Pregenerated sensors for MRPS18B (Homo sapiens)
Ensembl gene IDs: ENSG00000203624, ENSG00000204568, ENSG00000227420Ensembl transcript IDs: ENST00000259873.5, ENST00000327800.10, ENST00000400594.3, ENST00000412451.6, ENST00000412843.2, ENST00000418070.2, ENST00000426945.6, ENST00000428224.2, ENST00000430402.6, ENST00000437247.2, ENST00000440992.2, ENST00000451032.6, ENST00000454427.6, ENST00000460640.5, ENST00000464426.5, ENST00000468755.1, ENST00000469397.1, ENST00000469706.5, ENST00000472229.1, ENST00000472267.5, ENST00000472444.1, ENST00000476123.5, ENST00000477010.1, ENST00000481158.5, ENST00000489289.1, ENST00000493769.1, ENST00000498459.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTTGGAGTGCAGGGGTGTaGCTGCAACTCACTGCAACC | + |
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Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPWSAGV*LQLTAT Trigger: GGTTGCAGTGAGTTGCAGTCACACCCCTGCACTCCA...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGTGACTGCAACTCACTaGAACCTCCGCCTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPVTATH*NLRLLG Trigger: TCCCAGGAGGCGGAGGTTGCAGTGAGTTGCAGTCAC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTACTCCTGGGATCAAGTaGTCAGCCCACCTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPTPGIK*SAHLGF Trigger: GAAGCCAAGGTGGGCTGATCACTTGATCCCAGGAGT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGACGAGGTTTCACCATaGTGCCCAGGCTGGTCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPDEVSP*CPGWSQ Trigger: TTGAGACCAGCCTGGGCACCATGGTGAAACCTCGTC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGCAACCTCCGCCTCCTaGGATCAAGTGATCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPATSAS*DQVILP Trigger: AGGTAGGATCACTTGATCCCAGGAGGCGGAGGTTGC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTAGCCTCCCCAATAGTTaGGACTACAGGTGTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPSLPNS*DYRCAP Trigger: TGGTGCACACCTGTAGTCTCAACTATTGGGGAGGCT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTCTGGTCTCAAACTCCTaGGATCAAGTGATCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPLVSNS*DQVISP Trigger: TGGGCTGATCACTTGATCCCAGGAGTTTGAGACCAG...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| 3UTR GCA 72 bp | CCCAGGCTGGAGTGCAGGGGTGTGACTGCAACTCACTaGAACCTCCGCCTCCTGGGATCAAGTGATCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: PRLECRGVTATH*NLRLLGSSDPT Trigger: GGTAGGATCACTTGATCCCAGGAGGCGGAGGTTGCAGTGAGTTGCAGTCACACCCCTGCACTCCAGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTAGGACAAGCCCGCAGTaGGGAAGGCGGCCCCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPRTSPQ*GRRPHV Trigger: AACGTGGGGCCGCCTTCCGCACTGCGGGCTTGTCCT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGACCAGGGTGGGGGCTaGCGGAGTAGCACTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPDQGGG*RSSTHS Trigger: GCTGTGAGTGCTACTCCGCCAGCCCCCACCCTGGTC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTCAGACGCCGCCATCTTaGCGTACGCCCAGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPQTPPS*RTPRTG Trigger: TCCTGTCCTGGGCGTACGTCAAGATGGCGGCGTCTG...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGTCAGGACGGAAGCGTaGAAGGGAAGGCATGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPVRTEA*KGRHGG Trigger: TCCCCCATGCCTTCCCTTTCACGCTTCCGTCCTGAC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTCTTCCGAGTCCGCTGTaGGGGTACACCACCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPLPSPL*GYTTLV Trigger: CACAAGGGTGGTGTACCCCCACAGCGGACTCGGAAG...