Pregenerated sensors for MRPL54 (Homo sapiens)
Ensembl gene IDs: ENSG00000183617Ensembl transcript IDs: ENST00000330133.5, ENST00000589174.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCGCCCCGCCCATCCAGCTTGTGGACAGAGGAAGCCGGAGGGTGGGTGAGCCCACAGCCTCCTCTAATCTaGTGGACTCCAGCCCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: PPRPSSLWTEEAGGWVSPQPPLI*WTPALV Trigger: CACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTG...TGGGCTCACCCACCCTCCGGCTTCCTCTGTCCACAAGCTGGATGGGCGGGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGTGGACAGAGGAAGCCGGAGGGTGGGTGAGCCCAGTCCAAATCCCCCAGCCTCCTCTAATCTGGTaGACTCCAGCCCTCGTGATC | + |
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Preference number: 2 (lower is better) Translates to: SLWTEEAGGWVSPVQIPQPPLIW*TPALVI Trigger: GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGG...CTGGGGGATTTGGACTGGGCTCACCCACCCTCCGGCTTCCTCTGTCCACAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | CCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCGGCAAGCCCTCGGCGTaGGGGTCAGCGATGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPGKRQALGVGVSDAGPSGKPSA*GSAMPG Trigger: GCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCC...GGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCGGTCCAGCCCCACTGTaGGGTCACATGGAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: HVLRENGKPSAWGSAMPGGPAPL*GHMETQ Trigger: CTGGGTTTCCATGTGACCCCACAGTGGGGCTGGACC...GCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR TCA 90 bp | ACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCCATGGCATATGTGGTaGGCTGGACAGGATCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSSGKTASPRRGGQRCRAPWHMW*AGQDLC Trigger: GCACAGATCCTGTCCAGCTCACCACATATGCCATGG...GGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR TCA 90 bp | GGTGAGCCCAGTCCAAATCCCCCAGGGCACCCACCTAGGCATGGGTGGGGCTGCAGGACGTGGGGTCCATaGGGTGATCTACCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GEPSPNPPGHPPRHGWGCRTWGP*GDLPPA Trigger: TGCTGGGGGTAGATCACCTCATGGACCCCACGTCCT...GCAGCCCCACCCATGCCTAGGTGGGTGCCCTGGGGGATTTGGACTGGGCTCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR GCA 90 bp | CCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCATGCCGGGCCCTCCATaGTACAACCTCTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PPGKRQALGVGVSDAGPSMPGPP*YNLLFL Trigger: CAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCAT...GGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CCGCCCATCCAGCTTGTGGACAGAGGAAGCCGGAGGGTGGGTGAGCCCAGTCCACGCCCATCCAGCTTGTaGACAGAGGAAGCCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPIQLVDRGSRRVGEPSPRPSSL*TEEAGG Trigger: CCCTCCGGCTTCCTCTGTCCACAAGCTGGATGGGCG...TGGACTGGGCTCACCCACCCTCCGGCTTCCTCTGTCCACAAGCTGGATGGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR GCA 90 bp | TCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCATACAACCTCTTGTTCTTaGTCAGCCGGTTGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SGKTASPRRGGQRCRALHTTSCS*SAGCGA Trigger: GGCGCCACAACCGGCTGAGCAAGAACAAGAGGTTGT...ATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | GTGAGCCCAGTCCAAATCCCCCAGGGCACCCACCTAGGCATGGGTGGGGCTGCTGGAGTCTTCCGGAAGTaGCGGGGTTTAGGAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VSPVQIPQGTHLGMGGAAGVFRK*RGLGAP Trigger: GGGAGCTCCTAAACCCCGCCACTTCCGGAAGACTCC...AGCAGCCCCACCCATGCCTAGGTGGGTGCCCTGGGGGATTTGGACTGGGCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | CCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCGCATATGTGGTGAGCTaGACAGGATCTGTGCATACG | + |
