RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL42 (Homo sapiens)

Ensembl gene IDs: ENSG00000198015

Ensembl transcript IDs: ENST00000358678.7, ENST00000393128.8, ENST00000547098.5, ENST00000548545.1, ENST00000549561.6, ENST00000549982.6, ENST00000552217.6

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGCCCAGGAGTCCATCGTGCTTCCGTTCCAGCCCATCCTCCATaGTCTCCCTGTAGCCAGAGTGAAGGCTCTGAATGCATCATCCCC +
Preference number: 1 (lower is better)
Translates to: VCPGVHRASVPAHPP*SPCSQSEGSECIIP
Trigger: GGGGATGATGCATTCAGAGCCTTCACTCTGGCTACAGGGAGACCATGGAGGATGGGCTGGAACGGAAGCACGATGGACTCCTGGGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 90 bp ATTATCATTTGTCAGCTGAATGACTCCATCAGTCACTTAACGGTGTaGCCAGGAGTCCATCGTGCTTCCGTTCCAGCCCATCCTCCATGG +
Preference number: 1 (lower is better)
Translates to: IIICQLNDSISHLTV*PGVHRASVPAHPPW
Trigger: CCATGGAGGATGGGCTGGAACGGAAGCACGATGGACTCCTGGGCACACCGTTAAGTGACTGATGGAGTCATTCAGCTGACAAATGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 90 bp TGGTCTCCCTGTAGCCAGAGTGAAGGCTCTGAATGCATCATCCCCTaGCAAAAATCTTCTTTGGTTACATTACCAGCTGTTACTAACATT +
Preference number: 1 (lower is better)
Translates to: WSPCSQSEGSECIIP*QKSSLVTLPAVTNI
Trigger: AATGTTAGTAACAGCTGGTAATGTAACCAAAGAAGATTTTTGGCAGGGGATGATGCATTCAGAGCCTTCACTCTGGCTACAGGGAGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 90 bp CCAAAACTTGGAAGCAATCAACCAAGATGTCCTTCAGCAGGTGAATaGATAAACTGTTGTACACCCAGACAATGGAGTATTACTCGATGC +
Preference number: 1 (lower is better)
Translates to: PKLGSNQPRCPSAGE*INCCTPRQWSITRC
Trigger: GCATCGAGTAATACTCCATTGTCTGGGTGTACAACAGTTTATCCATTCACCTGCTGAAGGACATCTTGGTTGATTGCTTCCAAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 90 bp GGTTTTAGTAGTAAATATATGATTTCAGGGGCACATCCAGTGGAATaGTGGAGTCAGTGCACAACAACTTGTAAGACCCAGTCATGGAAA +
Preference number: 1 (lower is better)
Translates to: GFSSKYMISGAHPVE*WSQCTTTCKTQSWK
Trigger: TTTCCATGACTGGGTCTTACAAGTTGTTGTGCACTGACTCCATCATTCCACTGGATGTGCCCCTGAAATCATATATTTACTACTAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 90 bp TCTATCTTCTATGCTCTTATGGTAATTACACCTGGATGCAGCAATTaGAAAGTCCAATGGGATCAATCCAAATTGCCACACTTAACCATG +
Preference number: 1 (lower is better)
Translates to: SIFYALMVITPGCSN*KVQWDQSKLPHLTM
Trigger: CATGGTTAAGTGTGGCAATTTGGATTGATCCCATTGGACTTTTCAATTGCTGCATCCAGGTGTAATTACCATAAGAGCATAGAAGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 90 bp AAGCTCCTTAATTTAGGTAATTATTCCGGAATGTTCTCTTACCACTaGTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACA +
Preference number: 1 (lower is better)
Translates to: KLLNLGNYSGMFSYH*CYPSNWIPTKLQTT
Trigger: TGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTAAGAGAACATTCCGGAATAATTACCTAAATTAAGGAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 90 bp AGAATTCAAGCAGTCATGGCTGTGAAGCATTTCTGCAGAAGGATATaGTATGTAAGTATGAGGTTGTTACTAAATCAAAATGAATGCCTT +
Preference number: 1 (lower is better)
Translates to: RIQAVMAVKHFCRRI*YVSMRLLLNQNECL
Trigger: AAGGCATTCATTTTGATTTAGTAACAACCTCATACTTACATAGCATATCCTTCTGCAGAAATGCTTCACAGCCATGACTGCTTGAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCACAGGTTCTTATCCCTaGGGGACGGGGGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSTGSYP*GTGEEQ
Trigger: CTGTTCCTCCCCCGTCCCCCAGGGATAAGAACCTGT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSRRRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCCCACTGCAACCTCCGCCT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAAATTAAGCCCTGGGTaGGAGTGCCCTCTGGTGGTT +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSKLSPG*ECPLVV
Trigger: AACCACCAGAGGGCACTCTCACCCAGGGCTTAATTT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGGTGAGAGTGCCCTCTaGTGGTTTCCCAATAATGCT +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSGESAL*WFPNNA
Trigger: AGCATTATTGGGAAACCACCAGAGGGCACTCTCACC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCCTGATGTTAGGAGTATaGAGTTTAGGCCAGGCATGG +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSLMLGV*SLGQAW
Trigger: CCATGCCTGGCCTAAACTGCATACTCCTAACATCAG...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAGGCACATTTCTCTTTaGTTCCCCCAGGAACCTCCG +
Preference number: 2 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRRHISL*FPQEPP
Trigger: CGGAGGTTCCTGGGGGAATCAAAGAGAAATGTGCCT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCATGGCTGAGCTCAATTaGGAGTATCTTTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSMAELN*EYLSLV
Trigger: CACCAAAGAAAGATACTCCCAATTGAGCTCAGCCAT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGTGGGTGGATCGCTTTaGGCCCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEVGGSL*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAAGCGATCCACCCAC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLGRRIT*TREVEA
Trigger: AGCCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGACCTGCTCCACTTCTaGCGCTCCTTAGGCAACTCT +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPDLLHF*RSLGNS
Trigger: AGAGTTGCCTAAGGAGCGTCAGAAGTGGAGCAGGTC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTACCAATGTGCCACTCTaGTGGGGGATGGTGATGAGG +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPTNVPL*WGMVMR
Trigger: CCTCATCACCATCCCCCAGCAGAGTGGCACATTGGT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAAGGTGTGTGGACACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCERCVDT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGTCCACACACCT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCCGGGAGGTGGAGGCTaGAGTGAGCCAAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYPGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAGCCTCCACCTCCCGG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCCACTGGCCACTGTACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: SVILGKSISVFGSVSKSVHWPLY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTACAGTGGCCAGTG...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGGATGCCGGACATGGTaGTTCAACGATTGCACTTAC +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPGCRTW*FNDCTY
Trigger: GTAAGTGCAATCGTTGAATCACCATGTCCGGCATCC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCAGCAGGTGGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SVILGKSISVFGSVSKSVSRWIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGTGCAAACACCTGATTaGCATAGCTCACTACAACCC +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPVQTPD*HSSLQP
