Pregenerated sensors for MRPS17 (Homo sapiens)
Ensembl gene IDs: ENSG00000239789Ensembl transcript IDs: ENST00000285298.9, ENST00000443449.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCTGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PVIPALLGQDGQIAPRSPPGGGA*SEPRLH Trigger: GTGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...CGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGAGACCAACCTGGGCCAGGGAGGTCAAGGCTaGAGTGAGCCAAGATCATAC | + |
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Preference number: 2 (lower is better) Translates to: TVRPRWADCSQESETNLGQGGQG*SEPRSY Trigger: GTATGATCTTGGCTCACTGCAGCCTTGACCTCCCTG...GCCCAGGTTGGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGCTCAGAAGGCTGGGGTaGAAAGATGCTAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PVIPALLGQDGQIAPRSPLRRLG*KDARAR Trigger: CCTGGCTCTAGCATCTTTCCACCCCAGCCTTCTGAG...CGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR CCA 72 bp | GTGGTACGCTCCTGTGTTCCCAGCTACTCAGAAGGCTaGGGTGGAAAGATGCTAGAGCCAGGGAGGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: VVRSCVPSYSEG*GGKMLEPGRSR Trigger: CCTTGACCTCCCTGGCTCTAGCATCTTTCCACCCCAGCCTTCTGAGTAGCTGGGAACACAGGAGCGTACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR CCA 72 bp | GCTCAGGCCTGTAATCCCAGCACTGTTAGGCCAAGATaGGCAGATTGCTCCCAGGAGTCCGAGACCAACCTG | + |
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Preference number: 3 (lower is better) Translates to: AQACNPSTVRPR*ADCSQESETNL Trigger: CAGGTTGGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGGCCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR GCA 72 bp | TGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTaGTCCCAGGAGTCCGAGACCAACCTGGGCAACACA | + |
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Preference number: 3 (lower is better) Translates to: CNPSTVRPRWAD*SQESETNLGNT Trigger: TGTGTTGCCCAGGTTGGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| 3UTR-3UTR CAA 90 bp | ACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGAGACCAACCTGGGCTCTAAAACAGTGAGCTaGCTAAGCACAGTGGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: TVRPRWADCSQESETNLGSKTVS*LSTVAH Trigger: GTGAGCCACTGTGCTTAGCAAGCTCACTGTTTTAGA...GCCCAGGTTGGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR GCA 90 bp | ACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGAGACCAACCTGGGCCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TVRPRWADCSQESETNLGPGGGA*SEPRLH Trigger: GTGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...GCCCAGGTTGGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR GCA 90 bp | CCTGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGCCAAGATGGGCAGATTaGTCCCAGGAGTCCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: PVIPALLGQDGQIAPRSPPRWAD*SQESET Trigger: GGTCTCGGACTCCTGGGAGCAATCTGCCCATCTTGG...CGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR TCA 90 bp | AGTGGTACGCTCCTGTGTTCCCAGCTACTCAGAAGGCTGGGGTGGAAAGATGCTGAGGTCGTGGTGGGCTaGGATCATGCCATTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: SGTLLCSQLLRRLGWKDAEVVVG*DHAIAL Trigger: GAGTGCAATGGCATGATCTCAGCCCACCACGACCTC...AGCATCTTTCCACCCCAGCCTTCTGAGTAGCTGGGAACACAGGAGCGTACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR GCA 90 bp | AGTGGTACGCTCCTGTGTTCCCAGCTACTCAGAAGGCTGGGGTGGAAAGATGCTCAGGGAGGTCAAGGCTaGAGTGAGCCAAGATCATAC | + |
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Preference number: 4 (lower is better) Translates to: SGTLLCSQLLRRLGWKDAQGGQG*SEPRSY Trigger: GTATGATCTTGGCTCACTGCAGCCTTGACCTCCCTG...AGCATCTTTCCACCCCAGCCTTCTGAGTAGCTGGGAACACAGGAGCGTACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR TCA 90 bp | AGTGGTACGCTCCTGTGTTCCCAGCTACTCAGAAGGCTGGGGTGGAAAGATGCTAGTTCAAGACTAGCCTaGCAAACATGGAGAAACCCC | + |
