RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122140

Ensembl transcript IDs: ENST00000241600.10, ENST00000371785.5, ENST00000453385.1, ENST00000462948.5, ENST00000472852.1, ENST00000472946.1, ENST00000485333.5, ENST00000488610.5

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCATACCAGCCACTGAGGTCCTAACTGCAGCCAAGGGGCCGTTCTaGACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAA +
Preference number: 1 (lower is better)
Translates to: AIPATEVLTAAKGPF*TCRSPSVLCSPQSK
Trigger: TTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTCAGTGGCTGGTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTaGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTG +
Preference number: 1 (lower is better)
Translates to: PSVLCSPQSKRTWQR*SAQPLVLWWNGGCL
Trigger: CAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 90 bp TGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATaGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGT +
Preference number: 1 (lower is better)
Translates to: CRSPSVLCSPQSKRT*QRWSAQPLVLWWNG
Trigger: ACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 90 bp CCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCT +
Preference number: 1 (lower is better)
Translates to: PHRANAHGNVGPLSH*FCGGTVDVCTVTSA
Trigger: AGCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR TCA 90 bp GAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTTAGATTaGGAAGAAAAACTGCACCTTCCTGACAAAGGTCAGGGGTCACGG +
Preference number: 1 (lower is better)
Translates to: EPGSQGSGPPERHLD*EEKLHLPDKGQGSR
Trigger: CCGTGACCCCTGACCTTTGTCAGGAAGGTGCAGTTTTTCTTCTCAATCTAAATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp CTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTG +
Preference number: 2 (lower is better)
Translates to: LQPRGRSAHVAHPLCSVPGPLSH*FCGGTV
Trigger: CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACC...GGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGCCACTGGTTCTGTaGTGGAACGGTGGATGTCTG +
Preference number: 2 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPQPLVL*WNGGCL
Trigger: CAGACATCCACCGTTCCACCACAGAACCAGTGGCTG...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp CTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCAGAGCAAACGCACATaGCAACGTTGGTCCGCTCAG +
Preference number: 2 (lower is better)
Translates to: LQPRGRSAHVAHPLCSVPQSKRT*QRWSAQ
Trigger: CTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTG...GGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCAAGACAGGCTTGGCTGTaGTTTGCTTTGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPRQAWL*FALGGE
Trigger: CTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCT...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACACCACTGGTTCTGTGGTaGAACGGTGGATGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTPLVLW*NGGCLH
Trigger: GTGCAGACATCCACCGTTCCACCACAGAACCAGTGG...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CAA 90 bp ACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTaGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCT +
Preference number: 2 (lower is better)
Translates to: TLCALFPTEQTHMAT*VRSATGSVVERWMS
Trigger: AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGGCTTGGCTGTGGTTTaGTTTGGGAGGAGAGTGAAC +
Preference number: 2 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTGLAVV*FGRRVN
Trigger: GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCC...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGGAACGGTGGATGTCTaGACTGTGACATCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTGTVDV*TVTSAE
Trigger: CTCAGCTGATGTCACAGTGCAGACATCCACCGTTCC...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGTCGCTCACCCTCTGTaGTCTGTTCCCCACAGAGCA +
Preference number: 2 (lower is better)
Translates to: ASEWPASSISLQNSPLEPVAHPL*SVPHRA
Trigger: TGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGAC...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTG +
Preference number: 2 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEGPLSH*FCGGTV
Trigger: CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCGCACATGGCAACGTTaGTCCGCTCAGCCACTGGTT +
Preference number: 2 (lower is better)
Translates to: AASHYKTAPWNQVAKEAARTWQR*SAQPLV
Trigger: AACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCG...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR TCA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCAGGCCATACCAGCCACTaGGGTCCTAACTGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPGHTSH*GPNCSQ
Trigger: TTGGCTGCAGTTAGGACCTCAGTGGCTGGTATGGCC...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTAGACAGGCTTGGCTGTaGTTTGCTTTGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSARQAWL*FALGGE
Trigger: CTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCT...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR TCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTAAAACTGCACCTTCCTaGCAAAGGTCAGGGGTCACG +
Preference number: 2 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIKTAPS*QRSGVT
Trigger: CGTGACCCCTGACCTTTGTCAGGAAGGTGCAGTTTT...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCGGCTTGGCTGTGGTTTaGTTTGGGAGGAGAGTGAAC +
Preference number: 2 (lower is better)
Translates to: TQLGASEWPASSISLQNSGLAVV*FGRRVN
Trigger: GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCC...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCGGAACGGTGGATGTCTaGACTGTGACATCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: LTLCALFPTEQTHMATLVGTVDV*TVTSAE
Trigger: CTCAGCTGATGTCACAGTGCAGACATCCACCGTTCC...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp GCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCCCACTGGTTCTGTGGTaGAACGGTGGATGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: ASSISLQNSPLEPGSQGSPLVLW*NGGCLH
Trigger: GTGCAGACATCCACCGTTCCACCACAGAACCAGTGG...GCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCATCTTCTAGCAGCTTaGCCATACCAGCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: TQLGASEWPASSISLQNSHLLAA*PYQPLR
Trigger: CCTCAGTGGCTGGTATGGCCAAGCTGCTAGAAGATG...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR GCA 90 bp CATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAATTGAGAAGAAAAACTaGACCTTCCTGACAAAGGTC +
Preference number: 2 (lower is better)
Translates to: HYKTAPWNQVAKEAAHLKIEKKN*TFLTKV
Trigger: GACCTTTGTCAGGAAGGTGCAGTTTTTCTTCTCAAT...TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR TCA 90 bp GCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGAAAGGCATTTAGATTaGGAAGAAAAACTGCACCTT +
Preference number: 2 (lower is better)
Translates to: ASSISLQNSPLEPGSQGSERHLD*EEKLHL
Trigger: AAGGTGCAGTTTTTCTTCTCAATCTAAATGCCTTTC...GCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CAA 90 bp CTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCCAGCTCAGACAGGCTaGGCTGTGGTTTGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: LQPRGRSAHVAHPLCSVPPAQTG*AVVCFG
Trigger: CCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGG...GGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR GCA 72 bp GCCACTGAGGTCCTAACTGCAGCCAAGGGGCCGTTCTaGACATGTCGCTCACCCTCTGTGCTCTGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: ATEVLTAAKGPF*TCRSPSVLCSP
