Pregenerated sensors for MRPL50 (Homo sapiens)
Ensembl gene IDs: ENSG00000136897Ensembl transcript IDs: ENST00000374865.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGAATGAGCAGCCCCCTTaGTCAGGGAAAGACAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQNEQPP*SGKDSD Trigger: ATCACTGTCTTTCCCTGAGCAAGGGGGCTGCTCATT...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGCTTACTGGAAAGAAATaGCAAGGCAGAGCGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQLTGKK*QGRAQA Trigger: TGCTTGCGCTCTGCCTTGCCATTTCTTTCCAGTAAG...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGGGCATCTGTGGACTTTaGTATCCAAGTAGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQGICGL*YPSRCP Trigger: AGGACACCTACTTGGATACCAAAGTCCACAGATGCC...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGGTCCTAACGATCACATaGAGCTGCTTGGTTTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQVLTIT*SCLVFA Trigger: TGCAAAAACCAAGCAGCTTCATGTGATCGTTAGGAC...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAACTGGCACATCTCTTATaGGGAAGAGTCACAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: PYFHLALCFSVSLDQKEKLAHLL*GRVTAL Trigger: GAGTGCTGTGACTCTTCCTCATAAGAGATGTGCCAG...TTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGTGTGTTCCCCATCTGTaGATTCAACCAATTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQCVPHL*IQPIVD Trigger: ATCCACAATTGGTTGAATCCACAGATGGGGAACACA...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGTTCCCAACTGAATTTTaGCCTCTTCAAAGGAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: SAFEACRSSGPTPDLPNQFPTEF*PLQRSN Trigger: GTTACTCCTTTGAAGAGGGCAAAATTCAGTTGGGAA...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR CAA 90 bp | TCAATACCAGCATCTAGATCCATGTTCTCAAAACATAATCAGCTTTaGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATC | + |
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Preference number: 2 (lower is better) Translates to: SIPASRSMFSKHNQL*KHAEAQDLLQTYQI Trigger: GATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACATGGATCTAGATGCTGGTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCCAATGATTCCATGCTaGATCTTTTACACAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLPMIPC*IFYTAE Trigger: TTCTGCTGTGTAAAAGATTCAGCATGGAATCATTGG...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR CAA 90 bp | TCTTTCAGGAAAACTAAAGGCCATTATTCTGATATATTCACTGTATaGAACTATAAACCAGTGATGCCCTCTAGTGGTACTGATGGACGT | + |
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Preference number: 2 (lower is better) Translates to: SFRKTKGHYSDIFTV*NYKPVMPSSGTDGR Trigger: ACGTCCATCAGTACCACTAGAGGGCATCACTGGTTTATAGTTCAATACAGTGAATATATCAGAATAATGGCCTTTAGTTTTCCTGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAAATTAGACATAGAATCTaGCACATCTCTTATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PYFHLALCFSVSLDQKEKIRHRI*HISYEE Trigger: TTCCTCATAAGAGATGTGCCAGATTCTATGTCTAAT...TTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGTTTCCATCTTGCCCTTaGTTTTTCCGTGTCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SAFEACRSSGPTPDLPNQFPSCP*FFRVSG Trigger: TCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAA...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR-3UTR CAA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCGAAGCTGCTTGGTTTTaGCAGTTACCACTCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLEAAWF*QLPLQL Trigger: CAACTGGAGTGGTAACTGCAAAAACCAAGCAGCTTC...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR GCA 72 bp | TTTCCACATAGACCTTCTCATCCCTTATTTCCATCTTaGCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: FPHRPSHPLFPS*PLFFRVSGSEG Trigger: TCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR GCA 72 bp | TTCTGTCCTAACGATCACATGAAGCTGCTTGGTTTTTaGAGTTACCACTCCAGTTGTAACTGTTTTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: FCPNDHMKLLGF*SYHSSCNCFST Trigger: TGTGGAAAAACAGTTACAACTGGAGTGGTAACTGCAAAAACCAAGCAGCTTCATGTGATCGTTAGGACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | GCATCTGTGGACTTTGGTATCCAAGTAGGTGTCCTGGAACCAATCCCCAAGGAATCACATGAAGCTGCTTaGTTTTTGCAGTTACCACTC | + |
