RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPS23 (Homo sapiens)

Ensembl gene IDs: ENSG00000181610

Ensembl transcript IDs: ENST00000313608.13, ENST00000578444.1, ENST00000579380.1, ENST00000579768.1

Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTTTGTaGCCTTGGACTTGCTGCCTCCTTTTTGGTCCCTCTGACATGTCT +
Preference number: 1 (lower is better)
Translates to: LGVSDAAKFSSHSGL*PWTCCLLFGPSDMS
Trigger: AGACATGTCAGAGGGACCAAAAAGGAGGCAGCAAGTCCAAGGTCACAAACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 90 bp TCTTCATTACTTGTCTGGGGCAAACTTCACTGTAACCTGGATATATaGCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCT +
Preference number: 1 (lower is better)
Translates to: SSLLVWGKLHCNLDI*LPRLGFSKSVGGSA
Trigger: AGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATCCAGGTTACAGTGAAGTTTGCCCCAGACAAGTAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp AGTGACAGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATaGTCTTTCCCTTCTGGTCCAGAGTCCCAGTCTGGTTTAACAAGA +
Preference number: 1 (lower is better)
Translates to: SDSSFLPIQIFAIQG*SFPSGPESQSGLTR
Trigger: TCTTGTTAAACCAGACTGGGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp TGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCCAGTCTaGTTTAACAAGATCAGAATGTGTAGGGGAACGCATTCTCATACA +
Preference number: 1 (lower is better)
Translates to: CYTGMVFPFWSRVPV*FNKIRMCRGTHSHT
Trigger: TGTATGAGAATGCGTTCCCCTACACATTCTGATCTTGTTAAACCAGACTGGGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 90 bp TTTTGCCTAATGTATTCATTCACCTGCATGAACCAAGCACCCACGTaGATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCC +
Preference number: 1 (lower is better)
Translates to: FCLMYSFTCMNQAPT*MDVYYIQTVRCGPA
Trigger: GGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCAGGTGAATGAATACATTAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp GTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTaGAGAGATAATCGTTCTATAGCAAGAAGTACAAAGATTCTCTGC +
Preference number: 1 (lower is better)
Translates to: VLTLTTKRKSAWPLK*RDNRSIARSTKILC
Trigger: GCAGAGAATCTTTGTACTTCTTGCTATAGAACGATTATCTCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp TACAGAACAGTATGCATAGTGTCCTGTCCATGCCCAAAATATTTCTaGAAGAGCGCACAAGGAAATGGTGATAGTGATGGCCTCAGGGAA +
Preference number: 1 (lower is better)
Translates to: YRTVCIVSCPCPKYF*KSAQGNGDSDGLRE
Trigger: TTCCCTGAGGCCATCACTATCACCATTTCCTTGTGCGCTCTTCCAGAAATATTTTGGGCATGGACAGGACACTATGCATACTGTTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp TCACTACATTCTTTCTTTCCCTGCTCAAACTTTCCCATACCCAACTaGCTCCTCCATGTAGTTGTCAAGGCCACCATGATCTTATCTCAT +
Preference number: 1 (lower is better)
Translates to: SLHSFFPCSNFPIPN*LLHVVVKATMILSH
Trigger: ATGAGATAAGATCATGGTGGCCTTGACAACTACATGGAGGAGCCAGTTGGGTATGGGAAAGTTTGAGCAGGGAAAGAAAGAATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp TTTTTAAGTCCTCTTCCCAAGGTCTGGCCCGATGTTTGGTCTCAATaGTTGTGTAATGTCTCTGAATGGATGAAATTTACTTCCCTACGG +
Preference number: 1 (lower is better)
Translates to: FLSPLPKVWPDVWSQ*LCNVSEWMKFTSLR
Trigger: CCGTAGGGAAGTAAATTTCATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCCAGACCTTGGGAAGAGGACTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 90 bp TGCCTTTCCAGGCTCTCATGCAGTATTCCTAGACAAATCCAGAACTaGTTCCTTGCCCCTGAACCTCTACTGTACTTTTATATCAAAGTT +
Preference number: 1 (lower is better)
Translates to: CLSRLSCSIPRQIQN*FLAPEPLLYFYIKV
Trigger: AACTTTGATATAAAAGTACAGTAGAGGTTCAGGGGCAAGGAATCAGTTCTGGATTTGTCTAGGAATACTGCATGAGAGCCTGGAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 90 bp AAGTGGAGAGATAATCGTTCTATAGCAAGAAGTACAAAGATTCTCTaGAGACAAAACCAGCTAGCCAAGGTTCCACAACATGTGTACACG +
Preference number: 1 (lower is better)
Translates to: KWRDNRSIARSTKIL*RQNQLAKVPQHVYT
Trigger: CGTGTACACATGTTGTGGAACCTTGGCTAGCTGGTTTTGTCTGCAGAGAATCTTTGTACTTCTTGCTATAGAACGATTATCTCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 90 bp GGCCCGATGTTTGGTCTCAATGGTTGTGTAATGTCTCTGAATGGATaGAATTTACTTCCCTACGGAAAAGTAAAGCATTCTCCAAATGCA +
Preference number: 1 (lower is better)
Translates to: GPMFGLNGCVMSLNG*NLLPYGKVKHSPNA
Trigger: TGCATTTGGAGAATGCTTTACTTTTCCGTAGGGAAGTAAATTTCATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp AACTGTCTCCAGCACACTCAATCCATGACATTAAAGTTACAGTTTTaGTCTTTGTGTATCAGCAATGACAGGTCCTCACTCTTACCACAA +
Preference number: 1 (lower is better)
Translates to: NCLQHTQSMTLKLQF*SLCISNDRSSLLPQ
Trigger: TTGTGGTAAGAGTGAGGACCTGTCATTGCTGATACACAAAGACCAAAACTGTAACTTTAATGTCATGGATTGAGTGTGCTGGAGACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 90 bp AAATTAGCTGCCTCCTTTCTTGGCAATCCTGTTATCTACACCATATaGATCCAGTCTTTAGCTGGATATAACCATTCGTTCACTCATTCA +
Preference number: 1 (lower is better)
Translates to: KLAASFLGNPVIYTI*IQSLAGYNHSFTHS
Trigger: TGAATGAGTGAACGAATGGTTATATCCAGCTAAAGACTGGATTCATATGGTGTAGATAACAGGATTGCCAAGAAAGGAGGCAGCTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 90 bp CTACTGCTCAAAATAGTAATAAAACCACCAGCCACACATTACAAATaGGCTTTGCACTCATCTCAATTAATCCTCACAAAGCTAACTGGA +
Preference number: 1 (lower is better)
Translates to: LLLKIVIKPPATHYK*ALHSSQLILTKLTG
Trigger: TCCAGTTAGCTTTGTGAGGATTAATTGAGATGAGTGCAAAGCTCATTTGTAATGTGTGGCTGGTGGTTTTATTACTATTTTGAGCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 90 bp CAAATGAGCTTTGCACTCATCTCAATTAATCCTCACAAAGCTAACTaGAAGCCAAAAAGGCAAACATTGTCCATATTTTACAGGCTGAAA +
Preference number: 1 (lower is better)
Translates to: QMSFALISINPHKAN*KPKRQTLSIFYRLK
Trigger: TTTCAGCCTGTAAAATATGGACAATGTTTGCCTTTTTGGCTTCCAGTTAGCTTTGTGAGGATTAATTGAGATGAGTGCAAAGCTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGGCGGAGGTTGCAGTaGGCCAAGATGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPRRRLQ*AKMAPL
Trigger: CAGTGGAGCCATCTTGGCCCACTGCAACCTCCGCCT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGGGAGGCAGGTGGATaGTGGTGGAGAGCATCACCT +
Preference number: 2 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPREAGG*WWRASP
Trigger: AGGTGATGCTCTCCACCAGCATCCACCTGCCTCCCT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGTGTGAGATGTGGACCTaGCTCACAGTGTACCAGGAG +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERCEMWT*LTVYQE
Trigger: CTCCTGGTACACTGTGAGGCAGGTCCACATCTCACA...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGATTCATTCACCTGCATaGACCAAGCACCCACGTGCA +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERIHSPA*TKHPRA
Trigger: TGCACGTGGGTGCTTGGTTCATGCAGGTGAATGAAT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTGGCAGAAGAACTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSGRRTA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAGTTCTTCTGCC...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTTGAGGCCAGGAGTTTaGGACCAGGCCAGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLLRPGV*DQASLG
Trigger: GCCCAGGCTGGCCTGGTCTCAAACTCCTGGCCTCAA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTACATGTCCATCCCACTaGCTTTCCAGGCTCTCATGC +
Preference number: 2 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPTCPSH*LSRLSC
Trigger: GCATGAGAGCCTGGAAAGGCAGTGGGATGGACATGT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTATGGTCTTTCCCTTCTaGTCCAGAGTCCCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAMVFPF*SRVPVW
Trigger: CCAGACTGGGACTCTGGACCAGAAGGGAAAGACCAT...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGAGCTGCCTCCTTTCTTaGCAATCCTGTTATCTACAC +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERSCLLS*QSCYLH
Trigger: GTGTAGATAACAGGATTGCCAAGAAAGGAGGCAGCT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGGTCTGGCCCGATGTTTaGTCTCAATGGTTGTGTAAT +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERVWPDV*SQWLCN
Trigger: ATTACACAACCATTGAGACCAAACATCGGGCCAGAC...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTACTATATACAGACTGTaGGATGTGGACCTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: NIPDLSPLPLESSFLLLATIYRL*DVDLPH