Trigger: TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR GCA 72 bp CCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTaGTCTGTTCCCCACAGAGCAAACGCACATGGCAAC +
Preference number: 3 (lower is better)
Translates to: PRGRSAHVAHPL*SVPHRANAHGN
Trigger: GTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 72 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATaGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGG +
Preference number: 3 (lower is better)
Translates to: PSVLCSPQSKRT*QRWSAQPLVLW
Trigger: CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR-3UTR CAA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCACCAGCTCAGACAGGCTaGGCTGTGGTTTGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: ASEWPASSISLQNSPLEPPAQTG*AVVCFG
Trigger: CCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGG...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 72 bp GCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTG +
Preference number: 3 (lower is better)
Translates to: ANAHGNVGPLSH*FCGGTVDVCTV
Trigger: CACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 72 bp CTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTaGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGT +
Preference number: 3 (lower is better)
Translates to: LCSPQSKRTWQR*SAQPLVLWWNG
Trigger: ACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 72 bp GGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTaGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAA +
Preference number: 3 (lower is better)
Translates to: GLPAASHYKTAP*NQVAKEAAHLK
Trigger: TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CCA 72 bp ACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTaGTGGAACGGTGGATGTCTGCACTGTGACATCAGC +
Preference number: 3 (lower is better)
Translates to: TWQRWSAQPLVL*WNGGCLHCDIS
Trigger: GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCAGGGTGGGCTGGCCCCTaGTCCCCGGGCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPGWAGP*SPGSFW
Trigger: CCAGAAGGAGCCCGGGGACCAGGGGCCAGCCCACCC...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACCGAGGATGTCGCCATaGCTGGGACGCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPPRMSP*LGRGAE
Trigger: CTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGG...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGCCGGCAGGCGGACCGTaGGGCCAAAGAGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: PQSKRTWQRWSAQPLVLWPAGGP*GQRGGA
Trigger: CGCGCCTCCTCTTTGGCCCCACGGTCCGCCTGCCGG...CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACCCGGCAGGCGGACCGTaGGGCCAAAGAGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNPAGGP*GQRGGA
Trigger: CGCGCCTCCTCTTTGGCCCCACGGTCCGCCTGCCGG...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGGGTGGGCTGGCCCCTaGTCCCCGGGCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSGWAGP*SPGSFW
Trigger: CCAGAAGGAGCCCGGGGACCAGGGGCCAGCCCACCC...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTTCCAAGCGTCCTaGGGCTCGGCCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVRFQAS*GSAEQA
Trigger: GGCCTGCTCGGCCGAGCCGCAGGACGCTTGGAAGCG...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTCTGTCCCCAGGCGGCTaGGACCTCCGACGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGILSPGG*DLRRSQ
Trigger: CTGGGACCGTCGGAGGTCCCAGCCGCCTGGGGACAG...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS-3UTR TCA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGTCTCCTTGGCCCGGGTaGTGGCCGTCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVSPWPG*WPSGRA
Trigger: GGCTCTTCCAGACGGCCATCACCCGGGCCAAGGAGA...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp CCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGGGTCAGGGGTCACGGTaGAGGGAGGGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PQSKRTWQRWSAQPLVLWGQGSR*REGCWD
Trigger: ATCCCAGCAGCCCTCCCTTCACCGTGACCCCTGACC...CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAACGCTTCCAAGCGTCCTaGGGCTCGGCCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HYKTAPWNQVAKEAAHLKRFQAS*GSAEQA
Trigger: GGCCTGCTCGGCCGAGCCGCAGGACGCTTGGAAGCG...TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAGGATGTCGCCATGGCTaGGACGCGGGGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: RANAHGNVGPLSHWFCGGGCRHG*DAGQSE
Trigger: CTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCC...TCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCGGATGTCGCCATGGCTaGGACGCGGGGCAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAAGCRHG*DAGQSE
Trigger: CTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCC...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTCCGAGGATGTCGCCATaGCTGGGACGCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSPRMSP*LGRGAE
Trigger: CTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGG...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGACCTTCCCGGCCCTTaGGGAGTCGCCCGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ASEWPASSISLQNSPLEPDLPGP*GVARQV
Trigger: AACCTGCCGGGCGACTCCCCAAGGGCCGGGAAGGTC...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS-3UTR TCA 90 bp CCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTCAGCATGCCGCCCCTaGAGTAGCGAGTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: PQSKRTWQRWSAQPLVLWSACRP*SSECGR
Trigger: ACGCCCACACTCGCTACTTCAGGGGCGGCATGCTGA...CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACTCTCCTTGGCCCGGGTaGTGGCCGTCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNSPWPG*WPSGRA
Trigger: GGCTCTTCCAGACGGCCATCACCCGGGCCAAGGAGA...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTCCAGCTGGGAGCCTCTaGGTGGCCTGCCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSPAGSL*VACQQH
Trigger: ATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGG...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp ATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGCCAGCTGGGAGCCTCTaGGTGGCCTGCCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MSLTLCALFPTEQTHMATPAGSL*VACQQH
Trigger: ATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGG...CGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGGTCAGGGGTCACGGTaGAGGGAGGGCTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEGQGSR*REGCWD
Trigger: ATCCCAGCAGCCCTCCCTTCACCGTGACCCCTGACC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCAGATGTTCATCTTGGCTaGGTCTCTCACGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPDVHLG*VSHGHV
Trigger: CACGTGGCCGTGAGAGACGCAGCCAAGATGAACATC...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp AGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAAGAGCCTCAACCTGCTaGCGCTTCTCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RANAHGNVGPLSHWFCGGRASTC*RFSLAR
Trigger: CCGGGCCAAGGAGAAGCGGCAGCAGGTTGAGGCTCT...TCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCAGAGCCTCAACCTGCTaGCGCTTCTCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISRASTC*RFSLAR
Trigger: CCGGGCCAAGGAGAAGCGGCAGCAGGTTGAGGCTCT...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GAGGTCCTAACTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: EVLTAAKGPFCTCRSPSVRSMMS*SRRLPK
Trigger: CTTTGGGAGCCGCCTGGACCACGACATCATCGACCT...CACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGGCAGGGGTTGCAGTTaGTGTCCACGATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVGRGCS*CPRCPL
