Pregenerated sensors for MRPS16 (Homo sapiens)
Ensembl gene IDs: ENSG00000182180Ensembl transcript IDs: ENST00000372940.3, ENST00000372945.8, ENST00000471251.5, ENST00000473427.1, ENST00000479005.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCCGAGGTGGGCAGATCACAAGGTCAGATTGAGACCATCCTGGCCAACACGGTGAAAAATACAAAAATTTaGCCGGGCGGTGGCTCACGC | + |
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Preference number: 2 (lower is better) Translates to: AEVGRSQGQIETILANTVKNTKI*PGGGSR Trigger: GCGTGAGCCACCGCCCGGGCAAATTTTTGTATTTTT...CACCGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | ACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATGGTGCCGCCGGCGTaGGGCTCCTCGGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TVVEQSQFTAASASWAQVMVPPA*GSSESP Trigger: GGGGCTCTCCGAGGAGCCGCACGCCGGCGGCACCAT...CACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | ACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCTTACTGCCATGGTGCCGCCGGCGTaGGGCTCCTCGGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TITVHCSIGLLGSSDLTAMVPPA*GSSESP Trigger: GGGGCTCTCCGAGGAGCCGCACGCCGGCGGCACCAT...GGCAGTAAGATCACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCCGAGATCGCGCCACTaGACTCAAGCCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: GWTVVEQSQFTAASASWAPRSRH*TQAWAT Trigger: TGTCGCCCAGGCTTGAGTGCAGTGGCGCGATCTCGG...AGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | GCCGAGGTGGGCAGATCACAAGGTCAGATTGAGACCATCCTGGCCAACACGGTGCCAGGAGACAGAGCTTaGAGTGAGCCGAGATCGCGC | + |
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Preference number: 4 (lower is better) Translates to: AEVGRSQGQIETILANTVPGDRA*SEPRSR Trigger: GCGCGATCTCGGCTCACTGCAAGCTCTGTCTCCTGG...CACCGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCCAGCTAATTGACTCCGGAAGCGGATaGTCCGCTCGCCACGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SASRVAGTMGEQHHSQLIDSGSG*SARHAS Trigger: GGAGGCGTGGCGAGCGGATCATCCGCTTCCGGAGTC...AATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGAGCTGGGTGTGGTGGTaGATGCTTGTAGCTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGWTVVEQSQFTAASASWSWVWW*MLVAPR Trigger: CCGGGGAGCTACAAGCATGCACCACCACACCCAGCT...CCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR CCA 90 bp | GCCGAGGTGGGCAGATCACAAGGTCAGATTGAGACCATCCTGGCCAACACGGTGCACCGCACTCCAGCCTaGCAACAGAACAAGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: AEVGRSQGQIETILANTVHRTPA*QQNKTP Trigger: CGGAGTCTTGTTCTGTTGCCAGGCTGGAGTGCGGTG...CACCGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | ACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCTTACTGCCAGACAGAGCTTGCAGTaGGCCGAGATCGCGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: TITVHCSIGLLGSSDLTARQSLQ*AEIAPL Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGTCT...GGCAGTAAGATCACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGCCTCCTGGGCTCAAGTaGTCTTACTGCCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGWTVVEQSQFTAASASWPPGLK*SYCLSF Trigger: GAAGCTGAGGCAGTAAGATCACTTGAGCCCAGGAGG...CCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTAACACAGAAAGAACCTaGAAGCCGACACCAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GWTVVEQSQFTAASASWANTERT*KPTPGR Trigger: GCGGCCTGGTGTCGGCTTGCAGGTTCTTTCTGTGTT...AGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | GATCTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACCACGCCTCCTCCGCTTaGCGCCCTATACTTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: DLTASASRVAGTMGEQHHHASSA*RPILPT Trigger: TGTGGGAAGTATAGGGCGGCAAGCGGAGGAGGCGTG...GTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGAACTCTGGCTTCAAGTaGTCCTTCCACCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGWTVVEQSQFTAASASWNSGFK*SFHLSL Trigger: GAGGCTGAGGTGGAAGGATCACTTGAAGCCAGAGTT...CCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTGCTGAAGCAGGAGAATaGCATGAACCCAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GWTVVEQSQFTAASASWAAEAGE*HEPRRQ Trigger: CTGTCTCCTGGGTTCATGCCATTCTCCTGCTTCAGC...AGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTGGATCCTGTCTAGGTTaGGGGCAACGAGTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GWTVVEQSQFTAASASWAGSCLG*GQRVFL