Trigger: GTGAGGCAGGTCCACATCTCACAGTCTGTATATAGT...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTGAAGGCCACAGTAAATaGGGCAGGAGTACAAACAGT +
Preference number: 2 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAEGHSK*GRSTNS
Trigger: ACTGTTTGTACTCCTGCCTCATTTACTGTGGCCTTC...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGAACCAAGCACCCACGTaGATGGATGTGTACTATATA +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERNQAPT*MDVYYI
Trigger: TATATAGTACACATCCATGCACGTGGGTGCTTGGTT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGAGCATGGCTGAGAGCTaGTTTTGCCTAATGTATTCA +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERSMAES*FCLMYS
Trigger: TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGCTTTCCAGGCTCTCATaGAGTATTCCTAGACAAATC +
Preference number: 2 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERLSRLS*SIPRQI
Trigger: GATTTGTCTAGGAATACTGCATGAGAGCCTGGAAAG...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTGGGATTACAGGAGGCTaGCACCACATCCAGCTAACT +
Preference number: 2 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGGITGG*HHIQLT
Trigger: AGTTAGCTGGATGTGGTGGCAGCCTCCTGTAATCCC...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTGAGGCAGGTGGATGCTaGTGGAGAGCATCACCTAAA +
Preference number: 2 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGEAGGC*WRASPK
Trigger: TTTAGGTGATGCTCTCCACCAGCATCCACCTGCCTC...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACGTATTTAGTAAAACCTaGGGAAACGAGGAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHVFSKT*GNEEGR
Trigger: CCTGCCTTCCTCGTTTCCCCAGGTTTTACTAAATAC...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTCCAAGAATGCGGTCATaGTTCCATTCTCTCCAAAAC +
Preference number: 2 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPPRMRS*FHSLQN
Trigger: GTTTTGGAGAGAATGGAAGCATGACCGCATTCTTGG...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTTTTGCTATACAGGGATaGTCTTTCCCTTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAFAIQG*SFPSGP
Trigger: TGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAA...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACCCTCACAAAGCTAACTaGAAGCCAAAAAGGCAAACA +
Preference number: 2 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHPHKAN*KPKRQT
Trigger: TGTTTGCCTTTTTGGCTTCCAGTTAGCTTTGTGAGG...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCTTTGTGTATCAGCAATaGCAGGTCCTCACTCTTACC +
Preference number: 2 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESFVYQQ*QVLTLT
Trigger: GGTAAGAGTGAGGACCTGTCATTGCTGATACACAAA...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTATTCTCTCCAAAACGTaGTGGGGATCTGATGACAGC +
Preference number: 2 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGILSKT*WGSDDS
Trigger: GCTGTCATCAGATCCCCATCACGTTTTGGAGAGAAT...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACATAGTGTCCTGTCCATaGCCAAAATATTTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHIVSCP*PKYFWK
Trigger: CTTCCAGAAATATTTTGGGCATGGACAGGACACTAT...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCCTCAACTGCAGCCTCTaGCTCCTGGGTTCCAGCGAT +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLALNCSL*LLGSSD
Trigger: ATCGCTGGAACCCAGGAGGCAGAGGCTGCAGTTGAG...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTGCAGGTGGATGCTGGTaGAGAGCATCACCTAAATTA +
Preference number: 2 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSAGGCW*RASPKL
Trigger: TAATTTAGGTGATGCTCTCCACCAGCATCCACCTGC...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGAAGGGAGGGTGTTCCTaGCCAAAGAAACCGCATGTA +
Preference number: 2 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLKGGCS*PKKPHV
Trigger: TACATGCGGTTTCTTTGGGCAGGAACACCCTCCCTT...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCCCTGGCTCCAAATCTTaGCCCTGTAGACACCTATCC +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAPGSKS*PCRHLS
Trigger: GGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCTCAACATTCAGCCAGTaGGTAGAGTGTGAATGCCAG +
Preference number: 2 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVSTFSQ*VECECQ
Trigger: CTGGCATTCACACTCTACTCACTGGCTGAATGTTGA...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCACAGCTAAAAACCACTaGCTTGACCACATATACAAA +
Preference number: 2 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESTAKNH*LDHIYK
Trigger: TTTGTATATGTGGTCAAGCCAGTGGTTTTTAGCTGT...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCGACTTCCCAAAGTGCTaGGATTACATGAGCCACCAC +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLADFPKC*DYMSHH
Trigger: GTGGTGGCTCATGTAATCCCAGCACTTTGGGAAGTC...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCTCTCCCCACTACCCTTaGAGAGCTCATTTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLASPHYP*RAHFFS
Trigger: GGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGA...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 90 bp CTCCAGCACACTCAATCCATGACATTAAAGTTACAGTTTTGGTCTTaGTGTATCAGCAATGACAGGTCCTCACTCTTACCACAAAGCGCA +
Preference number: 2 (lower is better)
Translates to: LQHTQSMTLKLQFWS*CISNDRSSLLPQSA
Trigger: TGCGCTTTGTGGTAAGAGTGAGGACCTGTCATTGCTGATACACAAAGACCAAAACTGTAACTTTAATGTCATGGATTGAGTGTGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 90 bp TTAAGTCCTCTTCCCAAGGTCTGGCCCGATGTTTGGTCTCAATGGTaGTGTAATGTCTCTGAATGGATGAAATTTACTTCCCTACGGAAA +
Preference number: 2 (lower is better)
Translates to: LSPLPKVWPDVWSQW*CNVSEWMKFTSLRK
Trigger: TTTCCGTAGGGAAGTAAATTTCATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCCAGACCTTGGGAAGAGGACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGTTATCTACACCATATaGATCCAGTCTTTAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSVIYTI*IQSLAG
Trigger: TCCAGCTAAAGACTGGATTCATATGGTGTAGATAAC...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCGAACAGCCTAGTCTGTaGAGGCCTATGTTAACTGTC +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAEQPSL*RPMLTV
Trigger: GACAGTTAACATAGGCCTGCACAGACTAGGCTGTTC...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGATGTCTCTGAATGGATaGAATTTACTTCCCTACGGA +
Preference number: 2 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLMSLNG*NLLPYG
Trigger: TCCGTAGGGAAGTAAATTTCATCCATTCAGAGACAT...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp TGCATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCCTCACAGTGTCACATATACAAAGGCTaGAATCTCAGAGGGATATTT +
Preference number: 2 (lower is better)
Translates to: CMDVYYIQTVRCGPASQCHIYKG*NLRGIF
Trigger: AAATATCCCTCTGAGATTGCAGCCTTTGTATATGTG...ACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCAAGCACCCACGTGCATaGATGTGTACTATATACAGA +
Preference number: 2 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVKHPRA*MCTIYR
Trigger: TCTGTATATAGTACACATCCATGCACGTGGGTGCTT...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGATGTTTGGTCTCAATaGTTGTGTAATGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSDVWSQ*LCNVSE
Trigger: TTCAGAGACATTACACAACCATTGAGACCAAACATC...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTGCCCAAAATATTTCTaGAAGAGCGCACAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLCPKYF*KSAQGN
Trigger: ATTTCCTTGTGCGCTCTTCCAGAAATATTTTGGGCA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 90 bp CAATTTCTATGGACGAAGATATCAAAACTCAAAATGATCTGCTCCTaGATCCAGCATCCCATAACTCTAGCAGCCCATTTGCAACACAGT +
Preference number: 2 (lower is better)
Translates to: QFLWTKISKLKMICS*IQHPITLAAHLQHS
Trigger: ACTGTGTTGCAAATGGGCTGCTAGAGTTATGGGATGCTGGATCAAGGAGCAGATCATTTTGAGTTTTGATATCTTCGTCCATAGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGGTGATCTACCCATCTTaGCTTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKVIYPS*LPKVLG
Trigger: TCCCAGCACTTTGGGAAGTCAAGATGGGTAGATCAC...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGTTGTCAAGGCCACCATaGTCTTATCTCATCCTACCA +
Preference number: 2 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKLSRPP*SYLILP