Trigger: GGGTTGTAGTGAGCTATGTCAATCAGGTGTTTGCAC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCACTGGCCACTGTACTaGACTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLHWPLY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTACAGTGGCCAGTG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTATGGAGCCTGATAGTTTaGCTCCTGGCTCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLWSLIV*LLALPL
Trigger: AAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCA...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGTTCAAATTAAGCCCTaGGTGAGAGTGCCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEVQIKP*VRVPSG
Trigger: ACCAGAGGGCACTCTCACCCAGGGCTTAATTTGAAC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCCTGAGATCATGCCACTaGCCACTGTACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: SVILGKSISVFGSVSKSVLRSCH*PLYCTP
Trigger: TGGAGTGCAGTACAGTGGCCAGTGGCATGATCTCAG...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAACTGATGTTAGGAGTATaGAGTTTAGGCCAGGCATGG +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCELMLGV*SLGQAW
Trigger: CCATGCCTGGCCTAAACTGCATACTCCTAACATCAG...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCAGGAATTTCATAGATaGCCCTACCCCAAATCCCAT +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPQEFHR*PYPKSH
Trigger: ATGGGATTTGGGGTAGGGGCATCTATGAAATTCCTG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTTCACCCAGACTGGAGTaGAGTGGTGTGATCTTGGCC +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLSPRLE*SGVILA
Trigger: GGCCAAGATCACACCACTGCACTCCAGTCTGGGTGA...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAATGGCTTTGGCACTATaGAAAAGTCCTAAATTGGAG +
Preference number: 2 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKMALAL*KSPKLE
Trigger: CTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCAT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCCATTGCATTCCAGCTTaGGCAGAGCAAACCTCCATC +
Preference number: 2 (lower is better)
Translates to: SVILGKSISVFGSVSKSVHCIPA*AEQTSI
Trigger: GATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATG...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 90 bp AAAGCTTTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTaGGGTAAGGTTCGAGTCACTGTAAAATGTAATTATACTCCCTTT +
Preference number: 2 (lower is better)
Translates to: KALEPDSLAPGSPTC*GKVRVTVKCNYTPF
Trigger: AAAGGGAGTATAATTACATTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAAAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATTTGCCCAGGCTGCAGTaGAGTGGCTATTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYLPRLQ*SGYSQV
Trigger: CACCTGTGAATAGCCACTGCACTGCAGCCTGGGCAA...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATGGAGGCCAAGGTGTGTaGACACTTGAGGTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYGGQGV*TLEVRS
Trigger: ACTCCTGACCTCAAGTGTCCACACACCTTGGCCTCC...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTGCAGATCACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLADHLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCCCACCTCAGGTGATCTGC...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAGAGCTGCAGCTGTTTaGATGTGTTCTAAAGCTAGC +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLRAAAV*MCSKAS
Trigger: GCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCCACACGTGCTATCTTaGATATCACTATCATTTCAG +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPPHVLS*ISLSFQ
Trigger: CTGAAATGATAGTGATATGCAAGATAGCACGTGTGG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCCCAGTCATGGAAACTaGCAAACATTACAAGTTAGA +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPPSHGN*QTLQVR
Trigger: TCTAACTTGTAATGTTTGCCAGTTTCCATGACTGGG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCAGGGGCACATCCAGTaGAATGATGGAGTCAGTGCA +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYQGHIQ*NDGVSA
Trigger: TGCACTGACTCCATCATTCCACTGGATGTGCCCCTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCAGGCTGCAGTGCAGTaGCTATTCACAGGTGTGATC +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYQAAVQ*LFTGVI
Trigger: GATCACACCTGTGAATAGCCACTGCACTGCAGCCTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCATTGCATTCCAGCTTaGGCAGAGCAAACCTCCATC +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVHCIPA*AEQTSI
Trigger: GATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACTTATTCACTGCTGGTaGGAATGCAAAATGGTACAG +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLLIHCW*ECKMVQ
Trigger: CTGTACCATTTTGCATTCCCACCAGCAGTGAATAAG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTAAAATAAATGTGATGTaGATGAGCTGTCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPKINVM*MSCLSR
Trigger: TCTGCTCAGACAGCTCATCCACATCACATTTATTTT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 90 bp TACAGGCAAGTAGAATTAGGGCATGATGTGACAGACTGTAATGAGTaGCTGAGAAACTACATACTCTATCCCCAGGAAAACACATATTCT +
Preference number: 2 (lower is better)
Translates to: YRQVELGHDVTDCNE*LRNYILYPQENTYS
Trigger: AGAATATGTGTTTTCCTGGGGATAGAGTATGTAGTTTCTCAGCAACTCATTACAGTCTGTCACATCATGCCCTAATTCTACTTGCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAACTGTAATGAGTTGCTaGGAAACTACATACTCTATC +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCETVMSC*ETTYSI
Trigger: GATAGAGTATGTAGTTTCTCAGCAACTCATTACAGT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATTACATATTGTTCCTaGGTATTCCTTCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLITYCS*VFLPSA
Trigger: TGCACTGGGAAGGAATACTCAGGAACAATATGTAAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATGGTACAACCACTTTaGAAAAAGCGTTTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLMVQPL*KKRFGS
Trigger: ACTGCCAAAACGCTTTTTGCAAAGTGGTTGTACCAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATGGCTTTGGCACTATaGAAAAGTCCTAAATTGGAG +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLMALAL*KSPKLE
Trigger: CTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTATGGTAATTACACCTaGATGCAGCAATTGAAAAGT +
Preference number: 2 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPYGNYT*MQQLKS
Trigger: ACTTTTCAATTGCTGCATCCAGGTGTAATTACCATA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAACTGTAATGAGTTGCTaGGAAACTACATACTCTATC +
Preference number: 2 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLTVMSC*ETTYSI