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Preference number: 4 (lower is better) Translates to: PPGKRQALGVGVSDAGPSAYVVS*TGSVHT Trigger: CGTATGCACAGATCCTGTCCAGCTCACCACATATGC...GGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | TCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCATCTCCTCCAGGGTCTTTaGGGGACCCAAGTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: SGKTASPRRGGQRCRALHLLQGL*GTQVHL Trigger: GAGATGAACTTGGGTCCCCCAAAGACCCTGGAGGAG...ATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCTTGCTCAGCCGGTTGTaGCGCCAGATGTTCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HVLRENGKPSAWGSAMPGLLSRL*RQMFCF Trigger: GAAACAGAACATCTGGCGCCACAACCGGCTGAGCAA...GCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | AAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGGGAGTCTTCCGGAAGTaGCGGGGTTTAGGAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KVHVLRENGKPSAWGSAMGVFRK*RGLGAP Trigger: GGGAGCTCCTAAACCCCGCCACTTCCGGAAGACTCC...CATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCGGCCCCCTTCATAACTaGTTTCTTGGCATAATCCCG | + |
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Preference number: 4 (lower is better) Translates to: HVLRENGKPSAWGSAMPGGPLHN*FLGIIP Trigger: CGGGATTATGCCAAGAAACCAGTTATGAAGGGGGCC...GCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CCGCCCCGCCCATCCAGCTTGTGGACAGAGGAAGCCGGAGGGTGGGTGAGCCCACTCCAGAGGGTGGACTaGTTTCTTGGCATAATCCCG | + |
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Preference number: 4 (lower is better) Translates to: PPRPSSLWTEEAGGWVSPLQRVD*FLGIIP Trigger: CGGGATTATGCCAAGAAACCAGTCCACCCTCTGGAG...TGGGCTCACCCACCCTCCGGCTTCCTCTGTCCACAAGCTGGATGGGCGGGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR TCA 90 bp | GCCGCCTCTTGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGATACGTCGGGGTCCTTaGGGGCCTCGCTGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: AASCLTKVHVLRENGKPSIRRGP*GPRWSL Trigger: CAGTGACCAGCGAGGCCCTCAAGGACCCCGACGTAT...CGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACAAGAGGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR TCA 90 bp | ACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCAGCCCTCGTGATCGGACTCCAGCCCTCGTaGTCCCGCCCCATCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: TTCHPQPPLIWWTPALVIGLQPS*SRPITA Trigger: GGCTGTGATGGGGCGGGATCACGAGGGCTGGAGTCC...GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR GCA 90 bp | AAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGGGCCTCGCTGGTCACTaGACCTTTTCCCGATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KVHVLRENGKPSAWGSAMGLAGH*TFSRFG Trigger: GCCAAATCGGGAAAAGGTGCAGTGACCAGCGAGGCC...CATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR GCA 90 bp | GAGCCGCCTCTTGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGTGGGGGTCAGCGATaGCGGGCCCTCCATGCTACA | + |
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Preference number: 4 (lower is better) Translates to: EPPLVSQKSTSSGKTASPRGGQR*RALHAT Trigger: TGTAGCATGGAGGGCCCGGCATCGCTGACCCCCACG...AGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACAAGAGGCGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CCA 90 bp | CGCCCATCCAGCTTGTGGACAGAGGAAGCCGGAGGGTGGGTGAGCCCAGTCCAACAGCCTCCTCTAATCTaGTGGACTCCAGCCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RPSSLWTEEAGGWVSPVQQPPLI*WTPALV Trigger: CACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTG...TTGGACTGGGCTCACCCACCCTCCGGCTTCCTCTGTCCACAAGCTGGATGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | GGCATGACCCTTGGGGGTTCTGCAGGACGTGGGGTCCATGAGGTGATCTACCCCGAGGAAGCCGGAGGGTaGGTGAGCCCAGTCCAAATC | + |
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Preference number: 4 (lower is better) Translates to: GMTLGGSAGRGVHEVIYPEEAGG*VSPVQI Trigger: GATTTGGACTGGGCTCACCCACCCTCCGGCTTCCTC...GGGGTAGATCACCTCATGGACCCCACGTCCTGCAGAACCCCCAAGGGTCATGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | ACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCAGCCCTCGTGATCCCTAGGGTCAGACCCTaGGTCAGGGTCAGGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TTCHPQPPLIWWTPALVIPRVRP*VRVRVP Trigger: CGGCACCCTGACCCTGACCCAGGGTCTGACCCTAGG...GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | ACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCAGCCCTCGTGATCCTGCTGTGGCAAGGGTaGGGCCGAGGGCATGACCCT | + |