Trigger: TGGTAGGATGAGATAAGATCATGGTGGCCTTGACAA...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR TCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCCTCTATAAAATTTGGTaGATCCAGGACCACTTAAAC +
Preference number: 2 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLALYKIW*IQDHLN
Trigger: GTTTAAGTGGTCCTGGATTCACCAAATTTTATAGAG...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGTGTAACCTGGATATATaGCTTCCTCGCCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKCNLDI*LPRLGF
Trigger: GAATCCAAGGCGAGGAAGGCATATATCCAGGTTACA...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR GCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGCCCCATCCAGATATTTaGTATACAGGGATGGTCTTT +
Preference number: 2 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKPHPDI*YTGMVF
Trigger: AAAGACCATCCCTGTATAGCAAATATCTGGATGGGG...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGGCTTGGCCTCTCAAGTaGAGAGATAATCGTTCTATA +
Preference number: 2 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKAWPLK*RDNRSI
Trigger: TATAGAACGATTATCTCTCCACTTGAGAGGCCAAGC...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCCCTGGGAGGCGGAGGTaGCAGTGGGCCAAGATGGCT +
Preference number: 3 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESPGRRR*QWAKMA
Trigger: AGCCATCTTGGCCCACTGCAACCTCCGCCTCCCAGG...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCAAAGCGCAAGTCAGCTaGGCCTCTCAAGTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESKAQVS*ASQVER
Trigger: TCTCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTT...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTTTTGTGACCTTGGACTaGCTGCCTCCTTTTTGGTCC +
Preference number: 3 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAFVTLD*LPPFWS
Trigger: GGACCAAAAAGGAGGCAGCAAGTCCAAGGTCACAAA...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 72 bp CACCCACGTGCATGGATGTGTACTATATACAGACTGTaGGATGTGGACCTGCCTCACAGTGTACCAGGAGAG +
Preference number: 3 (lower is better)
Translates to: HPRAWMCTIYRL*DVDLPHSVPGE
Trigger: CTCTCCTGGTACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTCTTGAGGCCAGCAGTTaGAGATCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSLEASS*RSAWAT
Trigger: TGTTGCCCAGGCTGATCTCAAACTGCTGGCCTCAAG...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGACTCTAGCAGCCCATTaGCAACACAGTAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERTLAAH*QHSKTK
Trigger: CTTTGTTTTACTGTGTTGCAAATGGGCTGCTAGAGT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp CTGCCCAAAGAAACCGCATGTACATGTCCATCCCACTaGCTTTCCAGGCTCTCATGCAGTATTCCTAGACAA +
Preference number: 3 (lower is better)
Translates to: LPKETACTCPSH*LSRLSCSIPRQ
Trigger: TTGTCTAGGAATACTGCATGAGAGCCTGGAAAGGCAGTGGGATGGACATGTACATGCGGTTTCTTTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp AGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATaGTCTTTCCCTTCTGGTCCAGAGTCCCAGTCTGGT +
Preference number: 3 (lower is better)
Translates to: SFLPIQIFAIQG*SFPSGPESQSG
Trigger: ACCAGACTGGGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp TCTCTCCCAGGAGAGCACCAGTTCCACGTCACCAACTaGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACT +
Preference number: 3 (lower is better)
Translates to: SLPGEHQFHVTN*VLVMLLSFLVT
Trigger: AGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGGAACTGGTGCTCTCCTGGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTAGGAAGGCAGGGAAGTaGATAAGGACTTGTAGGCAC +
Preference number: 3 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSRKAGK*IRTCRH
Trigger: GTGCCTACAAGTCCTTATCAACTTCCCTGCCTTCCT...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTTCCCCATCCAGATATTaGCTATACAGGGATGGTCTT +
Preference number: 3 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPSPSRY*LYRDGL
Trigger: AAGACCATCCCTGTATAGCAAATATCTGGATGGGGA...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp CTTGTCTGGGGCAAACTTCACTGTAACCTGGATATATaGCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGA +
Preference number: 3 (lower is better)
Translates to: LVWGKLHCNLDI*LPRLGFSKSVG
Trigger: TCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATCCAGGTTACAGTGAAGTTTGCCCCAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGGAGCACAGACAGCATTaGAAAACGGCACGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLEHRQH*KTARKV
Trigger: AACCTTCCGTGCCGTTTTCAAATGCTGTCTGTGCTC...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTGGTTCAGTAAGGGACTaGATATTATGTATTTTCCGA +
Preference number: 3 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAGSVRD*ILCIFR
Trigger: TCGGAAAATACATAATATCAAGTCCCTTACTGAACC...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp GTATGCATAGTGTCCTGTCCATGCCCAAAATATTTCTaGAAGAGCGCACAAGGAAATGGTGATAGTGATGGC +
Preference number: 3 (lower is better)
Translates to: VCIVSCPCPKYF*KSAQGNGDSDG
Trigger: GCCATCACTATCACCATTTCCTTGTGCGCTCTTCCAGAAATATTTTGGGCATGGACAGGACACTATGCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp CCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTaGTCCAGAGTCCCAGTCTGGTTTAACAAGATCAGA +
Preference number: 3 (lower is better)
Translates to: PDICYTGMVFPF*SRVPVWFNKIR
Trigger: TCTGATCTTGTTAAACCAGACTGGGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp CTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTaGAGAGATAATCGTTCTATAGCAAGAAGTACAAAG +
Preference number: 3 (lower is better)
Translates to: LTTKRKSAWPLK*RDNRSIARSTK
Trigger: CTTTGTACTTCTTGCTATAGAACGATTATCTCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp TTTTTAAGTCCTCTTCCCAAGGTCTGGCCCGATGTTTaGTCTCAATGGTTGTGTAATGTCTCTGAATGGATG +
Preference number: 3 (lower is better)
Translates to: FLSPLPKVWPDV*SQWLCNVSEWM
Trigger: CATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCCAGACCTTGGGAAGAGGACTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp CTTCATTACTTGTCTGGGGCAAACTTCACTGTAACCTaGATATATGCCTTCCTCGCCTTGGATTCAGCAAAT +
Preference number: 3 (lower is better)
Translates to: LHYLSGANFTVT*IYAFLALDSAN
Trigger: ATTTGCTGAATCCAAGGCGAGGAAGGCATATATCCAGGTTACAGTGAAGTTTGCCCCAGACAAGTAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGCTAAAAACCACTGGCTaGACCACATATACAAAGGCT +
Preference number: 3 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLLKTTG*TTYTKA
Trigger: AGCCTTTGTATATGTGGTCAAGCCAGTGGTTTTTAG...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 72 bp AGGCTCTCATGCAGTATTCCTAGACAAATCCAGAACTaGTTCCTTGCCCCTGAACCTCTACTGTACTTTTAT +
Preference number: 3 (lower is better)
Translates to: RLSCSIPRQIQN*FLAPEPLLYFY
Trigger: ATAAAAGTACAGTAGAGGTTCAGGGGCAAGGAATCAGTTCTGGATTTGTCTAGGAATACTGCATGAGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp ATGTATTCATTCACCTGCATGAACCAAGCACCCACGTaGATGGATGTGTACTATATACAGACTGTGAGATGT +
Preference number: 3 (lower is better)
Translates to: MYSFTCMNQAPT*MDVYYIQTVRC
Trigger: ACATCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCAGGTGAATGAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp AATACTGTGACAGGCACAGGGTCACATAGTAAAAACTaGCTGGAGTATCCAGATCTAGAACCCAAATCTTCA +
Preference number: 3 (lower is better)
Translates to: NTVTGTGSHSKN*LEYPDLEPKSS
Trigger: TGAAGATTTGGGTTCTAGATCTGGATACTCCAGGCAGTTTTTACTATGTGACCCTGTGCCTGTCACAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 72 bp AATAATCATTACTACTTGAATGAAGGCCACAGTAAATaGGGCAGGAGTACAAACAGTAGGCCAGGTAGACCA +
Preference number: 3 (lower is better)
Translates to: NNHYYLNEGHSK*GRSTNSRPGRP
Trigger: TGGTCTACCTGGCCTACTGTTTGTACTCCTGCCTCATTTACTGTGGCCTTCATTCAAGTAGTAATGATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp CAGCACACTCAATCCATGACATTAAAGTTACAGTTTTaGTCTTTGTGTATCAGCAATGACAGGTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: QHTQSMTLKLQF*SLCISNDRSSL
Trigger: GAGTGAGGACCTGTCATTGCTGATACACAAAGACCAAAACTGTAACTTTAATGTCATGGATTGAGTGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp AATCTCAGAGGGATATTTCATGTATTTAGTAAAACCTaGGGAAACGAGGAAGGCAGGGAAGTTGATAAGGAC +
Preference number: 3 (lower is better)
