Pregenerated sensors for MRPL47 (Homo sapiens)
Ensembl gene IDs: ENSG00000136522Ensembl transcript IDs: ENST00000259038.6, ENST00000392659.2, ENST00000476781.6
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTaGCAGTTACCATCACCTTCACACTCTAAGGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: YSNSKTTVLPLL*QLPSPSHSKVA Trigger: TGCTACCTTAGAGTGTGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCAGCAATCTCTGCCGCTTaGCCTCCTGCTCTAGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSAISAA*PPALGL Trigger: TAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGC...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATTGCCGCTTGGCCTCCTaGTCTAGGGTTAGAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYCRLAS*SRVRSM Trigger: CATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCA...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTGCCGCTTGGCCTCCTaGTCTAGGGTTAGAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPCRLAS*SRVRSM Trigger: CATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCA...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCATTGTTCCTTAGTTGCTaGCAGGTCCATGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSLFLSC*QVHAAP Trigger: TGGAGCAGCATGGACCTGTCAGCAACTAAGGAACAA...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCGGCATTGGCAATCTCTaGCGCTTGGCCTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTGIGNL*RLASCS Trigger: AGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCC...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCAGGCATTGGCAATCTCTaGCGCTTGGCCTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSGIGNL*RLASCS Trigger: AGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCC...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTTGTTCCTTAGTTGCTaGCAGGTCCATGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPLFLSC*QVHAAP Trigger: TGGAGCAGCATGGACCTGTCAGCAACTAAGGAACAA...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCGCAATCTCTGCCGCTTaGCCTCCTGCTCTAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTAISAA*PPALGL Trigger: TAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGC...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCACTCTGGACTTGGCATTaGCAATCTCTGCCGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPLWTWH*QSLPLG Trigger: GCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAG...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATTTCCTTCCGTGCTTTaGTGCGGGCTCGTTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPFPSVL*CGLVSH Trigger: GTGAGAAACGAGCCCGCATCAAAGCACGGAAGGAAA...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCTTTCCTTCCGTGCTTTaGTGCGGGCTCGTTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTFPSVL*CGLVSH Trigger: GTGAGAAACGAGCCCGCATCAAAGCACGGAAGGAAA...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCACAAGGTATAACCCACTaGTTGAACTTGTGCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSQGITH*LNLCQM Trigger: CATCTGGCACAAGTTCAAGCAGTGGGTTATACCTTG...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCAGTATTGCCTTTGCTGTaGCAGTTACCATCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSVLPLL*QLPSPS Trigger: TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATAC...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATCTTGACAATGTGGTATaGAGTAATCCTGTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYLDNVV*SNPVQA Trigger: TGCCTGCACAGGATTACTTCATACCACATTGTCAAG...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259038.6 |
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| CDS-3UTR TCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATTCTCACGTTCCAGTCTaGGAAAATGGTCCACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYSHVPV*ENGPHK Trigger: CTTATGTGGACCATTTTCTCAGACTGGAACGTGAGA...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCAATCTTAGACAAGACTTaGCTTTTGGGCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSILDKT*LLGFSK Trigger: CTTGCTGAAGCCCAAAAGTCAAGTCTTGTCTAAGAT...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATATGAAGTAATCCTGTaGAGGCAGGGACCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPYEVIL*RQGPEE Trigger: CTCCTCAGGTCCCTGCCTGCACAGGATTACTTCATA...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259038.6 |
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| CDS-3UTR GCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCACTGACAGGTCCATGCTaGTCCAGATTTTACTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSLTGPC*SRFYFF Trigger: GAAAAAGTAAAATCTGGAGCAGCATGGACCTGTCAG...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCACAAAAACTACGGTATTaGCTTTGCTGTGGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSQKLRY*LCCGSY Trigger: GTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTG...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTGTATTGCCTTTGCTGTaGCAGTTACCATCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPVLPLL*QLPSPS Trigger: TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATAC...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATCTGACAGGTCCATGCTaGTCCAGATTTTACTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYLTGPC*SRFYFF Trigger: GAAAAAGTAAAATCTGGAGCAGCATGGACCTGTCAG...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCCTACGGTATTGCCTTTaGTGTGGCAGTTACCATCAC | + |