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGCCCAGGACAGGAATTaGCGGAAAGGCAACTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPAQDRN*RKGNCA Trigger: TGCGCAGTTGCCTTTCCGTCAATTCCTGTCCTGGGC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGGGGGATGTGGTAAATaGGGAGACCATGATCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPGGCGK*GDHDPW Trigger: CCAGGGATCATGGTCTCCTCATTTACCACATCCCCC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGCACTCACAGCCCCATaGGAGGTACTGAAGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPALTAP*EVLKSR Trigger: CCTTGACTTCAGTACCTCTCATGGGGCTGTGAGTGC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR TCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGGGGGATGTGGTAAATaGGGAGACCTGTGTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPGGCGK*GDLCME Trigger: CTCCATACACAGGTCTCCTCATTTACCACATCCCCC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000400594.3 ENST00000412843.2 ENST00000418070.2 ENST00000428224.2 ENST00000437247.2 ENST00000440992.2 |
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| CDS-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTTGGGTCAACCGCTTGTaGTGCTTCACACAGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPWVNRL*CFTQTP Trigger: AGGAGTCTGTGTGAAGCAGCACAAGCGGTTGACCCA...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTTGGGCGCAGACAAATTaGTCCAAGAGCTTCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPWAQTN*SKSFTF Trigger: GAACGTGAAGCTCTTGGAGCAATTTGTCTGCGCCCA...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTAAGATGATACCCGTGTaGGCGCAGACAAATTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPKMIPV*AQTNCS Trigger: GGAGCAATTTGTCTGCGCCCACACGGGTATCATCTT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTAAAGGCAACTGCGCATaGTTCAGGAAACTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPKGNCA*FRKLSR Trigger: CCTACTCAGTTTCCTGAAGCATGCGCAGTTGCCTTT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR GCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTTGGGCGCAGACAAATTaGTCCAAGAGCTTCACGTTA | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPWAQTN*SKSFTL Trigger: TAACGTGAAGCTCTTGGAGCAATTTGTCTGCGCCCA...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000400594.3 ENST00000412843.2 ENST00000418070.2 ENST00000428224.2 ENST00000437247.2 ENST00000440992.2 |
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| CDS-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGAGGAGACCTGTGTATaGAGCATAGAAGATGATACC | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPEETCV*SIEDDT Trigger: GGTATCATCTTCTATGCTCCATACACAGGTCTCCTC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000400594.3 ENST00000412843.2 ENST00000418070.2 ENST00000428224.2 ENST00000437247.2 ENST00000440992.2 |
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| CDS-3UTR CCA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGAACCATATCGCTCCTaGTATTCTTCTGATTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPEPYRS*YSSDSR Trigger: TCTGGAATCAGAAGAATACCAGGAGCGATATGGTTC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 90 bp | AGGACAGGAATTGACGGAAAGGCAACTGCGCATGCTTCAGGAAACTaGGTAGGGCAGGGCCAAGGACAAGCCCGCAGTGCGGAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RTGIDGKATAHASGN*VGQGQGQARSAEGG Trigger: GCCGCCTTCCGCACTGCGGGCTTGTCCTTGGCCCTGCCCTACTCAGTTTCCTGAAGCATGCGCAGTTGCCTTTCCGTCAATTCCTGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 90 bp | TTTAATACAGACGCCGCCATCTTGACGTACGCCCAGGACAGGAATTaGCGGAAAGGCAACTGCGCATGCTTCAGGAAACTGAGTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: FNTDAAILTYAQDRN*RKGNCACFRKLSRA Trigger: TGCCCTACTCAGTTTCCTGAAGCATGCGCAGTTGCCTTTCCGTCAATTCCTGTCCTGGGCGTACGTCAAGATGGCGGCGTCTGTATTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 90 bp | CAGCCCAGACGGGGCGAGAACCATATCGCTCCTGGTATTCTGAAATaGAAGATCATACAAGTTATTCCTGGGTGGGAGTGTAGTGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPRRGENHIAPGILK*KIIQVIPGWECSGW Trigger: CCACCCACTACACTCCCACCCAGGAATAACTTGTATGATCTTTCATTTCAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000460640.5 ENST00000464426.5 ENST00000469706.5 ENST00000472267.5 ENST00000476123.5 ENST00000481158.5 ENST00000498459.5 |