Translates to: NLRGIFHVFSKT*GNEEGREVDKD
Trigger: GTCCTTATCAACTTCCCTGCCTTCCTCGTTTCCCCAGGTTTTACTAAATACATGAAATATCCCTCTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCGTTTGGTCTCAATGGTaGTGTAATGTCTCTGAATGG +
Preference number: 3 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAVWSQW*CNVSEW
Trigger: CCATTCAGAGACATTACACAACCATTGAGACCAAAC...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 72 bp ATTAAAGTTACAGTTTTGGTCTTTGTGTATCAGCAATaGCAGGTCCTCACTCTTACCACAAAGCGCAAGTCA +
Preference number: 3 (lower is better)
Translates to: IKVTVLVFVYQQ*QVLTLTTKRKS
Trigger: TGACTTGCGCTTTGTGGTAAGAGTGAGGACCTGTCATTGCTGATACACAAAGACCAAAACTGTAACTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CCA 72 bp TATCCAGATCTAGAACCCAAATCTTCATTACTTGTCTaGGGCAAACTTCACTGTAACCTGGATATATGCCTT +
Preference number: 3 (lower is better)
Translates to: YPDLEPKSSLLV*GKLHCNLDICL
Trigger: AAGGCATATATCCAGGTTACAGTGAAGTTTGCCCCAGACAAGTAATGAAGATTTGGGTTCTAGATCTGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR-3UTR CAA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGCCAAATCTTCATTACTaGTCTGGGGCAAACTTCACT +
Preference number: 3 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKPNLHY*SGANFT
Trigger: AGTGAAGTTTGCCCCAGACAAGTAATGAAGATTTGG...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp GCTAAAAACCACTGGCTTGACCACATATACAAAGGCTaGAATCTCAGAGGGATATTTCATGTATTTAGTAAA +
Preference number: 3 (lower is better)
Translates to: AKNHWLDHIYKG*NLRGIFHVFSK
Trigger: TTTACTAAATACATGAAATATCCCTCTGAGATTGCAGCCTTTGTATATGTGGTCAAGCCAGTGGTTTTTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR GCA 72 bp AGATCAGAATGTGTAGGGGAACGCATTCTCATACATTaGTATGAGAGTATAGTTAAGCACAATTTCTATGGA +
Preference number: 3 (lower is better)
Translates to: RSECVGERILIH*YESIVKHNFYG
Trigger: TCCATAGAAATTGTGCTTAACTATACTCTCATAGCAATGTATGAGAATGCGTTCCCCTACACATTCTGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR TCA 72 bp ACAGTAAAACAAAGAACATTTTCTTCAATCGGGCACTaGTTAAATCACAGTGGATCTCTGAGACATAGTAAC +
Preference number: 3 (lower is better)
Translates to: TVKQRTFSSIGH*LNHSGSLRHSN
Trigger: GTTACTATGTCTCAGAGATCCACTGTGATTTAATCAGTGCCCGATTGAAGAAAATGTTCTTTGTTTTACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACGCCGGCTGCCTGCCATaGTCTGCGCCTGGTACCGAG +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHAGCLP*SAPGTE
Trigger: CTCGGTACCAGGCGCAGATCATGGCAGGCAGCCGGC...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGGCCGGCTGCCTGCCATaGTCTGCGCCTGGTACCGAG +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRAGCLP*SAPGTE
Trigger: CTCGGTACCAGGCGCAGATCATGGCAGGCAGCCGGC...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR TCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGTTGAGGCCAGGAGTTTaGGACCAGGCCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERLRPGV*DQASLG
Trigger: GCCCAGGCTGGCCTGGTCTCAAACTCCTGGCCTCAA...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGCGCACTCGAGGCCTTTaGAAGACGGGCTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRRTRGL*KTGSLS
Trigger: GCTGAGGGAGCCCGTCTTCCAAAGGCCTCGAGTGCG...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR GCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGTTCCAGCCGGCTGCCTaGCATGATCTGCGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRFQPAA*HDLRLV
Trigger: TACCAGGCGCAGATCATGGCAGGCAGCCGGCTGGAA...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR GCA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGACAATCTCGGCTCAACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRQSRLN*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTTGAGCCGAGATTG...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGGCAGAAGAACTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPGRRTA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAGTTCTTCTGCC...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGGAGTCCGAGAGAAGATaGTCCCTACGGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRESERR*SLRFPA
Trigger: GGCTGGAAACCGTAGGGAGCATCTTCTCTCGGACTC...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR GCA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCTTCCAGCGATTCTCCTaGCTCAGCCTCCCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESFQRFS*LSLPGS
Trigger: GCTACCCGGGAGGCTGAGGCAGGAGAATCGCTGGAA...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACTTGAGGCCAGCAGTTTaGGATCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHLRPAV*DQPGQH
Trigger: ATGTTGCCCAGGCTGATCTCAAACTGCTGGCCTCAA...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTTTCCAGCCGGCTGCCTaGCATGATCTGCGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSFQPAA*HDLRLV
Trigger: TACCAGGCGCAGATCATGGCAGGCAGCCGGCTGGAA...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTGGGAGCTTTGGCTTTaGCATATCGCACTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMWELWL*HIALEA
Trigger: GGCCTCGAGTGCGATATGGCAAAGCCAAAGCTCCCA...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGACGCACTCGAGGCCTTTaGAAGACGGGCTCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRRTRGL*KTGSLS
Trigger: GCTGAGGGAGCCCGTCTTCCAAAGGCCTCGAGTGCG...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACCCTCTTCCCAAGGTCTaGCCCGATGTTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHPLPKV*PDVWSQ
Trigger: TTGAGACCAAACATCGGGCCAGACCTTGGGAAGAGG...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTAGGCGGAGGTTGCAGTaGGCCAAGATGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGRRRLQ*AKMAPL
Trigger: CAGTGGAGCCATCTTGGCCCACTGCAACCTCCGCCT...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGGACTTCCCAAAGTGCTaGGATTACATGAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERDFPKC*DYMSHH
Trigger: GTGGTGGCTCATGTAATCCCAGCACTTTGGGAAGTC...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGATGCCTTCCTCGCCTTaGATTCAGCAAATCCGTAGG +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERMPSSP*IQQIRR
Trigger: CCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCAT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGACTATATACAGACTGTaGGATGTGGACCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERTIYRL*DVDLPH
Trigger: GTGAGGCAGGTCCACATCTCACAGTCTGTATATAGT...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTGGGATTACAGGAGGCTaGCACCACATCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAGITGG*HHIQLT
Trigger: AGTTAGCTGGATGTGGTGGCAGCCTCCTGTAATCCC...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTCCTGGCTCCAAATCTTaGCCCTGTAGACACCTATCC +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPPGSKS*PCRHLS
Trigger: GGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACCTTAAAGCATTTACCTaGCAGCCCCCAACATCCCAG +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHLKAFT*QPPTSQ
Trigger: CTGGGATGTTGGGGGCTGGCAGGTAAATGCTTTAAG...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGCTTGGATGGGAGCTTTaGCTTTGCCATATCGCACTC +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRLGWEL*LCHIAL
Trigger: GAGTGCGATATGGCAAAGCCAAAGCTCCCATCCAAG...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGATGGTCTTTCCCTTCTaGTCCAGAGTCCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMMVFPF*SRVPVW
Trigger: CCAGACTGGGACTCTGGACCAGAAGGGAAAGACCAT...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGAATTCTCTCCAAAACGTaGTGGGGATCTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRILSKT*WGSDDS
Trigger: GCTGTCATCAGATCCCCATCACGTTTTGGAGAGAAT...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACAGACAAATCCAGAACTaGTTCCTTGCCCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHRQIQN*FLAPEP
Trigger: AGGTTCAGGGGCAAGGAATCAGTTCTGGATTTGTCT...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGCACAGACAGCATTTaGAAACGGCACGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPSTDSI*KRHGRF