Trigger: CAGTGGGCATCGTGGACACCAACTGCAACCCCTGCC...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
3UTR CAA 72 bp GCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTaGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGG +
Preference number: 4 (lower is better)
Translates to: ALFPTEQTHMAT*VRSATGSVVER
Trigger: CCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCATCTGTTCCAGGTCGATaGTGTCGTGGTCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASEWPASSISLQNSPLEPSVPGR*CRGPGG
Trigger: GCCGCCTGGACCACGACATCATCGACCTGGAACAGA...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCTCTGTTCCAGGTCGATaGTGTCGTGGTCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISSVPGR*CRGPGG
Trigger: GCCGCCTGGACCACGACATCATCGACCTGGAACAGA...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCAGGCCATGTGGGCGGTaGAGTTCAAGGCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVRPCGR*SSRPAG
Trigger: TCCAGCTGGCCTTGAACTTCACCGCCCACATGGCCT...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp CATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAATCAGCATGCCGCCCCTaGAGTAGCGAGTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: HYKTAPWNQVAKEAAHLKSACRP*SSECGR
Trigger: ACGCCCACACTCGCTACTTCAGGGGCGGCATGCTGA...TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp CAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGGGCCATACCAGCCACTaGGGTCCTAACTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QTHMATLVRSATGSVVERGHTSH*GPNCSQ
Trigger: TTGGCTGCAGTTAGGACCTCAGTGGCTGGTATGGCC...CCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCAAGGCCAGCTGGAGGTaGGTGGCTGTCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVKASWR*VAVCSR
Trigger: CCTGGAACAGACAGCCACGCACCTCCAGCTGGCCTT...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTGTCGCTCACCCTCTGTaGTCTGTTCCCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSAVAHPL*SVPHRA
Trigger: TGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGAC...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTGCCAAGGGGCCGTTCTaGACATGTCGCTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: AHPLCSVPHRANAHGNVGAKGPF*TCRSPS
Trigger: AGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGC...ACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTGCCAAGGGGCCGTTCTaGACATGTCGCTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIAKGPF*TCRSPS
Trigger: AGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGC...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GAGGTCCTAACTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EVLTAAKGPFCTCRSPSVALCPR*TRASKR
Trigger: CCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGC...CACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACCCAGCTGGAGGTGCGTaGCTGTCTGTTCCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNPAGGA*LSVPGR
Trigger: TCGACCTGGAACAGACAGCCACGCACCTCCAGCTGG...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GAGGTCCTAACTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCCACGATGCCCACTGTaGGGATGTTCATCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EVLTAAKGPFCTCRSPSVPRCPL*GCSSWL
Trigger: CAGCCAAGATGAACATCCCCACAGTGGGCATCGTGG...CACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCGGCAGGGGTTGCAGTTaGTGTCCACGATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVGRGCS*CPRCPL
Trigger: CAGTGGGCATCGTGGACACCAACTGCAACCCCTGCC...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: ASEWPASSISLQNSPLEPGPLSH*FCGGTV
Trigger: CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACC...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCGGTCCGCTCAGCCACTaGTTCTGTGGTGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVGPLSH*FCGGTV
Trigger: CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACC...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCTCAGGTCATCTGGCCTaGCTGTCCCACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVSGHLA*LSHQPS
Trigger: GCTGGGTTGGTGGGACAGCCAGGCCAGATGACCTGA...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCTCAGGTCATCTGGCCTaGCTGTCCCACCAACCCAGC +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAASGHLA*LSHQPS
Trigger: GCTGGGTTGGTGGGACAGCCAGGCCAGATGACCTGA...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACATGGAATCAGGTCATCTaGCCTGGCTGTCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTWNQVI*PGCPTN
Trigger: GTTGGTGGGACAGCCAGGCCAGATGACCTGATTCCA...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACGGCCATACCAGCCACTaGGGTCCTAACTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNGHTSH*GPNCSQ
Trigger: TTGGCTGCAGTTAGGACCTCAGTGGCTGGTATGGCC...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCAAAGGCCAGCTGGAGGTaGGTGGCTGTCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPKASWR*VAVCSR
Trigger: CCTGGAACAGACAGCCACGCACCTCCAGCTGGCCTT...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGGATGTTCATCTTGGCTaGGTCTCTCACGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: QTHMATLVRSATGSVVERDVHLG*VSHGHV
Trigger: CACGTGGCCGTGAGAGACGCAGCCAAGATGAACATC...CCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GAGGTCCTAACTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGAGTTGGTGTCCACGATaGCCACTGTGGGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: EVLTAAKGPFCTCRSPSVSWCPR*PLWGCS
Trigger: TGAACATCCCCACAGTGGGCATCGTGGACACCAACT...CACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAGTTAGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGTCTGGAAGAGCCTaGAGTAGAGGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AHPLCSVPHRANAHGNVGPSGRA*SRGAQP
Trigger: TGGCTGTGCACCTCTACTGCAGGCTCTTCCAGACGG...ACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTGTCGCTCACCCTCTGTaGTCTGTTCCCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: AHPLCSVPHRANAHGNVGVAHPL*SVPHRA
Trigger: TGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGAC...ACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TQLGASEWPASSISLQNSRSMMS*SRRLPK
Trigger: CTTTGGGAGCCGCCTGGACCACGACATCATCGACCT...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCAGCTGGAGGTGCGTaGCTGTCTGTTCCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPPAGGA*LSVPGR
Trigger: TCGACCTGGAACAGACAGCCACGCACCTCCAGCTGG...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGGGATGTTCATCTTaGCTGCGTCTCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PQSKRTWQRWSAQPLVLWWGCSS*LRLSRP
Trigger: TGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCA...CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTCGCACATGGCAACGTTaGTCCGCTCAGCCACTGGTT +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSRTWQR*SAQPLV
Trigger: AACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCG...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACACATCTTCTAGCAGCTTaGCCATACCAGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTHLLAA*PYQPLR
Trigger: CCTCAGTGGCTGGTATGGCCAAGCTGCTAGAAGATG...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGAAAACTGCACCTTCCTaGCAAAGGTCAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVKTAPS*QRSGVT
Trigger: CGTGACCCCTGACCTTTGTCAGGAAGGTGCAGTTTT...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAACCGTCTGGAAGAGCCTaGAGTAGAGGTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEPSGRA*SRGAQP
Trigger: TGGCTGTGCACCTCTACTGCAGGCTCTTCCAGACGG...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTGGAACGGTGGATGTCTaGACTGTGACATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSAGTVDV*TVTSAE