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| CDS-3UTR CAA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTAAGGCGGCCCCACGTTaGCGTCAGGACGGAAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPKAAPR*RQDGSV Trigger: CACGCTTCCGTCCTGACGCAAACGTGGGGCCGCCTT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 90 bp | GTAGTCAGCCCAGACGGGGCGAGAACCATATCGCTCCTGGTATTCTaGAATGAAAGATCATACAAGTTATTCCTGGGTGGGAGTGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: VVSPDGARTISLLVF*NERSYKLFLGGSVV Trigger: CACTACACTCCCACCCAGGAATAACTTGTATGATCTTTCATTTCAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGGGCTGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000460640.5 ENST00000464426.5 ENST00000469706.5 ENST00000472267.5 ENST00000476123.5 ENST00000481158.5 ENST00000498459.5 |
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| CDS-3UTR CAA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTACAGACGCCGCCATCTaGACGTACGCCCAGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPTDAAI*TYAQDR Trigger: CCTGTCCTGGGCGTACGTCAAGATGGCGGCGTCTGT...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR CAA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTCGCCCAGGACAGGAATaGACGGAAAGGCAACTGCGC | + |
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Preference number: 5 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPRPGQE*TERQLR Trigger: GCGCAGTTGCCTTTCCGTCAATTCCTGTCCTGGGCG...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS-3UTR CAA 90 bp | ACAACTCTTCAGGGTGATATCCCATCACATAAACCTACATACACATTATCTCCTGTGGGCGCAGACAAATaGCTCCAAGAGCTTCACGTT | + |
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Preference number: 5 (lower is better) Translates to: TTLQGDIPSHKPTYTLSPVGADK*LQELHV Trigger: AACGTGAAGCTCTTGGAGCAATTTGTCTGCGCCCAC...AGGAGATAATGTGTATGTAGGTTTATGTGATGGGATATCACCCTGAAGAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000259873.5 ENST00000327800.10 ENST00000400594.3 ENST00000412451.6 ENST00000412843.2 ENST00000418070.2 ENST00000426945.6 ENST00000428224.2 ENST00000430402.6 ENST00000437247.2 ENST00000440992.2 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 90 bp | GTAGTCAGCCCAGACGGGGCGAGAACCATATCGCTCCTGGTATTCTaGAATGAAAGATCATACAAGTTATTCCTTCTGATTCCAGATATT | + |
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Preference number: 5 (lower is better) Translates to: VVSPDGARTISLLVF*NERSYKLFLLIPDI Trigger: AATATCTGGAATCAGAAGGAATAACTTGTATGATCTTTCATTTCAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGGGCTGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000468755.1 ENST00000469397.1 ENST00000472229.1 ENST00000472444.1 ENST00000477010.1 ENST00000489289.1 ENST00000493769.1 |
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| CDS CAA 90 bp | GGCAGGGCCAAGGACAAGCCCGCAGTGCGGAAGGCGGCCCCACGTTaGCGTCAGGACGGAAGCGTGAAAGGGAAGGCATGGGGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GRAKDKPAVRKAAPR*RQDGSVKGKAWGRS Trigger: GCTTCTCCCCCATGCCTTCCCTTTCACGCTTCCGTCCTGACGCAAACGTGGGGCCGCCTTCCGCACTGCGGGCTTGTCCTTGGCCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS GCA 72 bp | AAACTGAGTAGGGCAGGGCCAAGGACAAGCCCGCAGTaGGGAAGGCGGCCCCACGTTTGCGTCAGGACGGAA | + |