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Preference number: 4 (lower is better) Translates to: TTCHPQPPLIWWTPALVILLWQG*GRGHDP Trigger: AGGGTCATGCCCTCGGCCCCACCCTTGCCACAGCAG...GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR TCA 90 bp | AGCAAGAGGCCCCATCACTCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCAAGCCGGAGGGTGGGTaGGCCCAGTCCAAATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SKRPHHSLTTCHPQPPLIKPEGG*AQSKSP Trigger: GGGGGATTTGGACTGGGCTCACCCACCCTCCGGCTT...GATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGAGTGATGGGGCCTCTTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR TCA 90 bp | ACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCAGCCCTCGTGATCGTGGGGTCCATGAGGTaGTCTACCCCCAGCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TTCHPQPPLIWWTPALVIVGSMR*STPSKR Trigger: CCTCTTGCTGGGGGTAGATCACCTCATGGACCCCAC...GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR TCA 90 bp | TGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGCTTCCTTGTAGATGTTaGCGCCCATGGCATATGTGG | + |
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Preference number: 4 (lower is better) Translates to: CLTKVHVLRENGKPSAWGLPCRC*RPWHMW Trigger: CCACATATGCCATGGGCGTCAACATCTACAAGGAAG...CCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR GCA 90 bp | TCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCAGCCCTCAGGAGTTGTTGGGACTaGAGGGAGGCCAGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLTTCHPQPPLIWWTPALRSCWD*REASPH Trigger: GTGAGGACTGGCCTCCCTGCAGTCCCAACAACTCCT...GAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | CATCACTCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCACGAGGGCATGACCCTTaGGGGTTCTGCAGGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: HHSLTTCHPQPPLIWWTPRGHDP*GFCRTW Trigger: CCACGTCCTGCAGAACCCCCAAGGGTCATGCCCTCG...TGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGAGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CCA 90 bp | CATCACTCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTGGACTCCACCTCCTCTAATCTGGTaGACTCCAGCCCTCGTGATC | + |
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Preference number: 4 (lower is better) Translates to: HHSLTTCHPQPPLIWWTPPPLIW*TPALVI Trigger: GATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGG...TGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGAGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CAA 90 bp | CACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCGCCCCGAAAAGGCGTTaGGTCGCCATGACGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: HVLRENGKPSAWGSAMPGAPKRR*VAMTYC Trigger: GCAATACGTCATGGCGACCAAACGCCTTTTCGGGGC...GCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CCA 90 bp | GGACTGCAGGGAGGCCAGTCCTCACTCAGGCCTAGGGTCAGACCCTaGGTCAGGGTCAGGGTGCCGAAAGCCGACTCCAGAGGGTGGACT | + |
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Preference number: 5 (lower is better) Translates to: GLQGGQSSLRPRVRP*VRVRVPKADSRGWT Trigger: AGTCCACCCTCTGGAGTCGGCTTTCGGCACCCTGACCCTGACCCAGGGTCTGACCCTAGGCCTGAGTGAGGACTGGCCTCCCTGCAGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CAA 90 bp | AAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCATACGTCGGGGTCCTaGAGGGCCTCGCTGGTCACT | + |