Trigger: GATAGAGTATGTAGTTTCTCAGCAACTCATTACAGT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCCAGTGTTTGTGGGCTaGTATTCAACTCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVPVFVG*YSTHLL
Trigger: CAGAAGATGAGTTGAATATCAGCCCACAAACACTGG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTGATAGCCTTATGAAGTaGTATTGTGCCAGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLDSLMK*YCASSE
Trigger: CTCAGAACTGGCACAATATCACTTCATAAGGCTATC...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTACTCCAACTGGGTTCTaGCAAACATACCATGTGCAT +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVTPTGF*QTYHVH
Trigger: ATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATACTCCAACTGGGTTCTaGCAAACATACCATGTGCAT +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYTPTGF*QTYHVH
Trigger: ATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCAGGAATTTCATAGATaGCCCTACCCCAAATCCCAT +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYQEFHR*PYPKSH
Trigger: ATGGGATTTGGGGTAGGGGCATCTATGAAATTCCTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAAGTATTCCTTCCCAGTaGATTCAAAATATTCTCACA +
Preference number: 2 (lower is better)
Translates to: QELIYKQHDKNSSSHGCESIPSQ*IQNILT
Trigger: TGTGAGAATATTTTGAATGCACTGGGAAGGAATACT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGATGGCTTTGGCACTATaGAAAAGTCCTAAATTGGAG +
Preference number: 2 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKMALAL*KSPKLE
Trigger: CTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCAT...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTACCCTTATTCACTGCTaGTGGGAATGCAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLTLIHC*WECKMV
Trigger: TACCATTTTGCATTCCCACCAGCAGTGAATAAGGGT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTGAATTTAATAAGAATTaGTGGAAGGGGCCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLEFNKN*WKGPSR
Trigger: TCTGCTAGGCCCCTTCCATCAATTCTTATTAAATTC...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATTGTCCTGTGGAGACATaGCAATGTAAACCCATAAAC +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYCPVET*QCKPIN
Trigger: GTTTATGGGTTTACATTGTCATGTCTCCACAGGACA...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATATTTCACCAAAGATATaGGTGCCCAACAAGTACCTG +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYISPKI*VPNKYL
Trigger: CAGGTACTTGTTGGGCACTCATATCTTTGGTGAAAT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTATATTGAGGTTGCAGTaGAATGTGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVILRLQ*NVIVPL
Trigger: CAGTGGCACAATCACATTGCACTGCAACCTCAATAT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCCACACGTGCTATCTTaGATATCACTATCATTTCAG +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLPHVLS*ISLSFQ
Trigger: CTGAAATGATAGTGATATGCAAGATAGCACGTGTGG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTTGTGGAAACCACACGTaGTATCTTGCATATCACTAT +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLCGNHT*YLAYHY
Trigger: ATAGTGATATGCAAGATAGCACGTGTGGTTTCCACA...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCAGTATTCCTTCCCAGTaGATTCAAAATATTCTCACA +
Preference number: 2 (lower is better)
Translates to: SVILGKSISVFGSVSKSVSIPSQ*IQNILT
Trigger: TGTGAGAATATTTTGAATGCACTGGGAAGGAATACT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCCCAGTCATGGAAACTaGCAAACATTACAAGTTAGA +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLPSHGN*QTLQVR
Trigger: TCTAACTTGTAATGTTTGCCAGTTTCCATGACTGGG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTTGTAAGACCCAGTCATaGAAACTGGCAAACATTACA +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVCKTQS*KLANIT
Trigger: TGTAATGTTTGCCAGTTTCCATGACTGGGTCTTACA...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCCTAATTACAAACTCTaGTTAAGTGCTATGGAGAGA +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVPNYKL*LSAMER
Trigger: TCTCTCCATAGCACTTAATCAGAGTTTGTAATTAGG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTATTATGGTAAAGGGCTaGAAAGGAAATAAGCCCATA +
Preference number: 2 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVIMVKG*KGNKPI
Trigger: TATGGGCTTATTTCCTTTGCAGCCCTTTACCATAAT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTAATCAGAAAATAAGGTaGAGTGTCTCTGAATGCATA +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLNQKIR*SVSECI
Trigger: TATGCATTCAGAGACACTCCACCTTATTTTCTGATT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCAAGAATATAGCAATTaGAACTTTCATTCATGGTGG +
Preference number: 2 (lower is better)
Translates to: HVITICSNSGLSSFYLLLQEYSN*NFHSWW
Trigger: CCACCATGAATGAAAGTTCCAATTGCTATATTCTTG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATTCATTAGTACATCACTaGACACATCTATTGCTAAAG +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYSLVHH*THLLLK
Trigger: CTTTAGCAATAGATGTGTCCAGTGATGTACTAATGA...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCAAGAATATAGCAATTaGAACTTTCATTCATGGTGG +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYQEYSN*NFHSWW
Trigger: CCACCATGAATGAAAGTTCCAATTGCTATATTCTTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATATAATTGCCAAAACTTaGAAGCAATCAACCAAGATG +
Preference number: 2 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYIIAKT*KQSTKM
Trigger: CATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTAT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGCTGAGGCAGGAGAATaGCTTGAGCCTATGAGGCGG +
Preference number: 3 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSAEAGE*LEPMRR
Trigger: CCGCCTCATAGGCTCAAGCAATTCTCCTGCCTCAGC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp CTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTaGATGGGCAAGTCCAGCCAAGATAAGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LASLNNPTSDLS*MGKSSQDKLSW
Trigger: CCAGCTCAGCTTATCTTGGCTGGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp CTCAACACTTGTGGGGGCCGAGATGGGAGGATCACTTaGGACCAGGAGTTTGATACCAACCTGGGTAACACA +
Preference number: 3 (lower is better)
Translates to: LNTCGGRDGRIT*DQEFDTNLGNT
Trigger: TGTGTTACCCAGGTTGGTATCAAACTCCTGGTCTCAAGTGATCCTCCCATCTCGGCCCCCACAAGTGTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp TTGAGACGGAATCTCGTTTTATCACCCAGACTGGAGTaGAGTGGTGTGATCTTGGCCCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: LRRNLVLSPRLE*SGVILAHCNLC
