Pregenerated sensors for MRPS15 (Homo sapiens)
Ensembl gene IDs: ENSG00000116898Ensembl transcript IDs: ENST00000373116.6, ENST00000462067.1, ENST00000477040.1, ENST00000488606.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAACGACCCTCAGCATGGTaGCCTCTAACCCCCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: SGQKEPHHLSYHSSRQKERPSAW*PLTPAG Trigger: CCCCGCGGGGGTTAGAGGTCACCATGCTGAGGGTCG...TTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGACGGACCGGGTTACATaGGCGCCGCCATGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMTDRVT*APPCWP Trigger: GGGCCAGCATGGCGGCGCCCATGTAACCCGGTCCGT...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGTGGGCGCCGCCATGCTaGCCCAGGATCGACCAATCG | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMWAPPC*PRIDQS Trigger: CGATTGGTCGATCCTGGGCCAGCATGGCGGCGCCCA...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGTATCCGCGCGCGGCCTaGAGGAGGAGACTTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMYPRAA*RRRLRG Trigger: GCCTCGAAGTCTCCTCCTCCAGGCCGCGCGCGGATA...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGACATGGGCGCCGCCATaGTGGCCCAGGATCGACCAA | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMTWAPP*WPRIDQ Trigger: TTGGTCGATCCTGGGCCAGCATGGCGGCGCCCATGT...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | AGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGGCCGCCGTTCGCTTTaGGGCACGGACCGGGTTACA | + |
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Preference number: 4 (lower is better) Translates to: RPKRAPSSLLSFFKTERNGRRSL*GTDRVT Trigger: TGTAACCCGGTCCGTGCCGCAAAGCGAACGGCGGCC...ATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAACCGGGTACTAGGACCTaGGTAACTGCCCGGGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: QAKKSPIISPIILQDRKKPGTRT*VTARVR Trigger: TCGGACCCGGGCAGTTACCCAGGTCCTAGTACCCGG...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR TCA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAAGCAGGCCCCACTGGTTaGAAGGAAACTTGGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QAKKSPIISPIILQDRKKAGPTG*KETWRS Trigger: GGAGCGCCAAGTTTCCTTTCAACCAGTGGGGCCTGC...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAAGGCTGCAGGCCCCACTaGTTGAAAGGAAACTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QAKKSPIISPIILQDRKKGCRPH*LKGNLA Trigger: CGCCAAGTTTCCTTTCAACCAGTGGGGCCTGCAGCC...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | TCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAAGGAGACTTCGAGGCTaGAGGCCCCACTGGTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: SGQKEPHHLSYHSSRQKERRLRG*RPHWLK Trigger: TTTCAACCAGTGGGGCCTGCAGCCTCGAAGTCTCCT...TTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGCAGCCTAGACTGGGCTaGTTTCCGGACGACATATCC | + |
|
Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMQPRLG*FPDDIS Trigger: GGATATGTCGTCCGGAAACCAGCCCAGTCTAGGCTG...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | TCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAATCATCCAGCCTAGACTaGGCTGGTTTCCGGACGACA | + |
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Preference number: 4 (lower is better) Translates to: SGQKEPHHLSYHSSRQKESSSLD*AGFRTT Trigger: TGTCGTCCGGAAACCAGCCCAGTCTAGGCTGGATGA...TTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAACAGCGTAGAGGGAGGTaGGTCATCATCCAGCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: QAKKSPIISPIILQDRKKQRRGR*VIIQPR Trigger: TCTAGGCTGGATGATGACCCACCTCCCTCTACGCTG...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGTGGGTTCCTCCGCTTTaGTTGTTTTTGGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMWVPPL*LFLGCC Trigger: GCAGCAGCCCAAAAACAAGCAAAGCGGAGGAACCCA...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | AGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATTTTGGCAGGGCTGTCTaGGTTCCTCCGCTTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RPKRAPSSLLSFFKTERNFGRAV*VPPLCL Trigger: CAAGCAAAGCGGAGGAACCCAGACAGCCCTGCCAAA...ATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATCTTTGGTATGGCTTTaGCAGGGCTGTCTGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QAKKSPIISPIILQDRKKSLVWL*QGCLGS Trigger: GGAACCCAGACAGCCCTGCCAAAGCCATACCAAAGA...