Pregenerated sensors for MRPL45 (Homo sapiens)
Ensembl gene IDs: ENSG00000277936, ENSG00000278845Ensembl transcript IDs: ENST00000613510.1, ENST00000613675.5, ENST00000619548.1, ENST00000621878.4
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTCACATCGCTCACAAGTAGGCTCATCTTCCACTTCTGCCATCTaGAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KSHRSQVGSSSTSAI*RLVHAQPEPGEMCR Trigger: TCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGATGGCAGAAGTGGAAGATGAGCCTACTTGTGAGCGATGTGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCTGGCCATGTTATACCTaGCACCTGCTAGGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTWPCYT*HLLGPS Trigger: ACTGGGCCCTAGCAGGTGGCAGGTATAACATGGCCA...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCAAAGAGGATGCTGCTaGTTGTCTCTCACAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTQRGCC*LSLTVP Trigger: AGGGACTGTGAGAGACAACCAGCAGCATCCTCTTTG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCCCAGTCATCAGTCATaGTTGCTGATGATGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTPSHQS*LLMMRL Trigger: CAGTCTCATCATCAGCAACCATGACTGATGACTGGG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTGGCCATGTTATACCTaGCACCTGCTAGGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFWPCYT*HLLGPS Trigger: ACTGGGCCCTAGCAGGTGGCAGGTATAACATGGCCA...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCTTACAAAGAGGATGCTaGTGGTTGTCTCTCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTLQRGC*WLSLTV Trigger: GACTGTGAGAGACAACCAGCAGCATCCTCTTTGTAA...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCGTTCTTTTTATAGCATaGGGGGAATGGGAGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTVLFIA*GEWETS Trigger: TGAAGTCTCCCATTCCCCTCATGCTATAAAAAGAAC...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCTCACAGTCCCTGCTGTaGGAAAAACTGATATCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SEGWSMPSLNQGKCAELTSQSLL*EKLISN Trigger: ATTGGATATCAGTTTTTCCCACAGCAGGGACTGTGA...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTCCCAGTCATCAGTCATaGTTGCTGATGATGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFPSHQS*LLMMRL Trigger: CAGTCTCATCATCAGCAACCATGACTGATGACTGGG...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTTACAAAGAGGATGCTaGTGGTTGTCTCTCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFLQRGC*WLSLTV Trigger: GACTGTGAGAGACAACCAGCAGCATCCTCTTTGTAA...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTGTTCTTTTTATAGCATaGGGGGAATGGGAGACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFVLFIA*GEWETS Trigger: TGAAGTCTCCCATTCCCCTCATGCTATAAAAAGAAC...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTCACAGTCCCTGCTGTaGGAAAAACTGATATCCAAT | + |
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Preference number: 2 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFSQSLL*EKLISN Trigger: ATTGGATATCAGTTTTTCCCACAGCAGGGACTGTGA...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAGAGGATGCTGCTGGTaGTCTCTCACAGTCCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: SEGWSMPSLNQGKCAELTRGCCW*SLTVPA Trigger: AGCAGGGACTGTGAGAGACAACCAGCAGCATCCTCT...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTAGAGGATGCTGCTGGTaGTCTCTCACAGTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFRGCCW*SLTVPA Trigger: AGCAGGGACTGTGAGAGACAACCAGCAGCATCCTCT...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| 3UTR TCA 72 bp | CACTTCTGCCATCTGAAGGCTGGTCCATGCCCAGCCTaGACCAGGGGAAATGTGCAGAACTCACCAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: HFCHLKAGPCPA*TRGNVQNSPKF Trigger: AAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGATGGCAGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCGGTCCATGCCCAGCCTaGACCAGGGGAAATGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTGPCPA*TRGNVQ Trigger: CTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACC...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCTGAGTCACCAGAACTaGCTGCCGAGACCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTLSHQN*LPRPPA Trigger: GGCTGGTGGTCTCGGCAGCCAGTTCTGGTGACTCAG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000619548.1 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCGTCACCAGAACTGGCTaGCGAGACCACCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTVTRTG*RDHQPK Trigger: TTTGGGCTGGTGGTCTCGGCAGCCAGTTCTGGTGAC...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000619548.1 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAGAGTCTGCCGGGTGTaGATGCGTACGGTGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTRVCRV*MRTVIW Trigger: CCAGATCACCGTACGCATGCACACCCGGCAGACTCT...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCATGCGTACGGTGATCTaGCCGTACACGTTGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTMRTVI*PYTLPW Trigger: CCAGGGCAACGTGTACGGCCAGATCACCGTACGCAT...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCTGAGTCACCAGAACTaGCTGCCGAAACCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTLSHQN*LPKPPA Trigger: GGCTGGTGGTTTCGGCAGCCAGTTCTGGTGACTCAG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000621878.4 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCGTCACCAGAACTGGCTaGCGAAACCACCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTVTRTG*RNHQPK Trigger: TTTGGGCTGGTGGTTTCGGCAGCCAGTTCTGGTGAC...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000621878.4 |