Trigger: GCAGAGGTTGCAGTGGGCCAAGATCACACCACTGCACTCCAGTCTGGGTGATAAAACGAGATTCCGTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp AGGCACAAGAATCGCTTGAGCTTGGGAGGTGGAGGTTaGAATGAACCGAGATTGACAGAGGAGACGCCATCT +
Preference number: 3 (lower is better)
Translates to: RHKNRLSLGGGG*NEPRLTEETPS
Trigger: AGATGGCGTCTCCTCTGTCAATCTCGGTTCATTGCAACCTCCACCTCCCAAGCTCAAGCGATTCTTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp CCCCAGGTGACAGTCACTCAATACCAGACATATGAGTaGCACCATCTAGGACTAGCCAGCCTCAACAACCCA +
Preference number: 3 (lower is better)
Translates to: PQVTVTQYQTYE*HHLGLASLNNP
Trigger: TGGGTTGTTGAGGCTGGCTAGTCCTAGATGGTGTCACTCATATGTCTGGTATTGAGTGACTGTCACCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTTGGAGCCTGATAGTTaGGCTCCTGGCTCTCCCACT +
Preference number: 3 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPLEPDS*APGSPT
Trigger: AGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp AGCTGCATGGGCAAGTCCAGCCAAGATAAGCTGAGCTaGATCCAGACTATAAGAATTACCTGGAAGAACGCA +
Preference number: 3 (lower is better)
Translates to: SCMGKSSQDKLS*IQTIRITWKNA
Trigger: TGCGTTCTTCCAGGTAATTCTTATAGTCTGGATCCAGCTCAGCTTATCTTGGCTGGACTTGCCCATGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGGCTCTCCCACTTGTTaGGGTAAGGTTCGAGTCACT +
Preference number: 3 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPGSPTC*GKVRVT
Trigger: AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAATTGGAGCCTGATAGTTaGGCTCCTGGCTCTCCCACT +
Preference number: 3 (lower is better)
Translates to: QELIYKQHDKNSSSHGCELEPDS*APGSPT
Trigger: AGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCCATTGCATTCCAGCTaGGGCAGAGCAAACCTCCAT +
Preference number: 3 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPPLHSS*GRANLH
Trigger: ATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATGG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTATGCAGTGGTGTGATCTaGGCCCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLCSGVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGGGCCAAGATCACACCACTGCA...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCTTGAGCCCAGGATATaGAGGTTGCAGTGCAATGTG +
Preference number: 3 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPLEPRI*RLQCNV
Trigger: CACATTGCACTGCAACCTCAATATCCTGGGCTCAAG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp AAAGTCACTTTTGGGCGAGATGTTCAAATTAAGCCCTaGGTGAGAGTGCCCTCTGGTGGTTTCCCAATAATG +
Preference number: 3 (lower is better)
Translates to: KVTFGRDVQIKP*VRVPSGGFPIM
Trigger: CATTATTGGGAAACCACCAGAGGGCACTCTCACCCAGGGCTTAATTTGAACATCTCGCCCAAAAGTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp GGGATGGTCATAGCAAGATACTTTGTCAATCAGGAATaGGGGCTATCTTTGAACCCACAGTGGCTTGAACTC +
Preference number: 3 (lower is better)
Translates to: GMVIARYFVNQE*GLSLNPQWLEL
Trigger: GAGTTCAAGCCACTGTGGGTTCAAAGATAGCCCTCATTCCTGATTGACAAAGTATCTTGCTATGACCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp CTCTCCTCTTACTCCCTTGAATCTGAGATAGCCTTATaGAGTGATATTGTGCCAGTTCTGAGACTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LSSYSLESEIAL*SDIVPVLRLGL
Trigger: GAGGCCTAGTCTCAGAACTGGCACAATATCACTTCATAAGGCTATCTCAGATTCAAGGGAGTAAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp TTCCTTAATCCAGGCCATTATCATTTGTCAGCTGAATaGCTCCATCAGTCACTTAACGGTGTGCCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: FLNPGHYHLSAE*LHQSLNGVPRS
Trigger: ACTCCTGGGCACACCGTTAAGTGACTGATGGAGTCATTCAGCTGACAAATGATAATGGCCTGGATTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATCAGCACAGGAGTTTaGACCTGCTCCACTTCTGAC +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLISTGV*TCSTSD
Trigger: GTCAGAAGTGGAGCAGGTCAAAACTCCTGTGCTGAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp TCCCGAAAAGGAATCAAGAAGGGTGGAGAGTGTATCTaGAGAAGGAATCAGCTGAGTTTGGAGACTATTTTG +
Preference number: 3 (lower is better)
Translates to: SRKGIKKGGECI*RRNQLSLETIL
Trigger: CAAAATAGTCTCCAAACTCAGCTGATTCCTTCTGCAGATACACTCTCCACCCTTCTTGATTCCTTTTCGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp GGATTTCCTTTGGATGCTGGGAAACAAAACTCCAACTaGGTTCTGACAAACATACCATGTGCATTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: GFPLDAGKQNSN*VLTNIPCALSC
Trigger: ACAGGACAATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGTTTTGTTTCCCAGCATCCAAAGGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACCCAGGATATTGAGGTaGCAGTGCAATGTGATTGTG +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLPRILR*QCNVIV
Trigger: CACAATCACATTGCACTGCAACCTCAATATCCTGGG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp AGTAAATATATGATTTCAGGGGCACATCCAGTGGAATaGTGGAGTCAGTGCACAACAACTTGTAAGACCCAG +
Preference number: 3 (lower is better)
Translates to: SKYMISGAHPVE*WSQCTTTCKTQ
Trigger: CTGGGTCTTACAAGTTGTTGTGCACTGACTCCATCATTCCACTGGATGTGCCCCTGAAATCATATATTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp ACAAAACTCCAACTGGGTTCTGACAAACATACCATGTaGATTGTCCTGTGGAGACATGACAATGTAAACCCA +
Preference number: 3 (lower is better)
Translates to: TKLQLGSDKHTM*IVLWRHDNVNP
Trigger: TGGGTTTACATTGTCATGTCTCCACAGGACAATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp AGGCAGAGCCAAGGGTTTTTAGGACAGTGTAGACTCTaGATGACTATAAAGATGGATACATGTCATTGTACC +
Preference number: 3 (lower is better)
Translates to: RQSQGFLGQCRL*MTIKMDTCHCT
Trigger: GGTACAATGACATGTATCCATCTTTATAGTCATGCAGAGTCTACACTGTCCTAAAAACCCTTGGCTCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp AATTTGGGATTGGGAGAGGGTCTAAGGAAACGGGTTTaGTCCAGATTGGATACTATCAGAAAGAAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: NLGLGEGLRKRV*SRLDTIRKKEN
Trigger: ATTCTCCTTCTTTCTGATAGTATCCAATCTGGAGCAAACCCGTTTCCTTAGACCCTCTCCCAATCCCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp GGAAGCAATCAACCAAGATGTCCTTCAGCAGGTGAATaGATAAACTGTTGTACACCCAGACAATGGAGTATT +
Preference number: 3 (lower is better)
Translates to: GSNQPRCPSAGE*INCCTPRQWSI
Trigger: AATACTCCATTGTCTGGGTGTACAACAGTTTATCCATTCACCTGCTGAAGGACATCTTGGTTGATTGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTACCACACGTGCTATCTaGCATATCACTATCATTTCA +
Preference number: 3 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPTTRAI*HITIIS
Trigger: TGAAATGATAGTGATATGCAAGATAGCACGTGTGGT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGCTTACTACCAGTGTTaGTGGGCTGATATTCAACTC +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLAYYQC*WADIQL
