is better)
Translates to: TTAPPGAITWYP*TTPLFLKCYYF
Trigger: GAAGTAGTAGCACTTCAGGAAAAGTGGAGTGGTTCATGGGTACCATGTGATTGCACCAGGAGGTGCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS GCA 72 bp GGAAGCTTGGACTGCTCTGTTTCCTCGATGTCTAACTaGTCCACCAGTTTTTCTGACCCCTGGTTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: GSLDCSVSSMSN*STSFSDPWLSS
Trigger: TGAAGACAACCAGGGGTCAGAAAAACTGGTGGAGCAGTTAGACATCGAGGAAACAGAGCAGTCCAAGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515226.5
CDS CAA 72 bp TATGTCTTCTGGGGAGGCAGCCACTTTCTCCATCACTaGAAGGGCTCTGTCAAGGTAGCCTGGTTTCCATAT +
Preference number: 6 (lower is better)
Translates to: YVFWGGSHFLHH*KGSVKVAWFPY
Trigger: ATATGGAAACCAGGCTACCTTGACAGAGCCCTTCAAGTGATGGAGAAAGTGGCTGCCTCCCCAGAAGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515226.5
ENST00000522562.5
CDS TCA 72 bp TTCTCTTGCTTCCCATTTGTGGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTTACCGCGCCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: FSCFPFVAVYIG*RKQVSFTAPGA
Trigger: TGCTCCTGGCGCGGTAAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457646.8
ENST00000515404.5
CDS TCA 72 bp TGCACGGCAAATGACACAATGAGAGCAAAGAGCTTCTaGTCTGATGGCTGCTATCACAAAGAACCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: CTANDTMRAKSF*SDGCYHKEPGP
Trigger: AGGCCCTGGTTCTTTGTGATAGCAGCCATCAGATCAGAAGCTCTTTGCTCTCATTGTGTCATTTGCCGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS CCA 72 bp TTTCTCCATCACTTGAAGGGCTCTGTCAAGGTAGCCTaGTTTCCATATCAGAGGCATGTTGTGGTACACAGC +
Preference number: 6 (lower is better)
Translates to: FLHHLKGSVKVA*FPYQRHVVVHS
Trigger: GCTGTGTACCACAACATGCCTCTGATATGGAAACCAGGCTACCTTGACAGAGCCCTTCAAGTGATGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515226.5
ENST00000522042.1
ENST00000522562.5
CDS CCA 72 bp TGTGCATCATATTTTAGACACTGCCTAATCCAGGTGTaGATAGTCCAGTTTCTCAGGTACCAGCAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CASYFRHCLIQV*IVQFLRYQQLG
Trigger: CCCCAACTGCTGGTACCTGAGAAACTGGACTATCCACACCTGGATTAGGCAGTGTCTAAAATATGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515404.5
ENST00000519143.5
ENST00000522042.1
ENST00000522562.5
CDS TCA 72 bp CCTTCCCAAGAAGTGCATAGCCATACAACTGGGAACTaGAACCCACTGAGTTCTTTTGTTTTAGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: PSQEVHSHTTGN*NPLSSFVLGLE
Trigger: TTCCAGGCCTAAAACAAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATGGCTATGCACTTCTTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000522042.1
CDS GCA 72 bp AACAAAGGGCAAAAACACAAGCATTGCTACACCTGCTaGAGACTAGTAACAACGATGACTGGAGGACTTCCT +
Preference number: 6 (lower is better)
Translates to: NKGQKHKHCYTC*RLVTTMTGGLP
Trigger: AGGAAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAGCAGGTGTAGCAATGCTTGTGTTTTTGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS GCA 72 bp GGAAACAAAGGGCAAAAACACAAGCATTGCTACACCTaGTGCAGACTAGTAACAACGATGACTGGAGGACTT +
Preference number: 6 (lower is better)
Translates to: GNKGQKHKHCYT*CRLVTTMTGGL
Trigger: AAGTCCTCCAGTCATCGTTGTTACTAGTCTGCAGCAGGTGTAGCAATGCTTGTGTTTTTGCCCTTTGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515226.5
CDS GCA 72 bp GATCTGATGGCTGCTATCACAAAGAACCAGGGCCTCTaGTCACAAACCACAACAAAGTACATATTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: DLMAAITKNQGL*SQTTTKYIFFA
Trigger: GGCAAAGAATATGTACTTTGTTGTGGTTTGTGAGCAGAGGCCCTGGTTCTTTGTGATAGCAGCCATCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000522562.5
CDS TCA 72 bp AGCTTAGAATGTAAGGCCTTAAATCGTTCCAGGTATTaGGGAAGCTTGGACTGCTCTGTTTCCTCGATGTCT +
Preference number: 6 (lower is better)
Translates to: SLECKALNRSRY*GSLDCSVSSMS
Trigger: AGACATCGAGGAAACAGAGCAGTCCAAGCTTCCTCAATACCTGGAACGATTTAAGGCCTTACATTCTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515226.5
CDS TCA 72 bp GCTTACCAAGAAGTGCATAGCCATACAACTGGGAACTaGAACCCACTGAGTTCTTTTGTTTTAGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: AYQEVHSHTTGN*NPLSSFVLGLE
Trigger: TTCCAGGCCTAAAACAAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATGGCTATGCACTTCTTGGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515226.5