Trigger: GAACCTTCCGTGCCGTTTTCAAATGCTGTCTGTGCT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGCCTTTTTGGTCCCTCTaGCATGTCTCCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMPFWSL*HVSSFL
Trigger: GAGGAAAGAGGAGACATGTCAGAGGGACCAAAAAGG...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCTGTGAGATGTGGACCTaGCTCACAGTGTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESCEMWT*LTVYQE
Trigger: CTCCTGGTACACTGTGAGGCAGGTCCACATCTCACA...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCCTGGGAGGCGGAGGTTaGAGTGGGCCAAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVLGGGG*SGPRWL
Trigger: GAGCCATCTTGGCCCACTGCAACCTCCGCCTCCCAG...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCACATGTCCATCCCACTaGCTTTCCAGGCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESTCPSH*LSRLSC
Trigger: GCATGAGAGCCTGGAAAGGCAGTGGGATGGACATGT...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGGTGAATATTGGTATCTaGAGGGGCCCTAGCACCAAT +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRVNIGI*RGPSTN
Trigger: ATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGTGGTACCAGATGTCTTaGATGGGAGCTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRWYQMS*MGALAL
Trigger: CAAAGCCAAAGCTCCCATCCAAGACATCTGGTACCA...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGCTAATCCGATCCTCGTaGTACCAGATGTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRLIRSS*YQMSWM
Trigger: CATCCAAGACATCTGGTACCACGAGGATCGGATTAG...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAAGAGACCTTTCGACTaGTCTGCAGGTGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPKRPFD*SAGASK
Trigger: TTTGGAGGCACCTGCAGACCAGTCGAAAGGTCTCTT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTACAGACTGTGAGATGTaGACCTGCCTCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPTDCEM*TCLTVY
Trigger: GTACACTGTGAGGCAGGTCCACATCTCACAGTCTGT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACTTTCCCATACCCAACTaGCTCCTCCATGTAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHFPIPN*LLHVVV
Trigger: GACAACTACATGGAGGAGCCAGTTGGGTATGGGAAA...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTGGGAAGCAGCATGGCTaGGAGCTGCTTTTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSGKQHG*ELLLPN
Trigger: ATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCC...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGAAGGCAAACCTTTCTTTaGCCTGACACTGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRRQTFL*PDTAFT
Trigger: AGTGAAAGCAGTGTCAGGTCAAAGAAAGGTTTGCCT...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTACCTTTCGACTGGTCTaGAGGTGCCTCCAAATGCTG +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGTFRLV*RCLQML
Trigger: CAGCATTTGGAGGCACCTGCAGACCAGTCGAAAGGT...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGTCCCTTATCTCTGTCTaGCACTTAGATATAGCACCA +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERSLISV*HLDIAP
Trigger: TGGTGCTATATCTAAGTGGCAGACAGAGATAAGGGA...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTACCAGATGTCTTGGATaGGAGCTTTGGCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPTRCLG*ELWLCH
Trigger: ATGGCAAAGCCAAAGCTCCCATCCAAGACATCTGGT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTCTAATCCGATCCTCGTaGTACCAGATGTCTTGGATG +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPLIRSS*YQMSWM
Trigger: CATCCAAGACATCTGGTACCACGAGGATCGGATTAG...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGATTTGCTATACAGGGATaGTCTTTCCCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRFAIQG*SFPSGP
Trigger: TGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAA...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGAAACTTCACTGTAACCTaGATATATGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRNFTVT*IYAFLA
Trigger: GGCGAGGAAGGCATATATCCAGGTTACAGTGAAGTT...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGCCTCACAAAGCTAACTaGAAGCCAAAAAGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERPHKAN*KPKRQT
Trigger: TGTTTGCCTTTTTGGCTTCCAGTTAGCTTTGTGAGG...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGTTCTCCACAAACCGTTaGCAGGTAGACTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRFSTNR*QVDLKF
Trigger: AAACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAA...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR TCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTATTCATTCACCTGCATaGACCAAGCACCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSIHSPA*TKHPRA
Trigger: TGCACGTGGGTGCTTGGTTCATGCAGGTGAATGAAT...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGATGGGTGGATCACTTaGGGCCAGCAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSDGWIT*GQQFEI
Trigger: GATCTCAAACTGCTGGCCTCAAGTGATCCACCCATC...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CCTGGCTCCAAATCTTGCCCCTGTAGACACCTATCCCTTATCTCTGTCTGCCACTCTTCAATCGGGCACTaGTTAAATCACAGTGGATCT +
Preference number: 4 (lower is better)
Translates to: PGSKSCPCRHLSLISVCHSSIGH*LNHSGS
Trigger: AGATCCACTGTGATTTAATCAGTGCCCGATTGAAGA...GTGGCAGACAGAGATAAGGGATAGGTGTCTACAGGGGCAAGATTTGGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGTCAGACATATAGATaGTGGAAGACATGGGACGTG +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPSQTYR*WKTWDV
Trigger: CACGTCCCATGTCTTCCATCATCTATATGTCTGACT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCAGAACAGCCTAGTCTGTaGAGGCCTATGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSEQPSL*RPMLTV
Trigger: GACAGTTAACATAGGCCTGCACAGACTAGGCTGTTC...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTCCAAGAATGCGGTCATaGTTCCATTCTCTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAPRMRS*FHSLQN
Trigger: GTTTTGGAGAGAATGGAAGCATGACCGCATTCTTGG...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCCTCAACTGCAGCCTCTaGCTCCTGGGTTCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVLNCSL*LLGSSD
Trigger: ATCGCTGGAACCCAGGAGGCAGAGGCTGCAGTTGAG...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTCTTGGATGGGAGCTTTaGCTTTGCCATATCGCACTC +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGLGWEL*LCHIAL
Trigger: GAGTGCGATATGGCAAAGCCAAAGCTCCCATCCAAG...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGCTGCCTCCTTTCTTaGCAATCCTGTTATCTACAC +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPSCLLS*QSCYLH
Trigger: GTGTAGATAACAGGATTGCCAAGAAAGGAGGCAGCT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTGTATTTAGTAAAACCTaGGGAAACGAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAVFSKT*GNEEGR
Trigger: CCTGCCTTCCTCGTTTCCCCAGGTTTTACTAAATAC...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGAGTTTGAGATCAGCCTaGGCAACATGGTTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMSLRSA*ATWLKA
Trigger: GGCTTTTAACCATGTTGCCCAGGCTGATCTCAAACT...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGACCAGACCCATACACTaGATAAAACTTCGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: VNIGICRGPSTNPLCILRTRPIH*IKLRSN
Trigger: ATTAGAGCGAAGTTTTATTCAGTGTATGGGTCTGGT...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGAGTCACTCAGGTTTGTaGCCTTGGACTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLSHSGL*PWTCCL
Trigger: GAGGCAGCAAGTCCAAGGTCACAAACCTGAGTGACT...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCGAGTCCGAGAGAAGATaGTCCCTACGGTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVESERR*SLRFPA
Trigger: GGCTGGAAACCGTAGGGAGCATCTTCTCTCGGACTC...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTCTTTCCAGGCTCTCATaGAGTATTCCTAGACAAATC +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPLSRLS*SIPRQI
Trigger: GATTTGTCTAGGAATACTGCATGAGAGCCTGGAAAG...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGAAAGGGAGGGTGTTCCTaGCCAAAGAAACCGCATGTA +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRKGGCS*PKKPHV
Trigger: TACATGCGGTTTCTTTGGGCAGGAACACCCTCCCTT...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTTTCCACGTCACCAACTaGGTGTTAGTGATGCTGCTA +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGFHVTN*VLVMLL