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CCA 90 bp | TCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAGTCTTTGAGTGTCTTTaGTATGGCTTTGGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGQKEPHHLSYHSSRQKEVFECL*YGFGRA Trigger: AGCCCTGCCAAAGCCATACCAAAGACACTCAAAGAC...TTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR TCA 90 bp | TTCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGATTTATTGGCTGTCTTTaGGTGTCTTTGGTATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FRPKRAPSSLLSFFKTERFIGCL*VSLVWL Trigger: AAGCCATACCAAAGACACTCAAAGACAGCCAATAAA...TCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGGGTGTCCTCTGGGTTTaGAACAATCTTCTTCATAAA | + |
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Preference number: 4 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMGVLWV*NNLLHK Trigger: TTTATGAAGAAGATTGTTGCAAACCCAGAGGACACC...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR GCA 90 bp | AGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATTTTTCCTCTGGTCAATaGTCATTAGCAGATAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: RPKRAPSSLLSFFKTERNFSSGQ*SLADSV Trigger: AACGCTATCTGCTAATGAGCATTGACCAGAGGAAAA...ATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS TCA 90 bp | GGGTCCGAATCAAACTCAGCGTCCTCCACGCGACCCTCAGCATGGTaGCCTCTAACCCCCGCGGGGCCCGCGCCGCGGCCGCCGTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: GSESNSASSTRPSAW*PLTPAGPAPRPPFA Trigger: AGCGAACGGCGGCCGCGGCGCGGGCCCCGCGGGGGTTAGAGGTCACCATGCTGAGGGTCGCGTGGAGGACGCTGAGTTTGATTCGGACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS CCA 90 bp | GGAAACTTGGCGCTCCCACCGCCCGGCAGCCCGGGTACTAGGACCTaGGTAACTGCCCGGGTCCGAATCAAACTCAGCGTCCTCCACGCG | + |
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Preference number: 5 (lower is better) Translates to: GNLALPPPGSPGTRT*VTARVRIKLSVLHA Trigger: CGCGTGGAGGACGCTGAGTTTGATTCGGACCCGGGCAGTTACCCAGGTCCTAGTACCCGGGCTGCCGGGCGGTGGGAGCGCCAAGTTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS GCA 90 bp | CACGACAGCAGGCCCTTCCCAGTACATACTGAGTTCTGGGAGCACTaGAGAAAGTGCAGTGGGAACCCTGACCCCGACCACATGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HDSRPFPVHTEFWEH*RKCSGNPDPDHMAP Trigger: TGGAGCCATGTGGTCGGGGTCAGGGTTCCCACTGCACTTTCTGCAGTGCTCCCAGAACTCAGTATGTACTGGGAAGGGCCTGCTGTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS CCA 90 bp | AGAGGCTGTCACGACAGCAGGCCCTTCCCAGTACATACTGAGTTCTaGGAGCACTGCAGAAAGTGCAGTGGGAACCCTGACCCCGACCAC | + |
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Preference number: 5 (lower is better) Translates to: RGCHDSRPFPVHTEF*EHCRKCSGNPDPDH Trigger: GTGGTCGGGGTCAGGGTTCCCACTGCACTTTCTGCAGTGCTCCCAGAACTCAGTATGTACTGGGAAGGGCCTGCTGTCGTGACAGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS-3UTR CAA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGCGGCCGCCGTTCGCTTaGCGGCACGGACCGGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMRPPFA*RHGPGY Trigger: GTAACCCGGTCCGTGCCGCAAAGCGAACGGCGGCCG...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS GCA 90 bp | AAGACGACCCCAGTAACCACCTTGCCAGTCCAGGCCATTTGTTCCTaGCAACCTGGGGATTTCAGTAGTGATAATGCAGAAACAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: KTTPVTTLPVQAICS*QPGDFSSDNAETGE Trigger: CTCACCTGTTTCTGCATTATCACTACTGAAATCCCCAGGTTGGCAGGAACAAATGGCCTGGACTGGCAAGGTGGTTACTGGGGTCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS-3UTR CAA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGGTTGAAAGGAAACTaGGCGCTCCCACCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QAKKSPIISPIILQDRKKWLKGN*ALPPPG Trigger: GCCGGGCGGTGGGAGCGCCAAGTTTCCTTTCAACCA...