Trigger: GAGTTGAATATCAGCCCACAAACACTGGTAGTAAGC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTGAATCCAGGCCTAGCTaGCTGGATGATGAGAGACAC +
Preference number: 3 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVESRPS*LDDERH
Trigger: GTGTCTCTCATCATCCAGCAAGCTAGGCCTGGATTC...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp ACTACATTTATGCTGAACTTAGTGCAAACACCTGATTaGCATAGCTCACTACAACCCAGAACTTCTGGACTC +
Preference number: 3 (lower is better)
Translates to: TTFMLNLVQTPD*HSSLQPRTSGL
Trigger: GAGTCCAGAAGTTCTGGGTTGTAGTGAGCTATGTCAATCAGGTGTTTGCACTAAGTTCAGCATAAATGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp AACACACAACATAGGGAACCATGGGGTGTCTCAGTATaGGAGTGTTTAGAAGAACCTAGTATAGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: NTQHREPWGVSV*ECLEEPSIEFG
Trigger: CCCAAATTCTATACTAGGTTCTTCTAAACACTCTCATACTGAGACACCCCATGGTTCCCTATGTTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAAGAAGAGACTAATTTaGACTAGAGGGGAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLKKRLI*TRGERR
Trigger: CCTTCTTTCCCCTCTAGTCAAAATTAGTCTCTTCTT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp TATGCTCTTATGGTAATTACACCTGGATGCAGCAATTaGAAAGTCCAATGGGATCAATCCAAATTGCCACAC +
Preference number: 3 (lower is better)
Translates to: YALMVITPGCSN*KVQWDQSKLPH
Trigger: GTGTGGCAATTTGGATTGATCCCATTGGACTTTTCAATTGCTGCATCCAGGTGTAATTACCATAAGAGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCACTTCACTGGCCACTaGAAACTTCTAGAGTTCCTT +
Preference number: 3 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVHFTGH*KLLEFL
Trigger: AAGGAACTCTAGAAGTTTCAAGTGGCCAGTGAAGTG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTGCTTACTACCAGTGTTaGTGGGCTGATATTCAACTC +
Preference number: 3 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVAYYQC*WADIQL
Trigger: GAGTTGAATATCAGCCCACAAACACTGGTAGTAAGC...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACATGTCATTGTACCTTaGTTCAAACCCATAGATTGT +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLHVIVP*FKPIDC
Trigger: ACAATCTATGGGTTTGAACAAAGGTACAATGACATG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACATTCAATCCAACAATaGTGCTCTTTGGTATTTACC +
Preference number: 3 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLHSIQQ*CSLVFT
Trigger: GGTAAATACCAAAGAGCACAATTGTTGGATTGAATG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp CGATTCTATCTTCTATGCTCTTATGGTAATTACACCTaGATGCAGCAATTGAAAAGTCCAATGGGATCAATC +
Preference number: 3 (lower is better)
Translates to: RFYLLCSYGNYT*MQQLKSPMGSI
Trigger: GATTGATCCCATTGGACTTTTCAATTGCTGCATCCAGGTGTAATTACCATAAGAGCATAGAAGATAGAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CCA 72 bp GCTCTGAATGCATCATCCCCTGCCAAAAATCTTCTTTaGTTACATTACCAGCTGTTACTAACATTTAAATGG +
Preference number: 3 (lower is better)
Translates to: ALNASSPAKNLL*LHYQLLLTFKW
Trigger: CCATTTAAATGTTAGTAACAGCTGGTAATGTAACCAAAGAAGATTTTTGGCAGGGGATGATGCATTCAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp CAACAATTGTGCTCTTTGGTATTTACCCAAAGGAGTTaGAAGCTTAAATGGACACAAAAACCTACACATGGA +
Preference number: 3 (lower is better)
Translates to: QQLCSLVFTQRS*KLKWTQKPTHG
Trigger: TCCATGTGTAGGTTTTTGTGTCCATTTAAGCTTTCAACTCCTTTGGGTAAATACCAAAGAGCACAATTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp GCAGTCATGGCTGTGAAGCATTTCTGCAGAAGGATATaGTATGTAAGTATGAGGTTGTTACTAAATCAAAAT +
Preference number: 3 (lower is better)
Translates to: AVMAVKHFCRRI*YVSMRLLLNQN
Trigger: ATTTTGATTTAGTAACAACCTCATACTTACATAGCATATCCTTCTGCAGAAATGCTTCACAGCCATGACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp AATTTAGGTAATTATTCCGGAATGTTCTCTTACCACTaGTGCTATCCATCCAATTGGATTCCTACAAAGCTT +
Preference number: 3 (lower is better)
Translates to: NLGNYSGMFSYH*CYPSNWIPTKL
Trigger: AAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTAAGAGAACATTCCGGAATAATTACCTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTGAGAGATATACAGTGTaGCACGTAACAACAGAATCT +
Preference number: 3 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVERYTV*HVTTES
Trigger: AGATTCTGTTGTTACGTGCAACACTGTATATCTCTC...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATACAGACTGTAATGAGTaGCTGAGAAACTACATACTC +
Preference number: 3 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYTDCNE*LRNYIL
Trigger: GAGTATGTAGTTTCTCAGCAACTCATTACAGTCTGT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCATAATTGCCAAAACTaGGAAGCAATCAACCAAGAT +
Preference number: 3 (lower is better)
Translates to: HVITICSNSGLSSFYLLLHNCQN*EAINQD
Trigger: ATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTATG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCAAATCGATTACGTTTaGGTGACAACTATTGTGAAG +
Preference number: 3 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYQIDYV*VTTIVK
Trigger: CTTCACAATAGTTGTCACCAAAACGTAATCGATTTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp CCAGATTGGATACTATCAGAAAGAAGGAGAATTTCATaGTTATCTCAATACATCTTCTCTATAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: PDWILSERRRIS*LSQYIFSIGKA
Trigger: TGCCTTCCCTATAGAGAAGATGTATTGAGATAATCATGAAATTCTCCTTCTTTCTGATAGTATCCAATCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp TTGAAGATGCCTCTTAGAATATGTGGAAACCACACGTaGTATCTTGCATATCACTATCATTTCAGTTCTAAT +
Preference number: 3 (lower is better)
Translates to: LKMPLRICGNHT*YLAYHYHFSSN
Trigger: ATTAGAACTGAAATGATAGTGATATGCAAGATAGCACGTGTGGTTTCCACATATTCTAAGAGGCATCTTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR GCA 72 bp TTAAGATGTCTTTCAGCTTTACGATTCTATCTTCTATaGTCTTATGGTAATTACACCTGGATGCAGCAATTG +
Preference number: 3 (lower is better)
Translates to: LRCLSALRFYLL*SYGNYTWMQQL
Trigger: CAATTGCTGCATCCAGGTGTAATTACCATAAGAGCATAGAAGATAGAATCGTAAAGCTGAAAGACATCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR TCA 72 bp TTGTGCAAAACTAGAAAGCACATTACATATTGTTCCTaGGTATTCCTTCCCAGTGCATTCAAAATATTCTCA +
Preference number: 3 (lower is better)
Translates to: LCKTRKHITYCS*VFLPSAFKIFS
Trigger: TGAGAATATTTTGAATGCACTGGGAAGGAATACTCAGGAACAATATGTAATGTGCTTTCTAGTTTTGCACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTGATGAGGGAGGCATaGGGGAGGGGAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRVMREA*GRGALR
Trigger: CCTCAGTGCTCCCCTCCCCCATGCCTCCCTCATCAC...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTGRRIT*TREVEA