Trigger: TAGCAGCATCACTAACACCCAGTTGGTGACGTGGAA...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGATCTCCCCACTACCCTTaGAGAGCTCATTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRSPHYP*RAHFFS
Trigger: GGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGA...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCAAGATCAAAAGCTCTTTaGCCAGACCCATACACTGAA +
Preference number: 4 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSRSKAL*PDPYTE
Trigger: TTCAGTGTATGGGTCTGGTCAAAGAGCTTTTGATCT...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAAATGCAAGCAGTTGTaGAACAGTGATAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPKCKQL*NSDKGR
Trigger: TCGACCTTTATCACTGTTTCACAACTGCTTGCATTT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGATGTCTCTGAATGGATaGAATTTACTTCCCTACGGA +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMMSLNG*NLLPYG
Trigger: TCCGTAGGGAAGTAAATTTCATCCATTCAGAGACAT...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGAAGGCCACAGTAAATaGGGCAGGAGTACAAACAGT +
Preference number: 4 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSEGHSK*GRSTNS
Trigger: ACTGTTTGTACTCCTGCCTCATTTACTGTGGCCTTC...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGGTGATCTACCCATCTTaGCTTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLVIYPS*LPKVLG
Trigger: TCCCAGCACTTTGGGAAGTCAAGATGGGTAGATCAC...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGCAGCTTTCTCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTCTGGTCTCAAACTCCTaGCTTCAAGTGATCTACCCA +
Preference number: 4 (lower is better)
Translates to: SSFLPIQIFAIQGWSFPSLVSNS*LQVIYP
Trigger: TGGGTAGATCACTTGAAGTCAGGAGTTTGAGACCAG...AGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGAGAAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTTTGTCAAGGCCACCATaGTCTTATCTCATCCTACCA +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGLSRPP*SYLILP
Trigger: TGGTAGGATGAGATAAGATCATGGTGGCCTTGACAA...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGACTTGACTTCCCAAAGTaGTGGGATTACATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRLDFPK*WDYMSH
Trigger: GTGGCTCATGTAATCCCAGCACTTTGGGAAGTCAAG...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCAGACGTGAATTTCTTTTaGTGGCTTTCTCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSDVNFF*WLSHSS
Trigger: GGAGGAATGAGAAAGCCAGCAAAAGAAATTCACGTC...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCAAAGCACCCACGTGCATaGATGTGTACTATATACAGA +
Preference number: 4 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSKHPRA*MCTIYR
Trigger: TCTGTATATAGTACACATCCATGCACGTGGGTGCTT...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTGCCCAAAATATTTCTaGAAGAGCGCACAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMCPKYF*KSAQGN
Trigger: ATTTCCTTGTGCGCTCTTCCAGAAATATTTTGGGCA...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCAACCAGACCCATACACTaGATAAAACTTCGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSTRPIH*IKLRSN
Trigger: ATTAGAGCGAAGTTTTATTCAGTGTATGGGTCTGGT...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCACGCAGTCTGTGGTCTaGCACTCAAGTGTTCGGATT +
Preference number: 4 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVTQSVV*HSSVRI
Trigger: AATCCGAACACTTGAGTGTCAGACCACAGACTGCGT...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TGCATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCCTCACAGTGTAAAGAAGTCAATGAGTaGCAGCAGCTTTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CMDVYYIQTVRCGPASQCKEVNE*QQLSPH
Trigger: ATGGGGAGAAAGCTGCTGTCACTCATTGACTTCTTT...ACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGCTCTATAAAATTTGGTaGATCCAGGACCACTTAAAC +
Preference number: 4 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMLYKIW*IQDHLN
Trigger: GTTTAAGTGGTCCTGGATTCACCAAATTTTATAGAG...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTCACATATACAAAGGCTaGAATCTCAGAGGGATATTT +
Preference number: 4 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAHIYKG*NLRGIF
Trigger: AAATATCCCTCTGAGATTGCAGCCTTTGTATATGTG...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTGGTACCAGATGTCTTaGATGGGAGCTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLWYQMS*MGALAL
Trigger: CAAAGCCAAAGCTCCCATCCAAGACATCTGGTACCA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTGATGTTTGGTCTCAATaGTTGTGTAATGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NIPDLSPLPLESSFLLLADVWSQ*LCNVSE
Trigger: TTCAGAGACATTACACAACCATTGAGACCAAACATC...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTTTGTGTATCAGCAATaGCAGGTCCTCACTCTTACC +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLFVYQQ*QVLTLT
Trigger: GGTAAGAGTGAGGACCTGTCATTGCTGATACACAAA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCCAGGCTGAAATACTGTaGCAGGCACAGGGTCACATA +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAQAEIL*QAQGHI
Trigger: TATGTGACCCTGTGCCTGTCACAGTATTTCAGCCTG...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAGGGAGGCAGGTGGATaGTGGTGGAGAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKREAGG*WWRASP
Trigger: AGGTGATGCTCTCCACCAGCATCCACCTGCCTCCCT...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGAAACCAAGCACCCACGTaGATGGATGTGTACTATATA +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRNQAPT*MDVYYI
Trigger: TATATAGTACACATCCATGCACGTGGGTGCTTGGTT...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGAAGCATGGCTGAGAGCTaGTTTTGCCTAATGTATTCA +
Preference number: 4 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRSMAES*FCLMYS
Trigger: TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCT...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCCTCACAGTGTACTGTGTCTTTCACCTaGTTTTTAAGTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CMDVYYIQTVRCGPASQCTVSFT*FLSPLP
Trigger: GGGAAGAGGACTTAAAAAGCAGGTGAAAGACACAGT...ACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTATAGTGTCCTGTCCATaGCCAAAATATTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGIVSCP*PKYFWK
Trigger: CTTCCAGAAATATTTTGGGCATGGACAGGACACTAT...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTTCTGATGACAGCTTTTaGCCAAACTGTGGAAATAGT +
Preference number: 4 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSSDDSF*PNCGNS
Trigger: ACTATTTCCACAGTTTGGGCAAAAGCTGTCATCAGA...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGTCGCCCAGGCTGGGGTaGTGTAGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKSPRLG*CSMISA
Trigger: AGCTGAGATCATGCTACAGCACCCCAGCCTGGGCGA...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 72 bp CTTCCCAAGGTCTGGCCCGATGTTTGGTCTCAATGGTaGTGTAATGTCTCTGAATGGATGAAATTTACTTCC +
Preference number: 4 (lower is better)
Translates to: LPKVWPDVWSQW*CNVSEWMKFTS
Trigger: GGAAGTAAATTTCATCCATTCAGAGACATTACACAACCATTGAGACCAAACATCGGGCCAGACCTTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCTCAACATTCAGCCAGTaGGTAGAGTGTGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLASTFSQ*VECECQ
Trigger: CTGGCATTCACACTCTACTCACTGGCTGAATGTTGA...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTTCAACTTAGTAGGTTaGGAATTGAAGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLFNLVG*ELKLSP
Trigger: GGGAGAGAGCTTCAATTCTCAACCTACTAAGTTGAA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp TGCATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCCTCACAGTGTGATTCCTGTTCATCTTaGTGTTTCACAAGTCACTCT +
Preference number: 4 (lower is better)
Translates to: CMDVYYIQTVRCGPASQCDSCSS*CFTSHS
Trigger: AGAGTGACTTGTGAAACAGCAAGATGAACAGGAATC...ACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 72 bp TGGACGAAGATATCAAAACTCAAAATGATCTGCTCCTaGATCCAGCATCCCATAACTCTAGCAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: WTKISKLKMICS*IQHPITLAAHL
Trigger: CAAATGGGCTGCTAGAGTTATGGGATGCTGGATCAAGGAGCAGATCATTTTGAGTTTTGATATCTTCGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGGTTATCTACACCATATaGATCCAGTCTTTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLVIYTI*IQSLAG