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Preference number: 4 (lower is better) Translates to: ASVDFGIQVGVLEPIPKESHEAA*FLQLPL Trigger: GAGTGGTAACTGCAAAAACCAAGCAGCTTCATGTGA...TTCCTTGGGGATTGGTTCCAGGACACCTACTTGGATACCAAAGTCCACAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGCAGTCAGAACAATATAAGACATTCCTTCTGTCTCATTACTCTCCAGCCAATGAGCAGCCCCCTTaGTCAGGGAAAGACAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: CQQSEQYKTFLLSHYSPANEQPP*SGKDSD Trigger: ATCACTGTCTTTCCCTGAGCAAGGGGGCTGCTCATT...GGCTGGAGAGTAATGAGACAGAAGGAATGTCTTATATTGTTCTGACTGCTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCTGGCACATCTCTTATaGGGAAGAGTCACAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLLAHLL*GRVTAL Trigger: GAGTGCTGTGACTCTTCCTCATAAGAGATGTGCCAG...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | CCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAAGAGCTCCAGGCACTCTaGCACCTGAAGTTCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: PYFHLALCFSVSLDQKEKELQAL*HLKFLN Trigger: ATTCAAGAACTTCAGGTGTCAGAGTGCCTGGAGCTC...TTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGCTTACTGGAAAGAAATaGCAAGGCAGAGCGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FHIDLLIPYFHLALCFSVLTGKK*QGRAQA Trigger: TGCTTGCGCTCTGCCTTGCCATTTCTTTCCAGTAAG...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | CCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAAGACTGTTGTTTCAGGTaGCAGTACTTGTCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: PYFHLALCFSVSLDQKEKDCCFR*QYLSPT Trigger: GGTGGGAGACAAGTACTGCCACCTGAAACAACAGTC...TTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | ATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGTCCTAACGATCACATaGAGCTGCTTGGTTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: IDLLIPYFHLALCFSVSLVLTIT*SCLVFA Trigger: TGCAAAAACCAAGCAGCTTCATGTGATCGTTAGGAC...CAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | ACTGAATTTTGCCCTCTTCAAAGGAGTAACCCTGGGAAAGAGAATAAATGCAACGGCATCTGTGGACTTTaGTATCCAAGTAGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TEFCPLQRSNPGKENKCNGICGL*YPSRCP Trigger: AGGACACCTACTTGGATACCAAAGTCCACAGATGCC...GTTGCATTTATTCTCTTTCCCAGGGTTACTCCTTTGAAGAGGGCAAAATTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR GCA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGAAGCTGCTTGGTTTTTaGAGTTACCACTCCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FHIDLLIPYFHLALCFSVKLLGF*SYHSSC Trigger: ACAACTGGAGTGGTAACTGCAAAAACCAAGCAGCTT...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTTTATAAAAGGGGCTTaGGCATCTGTGGACTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: FHIDLLIPYFHLALCFSVFIKGA*ASVDFG Trigger: ACCAAAGTCCACAGATGCCCAAGCCCCTTTTATAAA...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | ACTGAATTTTGCCCTCTTCAAAGGAGTAACCCTGGGAAAGAGAATAAATGCAACAACATAATCAGCTTTTaGAGCATGCAGAAGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TEFCPLQRSNPGKENKCNNIISF*SMQKLR Trigger: CCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTT...GTTGCATTTATTCTCTTTCCCAGGGTTACTCCTTTGAAGAGGGCAAAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR GCA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTTCCCAACTGAATTTTaGCCTCTTCAAAGGAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: FHIDLLIPYFHLALCFSVFPTEF*PLQRSN Trigger: GTTACTCCTTTGAAGAGGGCAAAATTCAGTTGGGAA...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR GCA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCCCTTATTTCCATCTTaGCCTTTGTTTTTCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLPLFPS*PLFFRV Trigger: GACACGGAAAAACAAAGGGCAAGATGGAAATAAGGG...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | ACTGAATTTTGCCCTCTTCAAAGGAGTAACCCTGGGAAAGAGAATAAATGCAACTGTGTTCCCCATCTGTaGATTCAACCAATTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TEFCPLQRSNPGKENKCNCVPHL*IQPIVD Trigger: ATCCACAATTGGTTGAATCCACAGATGGGGAACACA...GTTGCATTTATTCTCTTTCCCAGGGTTACTCCTTTGAAGAGGGCAAAATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | ACTGAATTTTGCCCTCTTCAAAGGAGTAACCCTGGGAAAGAGAATAAATGCAACCCAATGATTCCATGCTaGATCTTTTACACAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TEFCPLQRSNPGKENKCNPMIPC*IFYTAE Trigger: TTCTGCTGTGTAAAAGATTCAGCATGGAATCATTGG...GTTGCATTTATTCTCTTTCCCAGGGTTACTCCTTTGAAGAGGGCAAAATTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR CAA 72 bp | CATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTaGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAATT | + |
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Preference number: 4 (lower is better) Translates to: HRPSHPLFPSCP*FFRVSGSEGKI Trigger: AATTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR TCA 90 bp | CCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGGATCAGAAGGAAAAAAATGAGCCAGAAGATTaGACTTTAGACGACTATCTT | + |
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Preference number: 4 (lower is better) Translates to: PYFHLALCFSVSLDQKEKNEPED*TLDDYL Trigger: AAGATAGTCGTCTAAAGTTCAATCTTCTGGCTCATT...TTTTTCCTTCTGATCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGG 39% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CCA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCATTAGACATAGAATCTaGCACATCTCTTATGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLIRHRI*HISYEE Trigger: TTCCTCATAAGAGATGTGCCAGATTCTATGTCTAAT...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| 3UTR CAA 72 bp | AAAACTAAAGGCCATTATTCTGATATATTCACTGTATaGAACTATAAACCAGTGATGCCCTCTAGTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: KTKGHYSDIFTV*NYKPVMPSSGT Trigger: AGTACCACTAGAGGGCATCACTGGTTTATAGTTCAATACAGTGAATATATCAGAATAATGGCCTTTAGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | GCATCTGTGGACTTTGGTATCCAAGTAGGTGTCCTGGAACCAATCCCCAAGGAATTTCCATCTTGCCCTTaGTTTTTCCGTGTCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ASVDFGIQVGVLEPIPKEFPSCP*FFRVSG Trigger: TCCAGAGACACGGAAAAACAAAGGGCAAGATGGAAA...TTCCTTGGGGATTGGTTCCAGGACACCTACTTGGATACCAAAGTCCACAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | TCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCCAGACTTACCAAATCAGGAAGCTGCTTGGTTTTaGCAGTTACCACTCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SAFEACRSSGPTPDLPNQEAAWF*QLPLQL Trigger: CAACTGGAGTGGTAACTGCAAAAACCAAGCAGCTTC...CTGATTTGGTAAGTCTGGAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTTCAGGTGGCAGTACTaGTCTCCCACCTCAATACCA | + |
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Preference number: 5 (lower is better) Translates to: FHIDLLIPYFHLALCFSVFRWQY*SPTSIP Trigger: TGGTATTGAGGTGGGAGACAAGTACTGCCACCTGAA...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | ATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGTCTCTGTCCCTTATTTCCATCTaGCCCTTTGTTTTTCCGTGT | + |
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Preference number: 5 (lower is better) Translates to: IDLLIPYFHLALCFSVSLSLISI*PFVFPC Trigger: ACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGA...CAGAGACACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | TTCCACATAGACCTTCTCATCCCTTATTTCCATCTTGCCCTTTGTTTTTCCGTGAATTTACCAAGACTGTaGTTTCAGGTGGCAGTACTT | + |
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Preference number: 5 (lower is better) Translates to: FHIDLLIPYFHLALCFSVNLPRL*FQVAVL Trigger: AAGTACTGCCACCTGAAACAACAGTCTTGGTAAATT...CACGGAAAAACAAAGGGCAAGATGGAAATAAGGGATGAGAAGGTCTATGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCTCAAAACATAATCAGCTTTTGAAGCATGCAGAAGCTCAGGACCTACTCAAACATAATCAGCTTTaGAAGCATGCAGAAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: MFSKHNQLLKHAEAQDLLKHNQL*KHAEAQ Trigger: CTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTT...GAGTAGGTCCTGAGCTTCTGCATGCTTCAAAAGCTGATTATGTTTTGAGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374865.5 |
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