RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL51 (Homo sapiens)

Ensembl gene IDs: ENSG00000111639

Ensembl transcript IDs: ENST00000229238.5, ENST00000537701.5, ENST00000543164.5, ENST00000543703.1

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGACGAAGACAGCCATCTTaGGCCTTACCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRRRQPS*ALPRQL
Trigger: CAGCTGCCTGGGTAAGGCCCAAGATGGCTGTCTTCG...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS-3UTR TCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGAATAAGCCCAAGAAGATaGCAGGAACCGTCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRISPRR*QEPSPP
Trigger: TGGCGGGGACGGTTCCTGTCATCTTCTTGGGCTTAT...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS-3UTR GCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGACAAGAGAGAAGCTTCTaGACGCCAGAGGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRQERSF*TPEAPS
Trigger: ACTGGGTGCCTCTGGCGTGCAGAAGCTTCTCTCTTG...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS-3UTR TCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGAAAAAGGCAAGTGGTGTaGAGCCCAAACCTAAGATCC +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRKRQVV*SPNLRS
Trigger: GGATCTTAGGTTTGGGCTTCACACCACTTGCCTTTT...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS-3UTR CCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGACATACACTCCGAACATaGCCCTTTTCTCGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRHTLRT*PFSRSN
Trigger: GTTGGAACGAGAAAAGGGCCATGTTCGGAGTGTATG...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS-3UTR GCA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGACGTTTATTAAGGTTGTaGAGGTCATCAGCGAACATT +
Preference number: 4 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRRLLRL*RSSANI
Trigger: AATGTTCGCTGATGACCTGCACAACCTTAATAAACG...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS GCA 90 bp ATACCGATCAATCTAGGCACACCTCCTTTCCTGGGGGTGACTGAATaGCCAGCCAGGGACGCGACGTCTCTGGCCAGCAGAAATACGGCC +
Preference number: 5 (lower is better)
Translates to: IPINLGTPPFLGVTE*PARDATSLASRNTA
Trigger: GGCCGTATTTCTGCTGGCCAGAGACGTCGCGTCCCTGGCTGGGCATTCAGTCACCCCCAGGAAAGGAGGTGTGCCTAGATTGATCGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537701.5
CDS TCA 90 bp CCTATTTTACTACTGGGGAGGAGATTTGAGGTCCTGAAAGTGAAGTaGCTTGCTGGACGTCACTTAGCAGAGGAGATGGCGAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PILLLGRRFEVLKVK*LAGRHLAEEMAKPG
Trigger: TCCAGGTTTCGCCATCTCCTCTGCTAAGTGACGTCCAGCAAGTCACTTCACTTTCAGGACCTCAAATCTCCTCCCCAGTAGTAAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543164.5
CDS GCA 90 bp GTTGAGAACCTGGAACCCGCTTCCAATGACCAAGCCCTTTCTCTGTaGCTCACAACAGTCTTCCGCTGTAGCTGTTTTTATTACCCCTAT +
Preference number: 5 (lower is better)
Translates to: VENLEPASNDQALSL*LTTVFRCSCFYYPY
Trigger: ATAGGGGTAATAAAAACAGCTACAGCGGAAGACTGTTGTGAGGCACAGAGAAAGGGCTTGGTCATTGGAAGCGGGTTCCAGGTTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543164.5
CDS-3UTR CAA 90 bp CCTAAGATCCTAAGATCTAGGATGAGTCAAGACTTCATAGTCTACATGAGTAGAGCGAAGACAGCCATCTaGGGCCTTACCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PKILRSRMSQDFIVYMSRAKTAI*GLTQAA
Trigger: AGCTGCCTGGGTAAGGCCCAAGATGGCTGTCTTCGC...TCTACTCATGTAGACTATGAAGTCTTGACTCATCCTAGATCTTAGGATCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229238.5
CDS CCA 72 bp TCTGGCCAGCAGAAATACGGCCTCCTCCCCGCCGACTaGGCAAAGGGGGACCTTGCGGCCAAGGAGGGATTC +
Preference number: 6 (lower is better)
Translates to: SGQQKYGLLPAD*AKGDLAAKEGF
Trigger: GAATCCCTCCTTGGCCGCAAGGTCCCCCTTTGCCCAGTCGGCGGGGAGGAGGCCGTATTTCTGCTGGCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537701.5
ENST00000543164.5
ENST00000543703.1
CDS TCA 72 bp GATCAATCTAGGCACACCTCCTTTCCTGGGGGTGACTaGATGCCCAGCCAGGGACGCGACGTCTCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: DQSRHTSFPGGD*MPSQGRDVSGQ
Trigger: CTGGCCAGAGACGTCGCGTCCCTGGCTGGGCATTCAGTCACCCCCAGGAAAGGAGGTGTGCCTAGATTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537701.5
CDS TCA 72 bp GTGCTTTTCAAAGTTTCCTCCTTTCCTGGGGGTGACTaGATGCCCAGCCAGGGACGCGACGTCTCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: VLFKVSSFPGGD*MPSQGRDVSGQ
Trigger: CTGGCCAGAGACGTCGCGTCCCTGGCTGGGCATTCAGTCACCCCCAGGAAAGGAGGAAACTTTGAAAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543703.1
CDS GCA 72 bp CTGGAACCCGCTTCCAATGACCAAGCCCTTTCTCTGTaGCTCACAACAGTCTTCCGCTGTAGCTGTTTTTAT +
Preference number: 6 (lower is better)
Translates to: LEPASNDQALSL*LTTVFRCSCFY
Trigger: ATAAAAACAGCTACAGCGGAAGACTGTTGTGAGGCACAGAGAAAGGGCTTGGTCATTGGAAGCGGGTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543164.5