Trigger: AGCCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGTAATCCCAGTATTTTaGGGGGCCAAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSVIPVF*GAKVGR
Trigger: TCTGCCCACCTTGGCCCCCCAAAATACTGGGATTAC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGACACTGGCCACTGTACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRHWPLY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTACAGTGGCCAGTG...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCCGGGAGGTGGAGGCTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKPGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAGCCTCCACCTCCCGG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAAAATCAGCCAGGCATaGTGGTGCACGCTCATAATC +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSKISQA*WCTLII
Trigger: GATTATGAGCGTGCACCAGCATGCCTGGCTGATTTT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAGGCACATTTCTCTTTaGTTCCCCCAGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTRHISL*FPQEPP
Trigger: CGGAGGTTCCTGGGGGAATCAAAGAGAAATGTGCCT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAAGCACATTCTTGGGTaGAAGAAAACCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSKHILG*KKTTPL
Trigger: CAAAGGGGTGGTTTTCTTTCACCCAAGAATGTGCTT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAGGTGGAGGTTGCAGTaGGCTGAGAATGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTRWRLQ*AENVPL
Trigger: TAGTGGCACATTCTCAGCTCACTGCAACCTCCACCT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGGAACCCTTATTCACTaGTGGTGGGAATGCAAAATG +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSGTLIH*WWECKM
Trigger: CATTTTGCATTCCCACCAGCAGTGAATAAGGGTTCC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTTGAGGCACGAAAATTaGTTGAATCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSLRHEN*LNPGGR
Trigger: TCTGCCTCCTGGATTCAAGCAATTTTCGTGCCTCAA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTAATCCCAGTATTTTaGGGGGCCAAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRVIPVF*GAKVGR
Trigger: TCTGCCCACCTTGGCCCCCCAAAATACTGGGATTAC...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCAGGCTGCAGTGCAGTaGCTATTCACAGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTQAAVQ*LFTGVI
Trigger: GATCACACCTGTGAATAGCCACTGCACTGCAGCCTG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTCTTTTTATCCAGGCTaGTGTGCAGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSSFYPG*CAVAQS
Trigger: AGATTGTGCCACTGCACACCAGCCTGGATAAAAAGA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGGCAGGAGAATCACTTaGACCCGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPGRRIT*TREVEA
Trigger: AGCCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGCAGGTGGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKSRWIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTGTCCTGTGGAGACATaGCAATGTAAACCCATAAAC +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSCPVET*QCKPIN
Trigger: GTTTATGGGTTTACATTGTCATGTCTCCACAGGACA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCATGTCCTTCAGCAGGTaGATGGATAAACTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSMSFSR*MDKLLY
Trigger: GTACAACAGTTTATCCATTCACCTGCTGAAGGACAT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGTTGCTCATTTTAGCTaGGAGAGGGTGATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSVAHFS*ERVIFG
Trigger: ACCAAAAATCACCCTCTCTCAGCTAAAATGAGCAAC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCATTGCATTCCAGCTTaGGCAGAGCAAACCTCCATC +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTHCIPA*AEQTSI
Trigger: GATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTTGGAGTTAGGTCCATaGAAACGTAGTGAACTCCTA +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSLELGP*KRSELL
Trigger: TAGGAGTTCACTACGTTTCCATGGACCTAACTCCAA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAAATAGTAGGAGGCTaGTGGCTGAGCTCAATTGGG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKIVGG*WLSSIG
Trigger: CCCAATTGAGCTCAGCCATCAGCCTCCTACTATTTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAATCAGCACAGGAGTTTTaGCCTGCTCCACTTCTGACG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKSAQEF*PAPLLT
Trigger: CGTCAGAAGTGGAGCAGGTCAAAACTCCTGTGCTGA...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAAATCAGCCAGGCATaGTGGTGCACGCTCATAATC +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKISQA*WCTLII
Trigger: GATTATGAGCGTGCACCAGCATGCCTGGCTGATTTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGGATCTCACTATGTTaGCCAGGCTGCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKRISLC*PGCSAV
Trigger: CACTGCACTGCAGCCTGGGCAACATAGTGAGATCCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAATGGAGCCTGATAGTTTaGCTCCTGGCTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKWSLIV*LLALPL
Trigger: AAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCA...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTGGATGTGGGCATCTTaGGTAAATCCTTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSWMWAS*VNPYLA
Trigger: TGCTAAATAAGGATTTACCCAAGATGCCCACATCCA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGACAGGTTCTTATCCCTaGGGGACGGGGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRTGSYP*GTGEEQ
Trigger: CTGTTCCTCCCCCGTCCCCCAGGGATAAGAACCTGT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPRRRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCCCACTGCAACCTCCGCCT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCGTGATGAGGGAGGCATaGGGGAGGGGAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVVMREA*GRGALR
Trigger: CCTCAGTGCTCCCCTCCCCCATGCCTCCCTCATCAC...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCCATGTTGGCCAGGCTaGTCTCGAACCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPPCWPG*SRTSDL
Trigger: GAGGTCAGAGGTTCGAGACCAGCCTGGCCAACATGG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGTAATCCCAGCCCTTTaGGAGGCCGACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLVIPAL*EADAGE
Trigger: TTCGCCCGCGTCGGCCTCCCAAAGGGCTGGGATTAC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAGCACATTCTTGGGTaGAAGAAAACCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKHILG*KKTTPL
Trigger: CAAAGGGGTGGTTTTCTTTCACCCAAGAATGTGCTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAGGTGTGTGGACACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRRCVDT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGTCCACACACCT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGACCAGTGTTTGTGGGCTaGTATTCAACTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRPVFVG*YSTHLL