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Preference number: 6 (lower is better) Translates to: KLSRAGPRTSPQ*GRRPHVCVRTE Trigger: TTCCGTCCTGACGCAAACGTGGGGCCGCCTTCCGCACTGCGGGCTTGTCCTTGGCCCTGCCCTACTCAGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS CAA 72 bp | AAGGACAAGCCCGCAGTGCGGAAGGCGGCCCCACGTTaGCGTCAGGACGGAAGCGTGAAAGGGAAGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: KDKPAVRKAAPR*RQDGSVKGKAW Trigger: CCATGCCTTCCCTTTCACGCTTCCGTCCTGACGCAAACGTGGGGCCGCCTTCCGCACTGCGGGCTTGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 72 bp | GACGCCGCCATCTTGACGTACGCCCAGGACAGGAATTaGCGGAAAGGCAACTGCGCATGCTTCAGGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: DAAILTYAQDRN*RKGNCACFRKL Trigger: CAGTTTCCTGAAGCATGCGCAGTTGCCTTTCCGTCAATTCCTGTCCTGGGCGTACGTCAAGATGGCGGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS TCA 72 bp | GCCTCAGCACGGTGTTTAATACAGACGCCGCCATCTTaGCGTACGCCCAGGACAGGAATTGACGGAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASARCLIQTPPS*RTPRTGIDGKA Trigger: TGCCTTTCCGTCAATTCCTGTCCTGGGCGTACGTCAAGATGGCGGCGTCTGTATTAAACACCGTGCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS CAA 72 bp | AGACGCCGCCATCTTGACGTACGCCCAGGACAGGAATaGACGGAAAGGCAACTGCGCATGCTTCAGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: RRRHLDVRPGQE*TERQLRMLQET Trigger: AGTTTCCTGAAGCATGCGCAGTTGCCTTTCCGTCAATTCCTGTCCTGGGCGTACGTCAAGATGGCGGCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327800.10 ENST00000412451.6 ENST00000426945.6 ENST00000430402.6 ENST00000451032.6 ENST00000454427.6 |
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| CDS CAA 72 bp | CAAACACGTCAGAAAAAGTGCTGCTGTTACTGTTACTaGTGGCCTCCCCGCACTCCACATCCCACTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QTRQKKCCCYCY*WPPRTPHPTLR Trigger: TCTGAGAGTGGGATGTGGAGTGCGGGGAGGCCACAAGTAACAGTAACAGCAGCACTTTTTCTGACGTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000460640.5 ENST00000464426.5 ENST00000469706.5 ENST00000472267.5 ENST00000476123.5 ENST00000481158.5 ENST00000498459.5 |
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| CDS TCA 72 bp | CCAGACGGGGCGAGAACCATATCGCTCCTGGTATTCTaGAATGAAAGATCATACAAGTTATTCCTGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PDGARTISLLVF*NERSYKLFLGG Trigger: CCCACCCAGGAATAACTTGTATGATCTTTCATTTCAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000460640.5 ENST00000464426.5 ENST00000469706.5 ENST00000472267.5 ENST00000476123.5 ENST00000481158.5 ENST00000498459.5 |
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| CDS CAA 90 bp | AAGGATGTTCAAACACGTCAGAAAAAGTGCTGCTGTTACTGTTACTaGTGGCCTCCCCGCACTCCACATCCCACTCTCAGAAACTCACAA | + |
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Preference number: 6 (lower is better) Translates to: KDVQTRQKKCCCYCY*WPPRTPHPTLRNSQ Trigger: TTGTGAGTTTCTGAGAGTGGGATGTGGAGTGCGGGGAGGCCACAAGTAACAGTAACAGCAGCACTTTTTCTGACGTGTTTGAACATCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000460640.5 ENST00000464426.5 ENST00000469706.5 ENST00000472267.5 ENST00000476123.5 ENST00000481158.5 ENST00000498459.5 |
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| CDS TCA 72 bp | CCAGACGGGGCGAGAACCATATCGCTCCTGGTATTCTaGAATGAAAGATCATACAAGTTATTCCTTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: PDGARTISLLVF*NERSYKLFLLI Trigger: AATCAGAAGGAATAACTTGTATGATCTTTCATTTCAGAATACCAGGAGCGATATGGTTCTCGCCCCGTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000468755.1 ENST00000469397.1 ENST00000472229.1 ENST00000472444.1 ENST00000477010.1 ENST00000489289.1 ENST00000493769.1 |
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