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Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTLRYCL*CGSYHH Trigger: GTGATGGTAACTGCCACAGCAAAGGCAATACCGTAG...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTCAAAAACTACGGTATTaGCTTTGCTGTGGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPQKLRY*LCCGSY Trigger: GTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTG...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATACAAGACTTGACTTTTaGGCTTCAGCAAGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYTRLDF*ASARCG Trigger: TCCACATCTTGCTGAAGCCCAAAAGTCAAGTCTTGT...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCAGATTTCAGGGCGGATaGAACTCTCCTACAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTRFQGG*NSPTKK Trigger: CTTCTTTGTAGGAGAGTTTCATCCGCCCTGAAATCT...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCAAGATTTCAGGGCGGATaGAACTCTCCTACAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPRFQGG*NSPTKK Trigger: CTTCTTTGTAGGAGAGTTTCATCCGCCCTGAAATCT...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCTCTCACGTTCCAGTCTaGGAAAATGGTCCACATAAG | + |
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Preference number: 4 (lower is better) Translates to: ACLNVRIYKVGISSELYTSHVPV*ENGPHK Trigger: CTTATGTGGACCATTTTCTCAGACTGGAACGTGAGA...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACAAGGTATAACCCACTaGTTGAACTTGTGCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSQGITH*LNLCQM Trigger: CATCTGGCACAAGTTCAAGCAGTGGGTTATACCTTG...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR TCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCAATCTTAGACAAGACTTaGCTTTTGGGCTTCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSILDKT*LLGFSK Trigger: CTTGCTGAAGCCCAAAAGTCAAGTCTTGTCTAAGAT...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATTGCTGACAGGTCCATaGTGCTCCAGATTTTACTTT | + |
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Preference number: 4 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPLLTGP*CSRFYF Trigger: AAAGTAAAATCTGGAGCAGCATGGACCTGTCAGCAA...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR GCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCATTGCTGACAGGTCCATaGTGCTCCAGATTTTACTTT | + |
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Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSLLTGP*CSRFYF Trigger: AAAGTAAAATCTGGAGCAGCATGGACCTGTCAGCAA...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATGCATCTTCTCTTTCCTaGACAACTTTATCTAATGCA | + |
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Preference number: 4 (lower is better) Translates to: NQSPPFINSNTHILFIAYASSLS*TTLSNA Trigger: TGCATTAGATAAAGTTGTCCAGGAAAGAGAAGATGC...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCAGCATCTTCTCTTTCCTaGACAACTTTATCTAATGCA | + |
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Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSASSLS*TTLSNA Trigger: TGCATTAGATAAAGTTGTCCAGGAAAGAGAAGATGC...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CCA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCAAAAGGATGTCACATTTaGTGTACTCTTAGGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSKGCHI*CTLRQQ Trigger: TTGTTGCCTAAGAGTACACCAAATGTGACATCCTTT...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476781.6 |
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| CDS GCA 90 bp | TCTACTACCTTATCTAACCGCTCTGGACTTGGCATTGGCAATCTCTaGCGCTTGGCCTCCTGCTCTAGGGTTAGAAGCATGTTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: STTLSNRSGLGIGNL*RLASCSRVRSMFLS Trigger: AGAAAGAAACATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAAGGTAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS CCA 90 bp | CCTTATCTAACCGCTCTGGACTTGGCATTGGCAATCTCTGCCGCTTaGCCTCCTGCTCTAGGGTTAGAAGCATGTTTCTTTCTTTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: PYLTALDLALAISAA*PPALGLEACFFLSV Trigger: TACTGAAAGAAAGAAACATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCAGCTCTGGACTTGGCATaGGCAATCTCTGCCGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSALDLA*AISAAW Trigger: CCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGC...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTGCTCTGGACTTGGCATaGGCAATCTCTGCCGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPALDLA*AISAAW Trigger: CCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGC...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATCTAACCGCTCTGGACTaGGCATTGGCAATCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: NQSPPFINSNTHILFIAYLTALD*ALAISA Trigger: GGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAG...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCAACCCACTGCTTGAACTaGTGCCAGATGATTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSTHCLN*CQMILP Trigger: TGGAAGAATCATCTGGCACAAGTTCAAGCAGTGGGT...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTTTTCCTTCCGTGCTTaGATGCGGGCTCGTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPFSFRA*MRARFS Trigger: TGAGAAACGAGCCCGCATCAAAGCACGGAAGGAAAA...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATACTACGGTATTGCCTTaGCTGTGGCAGTTACCATCA | + |