Trigger: CTCAGCTGATGTCACAGTGCAGACATCCACCGTTCC...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCAAGTTCAAGGCCAGCTaGAGGTGCGTGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISKFKAS*RCVAVC
Trigger: ACAGACAGCCACGCACCTCCAGCTGGCCTTGAACTT...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACAAGTTCAAGGCCAGCTaGAGGTGCGTGGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNKFKAS*RCVAVC
Trigger: ACAGACAGCCACGCACCTCCAGCTGGCCTTGAACTT...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACTGGGGATGTTCATCTTaGCTGCGTCTCTCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNWGCSS*LRLSRP
Trigger: TGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCA...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCCACGATGCCCACTGTaGGGATGTTCATCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVPRCPL*GCSSWL
Trigger: CAGCCAAGATGAACATCCCCACAGTGGGCATCGTGG...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGAGACAGGCTTGGCTGTaGTTTGCTTTGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PQSKRTWQRWSAQPLVLWRQAWL*FALGGE
Trigger: CTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCT...CCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACCCACTGGTTCTGTGGTaGAACGGTGGATGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNPLVLW*NGGCLH
Trigger: GTGCAGACATCCACCGTTCCACCACAGAACCAGTGG...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCAGCCACTGGTTCTGTaGTGGAACGGTGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVQPLVL*WNGGCL
Trigger: CAGACATCCACCGTTCCACCACAGAACCAGTGGCTG...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCAGCCACTGGTTCTGTaGTGGAACGGTGGATGTCTG +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAAQPLVL*WNGGCL
Trigger: CAGACATCCACCGTTCCACCACAGAACCAGTGGCTG...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACCAGAGCAAACGCACATaGCAACGTTGGTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNQSKRT*QRWSAQ
Trigger: CTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTG...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCCAGAGCAAACGCACATaGCAACGTTGGTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISQSKRT*QRWSAQ
Trigger: CTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCTG...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCTGGAATCAGGTCATCTaGCCTGGCTGTCCCACCAAC +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISWNQVI*PGCPTN
Trigger: GTTGGTGGGACAGCCAGGCCAGATGACCTGATTCCA...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCAAAACTGCACCTTCCTaGCAAAGGTCAGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISKTAPS*QRSGVT
Trigger: CGTGACCCCTGACCTTTGTCAGGAAGGTGCAGTTTT...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGGCTCCATAAACCTGTaGCGACAGCCAGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSGSINL*RQPALC
Trigger: ACACAAAGCTGGCTGTCGGCACAGGTTTATGGAGCC...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTAGTTGGTGTCCACGATaGCCACTGTGGGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: AHPLCSVPHRANAHGNVGSWCPR*PLWGCS
Trigger: TGAACATCCCCACAGTGGGCATCGTGGACACCAACT...ACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTGGCTTGGCTGTGGTTTaGTTTGGGAGGAGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIGLAVV*FGRRVN
Trigger: GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCC...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTGGCTTGGCTGTGGTTTaGTTTGGGAGGAGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: AHPLCSVPHRANAHGNVGGLAVV*FGRRVN
Trigger: GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCC...ACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCGAACATCACAGGGAATaGCTCATGTCAGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAAEHHRE*LMSAPG
Trigger: TCCTGGGGCTGACATGAGCCATTCCCTGTGATGTTC...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp CAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGGGCTGTGGTTTGCTTTaGGAGGAGAGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: QTHMATLVRSATGSVVERGCGLL*EESEHH
Trigger: GTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCC...CCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTAGACAGGCTTGGCTGTaGTTTGCTTTGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIRQAWL*FALGGE
Trigger: CTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCT...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGCATCTTCTAGCAGCTTaGCCATACCAGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: MSLTLCALFPTEQTHMATHLLAA*PYQPLR
Trigger: CCTCAGTGGCTGGTATGGCCAAGCTGCTAGAAGATG...CGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAGCGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGTACAAAACAGCCCCCTaGAACCAGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVYKTAP*NQVAKE
Trigger: TTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTA...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTAGGAAGCGGCCCACCTaGAAGGCATTTAGATTGAGA +
Preference number: 4 (lower is better)
Translates to: MATLVRSATGSVVERWMSRKRPT*KAFRLR
Trigger: TCTCAATCTAAATGCCTTTCAGGTGGGCCGCTTCCT...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGGAACGGTGGATGTCTaGACTGTGACATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEGTVDV*TVTSAE
Trigger: CTCAGCTGATGTCACAGTGCAGACATCCACCGTTCC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCTCTCACGGCCACGTGTaGCTCAAAGATGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TQLGASEWPASSISLQNSSHGHV*LKDVVE
Trigger: CTCAACAACATCTTTGAGCCACACGTGGCCGTGAGA...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCTCTCACGGCCACGTGTaGCTCAAAGATGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAASHGHV*LKDVVE
Trigger: CTCAACAACATCTTTGAGCCACACGTGGCCGTGAGA...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGAACATCACAGGGAATaGCTCATGTCAGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEEHHRE*LMSAPG
Trigger: TCCTGGGGCTGACATGAGCCATTCCCTGTGATGTTC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTGGCTGTGGTTTGCTTTaGGAGGAGAGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIGCGLL*EESEHH
Trigger: GTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCC...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCTACAAAACAGCCCCCTaGAACCAGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAAYKTAP*NQVAKE
Trigger: TTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTA...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCAAGGAAGCGGCCCACCTaGAAGGCATTTAGATTGAGA +
Preference number: 4 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPRKRPT*KAFRLR
Trigger: TCTCAATCTAAATGCCTTTCAGGTGGGCCGCTTCCT...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTGCACTGTGACATCAGCATCAGGTACGAGAACTaGCGGTTGCGGCTTATAAAC +
Preference number: 4 (lower is better)
Translates to: AQPLVLWWNGGCLHCDISIRYEN*RLRLIN
Trigger: GTTTATAAGCCGCAACCGGCAGTTCTCGTACCTGAT...GCTGATGTCACAGTGCAGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCATCAGGTACGAGAACTaGCGGTTGCGGCTTATAAAC +
Preference number: 4 (lower is better)
Translates to: TQLGASEWPASSISLQNSIRYEN*RLRLIN
Trigger: GTTTATAAGCCGCAACCGGCAGTTCTCGTACCTGAT...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCATGTTGTTGAGCGTGTaGAGGAAGATGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TQLGASEWPASSISLQNSMLLSV*RKMMRS