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Preference number: 5 (lower is better) Translates to: KSTSSGKTASPRRGGQRCHTSGS*RASLVT Trigger: AGTGACCAGCGAGGCCCTCAAGGACCCCGACGTATG...GCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS GCA 90 bp | ACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATaGCGGGCCCTCCATGCTACAACCTCTTGTTCTTGCTCAGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: TSSGKTASPRRGGQR*RALHATTSCSCSAG Trigger: ACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CAA 90 bp | ACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCCATGCTACAACCTCTaGTTCTTGCTCAGCCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: TSSGKTASPRRGGQRCRAPCYNL*FLLSRL Trigger: CAACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGG...GGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CAA 90 bp | AAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCTACAACCTCTTGTTCTaGCTCAGCCGGTTGTGGCGC | + |
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Preference number: 5 (lower is better) Translates to: KSTSSGKTASPRRGGQRCYNLLF*LSRLWR Trigger: GCGCCACAACCGGCTGAGCAAGAACAAGAGGTTGTA...GCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATGCCAGAAAGCTCTTTATaGGCCTCCAGGGCCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: KVHVLRENGKPSAWGSAMPESSL*ASRALV Trigger: GACCAGGGCCCTGGAGGCCAATAAAGAGCTTTCTGG...CATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CCA 90 bp | CATCACTCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTaGACTCCAGCCCTCGTGATCCCGCCCCATCACAGCCAGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HHSLTTCHPQPPLIW*TPALVIPPHHSQAG Trigger: CCCTGCCTGGCTGTGATGGGGCGGGATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS CCA 90 bp | CCCCATCACTCCCTAACTACGTGTCACCCTCAGCCTCCTCTAATCTaGTGGACTCCAGCCCTCGTGATCCCGCCCCATCACAGCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PHHSLTTCHPQPPLI*WTPALVIPPHHSQA Trigger: TGCCTGGCTGTGATGGGGCGGGATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAGGGAGTGATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CAA 90 bp | TGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTGGGGGGCTCCTCCAGGGTCTTaGGGGGACCCAAGTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: CLTKVHVLRENGKPSAWGAPPGS*GDPSSS Trigger: AGATGAACTTGGGTCCCCCAAAGACCCTGGAGGAGC...CCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CAA 90 bp | GTCCATGAGGTGATCTACCCCCAGCAAGAGGCCCCATCACTCCCTAACTACGTGCCCCGCCCATCCAGCTaGTGGACAGAGGAAGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: VHEVIYPQQEAPSLPNYVPRPSS*WTEEAG Trigger: TCCGGCTTCCTCTGTCCACAAGCTGGATGGGCGGGG...CACGTAGTTAGGGAGTGATGGGGCCTCTTGCTGGGGGTAGATCACCTCATGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS GCA 90 bp | AGTCCTCACTCAGGCCTAGGGTCAGACCCTGGGTCAGGGTCAGGGTaGCGAAAGCCGACTCCAGAGGGTGGACTGGTTTCTTGGCATAAT | + |
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Preference number: 5 (lower is better) Translates to: SPHSGLGSDPGSGSG*RKPTPEGGLVSWHN Trigger: ATTATGCCAAGAAACCAGTCCACCCTCTGGAGTCGGCTTTCGGCACCCTGACCCTGACCCAGGGTCTGACCCTAGGCCTGAGTGAGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS-3UTR CAA 90 bp | GCCGCCTCTTGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGTTCTTGCTCAGCCGGTaGTGGCGCCAGATGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: AASCLTKVHVLRENGKPSFLLSR*WRQMFC Trigger: ACAGAACATCTGGCGCCACAACCGGCTGAGCAAGAA...CGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACAAGAGGCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS-3UTR CAA 90 bp | GCCGCCTCTTGTCTCACAAAAGTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCACCTTTTCCCGATTaGGCCCCCTTCATAACTGGT | + |
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Preference number: 5 (lower is better) Translates to: AASCLTKVHVLRENGKPSAPFPD*APFITG Trigger: ACCAGTTATGAAGGGGGCCAAATCGGGAAAAGGTGC...CGAGGGCTTGCCGTTTTCCCGGAGGACGTGGACTTTTGTGAGACAAGAGGCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CCA 72 bp | GTCCACGTCCTCCGGGAAAACGGCAAGCCCTCGGCGTaGGGGTCAGCGATGCCGGGCCCTCCATGCTACAAC | + |