Trigger: GAGAAAAACTCGTTGCCCTCAACCTAGACAGGATCC...AGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCAGCAGGAGAATGGCATaGACCCAGGAGACAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LTASASRVAGTMGEQHHSSRRMA*TQETEL Trigger: AAGCTCTGTCTCCTGGGTTCATGCCATTCTCCTGCT...GCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | ACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGAACACAGAAAGAACCTaGAAGCCGACACCAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVEQSQFTAASASWAQVNTERT*KPTPGR Trigger: GCGGCCTGGTGTCGGCTTGCAGGTTCTTTCTGTGTT...CACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | CTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCGGATCCTGTCTAGGTTaGGGGCAACGAGTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LTASASRVAGTMGEQHHSGSCLG*GQRVFL Trigger: GAGAAAAACTCGTTGCCCTCAACCTAGACAGGATCC...GCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCCAGCTAATTGGCAGGAGAACCTCTTaGACCCAGGAGGTGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: SASRVAGTMGEQHHSQLIGRRTS*TQEVEI Trigger: AATCTCCACCTCCTGGGTTCAAGAGGTTCTCCTGCC...AATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | ACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCTTACTGCCAACTCTGGCTTCAAGTaGTCCTTCCACCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TITVHCSIGLLGSSDLTANSGFK*SFHLSL Trigger: GAGGCTGAGGTGGAAGGATCACTTGAAGCCAGAGTT...GGCAGTAAGATCACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | TGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGGGGTCTTGCTGTGTTaGACAGGCTGGTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: WTVVEQSQFTAASASWAQGVLLC*TGWSQT Trigger: AGTTTGAGACCAGCCTGTGCAACACAGCAAGACCCC...TTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR GCA 90 bp | ACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGGGGGTCTTGCTGTGTTaGACAGGCTGGTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: TVVEQSQFTAASASWAQVGVLLC*TGWSQT Trigger: AGTTTGAGACCAGCCTGTGCAACACAGCAAGACCCC...CACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | ACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCACAAGGTCAGATTaGGACCATCCTGGCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: TVVEQSQFTAASASWAQVITRSD*DHPGQH Trigger: GTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGAT...CACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR CCA 90 bp | GATCTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACGCTGGTCTCAAACTCTaGCTTCAAGTGATCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: DLTASASRVAGTMGEQHHAGLKL*LQVILP Trigger: TGGAAGGATCACTTGAAGCCAGAGTTTGAGACCAGC...GTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR TCA 90 bp | ACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCTTACTGCCACACATGGGAATACTTaGGACCCAGAAGCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TITVHCSIGLLGSSDLTATHGNT*DPEAFP Trigger: TGGAAAAGCTTCTGGGTCTCAAGTATTCCCATGTGT...GGCAGTAAGATCACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS-3UTR CCA 90 bp | TGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGAGCCACTGCCCCAATaGTATCTTTATATTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: WTVVEQSQFTAASASWAQEPLPQ*YLYIIF Trigger: AAAAATAATATAAAGATACCATTGGGGCAGTGGCTC...TTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CCA 90 bp | TCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCCAGCTAATTGAGCCACTGCCCCAATaGTATCTTTATATTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: SASRVAGTMGEQHHSQLIEPLPQ*YLYIIF Trigger: AAAAATAATATAAAGATACCATTGGGGCAGTGGCTC...AATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS TCA 90 bp | ACCGCCAAGCGGTACAAGCCCGAAAACCTCGACTCCGGAAGCGGATaGTCCGCTCGCCACGCCTCCTCCGCTTGCCGCCCTATACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: TAKRYKPENLDSGSG*SARHASSACRPILP Trigger: GGGAAGTATAGGGCGGCAAGCGGAGGAGGCGTGGCGAGCGGATCATCCGCTTCCGGAGTCGAGGTTTTCGGGCTTGTACCGCTTGGCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS GCA 90 bp | AGCTCTACGGCCTTGGCAGGGCAGAGAACAAACACAGAAAGAACCTaGAAGCCGACACCAGGCCGCACCGCCAAGCGGTACAAGCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SSTALAGQRTNTERT*KPTPGRTAKRYKPE Trigger: TTCGGGCTTGTACCGCTTGGCGGTGCGGCCTGGTGTCGGCTTGCAGGTTCTTTCTGTGTTTGTTCTCTGCCCTGCCAAGGCCGTAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000372940.3 ENST00000372945.8 ENST00000473427.1 ENST00000479005.1 |