Trigger: GGACCTCATCATCTTCCTGCACACGCTCAACAACAT...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAATGTTGTTGAGCGTGTaGAGGAAGATGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HYKTAPWNQVAKEAAHLKMLLSV*RKMMRS
Trigger: GGACCTCATCATCTTCCTGCACACGCTCAACAACAT...TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCTTGAAGAAGTCAGAGTaGTTGAGGGGCTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: AASHYKTAPWNQVAKEAALKKSE*LRGSFK
Trigger: TTTGAATGAGCCCCTCAAGCACTCTGACTTCTTCAA...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTGAAAGGCATTTAGATTaGGAAGAAAAACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSAERHLD*EEKLHL
Trigger: AAGGTGCAGTTTTTCTTCTCAATCTAAATGCCTTTC...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR TCA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGAAAGGCATTTAGATTaGGAAGAAAAACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVERHLD*EEKLHL
Trigger: AAGGTGCAGTTTTTCTTCTCAATCTAAATGCCTTTC...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAATTGAAGAAGTCAGAGTaGTTGAGGGGCTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPELKKSE*LRGSFK
Trigger: TTTGAATGAGCCCCTCAAGCACTCTGACTTCTTCAA...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCATTGAGAAGAAAAACTaGACCTTCCTGACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LTLCALFPTEQTHMATLVIEKKN*TFLTKV
Trigger: GACCTTTGTCAGGAAGGTGCAGTTTTTCTTCTCAAT...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR GCA 90 bp GCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCATTGAGAAGAAAAACTaGACCTTCCTGACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASSISLQNSPLEPGSQGSIEKKN*TFLTKV
Trigger: GACCTTTGTCAGGAAGGTGCAGTTTTTCTTCTCAAT...GCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS GCA 90 bp CACGGGAGTGGGAGGAGCCCAGCGGAGCGCGCAGTTTCGACCGCGTaGAGCGCCCAGGCCCCTCTAGGGTTCGCATCCCCCGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HGSGRSPAERAVSTA*SAQAPLGFASPAAA
Trigger: GGCAGCCGCGGGGGATGCGAACCCTAGAGGGGCCTGGGCGCTGCACGCGGTCGAAACTGCGCGCTCCGCTGGGCTCCTCCCACTCCCGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462948.5
CDS CCA 90 bp CGCGCCGAGTATTCGGGGCAGCGCGGCCGAGGATGTCGCCATGGCTaGGACGCGGGGCAGAGCGAGGTCTCCCTCCAGGCCAGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: RAEYSGQRGRGCRHG*DAGQSEVSLQARPS
Trigger: GCTCGGCCTGGCCTGGAGGGAGACCTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGGCCGCGCTGCCCCGAATACTCGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS CCA 90 bp CACCCGCGCCGAGTATTCGGGGCAGCGCGGCCGAGGATGTCGCCATaGCTGGGACGCGGGGCAGAGCGAGGTCTCCCTCCAGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: HPRRVFGAARPRMSP*LGRGAERGLPPGQA
Trigger: GGCCTGGCCTGGAGGGAGACCTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGGCCGCGCTGCCCCGAATACTCGGCGCGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS CCA 90 bp CGCCTTCCCGAGAAAGCCCAACCAGCGCGACGGGGCCCGGGCACCTaGGGGGAAGTAGATAGAGGTCCTGGCGCCGAGTCCCGAATGCAC +
Preference number: 5 (lower is better)
Translates to: RLPEKAQPARRGPGT*GEVDRGPGAESRMH
Trigger: GTGCATTCGGGACTCGGCGCCAGGACCTCTATCTACTTCCCCCCAGGTGCCCGGGCCCCGTCGCGCTGGTTGGGCTTTCTCGGGAAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453385.1
CDS TCA 90 bp CCGTGGGGCCAAAGAGGAGGCGCGCGTTGGTCAGCATGCCGCCCCTaGAGTAGCGAGTGTGGGCGTACTCGCCACAGTCACGGGCCATGT +
Preference number: 5 (lower is better)
Translates to: PWGQRGGARWSACRP*SSECGRTRHSHGPC
Trigger: ACATGGCCCGTGACTGTGGCGAGTACGCCCACACTCGCTACTTCAGGGGCGGCATGCTGACCAACGCGCGCCTCCTCTTTGGCCCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS TCA 90 bp GGCGATAGAGAGCCTCAACCTGCTGCCGCTTCTCCTTGGCCCGGGTaGTGGCCGTCTGGAAGAGCCTGCAGTAGAGGTGCACAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GDREPQPAAASPWPG*WPSGRACSRGAQPA
Trigger: CGCTGGCTGTGCACCTCTACTGCAGGCTCTTCCAGACGGCCATCACCCGGGCCAAGGAGAAGCGGCAGCAGGTTGAGGCTCTCTATCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACGACCTTCCCGGCCCTaGGGGAGTCGCCCGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPRPSRP*GSRPAG
Trigger: ACCTGCCGGGCGACTCCCCAAGGGCCGGGAAGGTCG...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS-3UTR CAA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTTGCTGCCGCTTCTCCTaGGCCCGGGTGATGGCCGTC +
Preference number: 5 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGICCRFS*ARVMAV
Trigger: GACGGCCATCACCCGGGCCAAGGAGAAGCGGCAGCA...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTTGCTGCCGCTTCTCCTaGGCCCGGGTGATGGCCGTC +
Preference number: 5 (lower is better)
Translates to: MATLVRSATGSVVERWMSCCRFS*ARVMAV
Trigger: GACGGCCATCACCCGGGCCAAGGAGAAGCGGCAGCA...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp CTGCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCACGCACATGGCAACGTaGGTCCGCTCAGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: LQPRGRSAHVAHPLCSVPTHMAT*VRSATG
Trigger: ACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGT...GGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS GCA 90 bp GCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTTGTTGAGCGTGTaGAGGAAGATGATGAGGTCCGGCAGGCGGACCGTGGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ASLTATCGSKMLLSV*RKMMRSGRRTVGPK
Trigger: CTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 90 bp ACAGGTTCTGCCCTCAGCCTTTCCATTTCTGAACCCGTGGAGTCCTaGAACCCCCAGCAGGCCTGCCCTATCAAGGGCTGTGAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: TGSALSLSISEPVES*NPQQACPIKGCERH
Trigger: GTGGCGCTCACAGCCCTTGATAGGGCAGGCCTGCTGGGGGTTGCAGGACTCCACGGGTTCAGAAATGGAAAGGCTGAGGGCAGAACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS-3UTR CAA 90 bp GCAGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACCAGCTCAGACAGGCTaGGCTGTGGTTTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: AAKGPFCTCRSPSVLCSPPAQTG*AVVCFG
Trigger: CCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGG...TGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS GCA 90 bp CAAAATCTTGTCGTTGAAATCTACGGCAGGGAGGAGGAGCGACGCTaGGTCTCCCACCGGTGGCAGCAGAGACAGGCAGAGCGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: QNLVVEIYGREEERR*VSHRWQQRQAERSS
Trigger: GGAACTGCGCTCTGCCTGTCTCTGCTGCCACCGGTGGGAGACGCAGCGTCGCTCCTCCTCCCTGCCGTAGATTTCAACGACAAGATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS GCA 90 bp CTTTCCATTTCTGAACCCGTGGAGTCCTGCAACCCCCAGCAGGCCTaGCCTATCAAGGGCTGTGAGCGCCACACCAAGGCACACAAGAGC +
Preference number: 5 (lower is better)
Translates to: LSISEPVESCNPQQA*PIKGCERHTKAHKS
Trigger: GCTCTTGTGTGCCTTGGTGTGGCGCTCACAGCCCTTGATAGGGCAGGCCTGCTGGGGGTTGCAGGACTCCACGGGTTCAGAAATGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS GCA 90 bp GATGTGTGGACATCCAACATGACGCCAAAAGGACATTCTGCCCCGTaGAGCTCACAGGGCAGCCGCCTCCGTCACTGTCCTCTTCCCGAG +
Preference number: 5 (lower is better)
Translates to: DVWTSNMTPKGHSAP*SSQGSRLRHCPLPE
Trigger: CTCGGGAAGAGGACAGTGACGGAGGCGGCTGCCCTGTGAGCTGCACGGGGCAGAATGTCCTTTTGGCGTCATGTTGGATGTCCACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485333.5
CDS CCA 90 bp GCCAGCTGGAGGTGCGTGGCTGTCTGTTCCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAGATGTACGGCTCCATAAACCTGTGC +
Preference number: 5 (lower is better)
Translates to: ASWRCVAVCSRSMMS*SRRLPKMYGSINLC
Trigger: GCACAGGTTTATGGAGCCGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
CDS-3UTR CAA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTAGGCAGGGGTTGCAGTaGGTGTCCACGATGCCCACT +