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Preference number: 5 (lower is better) Translates to: NQSPPFINSNTHILFIAYTTVLP*LWQLPS Trigger: TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGT...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTGGTATAACCCACTGCTaGAACTTGTGCCAGATGATT | + |
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Preference number: 5 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPGITHC*NLCQMI Trigger: AATCATCTGGCACAAGTTCAAGCAGTGGGTTATACC...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCTTTTCCTTCCGTGCTTaGATGCGGGCTCGTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: ACLNVRIYKVGISSELYTFSFRA*MRARFS Trigger: TGAGAAACGAGCCCGCATCAAAGCACGGAAGGAAAA...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTTCATCAAAAACTACGGTATaGCCTTTGCTGTGGCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: SNSKTTVLPLLWQLPSPSSKTTV*PLLWQL Trigger: TAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGA...TGAAGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCACCCACTGCTTGAACTaGTGCCAGATGATTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ACLNVRIYKVGISSELYTTHCLN*CQMILP Trigger: TGGAAGAATCATCTGGCACAAGTTCAAGCAGTGGGT...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | AATCAAAGTCCTCCGTTTATTAACAGCAATACCCACATCCTCTTCATAGCCTATCATCTTAGACAAGACTaGACTTTTGGGCTTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: NQSPPFINSNTHILFIAYHLRQD*TFGLQQ Trigger: TTGCTGAAGCCCAAAAGTCAAGTCTTGTCTAAGATG...ATAGGCTATGAAGAGGATGTGGGTATTGCTGTTAATAAACGGAGGACTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCAACTACGGTATTGCCTTaGCTGTGGCAGTTACCATCA | + |
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Preference number: 5 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSTTVLP*LWQLPS Trigger: TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGT...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACCTCTTCTAGTCCTTTCCTaGACAATGTGGTATGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: YSNSKTTVLPLLWQLPSPLLVLS*TMWYEV Trigger: TACTTCATACCACATTGTCAAGGAAAGGACTAGAAG...AGGTGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCGGTATAACCCACTGCTaGAACTTGTGCCAGATGATT | + |
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Preference number: 5 (lower is better) Translates to: ACLNVRIYKVGISSELYTGITHC*NLCQMI Trigger: AATCATCTGGCACAAGTTCAAGCAGTGGGTTATACC...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | AACTATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCACATCTTAGACAAGACTaGACTTTTGGGCTTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: NYYSNSKTTVLPLLWQLPHLRQD*TFGLQQ Trigger: TTGCTGAAGCCCAAAAGTCAAGTCTTGTCTAAGATG...TGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | GCCTGCTTAAATGTCAGAATTTATAAAGTGGGAATCTCATCTGAACTTTATACCTCAAAAACTACGGTATaGCCTTTGCTGTGGCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: ACLNVRIYKVGISSELYTSKTTV*PLLWQL Trigger: TAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGA...GGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS-3UTR CAA 90 bp | TATTATTCAAATTCAAAAACTACGGTATTGCCTTTGCTGTGGCAGTTACCATCACTTCTAGTCCTTTCCTaGACAATGTGGTATGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: YYSNSKTTVLPLLWQLPSLLVLS*TMWYEV Trigger: TACTTCATACCACATTGTCAAGGAAAGGACTAGAAG...TGATGGTAACTGCCACAGCAAAGGCAATACCGTAGTTTTTGAATTTGAATAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259038.6 ENST00000476781.6 |
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| CDS GCA 72 bp | TTATCTAACCGCTCTGGACTTGGCATTGGCAATCTCTaGCGCTTGGCCTCCTGCTCTAGGGTTAGAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: LSNRSGLGIGNL*RLASCSRVRSM Trigger: CATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS CCA 72 bp | ACCGCTCTGGACTTGGCATTGGCAATCTCTGCCGCTTaGCCTCCTGCTCTAGGGTTAGAAGCATGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TALDLALAISAA*PPALGLEACFF Trigger: AAAGAAACATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS CAA 72 bp | AATCTACTACCTTATCTAACCGCTCTGGACTTGGCATaGGCAATCTCTGCCGCTTGGCCTCCTGCTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: NLLPYLTALDLA*AISAAWPPALG Trigger: CCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAAGGTAGTAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS CAA 90 bp | CATCCATGGAATCTACTACCTTATCTAACCGCTCTGGACTTGGCATaGGCAATCTCTGCCGCTTGGCCTCCTGCTCTAGGGTTAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: HPWNLLPYLTALDLA*AISAAWPPALGLEA Trigger: TGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAAGGTAGTAGATTCCATGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS CAA 90 bp | ACCTTATCTAACCGCTCTGGACTTGGCATTGGCAATCTCTGCCGCTaGGCCTCCTGCTCTAGGGTTAGAAGCATGTTTCTTTCTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: TLSNRSGLGIGNLCR*ASCSRVRSMFLSFS Trigger: ACTGAAAGAAAGAAACATGCTTCTAACCCTAGAGCAGGAGGCCAAGCGGCAGAGATTGCCAATGCCAAGTCCAGAGCGGTTAGATAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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| CDS GCA 72 bp | TTGTATCTTTTATTTAGGTGCCAAGGTATAACCCACTaGTTGAACTTGTGCCAGATGATTCTTCCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: LYLLFRCQGITH*LNLCQMILPKM Trigger: CATCTTTGGAAGAATCATCTGGCACAAGTTCAAGCAGTGGGTTATACCTTGGCACCTAAATAAAAGATACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000259038.6 ENST00000392659.2 ENST00000476781.6 |
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