Trigger: CAGAAGATGAGTTGAATATCAGCCCACAAACACTGG...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCCATTTACAAGCAACATaGCAAGAATTCAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSHLQAT*QEFKQS
Trigger: TGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATG...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCCTGGATGCAGCAATTaGAAAGTCCAATGGGATCAA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTPGCSN*KVQWDQ
Trigger: TTGATCCCATTGGACTTTTCAATTGCTGCATCCAGG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTACTCCAACTGGGTTCTaGCAAACATACCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTTPTGF*QTYHVH
Trigger: ATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAATGGAGTGCAGTGGTGTaGTCTTGGCCCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEWSAVV*SWPTAT
Trigger: GGTTGCAGTGGGCCAAGATCACACCACTGCACTCCA...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACCGGGAGGTGGAGGCTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKPGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAGCCTCCACCTCCCGG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGGTCTACAGGCATGTaGCACTGTGCCTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKRSTGM*HCAWQK
Trigger: TTTTTGCCAGGCACAGTGGCACATGCCTGTAGACCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGACCAATGTGCCACTCTaGTGGGGGATGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKTNVPL*WGMVMR
Trigger: CCTCATCACCATCCCCCAGCAGAGTGGCACATTGGT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGGAACCCTTATTCACTaGTGGTGGGAATGCAAAATG +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTGTLIH*WWECKM
Trigger: CATTTTGCATTCCCACCAGCAGTGAATAAGGGTTCC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCTGAGGCAGGAGACTTaGTTGAACCTGGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPLRQET*LNLGDG
Trigger: TCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCCTCAG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAGGAAAGCACATTCTTaGGTGAAAGAAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTRKAHS*VKENHP
Trigger: GGGGTGGTTTTCTTTCACCCAAGAATGTGCTTTCCT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGGAGGCCAAGGTGTGTaGACACTTGAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRGGQGV*TLEVRS
Trigger: ACTCCTGACCTCAAGTGTCCACACACCTTGGCCTCC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCCAAGATAAGCTGAGCTaGATCCAGACTATAAGAATT +
Preference number: 4 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSQDKLS*IQTIRI
Trigger: AATTCTTATAGTCTGGATCCAGCTCAGCTTATCTTG...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAATGTGCCACTCTGCTaGGGGATGGTGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKNVPLC*GMVMRE
Trigger: CTCCCTCATCACCATCCCCCAGCAGAGTGGCACATT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACGTGGGTGGATCGCTTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYVGGSL*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAAGCGATCCACCCAC...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGAGCAGGTGGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSSRWIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGATAGCCTTATGAAGTaGTATTGTGCCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRDSLMK*YCASSE
Trigger: CTCAGAACTGGCACAATATCACTTCATAAGGCTATC...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTATTTCACCAAAGATATaGGTGCCCAACAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTISPKI*VPNKYL
Trigger: CAGGTACTTGTTGGGCACTCATATCTTTGGTGAAAT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTCAGCACAGGAGTTTTaGCCTGCTCCACTTCTGACG +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPSAQEF*PAPLLT
Trigger: CGTCAGAAGTGGAGCAGGTCAAAACTCCTGTGCTGA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACACTGGCCACTGTACTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLHWPLY*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAGTACAGTGGCCAGTG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGACAAACATACCATGTaGATTGTCCTGTGGAGACAT +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTDKHTM*IVLWRH
Trigger: ATGTCTCCACAGGACAATGCACATGGTATGTTTGTC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAACCAATGTGCCACTCTaGTGGGGGATGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCETNVPL*WGMVMR
Trigger: CCTCATCACCATCCCCCAGCAGAGTGGCACATTGGT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAACCTTCACATCGATTaGATTCCCTGCCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTNLHID*IPCLKL
Trigger: AAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAACTGAGGCAGGAGACTTaGTTGAACCTGGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCELRQET*LNLGDG
Trigger: TCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCCTCAG...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAGGCGGAGGTTGCAGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIRRRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCCCACTGCAACCTCCGCCT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCCAGGCCTAGCTTGCTaGATGATGAGAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPPGLAC*MMRDTV
Trigger: GACTGTGTCTCTCATCATCCAGCAAGCTAGGCCTGG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGCCAGGCCTAGCTTGCTaGATGATGAGAGACACAGTC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRPGLAC*MMRDTV
Trigger: GACTGTGTCTCTCATCATCCAGCAAGCTAGGCCTGG...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGCAGATCACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRADHLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCCCACCTCAGGTGATCTGC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATACTCCTTAGGCAACTCTaGGTCCCAGTGACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHILLRQL*VPVTQE
Trigger: CTCCTGGGTCACTGGGACCCAGAGTTGCCTAAGGAG...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAAATGTGCCACTCTGCTaGGGGATGGTGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCENVPLC*GMVMRE
Trigger: CTCCCTCATCACCATCCCCCAGCAGAGTGGCACATT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCTTATTCACTGCTGGTaGGAATGCAAAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLIHCW*ECKMVQ