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Preference number: 6 (lower is better) Translates to: VHVLRENGKPSA*GSAMPGPPCYN Trigger: GTTGTAGCATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCCGGAGGACGTGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CAA 90 bp | CCAGCCCTCGTGATCCCGCCCCATCACAGCCAGGCAGGGCAGGAGTaGTTGGGACTGCAGGGAGGCCAGTCCTCACTCAGGCCTAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PALVIPPHHSQAGQE*LGLQGGQSSLRPRV Trigger: GACCCTAGGCCTGAGTGAGGACTGGCCTCCCTGCAGTCCCAACAACTCCTGCCCTGCCTGGCTGTGATGGGGCGGGATCACGAGGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS CAA 90 bp | GCCCTCGTGATCCCGCCCCATCACAGCCAGGCAGGGCAGGAGTTGTaGGGACTGCAGGGAGGCCAGTCCTCACTCAGGCCTAGGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ALVIPPHHSQAGQEL*GLQGGQSSLRPRVR Trigger: TCTGACCCTAGGCCTGAGTGAGGACTGGCCTCCCTGCAGTCCCAACAACTCCTGCCCTGCCTGGCTGTGATGGGGCGGGATCACGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS GCA 72 bp | CCCTCGGCGTGGGGGTCAGCGATGCCGGGCCCTCCATaGTACAACCTCTTGTTCTTGCTCAGCCGGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PSAWGSAMPGPP*YNLLFLLSRLW Trigger: CCACAACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CCA 72 bp | GGAGGCCAGTCCTCACTCAGGCCTAGGGTCAGACCCTaGGTCAGGGTCAGGGTGCCGAAAGCCGACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GGQSSLRPRVRP*VRVRVPKADSR Trigger: TCTGGAGTCGGCTTTCGGCACCCTGACCCTGACCCAGGGTCTGACCCTAGGCCTGAGTGAGGACTGGCCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS CAA 72 bp | ATCCCGCCCCATCACAGCCAGGCAGGGCAGGAGTTGTaGGGACTGCAGGGAGGCCAGTCCTCACTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: IPPHHSQAGQEL*GLQGGQSSLRP Trigger: AGGCCTGAGTGAGGACTGGCCTCCCTGCAGTCCCAACAACTCCTGCCCTGCCTGGCTGTGATGGGGCGGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS GCA 72 bp | GGGAAAACGGCAAGCCCTCGGCGTGGGGGTCAGCGATaGCGGGCCCTCCATGCTACAACCTCTTGTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GKTASPRRGGQR*RALHATTSCSC Trigger: GCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCGCTGACCCCCACGCCGAGGGCTTGCCGTTTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS GCA 72 bp | CCCATCACAGCCAGGCAGGGCAGGAGTTGTTGGGACTaGAGGGAGGCCAGTCCTCACTCAGGCCTAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PITARQGRSCWD*REASPHSGLGS Trigger: TGACCCTAGGCCTGAGTGAGGACTGGCCTCCCTGCAGTCCCAACAACTCCTGCCCTGCCTGGCTGTGATGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS CAA 72 bp | GGGTCAGCGATGCCGGGCCCTCCATGCTACAACCTCTaGTTCTTGCTCAGCCGGTTGTGGCGCCAGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSAMPGPPCYNL*FLLSRLWRQMF Trigger: GAACATCTGGCGCCACAACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCGCTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CCA 72 bp | CTAACTACGTGTCACCCTCAGCCTCCTCTAATCTGGTaGACTCCAGCCCTCGTGATCCCGCCCCATCACAGC | + |
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Preference number: 6 (lower is better) Translates to: LTTCHPQPPLIW*TPALVIPPHHS Trigger: GCTGTGATGGGGCGGGATCACGAGGGCTGGAGTCCACCAGATTAGAGGAGGCTGAGGGTGACACGTAGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589174.1 |
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| CDS GCA 72 bp | CGATGCCGGGCCCTCCATGCTACAACCTCTTGTTCTTaGTCAGCCGGTTGTGGCGCCAGATGTTCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCRALHATTSCS*SAGCGARCSVS Trigger: GGAAACAGAACATCTGGCGCCACAACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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| CDS CAA 72 bp | GCGATGCCGGGCCCTCCATGCTACAACCTCTTGTTCTaGCTCAGCCGGTTGTGGCGCCAGATGTTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AMPGPPCYNLLF*LSRLWRQMFCF Trigger: GAAACAGAACATCTGGCGCCACAACCGGCTGAGCAAGAACAAGAGGTTGTAGCATGGAGGGCCCGGCATCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330133.5 |
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