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Preference number: 4 (lower is better) Translates to: SGTLLCSQLLRRLGWKDASSRLA*QTWRNP Trigger: GGGGTTTCTCCATGTTTGTCAGGCTAGTCTTGAACT...AGCATCTTTCCACCCCAGCCTTCTGAGTAGCTGGGAACACAGGAGCGTACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR TCA 90 bp | CTTACAAAATGCAACAGACTGCTAGGCACACTTAATGTAACGTGGAAGTATGTTGTAATCCAAGCACTTTaGGAGGCCCAGGCGGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LTKCNRLLGTLNVTWKYVVIQAL*EAQAGG Trigger: TCCGCCCGCCTGGGCCTCTCAAAGTGCTTGGATTAC...AACATACTTCCACGTTACATTAAGTGTGCCTAGCAGTCTGTTGCATTTTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR CCA 90 bp | CTTACAAAATGCAACAGACTGCTAGGCACACTTAATGTAACGTGGAAGTATGTTATTCTGACCAGTGGCTaGTCATTACATGCAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTKCNRLLGTLNVTWKYVILTSG*SLHAVA Trigger: AGCCACTGCATGTAATGACCAGCCACTGGTCAGAAT...AACATACTTCCACGTTACATTAAGTGTGCCTAGCAGTCTGTTGCATTTTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS CCA 90 bp | GACATTACGTGGCTTTGGTCACCACGGACAAACGCTGGACGTTACTaGTCCCTTATCTCTCTCCACCCCGCTGGGTCGCCTCTCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: DITWLWSPRTNAGRY*SLISLHPAGSPLPT Trigger: TGTGGGGAGAGGCGACCCAGCGGGGTGGAGAGAGATAAGGGACCAGTAACGTCCAGCGTTTGTCCGTGGTGACCAAAGCCACGTAATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGCTGAAGCAGAATCACTaGAACCTGGGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PVIPALLGQDGQIAPRSPLKQNH*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTGCTTCAG...CGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR CAA 90 bp | CCTGTAATCCCAGCACTGTTAGGCCAAGATGGGCAGATTGCTCCCAGGAGTCCGTCTAAAACAGTGAGCTaGCTAAGCACAGTGGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: PVIPALLGQDGQIAPRSPSKTVS*LSTVAH Trigger: GTGAGCCACTGTGCTTAGCAAGCTCACTGTTTTAGA...CGGACTCCTGGGAGCAATCTGCCCATCTTGGCCTAACAGTGCTGGGATTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS-3UTR CAA 90 bp | CTTACAAAATGCAACAGACTGCTAGGCACACTTAATGTAACGTGGAAGTATGTTTGTAATCCAAGCACTTaGAGAGGCCCAGGCGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LTKCNRLLGTLNVTWKYVCNPST*RGPGGR Trigger: CCGCCCGCCTGGGCCTCTCAAAGTGCTTGGATTACA...AACATACTTCCACGTTACATTAAGTGTGCCTAGCAGTCTGTTGCATTTTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285298.9 |
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| CDS GCA 72 bp | ACGAAGCGATTCGCTCTCAGGGCTCTCACGCGAGGGTaGCTTGGGTCCCCAGCAAATCCTCCCCCGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TKRFALRALTRG*LGSPANPPPAA Trigger: TGCTGCCGGGGGAGGATTTGCTGGGGACCCAAGGCACCCTCGCGTGAGAGCCCTGAGAGCGAATCGCTTCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS CCA 72 bp | GCGATTCGCTCTCAGGGCTCTCACGCGAGGGTGCCTTaGGTCCCCAGCAAATCCTCCCCCGGCAGCAATACC | + |
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Preference number: 6 (lower is better) Translates to: AIRSQGSHARVP*VPSKSSPGSNT Trigger: GGTATTGCTGCCGGGGGAGGATTTGCTGGGGACCCAAGGCACCCTCGCGTGAGAGCCCTGAGAGCGAATCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS CAA 72 bp | AGCGATTCGCTCTCAGGGCTCTCACGCGAGGGTGCCTaGGGTCCCCAGCAAATCCTCCCCCGGCAGCAATAC | + |
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Preference number: 6 (lower is better) Translates to: SDSLSGLSREGA*GPQQILPRQQY Trigger: GTATTGCTGCCGGGGGAGGATTTGCTGGGGACCCAAGGCACCCTCGCGTGAGAGCCCTGAGAGCGAATCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS TCA 72 bp | CTCCCCGGCCCAGCGACGGATGACTTGGGCTGCTTTTaGGATCAGTTCACAAGCCATTCCACCAGGCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPGPATDDLGCF*DQFTSHSTRLR Trigger: CCGAAGCCTGGTGGAATGGCTTGTGAACTGATCTCAAAAGCAGCCCAAGTCATCCGTCGCTGGGCCGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS CCA 72 bp | CAGTTCACAAGCCATTCCACCAGGCTTCGGAAAGGTTaGGGTGATTCGTGCCCTCGCCCCAGACAACCCCGA | + |
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Preference number: 6 (lower is better) Translates to: QFTSHSTRLRKG*GDSCPRPRQPR Trigger: TCGGGGTTGTCTGGGGCGAGGGCACGAATCACCCCAACCTTTCCGAAGCCTGGTGGAATGGCTTGTGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS CCA 72 bp | TGGCTTTGGTCACCACGGACAAACGCTGGACGTTACTaGTCCCTTATCTCTCTCCACCCCGCTGGGTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: WLWSPRTNAGRY*SLISLHPAGSP Trigger: AGGCGACCCAGCGGGGTGGAGAGAGATAAGGGACCAGTAACGTCCAGCGTTTGTCCGTGGTGACCAAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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| CDS CCA 72 bp | GGACATTACGTGGCTTTGGTCACCACGGACAAACGCTaGACGTTACTGGTCCCTTATCTCTCTCCACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GHYVALVTTDKR*TLLVPYLSPPR Trigger: GCGGGGTGGAGAGAGATAAGGGACCAGTAACGTCCAGCGTTTGTCCGTGGTGACCAAAGCCACGTAATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443449.1 |
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