Preference number: 5 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSARQGLQ*VSTMPT
Trigger: AGTGGGCATCGTGGACACCAACTGCAACCCCTGCCT...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS TCA 90 bp TCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTaGACATCACAGGGAATGGCTCATGTCAGCCCCAGGAGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SQLRQAWLWFALGGE*TSQGMAHVSPRRVG
Trigger: GCCCACCCTCCTGGGGCTGACATGAGCCATTCCCTGTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 90 bp GCCAGCTGGAGGTGCGTGGCTGTCTGTTCCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAGATGTACGGCTCCATAAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: ASWRCVAVCSRSMMS*SRRLPKMYGSINLV
Trigger: TACCAGGTTTATGGAGCCGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472946.1
CDS CCA 90 bp GCCAGCTGGAGGTGCGTGGCTGTCTGTTCCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAGATGTACGGCTCCATAAACCCCATA +
Preference number: 5 (lower is better)
Translates to: ASWRCVAVCSRSMMS*SRRLPKMYGSINPI
Trigger: TATGGGGTTTATGGAGCCGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485333.5
CDS-3UTR CAA 90 bp ATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGGATGTCTAGGCAGGGGTTGCAGTaGGTGTCCACGATGCCCACT +
Preference number: 5 (lower is better)
Translates to: MATLVRSATGSVVERWMSRQGLQ*VSTMPT
Trigger: AGTGGGCATCGTGGACACCAACTGCAACCCCTGCCT...AGACATCCACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS GCA 90 bp GGCTGGGGAAGGGGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTaGTTTGGGAGGAGAGTGAACATCACAGGGAATGGCTCATGTCAG +
Preference number: 5 (lower is better)
Translates to: GWGRGLPAQTGLAVV*FGRRVNITGNGSCQ
Trigger: CTGACATGAGCCATTCCCTGTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCCCCTTCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 90 bp GGGAAGGGGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTaGGAGGAGAGTGAACATCACAGGGAATGGCTCATGTCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: GKGTPSSDRLGCGLL*EESEHHREWLMSAP
Trigger: TGGGGCTGACATGAGCCATTCCCTGTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 90 bp GCCAGCTGGAGGTGCGTGGCTGTCTGTTCCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAGATGTACGGCTCCATAAACCTTACA +
Preference number: 5 (lower is better)
Translates to: ASWRCVAVCSRSMMS*SRRLPKMYGSINLT
Trigger: TGTAAGGTTTATGGAGCCGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS-3UTR CAA 90 bp AAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCATTGTGATGAGGCAGGGGTaGCAGTTGGTGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: KTAPWNQVAKEAAHLKGIVMRQG*QLVSTM
Trigger: CATCGTGGACACCAACTGCAACCCCTGCCTCATCAC...AATGCCTTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp GCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCCAGCTCAGACAGGCTaGGCTGTGGTTTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: AASHYKTAPWNQVAKEAAPAQTG*AVVCFG
Trigger: CCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGG...GGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp GCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCACGCACATGGCAACGTaGGTCCGCTCAGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: ASSISLQNSPLEPGSQGSTHMAT*VRSATG
Trigger: ACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGT...GCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS TCA 90 bp CGGCTCCATAAACCTTACAGGTTCTGCCCTCAGCCTTTCCATTTCTaGACCCGTGGAGTCCTGCAACCCCCAGCAGGCCTGCCCTATCAA +
Preference number: 5 (lower is better)
Translates to: RLHKPYRFCPQPFHF*TRGVLQPPAGLPYQ
Trigger: TTGATAGGGCAGGCCTGCTGGGGGTTGCAGGACTCCACGGGTTCAGAAATGGAAAGGCTGAGGGCAGAACCTGTAAGGTTTATGGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS GCA 90 bp GCAGTTGGTGTCCACGATGCCCACTGTGGGGATGTTCATCTTGGCTaGGTCTCTCACGGCCACGTGTGGCTCAAAGATGTTGTTGAGCGT +
Preference number: 5 (lower is better)
Translates to: AVGVHDAHCGDVHLG*VSHGHVWLKDVVER
Trigger: ACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGACACCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS-3UTR CAA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGTGATGAGGCAGGGGTaGCAGTTGGTGTCCACGATG +
Preference number: 5 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEVMRQG*QLVSTM
Trigger: CATCGTGGACACCAACTGCAACCCCTGCCTCATCAC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 90 bp TACGGCTCCATAAACCTGTGCCGACAGCCAGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGGCTTCTCACGGAAAACAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: YGSINLCRQPALCPR*TRASKRLLTENSSL
Trigger: CAAGGAACTGTTTTCCGTGAGAAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGGTTTATGGAGCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000462948.5
ENST00000472852.1
CDS CCA 90 bp CACTGTGGGGATGTTCATCTTGGCTGCGTCTCTCACGGCCACGTGTaGCTCAAAGATGTTGTTGAGCGTGTGCAGGAAGATGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: HCGDVHLGCVSHGHV*LKDVVERVQEDDEV
Trigger: GACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS-3UTR CAA 90 bp AGCCAAGGGGCCGTTCTGCACATGTCGCTCACCCTCTGTGCTCTGTTCCCCACAAAGAAGTCAGAGTGCTaGAGGGGCTCATTCAAAATC +
Preference number: 5 (lower is better)
Translates to: SQGAVLHMSLTLCALFPTKKSEC*RGSFKI
Trigger: GATTTTGAATGAGCCCCTCAAGCACTCTGACTTCTT...TGTGGGGAACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCTGTGGCTCAAAGATGTaGTTGAGCGTGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TQLGASEWPASSISLQNSCGSKM*LSVCRK
Trigger: CTTCCTGCACACGCTCAACAACATCTTTGAGCCACA...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp AGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGATACGAGAACTGCCGGTaGCGGCTTATAAACAAGATG +
Preference number: 5 (lower is better)
Translates to: RANAHGNVGPLSHWFCGGYENCR*RLINKM
Trigger: CATCTTGTTTATAAGCCGCAACCGGCAGTTCTCGTA...TCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp CTCACCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCTACGAGAACTGCCGGTaGCGGCTTATAAACAAGATG +
Preference number: 5 (lower is better)
Translates to: LTLCALFPTEQTHMATLVYENCR*RLINKM
Trigger: CATCTTGTTTATAAGCCGCAACCGGCAGTTCTCGTA...GACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp TCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAGGCTCAAAGATGTTGTaGAGCGTGTGCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SLQNSPLEPGSQGSGPPEGSKML*SVCRKM
Trigger: CATCTTCCTGCACACGCTCAACAACATCTTTGAGCC...TTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp CATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCACCTGAAAGGCTCAAAGATGTTGTaGAGCGTGTGCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: HYKTAPWNQVAKEAAHLKGSKML*SVCRKM
Trigger: CATCTTCCTGCACACGCTCAACAACATCTTTGAGCC...TTTCAGGTGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp AGCATCTCATTACAAAACAGCCCCCTGGAACCAGGTAGCCAAGGAAGCGGCCCATGTGGCTCAAAGATGTaGTTGAGCGTGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SISLQNSPLEPGSQGSGPCGSKM*LSVCRK
Trigger: CTTCCTGCACACGCTCAACAACATCTTTGAGCCACA...TGGGCCGCTTCCTTGGCTACCTGGTTCCAGGGGGCTGTTTTGTAATGAGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp GCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCCCCCTGGAACCATTCAAAATCTTGTCGTaGAAATCGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASEWPASSISLQNSPLEPFKILS*KSVLSS
Trigger: GGAGGACAGCACCGATTTCAACGACAAGATTTTGAA...TGGTTCCAGGGGGCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp AGAGCAAACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGATTCAAAATCTTGTCGTaGAAATCGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RANAHGNVGPLSHWFCGGFKILS*KSVLSS