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| CDS-3UTR CAA 90 bp | TGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAACCACGCCTCCTCCGCTaGCCGCCCTATACTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: WTVVEQSQFTAASASWAQPRLLR*PPYTSH Trigger: GTGGGAAGTATAGGGCGGCAAGCGGAGGAGGCGTGG...TTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS-3UTR CAA 90 bp | CTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAGCACCAGCTCTACGGCCTaGGCAGGGCAGAGAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: LTASASRVAGTMGEQHHSTSSTA*AGQRTN Trigger: GTTTGTTCTCTGCCCTGCCAAGGCCGTAGAGCTGGT...GCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CAA 90 bp | ACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAAGTGATCTTACTGCCACCAGCTCTACGGCCTaGGCAGGGCAGAGAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: TITVHCSIGLLGSSDLTATSSTA*AGQRTN Trigger: GTTTGTTCTCTGCCCTGCCAAGGCCGTAGAGCTGGT...GGCAGTAAGATCACTTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CAA 90 bp | GATCTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACCGGATCCTGTCTAGGTaGAGGGCAACGAGTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DLTASASRVAGTMGEQHHRILSR*RATSFS Trigger: AGAAAAACTCGTTGCCCTCAACCTAGACAGGATCCG...GTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CAA 90 bp | TGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGGCTCAACGGATCCTGTCTAGGTaGAGGGCAACGAGTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: WTVVEQSQFTAASASWAQRILSR*RATSFS Trigger: AGAAAAACTCGTTGCCCTCAACCTAGACAGGATCCG...TTGAGCCCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372940.3 ENST00000372945.8 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGGACTGTAGTGGAACAATCACAGTTCACTGCAGCATCGGCCTCCTGGAACACATGGGAATACTaGAGACCTAAGAATGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: PGWTVVEQSQFTAASASWNTWEY*RPKNGC Trigger: ACAACCATTCTTAGGTCTCAAGTATTCCCATGTGTT...CCAGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372945.8 |
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| CDS-3UTR CAA 90 bp | GATCTTACTGCCTCAGCTTCCCGAGTAGCTGGAACTATGGGTGAGCAACACCACAACACATGGGAATACTaGAGACCCAGAAGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: DLTASASRVAGTMGEQHHNTWEY*RPRSFS Trigger: GGAAAAGCTTCTGGGTCTCAAGTATTCCCATGTGTT...GTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS TCA 72 bp | CGGTACAAGCCCGAAAACCTCGACTCCGGAAGCGGATaGTCCGCTCGCCACGCCTCCTCCGCTTGCCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RYKPENLDSGSG*SARHASSACRP Trigger: AGGGCGGCAAGCGGAGGAGGCGTGGCGAGCGGATCATCCGCTTCCGGAGTCGAGGTTTTCGGGCTTGTACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372940.3 |
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| CDS CAA 90 bp | GCTCCTCGGAGAGCCCCGCTACCCGCACGCACCAGCTCTACGGCCTaGGCAGGGCAGAGAACAAACACAGAAAGAACCTGCAAGCCGACA | + |
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Preference number: 6 (lower is better) Translates to: APRRAPLPARTSSTA*AGQRTNTERTCKPT Trigger: TGTCGGCTTGCAGGTTCTTTCTGTGTTTGTTCTCTGCCCTGCCAAGGCCGTAGAGCTGGTGCGTGCGGGTAGCGGGGCTCTCCGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372940.3 ENST00000372945.8 ENST00000479005.1 |
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| CDS CAA 72 bp | AGAGCCCCGCTACCCGCACGCACCAGCTCTACGGCCTaGGCAGGGCAGAGAACAAACACAGAAAGAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: RAPLPARTSSTA*AGQRTNTERTC Trigger: GCAGGTTCTTTCTGTGTTTGTTCTCTGCCCTGCCAAGGCCGTAGAGCTGGTGCGTGCGGGTAGCGGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372940.3 ENST00000372945.8 ENST00000479005.1 |
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| CDS GCA 72 bp | AAACTGAGAGAAGGATCAAATGTAAGGCAGTGTGGCTaGTTCAGGTTCGGGTTGCCTCCATCGCGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KLREGSNVRQCG*FRFGLPPSRLG Trigger: TCCCAGGCGCGATGGAGGCAACCCGAACCTGAAGCAGCCACACTGCCTTACATTTGATCCTTCTCTCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471251.5 |
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