ENST00000515404.5
CDS TCA 72 bp GGGCACTTGCCTGGAATAATTCTGTGGATTGCTGGATaGGCATTCTCCCTTTTTGTAAAGGTAATACTCTGC +
Preference number: 6 (lower is better)
Translates to: GHLPGIILWIAG*AFSLFVKVILC
Trigger: GCAGAGTATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGCAAGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522404.5
CDS TCA 72 bp GCTGATCAAGAAGTGCATAGCCATACAACTGGGAACTaGAACCCACTGAGTTCTTTTGTTTTAGGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: ADQEVHSHTTGN*NPLSSFVLGLE
Trigger: TTCCAGGCCTAAAACAAAAGAACTCAGTGGGTTTCAGTTCCCAGTTGTATGGCTATGCACTTCTTGATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522562.5
CDS GCA 72 bp GTTGGGGCTGTGTCGAAACTTGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCGAGAGGAAATGTTGTC +
Preference number: 6 (lower is better)
Translates to: VGAVSKLVKVIL*MIYLFPRGNVV
Trigger: GACAACATTTCCTCTCGGGAAGAGATAGATCATGCAGAGTATTACCTTTACAAGTTTCGACACAGCCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000515404.5
ENST00000519143.5
CDS TCA 72 bp TTCTCTTGCTTCCCATTTGTGGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTTACCAAAAGGAACAGC +
Preference number: 6 (lower is better)
Translates to: FSCFPFVAVYIG*RKQVSFTKRNS
Trigger: GCTGTTCCTTTTGGTAAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506957.1
CDS TCA 72 bp TTCTCTTGCTTCCCATTTGTGGCTGTCTACATAGGCTaGAGAAAGCAGGTATCTTTTACCTTGTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: FSCFPFVAVYIG*RKQVSFTLSPS
Trigger: AGAAGGAGACAAGGTAAAAGATACCTGCTTTCTTCAGCCTATGTAGACAGCCACAAATGGGAAGCAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523654.5
CDS GCA 72 bp TATAGGGCTTTGTCTTGTGCATCATATTTTAGACACTaGCTAATCCAGGTGTGGATAGTCCAGTTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: YRALSCASYFRH*LIQVWIVQFLR
Trigger: CCTGAGAAACTGGACTATCCACACCTGGATTAGGCAGTGTCTAAAATATGATGCACAAGACAAAGCCCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515404.5
ENST00000519143.5
ENST00000522042.1
ENST00000522562.5
CDS GCA 72 bp TGGGGCTGTGTCGAAACCTGGAATAATTCTGTGGATTaGTGGATGAGCATTCTCCCTTTTTGTAAAGGTAAT +
Preference number: 6 (lower is better)
Translates to: WGCVETWNNSVD*WMSILPFCKGN
Trigger: ATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGTTTCGACACAGCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS TCA 72 bp CTTAAAAGACCTTCTGACTCAATTTTGCCCAGAGCTTaGAGCTTAGAATGTAAGGCCTTAAATCGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LKRPSDSILPRA*SLECKALNRSR
Trigger: CCTGGAACGATTTAAGGCCTTACATTCTAAGCTTCAAGCTCTGGGCAAAATTGAGTCAGAAGGTCTTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261413.10
ENST00000457646.8
ENST00000508863.6
ENST00000513900.5
ENST00000515226.5
CDS TCA 72 bp GTGTCGAAACCTGGAATAATTCTGTGGATTGCTGGATaGGCATTCTCCCTTTTTGTAAAGGTAATACTCTGC +
Preference number: 6 (lower is better)
Translates to: VSKPGIILWIAG*AFSLFVKVILC
Trigger: GCAGAGTATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGTTTCGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS CCA 72 bp GGCTGTGTCGAAACCTGGAATAATTCTGTGGATTGCTaGATGAGCATTCTCCCTTTTTGTAAAGGTAATACT +
Preference number: 6 (lower is better)
Translates to: GCVETWNNSVDC*MSILPFCKGNT
Trigger: AGTATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGTTTCGACACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513900.5
CDS CCA 72 bp GAATGGGCACTTGCCTGGAATAATTCTGTGGATTGCTaGATGAGCATTCTCCCTTTTTGTAAAGGTAATACT +
Preference number: 6 (lower is better)
Translates to: EWALAWNNSVDC*MSILPFCKGNT
Trigger: AGTATTACCTTTACAAAAAGGGAGAATGCTCATCCAGCAATCCACAGAATTATTCCAGGCAAGTGCCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522404.5
CDS GCA 72 bp AATCAAATGGAAAACTTACTTGTAAAGGTAATACTCTaGATGATCTATCTCTTCCCGAGAGGAAATGTTGTC +
Preference number: 6 (lower is better)
Translates to: NQMENLLVKVIL*MIYLFPRGNVV
Trigger: GACAACATTTCCTCTCGGGAAGAGATAGATCATGCAGAGTATTACCTTTACAAGTAAGTTTTCCATTTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522095.1