Trigger: GGAGGACAGCACCGATTTCAACGACAAGATTTTGAA...TCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp ACCCAGCTGGGAGCCTCTGAGTGGCCTGCCAGCAGCATCTCATTACAAAACAGCGGCTCATTCAAAATCTaGTCGTTGAAATCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TQLGASEWPASSISLQNSGSFKI*SLKSVL
Trigger: CAGCACCGATTTCAACGACAAGATTTTGAATGAGCC...GCTGTTTTGTAATGAGATGCTGCTGGCAGGCCACTCAGAGGCTCCCAGCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp GGACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTGAACGGCTCATTCAAAATCTaGTCGTTGAAATCGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GLPAQTGLAVVCFGRRVNGSFKI*SLKSVL
Trigger: CAGCACCGATTTCAACGACAAGATTTTGAATGAGCC...GTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp AACGCACATGGCAACGTTGGTCCGCTCAGCCACTGGTTCTGTGGTGGAACGGTGAACAGTTCCTTGACATaGAAGAAGTCAGAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: NAHGNVGPLSHWFCGGTVNSSLT*KKSECL
Trigger: CAAGCACTCTGACTTCTTCAATGTCAAGGAACTGTT...CACCGTTCCACCACAGAACCAGTGGCTGAGCGGACCAACGTTGCCATGTGCGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS-3UTR CAA 90 bp CCCTCTGTGCTCTGTTCCCCACAGAGCAAACGCACATGGCAACGTTGGTCCGCTAACAGTTCCTTGACATaGAAGAAGTCAGAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSVLCSPQSKRTWQRWSANSSLT*KKSECL
Trigger: CAAGCACTCTGACTTCTTCAATGTCAAGGAACTGTT...AGCGGACCAACGTTGCCATGTGCGTTTGCTCTGTGGGGAACAGAGCACAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 90 bp TGTAATCACCTAAAACTGTGCCGACAGCCAGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGGCTTCTCACGGAAAACAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: CNHLKLCRQPALCPR*TRASKRLLTENSSL
Trigger: CAAGGAACTGTTTTCCGTGAGAAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGTTTTAGGTGATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS GCA 72 bp GCCTCCCCTTCCGTCGCCATCCGCGCGGGGCCGCAGTaGCGCCTACAGGCCCGGAGGAGCCACAGCGCTGTC +
Preference number: 6 (lower is better)
Translates to: ASPSVAIRAGPQ*RLQARRSHSAV
Trigger: GACAGCGCTGTGGCTCCTCCGGGCCTGTAGGCGGCACTGCGGCCCCGCGCGGATGGCGACGGAAGGGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS GCA 72 bp GGGAGGAGCCCAGCGGAGCGCGCAGTTTCGACCGCGTaGAGCGCCCAGGCCCCTCTAGGGTTCGCATCCCCC +
Preference number: 6 (lower is better)
Translates to: GRSPAERAVSTA*SAQAPLGFASP
Trigger: GGGGGATGCGAACCCTAGAGGGGCCTGGGCGCTGCACGCGGTCGAAACTGCGCGCTCCGCTGGGCTCCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462948.5
CDS CCA 72 bp TATTCGGGGCAGCGCGGCCGAGGATGTCGCCATGGCTaGGACGCGGGGCAGAGCGAGGTCTCCCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: YSGQRGRGCRHG*DAGQSEVSLQA
Trigger: GGCCTGGAGGGAGACCTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGGCCGCGCTGCCCCGAATA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS CCA 72 bp CGAGTATTCGGGGCAGCGCGGCCGAGGATGTCGCCATaGCTGGGACGCGGGGCAGAGCGAGGTCTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: RVFGAARPRMSP*LGRGAERGLPP
Trigger: TGGAGGGAGACCTCGCTCTGCCCCGCGTCCCAGCCATGGCGACATCCTCGGCCGCGCTGCCCCGAATACTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371785.5
CDS CCA 72 bp GAGAAAGCCCAACCAGCGCGACGGGGCCCGGGCACCTaGGGGGAAGTAGATAGAGGTCCTGGCGCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: EKAQPARRGPGT*GEVDRGPGAES
Trigger: GGACTCGGCGCCAGGACCTCTATCTACTTCCCCCCAGGTGCCCGGGCCCCGTCGCGCTGGTTGGGCTTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453385.1
CDS CCA 72 bp CACCCCTGCTCCCAAGTGCCTTCTGTGACACCGAGGTaGGGAGCCGGGAGCCCAGCAGCCCCAGGAAAGACC +
Preference number: 6 (lower is better)
Translates to: HPCSQVPSVTPR*GAGSPAAPGKT
Trigger: GGTCTTTCCTGGGGCTGCTGGGCTCCCGGCTCCCCACCTCGGTGTCACAGAAGGCACTTGGGAGCAGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS TCA 72 bp CAAAGAGGAGGCGCGCGTTGGTCAGCATGCCGCCCCTaGAGTAGCGAGTGTGGGCGTACTCGCCACAGTCAC +
Preference number: 6 (lower is better)
Translates to: QRGGARWSACRP*SSECGRTRHSH
Trigger: GTGACTGTGGCGAGTACGCCCACACTCGCTACTTCAGGGGCGGCATGCTGACCAACGCGCGCCTCCTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp GTCGTTGAAATCTACGGCAGGGAGGAGGAGCGACGCTaGGTCTCCCACCGGTGGCAGCAGAGACAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: VVEIYGREEERR*VSHRWQQRQAE
Trigger: CTCTGCCTGTCTCTGCTGCCACCGGTGGGAGACGCAGCGTCGCTCCTCCTCCCTGCCGTAGATTTCAACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS TCA 72 bp CCAGCTGGAGGTGCGTGGCTGTCTGTTCCAGGTCGATaGTGTCGTGGTCCAGGCGGCTCCCAAAGATGTACG +
Preference number: 6 (lower is better)
Translates to: PAGGAWLSVPGR*CRGPGGSQRCT
Trigger: CGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp GCCATGTGGGCGGTGAAGTTCAAGGCCAGCTGGAGGTaGGTGGCTGTCTGTTCCAGGTCGATGATGTCGTGG +
Preference number: 6 (lower is better)
Translates to: AMWAVKFKASWR*VAVCSRSMMSW
Trigger: CCACGACATCATCGACCTGGAACAGACAGCCACGCACCTCCAGCTGGCCTTGAACTTCACCGCCCACATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp GCCCTCAGCCTTTCCATTTCTGAACCCGTGGAGTCCTaGAACCCCCAGCAGGCCTGCCCTATCAAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: ALSLSISEPVES*NPQQACPIKGC
Trigger: ACAGCCCTTGATAGGGCAGGCCTGCTGGGGGTTGCAGGACTCCACGGGTTCAGAAATGGAAAGGCTGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS CCA 72 bp GGCAGGGGTTGCAGTTGGTGTCCACGATGCCCACTGTaGGGATGTTCATCTTGGCTGCGTCTCTCACGGCCA +
Preference number: 6 (lower is better)
Translates to: GRGCSWCPRCPL*GCSSWLRLSRP
Trigger: TGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGACACCAACTGCAACCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp ACGGCCACGTGTGGCTCAAAGATGTTGTTGAGCGTGTaGAGGAAGATGATGAGGTCCGGCAGGCGGACCGTG +
Preference number: 6 (lower is better)
Translates to: TATCGSKMLLSV*RKMMRSGRRTV
Trigger: CACGGTCCGCCTGCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp TGTGTGGACATCCAACATGACGCCAAAAGGACATTCTaGCCCGTGCAGCTCACAGGGCAGCCGCCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: CVDIQHDAKRTF*PVQLTGQPPPS
Trigger: TGACGGAGGCGGCTGCCCTGTGAGCTGCACGGGGCAGAATGTCCTTTTGGCGTCATGTTGGATGTCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485333.5
CDS CAA 90 bp ATCTTGGCTGCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTTGTaGAGCGTGTGCAGGAAGATGATGAGGTCCGGCAGGCGGACCGTG +
Preference number: 6 (lower is better)
Translates to: ILAASLTATCGSKML*SVCRKMMRSGRRTV
Trigger: CACGGTCCGCCTGCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 90 bp TTCATCTTGGCTGCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTaGTTGAGCGTGTGCAGGAAGATGATGAGGTCCGGCAGGCGGACC +
Preference number: 6 (lower is better)
Translates to: FILAASLTATCGSKM*LSVCRKMMRSGRRT
Trigger: GGTCCGCCTGCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS TCA 72 bp GCGCCACACCAAGGCACACAAGAGCGTCCGCCAAGCTaGGGAATAAACTCCTGCTTCTCTGTGGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: APHQGTQERPPS*GINSCFSVGLC
Trigger: ACAGAGCCCCACAGAGAAGCAGGAGTTTATTCCTCAGCTTGGCGGACGCTCTTGTGTGCCTTGGTGTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS CCA 72 bp AGGTGCGTGGCTGTCTGTTCCAGGTCGATGATGTCGTaGTCCAGGCGGCTCCCAAAGATGTACGGCTCCATA +
Preference number: 6 (lower is better)
Translates to: RCVAVCSRSMMS*SRRLPKMYGSI
Trigger: TATGGAGCCGTACATCTTTGGGAGCCGCCTGGACCACGACATCATCGACCTGGAACAGACAGCCACGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CCA 72 bp TGGTGTCCACGATGCCCACTGTGGGGATGTTCATCTTaGCTGCGTCTCTCACGGCCACGTGTGGCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: WCPRCPLWGCSS*LRLSRPRVAQR