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| CDS-3UTR TCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTGGTCCATGCCCAGCCTaGACCAGGGGAAATGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFGPCPA*TRGNVQ Trigger: CTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACC...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR TCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTGTGCATGCGTACGGTaGTCTGGCCGTACACGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFCACVR*SGRTRC Trigger: GCAACGTGTACGGCCAGATCACCGTACGCATGCACA...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTGTCACCAGAACTGGCTaGCGAGACCACCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFVTRTG*RDHQPK Trigger: TTTGGGCTGGTGGTCTCGGCAGCCAGTTCTGGTGAC...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000619548.1 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTAGAGTCTGCCGGGTGTaGATGCGTACGGTGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFRVCRV*MRTVIW Trigger: CCAGATCACCGTACGCATGCACACCCGGCAGACTCT...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCCGTACACGTTGCCCTaGTTCATCATACTTGAACAG | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTPYTLP*FIILEQ Trigger: CTGTTCAAGTATGATGAACCAGGGCAACGTGTACGG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTATGCGTACGGTGATCTaGCCGTACACGTTGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFMRTVI*PYTLPW Trigger: CCAGGGCAACGTGTACGGCCAGATCACCGTACGCAT...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000613675.5 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTCTGAGTCACCAGAACTaGCTGCCGAAACCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFLSHQN*LPKPPA Trigger: GGCTGGTGGTTTCGGCAGCCAGTTCTGGTGACTCAG...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCCAAACCGGTCATAGATaGCCAGAGTTGGAAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTQTGHR*PELENS Trigger: ACTGTTTTCCAACTCTGGCCATCTATGACCGGTTTG...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000619548.1 |
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| CDS-3UTR GCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCGAACCAGGGGAAATGTaGAGAACTCACCAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTEPGEM*RTHQNF Trigger: AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTC...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCATAGATGGCCAGAGTTaGAAAACAGTGTTCAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SEGWSMPSLNQGKCAELTIDGQS*KTVFSY Trigger: GTAACTGAACACTGTTTTCCAACTCTGGCCATCTAT...GGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000619548.1 |
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| CDS-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTCAAAGAGGATGCTGCTaGTTGTCTCTCACAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFQRGCC*LSLTVP Trigger: AGGGACTGTGAGAGACAACCAGCAGCATCCTCTTTG...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR GCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTGAACCAGGGGAAATGTaGAGAACTCACCAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFEPGEM*RTHQNF Trigger: AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTC...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENST00000613510.1 ENST00000613675.5 ENST00000619548.1 ENST00000621878.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTATAGATGGCCAGAGTTaGAAAACAGTGTTCAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFIDGQS*KTVFSY Trigger: GTAACTGAACACTGTTTTCCAACTCTGGCCATCTAT...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000619548.1 |
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| CDS-3UTR CAA 90 bp | CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTCATAGATGGCCAGAGTaGGAAAACAGTGTTCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LVHAQPEPGEMCRTHQNFHRWPE*ENSVQL Trigger: TAACTGAACACTGTTTTCCAACTCTGGCCATCTATG...AAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000613510.1 ENST00000619548.1 |
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