Trigger: TCCAGCTAAAGACTGGATTCATATGGTGTAGATAAC...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCGTGTACCAGGAGAGATaGGAGCATACACAAAGAATC +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAVYQER*EHTQRI
Trigger: GATTCTTTGTGTATGCTCTCATCTCTCCTGGTACAC...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCTCCTACCAGTTCAAATaGGCTTTTCCACTACTGCTC +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLASYQFK*AFPLLL
Trigger: GAGCAGTAGTGGAAAAGCCCATTTGAACTGGTAGGA...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCTTCTCCACAAACCGTTaGCAGGTAGACTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAFSTNR*QVDLKF
Trigger: AAACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAA...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR GCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCCCCCATCCAGATATTTaGTATACAGGGATGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAPHPDI*YTGMVF
Trigger: AAAGACCATCCCTGTATAGCAAATATCTGGATGGGG...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCGCTTGGCCTCTCAAGTaGAGAGATAATCGTTCTATA +
Preference number: 4 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAAWPLK*RDNRSI
Trigger: TATAGAACGATTATCTCTCCACTTGAGAGGCCAAGC...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGACAGCTAAAAACCACTaGCTTGACCACATATACAAA +
Preference number: 4 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLTAKNH*LDHIYK
Trigger: TTTGTATATGTGGTCAAGCCAGTGGTTTTTAGCTGT...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGGCAGGTGGATGCTGGTaGAGAGCATCACCTAAATTA +
Preference number: 4 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKAGGCW*RASPKL
Trigger: TAATTTAGGTGATGCTCTCCACCAGCATCCACCTGC...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
3UTR CAA 72 bp CATGCAGTATTCCTAGACAAATCCAGAACTGATTCCTaGCCCCTGAACCTCTACTGTACTTTTATATCAAAG +
Preference number: 4 (lower is better)
Translates to: HAVFLDKSRTDS*PLNLYCTFISK
Trigger: CTTTGATATAAAAGTACAGTAGAGGTTCAGGGGCAAGGAATCAGTTCTGGATTTGTCTAGGAATACTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR TCA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGCTGATTCCTTGCCCCTaGACCTCTACTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKLIPCP*TSTVLL
Trigger: TAAAAGTACAGTAGAGGTTCAGGGGCAAGGAATCAG...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS CCA 90 bp CAGGTCCGCTCCAAGGAAGAGCGTGACCGGCTGAGAACCCCAGCCTaGGGGAGGCACCCTCAGCCCACCACGGCTGGGAGCACACACCGA +
Preference number: 5 (lower is better)
Translates to: QVRSKEERDRLRTPA*GRHPQPTTAGSTHR
Trigger: TCGGTGTGTGCTCCCAGCCGTGGTGGGCTGAGGGTGCCTCCCCCAGGCTGGGGTTCTCAGCCGGTCACGCTCTTCCTTGGAGCGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579380.1
CDS-3UTR CAA 90 bp TGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTGAAAGGTCGCACTCGAGGCCTTaGGAAGACGGGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: CLPRLGFSKSVGGSAPERSHSRP*EDGLPQ
Trigger: CTGAGGGAGCCCGTCTTCCAAAGGCCTCGAGTGCGA...CCTTTCAGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGTCGCACTCGAGGCCTTaGGAAGACGGGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: VNIGICRGPSTNPLCILRSHSRP*EDGLPQ
Trigger: CTGAGGGAGCCCGTCTTCCAAAGGCCTCGAGTGCGA...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CAA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTCTTGAGGCCAGGAGTTaGAGACCAGGCCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPLEARS*RPGQPG
Trigger: CCCAGGCTGGCCTGGTCTCAAACTCCTGGCCTCAAG...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGATGGGAGCTTTGGCTTaGCCATATCGCACTCGAGGC +
Preference number: 5 (lower is better)
Translates to: VNIGICRGPSTNPLCILRMGALA*PYRTRG
Trigger: GCCTCGAGTGCGATATGGCAAAGCCAAAGCTCCCAT...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CAA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGGTGGTACCAGATGTCTaGGATGGGAGCTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: VNIGICRGPSTNPLCILRVVPDV*DGSFGF
Trigger: AAAGCCAAAGCTCCCATCCAAGACATCTGGTACCAC...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CAA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGCTCCGTGTTGAGTCCTaGCTTCGCCTACTCGTCTTA +
Preference number: 5 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMLRVES*LRLLVL
Trigger: TAAGACGAGTAGGCGAAGCAAGGACTCAACACGGAG...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTAAAGCGCAAGTCAGCTaGGCCTCTCAAGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: NIPDLSPLPLESSFLLLAKAQVS*ASQVER
Trigger: TCTCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTT...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp AGGTTTAAAGAGATGAGTGACCCCTCAATTGTTCCTCTGAGAATAGACTGTGTCCCTGGGAGGCGGAGGTaGCAGTGGGCCAAGATGGCT +
Preference number: 5 (lower is better)
Translates to: RFKEMSDPSIVPLRIDCVPGRRR*QWAKMA
Trigger: AGCCATCTTGGCCCACTGCAACCTCCGCCTCCCAGG...GACACAGTCTATTCTCAGAGGAACAATTGAGGGGTCACTCATCTCTTTAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp AAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGTATTCACTTGAGGCCAGCAGTTaGAGATCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KGRGGSSMAESCFCLMYSLEASS*RSAWAT
Trigger: TGTTGCCCAGGCTGATCTCAAACTGCTGGCCTCAAG...TGAATACATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGAGAGCACAGACAGCATTaGAAAACGGCACGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWREHRQH*KTARKV
Trigger: AACCTTCCGTGCCGTTTTCAAATGCTGTCTGTGCTC...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGACTCAGGTTTGTGACCTaGGACTTGCTGCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRLRFVT*DLLPPF
Trigger: AAAAGGAGGCAGCAAGTCCAAGGTCACAAACCTGAG...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp AGTGATAAAGGTCGAGGGGGAAGCAGCATGGCTGAGAGCTGCTTTTGCCTAATGGTGGTACCAGATGTCTaGGATGGGAGCTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SDKGRGGSSMAESCFCLMVVPDV*DGSFGF
Trigger: AAAGCCAAAGCTCCCATCCAAGACATCTGGTACCAC...CATTAGGCAAAAGCAGCTCTCAGCCATGCTGCTTCCCCCTCGACCTTTATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp GATATATGCCTTCCTCGCCTTGGATTCAGCAAATCCGTAGGAGGGTCTGCTCCTAGGAAGGCAGGGAAGTaGATAAGGACTTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: DICLPRLGFSKSVGGSAPRKAGK*IRTCRH
Trigger: GTGCCTACAAGTCCTTATCAACTTCCCTGCCTTCCT...AGGAGCAGACCCTCCTACGGATTTGCTGAATCCAAGGCGAGGAAGGCATATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGCTTCTCCACAAACCGTaGACAGGTAGACTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VNIGICRGPSTNPLCILRLLHKP*TGRLEV
Trigger: AACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAAG...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CAA 90 bp GTGAATATTGGTATCTGCAGGGGCCCTAGCACCAATCCCCTGTGCATACTGAGGAAATACTCACAGTCCTaGCTTCGCCTACTCGTCTTA +
Preference number: 5 (lower is better)
Translates to: VNIGICRGPSTNPLCILRKYSQS*LRLLVL
Trigger: TAAGACGAGTAGGCGAAGCAAGGACTGTGAGTATTT...CCTCAGTATGCACAGGGGATTGGTGCTAGGGCCCCTGCAGATACCAATATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578444.1
CDS-3UTR CAA 90 bp AACATCCCAGATCTCTCCCCACTACCCTTGGAGAGCTCATTTCTTCTCCTGGCTCTTCTCCACAAACCGTaGACAGGTAGACTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: NIPDLSPLPLESSFLLLALLHKP*TGRLEV
Trigger: AACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAAG...AGCCAGGAGAAGAAATGAGCTCTCCAAGGGTAGTGGGGAGAGATCTGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTTTTGTGACCTTGGACTaGCTGCCTCCTTTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGFVTLD*LPPFWS
Trigger: GGACCAAAAAGGAGGCAGCAAGTCCAAGGTCACAAA...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CAGGTCCTCACTCTTACCACAAAGCGCAAGTCAGCTTGGCCTCTCAAGTGGAGACTTCAACTTAGTAGGTaGAGAATTGAAGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: QVLTLTTKRKSAWPLKWRLQLSR*RIEALS
Trigger: GGAGAGAGCTTCAATTCTCAACCTACTAAGTTGAAG...TCTCCACTTGAGAGGCCAAGCTGACTTGCGCTTTGTGGTAAGAGTGAGGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS TCA 90 bp GTTGCTGGGCTCCAGATTCCACTTTTCAGAACTTCAGTTTCACTATaGGGAAGGGGTGCTGCCTCCCTAATTTGGCTAGATAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: VAGLQIPLFRTSVSL*GRGAASLIWLDKPS