Trigger: TCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CCA 72 bp AATCTTGTCGTTGAAATCCTATCCATGGTGAGGCGGTaGCCTCAGCCCGCTGTGCTACGTCAGGCAGGACCG +
Preference number: 6 (lower is better)
Translates to: NLVVEILSMVRR*PQPAVLRQAGP
Trigger: CGGTCCTGCCTGACGTAGCACAGCGGGCTGAGGCCACCGCCTCACCATGGATAGGATTTCAACGACAAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462948.5
CDS CCA 72 bp GGTGCTCTGTGCCGACAGCCAGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGGCTTCTCACGGAAAAC +
Preference number: 6 (lower is better)
Translates to: GALCRQPALCPR*TRASKRLLTEN
Trigger: GTTTTCCGTGAGAAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485333.5
CDS CAA 72 bp GCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTTGTaGAGCGTGTGCAGGAAGATGATGAGGTCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: ASLTATCGSKML*SVCRKMMRSGR
Trigger: CCTGCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 72 bp GCTGCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTaGTTGAGCGTGTGCAGGAAGATGATGAGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: AASLTATCGSKM*LSVCRKMMRSG
Trigger: GCCGGACCTCATCATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 72 bp TTGGTGTCCACGATGCCCACTGTGGGGATGTTCATCTaGGCTGCGTCTCTCACGGCCACGTGTGGCTCAAAG +
Preference number: 6 (lower is better)
Translates to: LVSTMPTVGMFI*AASLTATCGSK
Trigger: CTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 90 bp GGGTTGCAGTTGGTGTCCACGATGCCCACTGTGGGGATGTTCATCTaGGCTGCGTCTCTCACGGCCACGTGTGGCTCAAAGATGTTGTTG +
Preference number: 6 (lower is better)
Translates to: GLQLVSTMPTVGMFI*AASLTATCGSKMLL
Trigger: CAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGACACCAACTGCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS TCA 72 bp AAACCTTACAGGTTCTGCCCTCAGCCTTTCCATTTCTaGACCCGTGGAGTCCTGCAACCCCCAGCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: KPYRFCPQPFHF*TRGVLQPPAGL
Trigger: CAGGCCTGCTGGGGGTTGCAGGACTCCACGGGTTCAGAAATGGAAAGGCTGAGGGCAGAACCTGTAAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS GCA 72 bp GTCCACGATGCCCACTGTGGGGATGTTCATCTTGGCTaGGTCTCTCACGGCCACGTGTGGCTCAAAGATGTT +
Preference number: 6 (lower is better)
Translates to: VHDAHCGDVHLG*VSHGHVWLKDV
Trigger: AACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATCCCCACAGTGGGCATCGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS TCA 72 bp AGACAGGCTTGGCTGTGGTTTGCTTTGGGAGGAGAGTaGACATCACAGGGAATGGCTCATGTCAGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: RQAWLWFALGGE*TSQGMAHVSPR
Trigger: CCTGGGGCTGACATGAGCCATTCCCTGTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CAA 72 bp ATGTACGGCTCCATAAACCTGTGCCGACAGCCAGCTTaGTGTCCCAGATGGACTCGGGCATCGAAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: MYGSINLCRQPA*CPRWTRASKRL
Trigger: AAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGGTTTATGGAGCCGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000462948.5
ENST00000472852.1
CDS CCA 72 bp ATAAACCTGTGCCGACAGCCAGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGGCTTCTCACGGAAAAC +
Preference number: 6 (lower is better)
Translates to: INLCRQPALCPR*TRASKRLLTEN
Trigger: GTTTTCCGTGAGAAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000462948.5
ENST00000472852.1
CDS CCA 72 bp ACTCCCAGCTCAGACAGGCTTGGCTGTGGTTTGCTTTaGGAGGAGAGTGAACATCACAGGGAATGGCTCATG +
Preference number: 6 (lower is better)
Translates to: TPSSDRLGCGLL*EESEHHREWLM
Trigger: CATGAGCCATTCCCTGTGATGTTCACTCTCCTCCCAAAGCAAACCACAGCCAAGCCTGTCTGAGCTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241600.10
ENST00000371785.5
CDS CCA 72 bp CTAAAACTGTGCCGACAGCCAGCTTTGTGTCCCAGATaGACTCGGGCATCGAAGAGGCTTCTCACGGAAAAC +
Preference number: 6 (lower is better)
Translates to: LKLCRQPALCPR*TRASKRLLTEN
Trigger: GTTTTCCGTGAGAAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS CCA 72 bp TCTCTGTGGGGCTCTGTATTCCCATGTGGAGGAGGATaGGGCTGTAATCACCTAAAACTGTGCCGACAGCCA +
Preference number: 6 (lower is better)
Translates to: SLWGSVFPCGGG*GCNHLKLCRQP
Trigger: TGGCTGTCGGCACAGTTTTAGGTGATTACAGCCCCATCCTCCTCCACATGGGAATACAGAGCCCCACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS CAA 72 bp TCAGAGTGCTTGAGGGGCTCATTCAAAATCTTGTCGTaGAAATCTACGGCAGGGAGGAGGAGCGACGCTGCG +
Preference number: 6 (lower is better)
Translates to: SECLRGSFKILS*KSTAGRRSDAA
Trigger: CGCAGCGTCGCTCCTCCTCCCTGCCGTAGATTTCAACGACAAGATTTTGAATGAGCCCCTCAAGCACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS CAA 72 bp GGCTGTAATCACCTAAAACTGTGCCGACAGCCAGCTTaGTGTCCCAGATGGACTCGGGCATCGAAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: GCNHLKLCRQPA*CPRWTRASKRL
Trigger: AAGCCTCTTCGATGCCCGAGTCCATCTGGGACACAAAGCTGGCTGTCGGCACAGTTTTAGGTGATTACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488610.5
CDS CAA 90 bp TTGAAGAAGTCAGAGTGCTTGAGGGGCTCATTCAAAATCTTGTCGTaGAAATCTACGGCAGGGAGGAGGAGCGACGCTGCGTCTCCCACC +
Preference number: 6 (lower is better)
Translates to: LKKSECLRGSFKILS*KSTAGRRSDAASPT
Trigger: GGTGGGAGACGCAGCGTCGCTCCTCCTCCCTGCCGTAGATTTCAACGACAAGATTTTGAATGAGCCCCTCAAGCACTCTGACTTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS CCA 72 bp GATGTTCATCTTGGCTGCGTCTCTCACGGCCACGTGTaGCTCAAAGATGTTGTTGAGCGTGTGCAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: DVHLGCVSHGHV*LKDVVERVQED
Trigger: ATCTTCCTGCACACGCTCAACAACATCTTTGAGCCACACGTGGCCGTGAGAGACGCAGCCAAGATGAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS GCA 72 bp CAGTCACGGGCCATGTTCTCAATCAGGTACGAGAACTaGCGGTTGCGGCTTATAAACAAGATGATGCCCTTG +
Preference number: 6 (lower is better)
Translates to: QSRAMFSIRYEN*RLRLINKMMPL
Trigger: CAAGGGCATCATCTTGTTTATAAGCCGCAACCGGCAGTTCTCGTACCTGATTGAGAACATGGCCCGTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000472852.1
ENST00000472946.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 72 bp AAGAAGTCAGAGTGCTTGAGGGGCTCATTCAAAATCTaGTCGTTGAAATCGGTGCTGTCCTCCGACTCGCGG +
Preference number: 6 (lower is better)
Translates to: KKSECLRGSFKI*SLKSVLSSDSR
Trigger: CCGCGAGTCGGAGGACAGCACCGATTTCAACGACAAGATTTTGAATGAGCCCCTCAAGCACTCTGACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000485333.5
ENST00000488610.5
CDS CAA 90 bp TTGACATTGAAGAAGTCAGAGTGCTTGAGGGGCTCATTCAAAATCTaGTCGTTGAAATCTACGGCAGGGAGGAGGAGCGACGCTGCGTCT +
Preference number: 6 (lower is better)
Translates to: LTLKKSECLRGSFKI*SLKSTAGRRSDAAS
Trigger: AGACGCAGCGTCGCTCCTCCTCCCTGCCGTAGATTTCAACGACAAGATTTTGAATGAGCCCCTCAAGCACTCTGACTTCTTCAATGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS CAA 72 bp AAGAAGTCAGAGTGCTTGAGGGGCTCATTCAAAATCTaGTCGTTGAAATCTACGGCAGGGAGGAGGAGCGAC +
Preference number: 6 (lower is better)
Translates to: KKSECLRGSFKI*SLKSTAGRRSD
Trigger: GTCGCTCCTCCTCCCTGCCGTAGATTTCAACGACAAGATTTTGAATGAGCCCCTCAAGCACTCTGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472852.1
CDS CAA 72 bp TCGAAGAGGCTTCTCACGGAAAACAGTTCCTTGACATaGAAGAAGTCAGAGTGCTTGAGGGGCTCATTCAAA +
Preference number: 6 (lower is better)
Translates to: SKRLLTENSSLT*KKSECLRGSFK
Trigger: TTTGAATGAGCCCCTCAAGCACTCTGACTTCTTCAATGTCAAGGAACTGTTTTCCGTGAGAAGCCTCTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000241600.10
ENST00000371785.5
ENST00000453385.1
ENST00000462948.5
ENST00000472852.1
ENST00000485333.5
ENST00000488610.5