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | CAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGCAGGCCCCACTGGTaGAAAGGAAACTTGGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: QAKKSPIISPIILQDRKKCRPHW*KGNLAL Trigger: GAGCGCCAAGTTTCCTTTCAACCAGTGGGGCCTGCA...TTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | GGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGATGCACAGAGCCTTCTaGGTCACGAATCGGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GQKEPHHLSYHSSRQKEMMHRAF*VTNRRW Trigger: CCACCGCCGATTCGTGACCAAGAAGGCTCTGTGCAT...CATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | TTCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGACCGCTTTGCTTGTTTTaGGGCTGCTGCTGCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: FRPKRAPSSLLSFFKTERPLCLF*GCCCSL Trigger: AAGGCTGCAGCAGCAGCCCAAAAACAAGCAAAGCGG...TCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | TTCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAGTTCCTCCGCTTTGCTaGTTTTTGGGCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: FRPKRAPSSLLSFFKTERVPPLC*FLGCCC Trigger: GCAGCAGCAGCCCAAAAACAAGCAAAGCGGAGGAAC...TCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | TTCAGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGACTGGGTTCCTCCGCTTaGCTTGTTTTTGGGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FRPKRAPSSLLSFFKTERLGSSA*LVFGLL Trigger: CAGCAGCCCAAAAACAAGCAAAGCGGAGGAACCCAG...TCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS TCA 90 bp | CAAGTGTTCTTCATAACTGCGGATCTTGACAGACAAGGCAATAACTaGAACCACAAACCACAGAGGATGAGAGTTGGGCACAGAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QVFFITADLDRQGNN*NHKPQRMRVGHRGR Trigger: CCTTCCTCTGTGCCCAACTCTCATCCTCTGTGGTTTGTGGTTTCAGTTATTGCCTTGTCTGTCAAGATCCGCAGTTATGAAGAACACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS-3UTR CAA 90 bp | AGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATGTCTTTGGTATGGCTTaGGCAGGGCTGTCTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: RPKRAPSSLLSFFKTERNVFGMA*AGLSGF Trigger: GAACCCAGACAGCCCTGCCAAAGCCATACCAAAGAC...ATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS-3UTR CAA 90 bp | AGGCCAAAAAGAGCCCCATCATCTCTCCTATCATTCTTCAAGACAGAAAGAAATATTTATTGGCTGTCTTaGAGTGTCTTTGGTATGGCT | + |
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Preference number: 5 (lower is better) Translates to: RPKRAPSSLLSFFKTERNIYWLS*SVFGMA Trigger: AGCCATACCAAAGACACTCAAAGACAGCCAATAAAT...ATTTCTTTCTGTCTTGAAGAATGATAGGAGAGATGATGGGGCTCTTTTTGGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS CCA 72 bp | GGCCGCCGTTCGCTTTGCGGCACGGACCGGGTTACATaGGCGCCGCCATGCTGGCCCAGGATCGACCAATCG | + |
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Preference number: 6 (lower is better) Translates to: GRRSLCGTDRVT*APPCWPRIDQS Trigger: CGATTGGTCGATCCTGGGCCAGCATGGCGGCGCCCATGTAACCCGGTCCGTGCCGCAAAGCGAACGGCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS CCA 72 bp | GCGCTCCCACCGCCCGGCAGCCCGGGTACTAGGACCTaGGTAACTGCCCGGGTCCGAATCAAACTCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: ALPPPGSPGTRT*VTARVRIKLSV Trigger: GACGCTGAGTTTGATTCGGACCCGGGCAGTTACCCAGGTCCTAGTACCCGGGCTGCCGGGCGGTGGGAGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373116.6 |
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| CDS GCA 72 bp | AGGCCCTTCCCAGTACATACTGAGTTCTGGGAGCACTaGAGAAAGTGCAGTGGGAACCCTGACCCCGACCAC | + |
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Preference number: 6 (lower is better) Translates to: RPFPVHTEFWEH*RKCSGNPDPDH Trigger: GTGGTCGGGGTCAGGGTTCCCACTGCACTTTCTGCAGTGCTCCCAGAACTCAGTATGTACTGGGAAGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS TCA 72 bp | TTGCTGGAGCCCCAGAAGTTGCGCTGTAGTGAGCCATaGTCACACCTGCCACTGACTGCATTCCAGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLEPQKLRCSEP*SHLPLTAFQPE Trigger: CTCAGGCTGGAATGCAGTCAGTGGCAGGTGTGATCATGGCTCACTACAGCGCAACTTCTGGGGCTCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS TCA 72 bp | GTTGTGCATGCCTTTGGTCCCAGCTACTTGGGAGCCTaGGGTAGGAGAATTGCTGGAGCCCCAGAAGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: VVHAFGPSYLGA*GRRIAGAPEVA Trigger: CGCAACTTCTGGGGCTCCAGCAATTCTCCTACCTCAGGCTCCCAAGTAGCTGGGACCAAAGGCATGCACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS TCA 72 bp | AGGCTGTCACGACAGCAGGCCCTTCCCAGTACATACTaGGTTCTGGGAGCACTGCAGAAAGTGCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RLSRQQALPSTY*VLGALQKVQWE Trigger: TTCCCACTGCACTTTCTGCAGTGCTCCCAGAACTCAGTATGTACTGGGAAGGGCCTGCTGTCGTGACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS CCA 72 bp | GCAGAAAGTGCAGTGGGAACCCTGACCCCGACCACATaGCTCCATCACAGCAACTTAGGTGTAGAGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: AESAVGTLTPTT*LHHSNLGVEWN Trigger: GTTCCACTCTACACCTAAGTTGCTGTGATGGAGCCATGTGGTCGGGGTCAGGGTTCCCACTGCACTTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS CCA 72 bp | TTGACATGGTTGTGCATGCCTTTGGTCCCAGCTACTTaGGAGCCTGAGGTAGGAGAATTGCTGGAGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTWLCMPLVPAT*EPEVGELLEPQ Trigger: CTGGGGCTCCAGCAATTCTCCTACCTCAGGCTCCCAAGTAGCTGGGACCAAAGGCATGCACAACCATGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS CAA 72 bp | CAAAACTTGTGCTTAAAGACGACCCCAGTAACCACCTaGCCAGTCCAGGCCATTTGTTCCTGCCAACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QNLCLKTTPVTT*PVQAICSCQPG Trigger: CCCAGGTTGGCAGGAACAAATGGCCTGGACTGGCAAGGTGGTTACTGGGGTCGTCTTTAAGCACAAGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS GCA 72 bp | CCAGTAACCACCTTGCCAGTCCAGGCCATTTGTTCCTaGCAACCTGGGGATTTCAGTAGTGATAATGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PVTTLPVQAICS*QPGDFSSDNAE Trigger: TTCTGCATTATCACTACTGAAATCCCCAGGTTGGCAGGAACAAATGGCCTGGACTGGCAAGGTGGTTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS CAA 72 bp | ATTTATTGGCTGTCTTTGAGTGTCTTTGGTATGGCTTaGGCAGGGCTGTCTGGGTTCCTCCGCTTTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: IYWLSLSVFGMA*AGLSGFLRFAC Trigger: ACAAGCAAAGCGGAGGAACCCAGACAGCCCTGCCAAAGCCATACCAAAGACACTCAAAGACAGCCAATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373116.6 ENST00000462067.1 ENST00000477040.1 ENST00000488606.5 |
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| CDS CAA 90 bp | TTGAACAGAATTTATTGGCTGTCTTTGAGTGTCTTTGGTATGGCTTaGGCAGGGCTGTCTGGGTTCCTCCGCTTTGCTTGTTTTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LNRIYWLSLSVFGMA*AGLSGFLRFACFWA Trigger: AGCCCAAAAACAAGCAAAGCGGAGGAACCCAGACAGCCCTGCCAAAGCCATACCAAAGACACTCAAAGACAGCCAATAAATTCTGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000373116.6 ENST00000462067.1 ENST00000477040.1 ENST00000488606.5 |
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| CDS TCA 72 bp | TTCATAACTGCGGATCTTGACAGACAAGGCAATAACTaGAACCACAAACCACAGAGGATGAGAGTTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FITADLDRQGNN*NHKPQRMRVGH Trigger: GTGCCCAACTCTCATCCTCTGTGGTTTGTGGTTTCAGTTATTGCCTTGTCTGTCAAGATCCGCAGTTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS GCA 72 bp | TCTACCAAAAACACAAAAATTAGCTTGACATGGTTGTaGATGCCTTTGGTCCCAGCTACTTGGGAGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: STKNTKISLTWL*MPLVPATWEPE Trigger: CTCAGGCTCCCAAGTAGCTGGGACCAAAGGCATGCACAACCATGTCAAGCTAATTTTTGTGTTTTTGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000488606.5 |
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| CDS CAA 72 bp | TCAAGAACCCAGGATATCGTTCATTCAGGCATCCTCTaGTTTAATTTACCCCCTGTACTGCAAAGATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRTQDIVHSGIL*FNLPPVLQRWG Trigger: CCCCCATCTTTGCAGTACAGGGGGTAAATTAAACAAGAGGATGCCTGAATGAACGATATCCTGGGTTCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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| CDS CCA 72 bp | TCAATTCAGGAATTAGACCAGGATACAGTGCTATCATaGTTAACAATTCAACATTGTATTAGAGGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SIQELDQDTVLS*LTIQHCIRGPS Trigger: GCTTGGACCTCTAATACAATGTTGAATTGTTAACCATGATAGCACTGTATCCTGGTCTAATTCCTGAATTGA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462067.1 ENST00000488606.5 |
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