Trigger: AGAAGGCTTATCTAGCCAAATTAGGGAGGCAGCACCCCTTCCTCATAGTGAAACTGAAGTTCTGAAAAGTGGAATCTGGAGCCCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS-3UTR CAA 90 bp TGCATGAACCAAGCACCCACGTGCATGGATGTGTACTATATACAGACTGTGAGATCCAGAACTGATTCCTaGCCCCTGAACCTCTACTGT +
Preference number: 5 (lower is better)
Translates to: CMNQAPTCMDVYYIQTVRSRTDS*PLNLYC
Trigger: ACAGTAGAGGTTCAGGGGCAAGGAATCAGTTCTGGA...TCTCACAGTCTGTATATAGTACACATCCATGCACGTGGGTGCTTGGTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS TCA 90 bp GATAAGCCTTCTCCACAGGGCAAACCCCTGACTCAATTTCATGTTTaGATTCCCAGACTGCTACCGAAACCTTCCCTTCTGAAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: DKPSPQGKPLTQFHV*IPRLLPKPSLLKFC
Trigger: ACAGAACTTCAGAAGGGAAGGTTTCGGTAGCAGTCTGGGAATTCAAACATGAAATTGAGTCAGGGGTTTGCCCTGTGGAGAAGGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS GCA 90 bp AGGCCTTTAGAGAATGAGATAATGCTTGCAAAGAGCTTAGTACAGTaGCTGGCCCAAAGCAGATGCCCAGAAACATGCGGCTATAATTGC +
Preference number: 5 (lower is better)
Translates to: RPLENEIMLAKSLVQ*LAQSRCPETCGYNC
Trigger: GCAATTATAGCCGCATGTTTCTGGGCATCTGCTTTGGGCCAGGCACTGTACTAAGCTCTTTGCAAGCATTATCTCATTCTCTAAAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS-3UTR CAA 90 bp GAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGAAGAATCAGGCTAGCCATGGGAGCTTTGGCTTaGCCATATCGCACTCGAGGC +
Preference number: 5 (lower is better)
Translates to: ENSRYKVFYKTTRRIRLAMGALA*PYRTRG
Trigger: GCCTCGAGTGCGATATGGCAAAGCCAAAGCTCCCAT...GGCTAGCCTGATTCTTCTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGTCTTGGATGGGAGCTTaGGCTTTGCCATATCGCACT +
Preference number: 5 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLSWMGA*ALPYRT
Trigger: AGTGCGATATGGCAAAGCCAAAGCTCCCATCCAAGA...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTTCCCCATCCAGATATTaGCTATACAGGGATGGTCTT +
Preference number: 5 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGSPSRY*LYRDGL
Trigger: AAGACCATCCCTGTATAGCAAATATCTGGATGGGGA...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTGGATTCCTGTTCATCTaGCTGTTTCACAAGTCACTC +
Preference number: 5 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGGFLFI*LFHKSL
Trigger: GAGTGACTTGTGAAACAGCAAGATGAACAGGAATCC...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCCCCAAATCTTCATTACTaGTCTGGGGCAAACTTCACT +
Preference number: 5 (lower is better)
Translates to: PIQIFAIQGWSFPSGPESPNLHY*SGANFT
Trigger: AGTGAAGTTTGCCCCAGACAAGTAATGAAGATTTGG...GGACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp CCACGTCACCAACTGGGTGTTAGTGATGCTGCTAAGTTTTCTAGTCACTCAGGTGGACGTGAATTTCTTTaGCTGGCTTTCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: PRHQLGVSDAAKFSSHSGGREFL*LAFSFL
Trigger: GAGGAATGAGAAAGCCAGCAAAAGAAATTCACGTCC...ACCTGAGTGACTAGAAAACTTAGCAGCATCACTAACACCCAGTTGGTGACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS GCA 90 bp ATAATGCTTGCAAAGAGCTTAGTACAGTGCCTGGCCCAAAGCAGATaGCCAGAAACATGCGGCTATAATTGCAATGATCTTTCGGTTGCT +
Preference number: 5 (lower is better)
Translates to: IMLAKSLVQCLAQSR*PETCGYNCNDLSVA
Trigger: AGCAACCGAAAGATCATTGCAATTATAGCCGCATGTTTCTGGGCATCTGCTTTGGGCCAGGCACTGTACTAAGCTCTTTGCAAGCATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS-3UTR CAA 90 bp TCCCCATCCAGATATTTGCTATACAGGGATGGTCTTTCCCTTCTGGTCCAGAGTCTAAAAACCACTGGCTaGACCACATATACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SPSRYLLYRDGLSLLVQSLKTTG*TTYTKA
Trigger: AGCCTTTGTATATGTGGTCAAGCCAGTGGTTTTTAG...ACTCTGGACCAGAAGGGAAAGACCATCCCTGTATAGCAAATATCTGGATGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp TCCATCCCATTCTTTACATCACTCCTAGGCAAACCTTTCTTTGACCTGACACTGACTCTAGCAGCCCATTaGCAACACAGTAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: SIPFFTSLLGKPFFDLTLTLAAH*QHSKTK
Trigger: CTTTGTTTTACTGTGTTGCAAATGGGCTGCTAGAGT...CAGTGTCAGGTCAAAGAAAGGTTTGCCTAGGAGTGATGTAAAGAATGGGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp TGCATGGATGTGTACTATATACAGACTGTGAGATGTGGACCTGCCTCACAGTGTGGTTCAGTAAGGGACTaGATATTATGTATTTTCCGA +
Preference number: 5 (lower is better)
Translates to: CMDVYYIQTVRCGPASQCGSVRD*ILCIFR
Trigger: TCGGAAAATACATAATATCAAGTCCCTTACTGAACC...ACACTGTGAGGCAGGTCCACATCTCACAGTCTGTATATAGTACACATCCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS-3UTR CAA 90 bp ACCACTTTCATTATCAGAGAACTCTCGATACAAAGTGTTCTACAAAACTACAAGGTTTGGTCTCAATGGTaGTGTAATGTCTCTGAATGG +
Preference number: 5 (lower is better)
Translates to: TTFIIRELSIQSVLQNYKVWSQW*CNVSEW
Trigger: CCATTCAGAGACATTACACAACCATTGAGACCAAAC...CTTGTAGTTTTGTAGAACACTTTGTATCGAGAGTTCTCTGATAATGAAAGTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313608.13
CDS CCA 72 bp TCCAAGGAAGAGCGTGACCGGCTGAGAACCCCAGCCTaGGGGAGGCACCCTCAGCCCACCACGGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SKEERDRLRTPA*GRHPQPTTAGS
Trigger: GCTCCCAGCCGTGGTGGGCTGAGGGTGCCTCCCCCAGGCTGGGGTTCTCAGCCGGTCACGCTCTTCCTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579380.1
CDS GCA 72 bp AACCAGGTCCCGAGTCCCAGCTCAGCCCCCGCACCCTaGAATACGCCTCGCCCTGCTCAGGTCCGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: NQVPSPSSAPAP*NTPRPAQVRSK
Trigger: CTTGGAGCGGACCTGAGCAGGGCGAGGCGTATTGCAGGGTGCGGGGGCTGAGCTGGGACTCGGGACCTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579380.1
CDS CAA 72 bp CAGACTGCTACCGAAACCTTCCCTTCTGAAGTTCTGTaGCCTCCTGTCCACTACAGGGCTGAGCACTCACGC +
Preference number: 6 (lower is better)
Translates to: QTATETFPSEVL*PPVHYRAEHSR
Trigger: GCGTGAGTGCTCAGCCCTGTAGTGGACAGGAGGCAACAGAACTTCAGAAGGGAAGGTTTCGGTAGCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS GCA 72 bp AGACTGCTACCGAAACCTTCCCTTCTGAAGTTCTGTTaGCTCCTGTCCACTACAGGGCTGAGCACTCACGCT +
Preference number: 6 (lower is better)
Translates to: RLLPKPSLLKFC*LLSTTGLSTHA
Trigger: AGCGTGAGTGCTCAGCCCTGTAGTGGACAGGAGGCAACAGAACTTCAGAAGGGAAGGTTTCGGTAGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS CAA 90 bp TTGAATTCCCAGACTGCTACCGAAACCTTCCCTTCTGAAGTTCTGTaGCCTCCTGTCCACTACAGGGCTGAGCACTCACGCTCTAATCCG +
Preference number: 6 (lower is better)
Translates to: LNSQTATETFPSEVL*PPVHYRAEHSRSNP
Trigger: CGGATTAGAGCGTGAGTGCTCAGCCCTGTAGTGGACAGGAGGCAACAGAACTTCAGAAGGGAAGGTTTCGGTAGCAGTCTGGGAATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS GCA 72 bp GCCCAAAGCAGATGCCCAGAAACATGCGGCTATAATTaGAATGATCTTTCGGTTGCTGGGCTCCAGATTCCA +
Preference number: 6 (lower is better)
Translates to: AQSRCPETCGYN*NDLSVAGLQIP
Trigger: TGGAATCTGGAGCCCAGCAACCGAAAGATCATTGCAATTATAGCCGCATGTTTCTGGGCATCTGCTTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS GCA 72 bp GAGAATGAGATAATGCTTGCAAAGAGCTTAGTACAGTaGCTGGCCCAAAGCAGATGCCCAGAAACATGCGGC +
Preference number: 6 (lower is better)
Translates to: ENEIMLAKSLVQ*LAQSRCPETCG
Trigger: GCCGCATGTTTCTGGGCATCTGCTTTGGGCCAGGCACTGTACTAAGCTCTTTGCAAGCATTATCTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS CAA 72 bp TTCTCCACAGGGCAAACCCCTGACTCAATTTCATGTTaGAATTCCCAGACTGCTACCGAAACCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: FSTGQTPDSISC*NSQTATETFPS
Trigger: AGAAGGGAAGGTTTCGGTAGCAGTCTGGGAATTCAAACATGAAATTGAGTCAGGGGTTTGCCCTGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS CAA 90 bp GCAGATGCCCAGAAACATGCGGCTATAATTGCAATGATCTTTCGGTaGCTGGGCTCCAGATTCCACTTTTCAGAACTTCAGTTTCACTAT +
Preference number: 6 (lower is better)
Translates to: ADAQKHAAIIAMIFR*LGSRFHFSELQFHY
Trigger: ATAGTGAAACTGAAGTTCTGAAAAGTGGAATCTGGAGCCCAGCAACCGAAAGATCATTGCAATTATAGCCGCATGTTTCTGGGCATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579768.1
CDS CAA 72 bp CAGAAACATGCGGCTATAATTGCAATGATCTTTCGGTaGCTGGGCTCCAGATTCCACTTTTCAGAACTTCAG +
Preference number: 6 (lower is better)
Translates to: QKHAAIIAMIFR*LGSRFHFSELQ
Trigger: CTGAAGTTCTGAAAAGTGGAATCTGGAGCCCAGCAACCGAAAGATCATTGCAATTATAGCCGCATGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579768.1