Trigger: CTGTACCATTTTGCATTCCCACCAGCAGTGAATAAG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTTGGAGTTAGGTCCATaGAAACGTAGTGAACTCCTA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLELGP*KRSELL
Trigger: TAGGAGTTCACTACGTTTCCATGGACCTAACTCCAA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGTAATCCCAGCCCTTTaGGAGGCCGACGCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKVIPAL*EADAGE
Trigger: TTCGCCCGCGTCGGCCTCCCAAAGGGCTGGGATTAC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGGGTTTGCTCCAGATTaGATACTATCAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTGFAPD*ILSERR
Trigger: CCTTCTTTCTGATAGTATCCAATCTGGAGCAAACCC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGAATTTAATAAGAATTaGTGGAAGGGGCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVREFNKN*WKGPSR
Trigger: TCTGCTAGGCCCCTTCCATCAATTCTTATTAAATTC...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGGTTGCAGTGCAATGTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEGCSAM*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACATTGCACTGCAACC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGTGGGTGGATCGCTTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKVGGSL*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAAGCGATCCACCCAC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGGATGCCGGACATGGTaGTTCAACGATTGCACTTAC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRGCRTW*FNDCTY
Trigger: GTAAGTGCAATCGTTGAATCACCATGTCCGGCATCC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAATGCAAAATTACCTaGGTATGGTGGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKCKIT*VWWCTL
Trigger: AAGTGTGCACCACCATACTCAGGTAATTTTGCATTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAACCAGTGTTTGTGGGCTaGTATTCAACTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKPVFVG*YSTHLL
Trigger: CAGAAGATGAGTTGAATATCAGCCCACAAACACTGG...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTATTACATATTGTTCCTaGGTATTCCTTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTITYCS*VFLPSA
Trigger: TGCACTGGGAAGGAATACTCAGGAACAATATGTAAT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGCACATCCAGTGGAATaGTGGAGTCAGTGCACAACA +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRAHPVE*WSQCTT
Trigger: TGTTGTGCACTGACTCCATCATTCCACTGGATGTGC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAACTCTGGGTCCCAGTaGCCCAGGAGGTCACTACAT +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLNSGSQ*PRRSLH
Trigger: ATGTAGTGACCTCCTGGGTCACTGGGACCCAGAGTT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGGCAGGAGACTTGCTTaGACCTGGGAGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKGRRLA*TWETEV
Trigger: AACCTCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGGCAGCCAGATCACCTaGGGTCGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKGSQIT*GREFKT
Trigger: GGTCTTGAACTCCCGACCTCAGGTGATCTGGCTGCC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGAGCTGCAGCTGTTTaGATGTGTTCTAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKRAAAV*MCSKAS
Trigger: GCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGCTGTGAAGCATTTCTaGAGAAGGATATGCTATGTA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTAVKHF*RRICYV
Trigger: TACATAGCATATCCTTCTGCAGAAATGCTTCACAGC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAGGTGTGAGTCATCATaGCCAGCCCCAATCTCATAC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRRCESS*PAPISY
Trigger: GTATGAGATTGGGGCTGGGCATGATGACTCACACCT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCACCCAGACTGGAGTaGAGTGGTGTGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYSPRLE*SGVILA
Trigger: GGCCAAGATCACACCACTGCACTCCAGTCTGGGTGA...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAATGGTACAACCACTTTaGAAAAAGCGTTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRMVQPL*KKRFGS
Trigger: ACTGCCAAAACGCTTTTTGCAAAGTGGTTGTACCAT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATATTGCCCAGGCTGCAGTaGAGTGGCTATTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHILPRLQ*SGYSQV
Trigger: CACCTGTGAATAGCCACTGCACTGCAGCCTGGGCAA...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTTGAAGTACTTTCTTTaGCACACAGTCTCCCAACAT +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLKYFL*HTVSQH
Trigger: ATGTTGGGAGACTGTGTGGCAAAGAAAGTACTTCAA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATACTGGGAGACGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHILGDGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGTCTCCCAG...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAACTATGTTCACTATTTaGGTGACGGGTTCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRTMFTI*VTGSVE
Trigger: TTCAACTGAACCCGTCACCCAAATAGTGAACATAGT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358678.7
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGGAAAGCACATTCTTaGGTGAAAGAAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKRKAHS*VKENHP
Trigger: GGGGTGGTTTTCTTTCACCCAAGAATGTGCTTTCCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGCATTGCATTCCAGCTTaGGCAGAGCAAACCTCCATC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRHCIPA*AEQTSI
Trigger: GATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATG...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAACAGGGGCACATCCAGTaGAATGATGGAGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEQGHIQ*NDGVSA
Trigger: TGCACTGACTCCATCATTCCACTGGATGTGCCCCTG...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGCAGATCACCTGAGGTaGGGAATTCAAGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEADHLR*GIQDQP
Trigger: AGGCTGGTCTTGAATTCCCCACCTCAGGTGATCTGC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAAATTAAGCCCTGGGTaGGAGTGCCCTCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYKLSPG*ECPLVV
Trigger: AACCACCAGAGGGCACTCTCACCCAGGGCTTAATTT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCGGTTGCAGTGCAATGTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVGCSAM*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACATTGCACTGCAACC...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAAATAGTAGGAGGCTaGTGGCTGAGCTCAATTGGG +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRKIVGG*WLSSIG
Trigger: CCCAATTGAGCTCAGCCATCAGCCTCCTACTATTTT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAGGTGGAGGTTGCAGTaGGCTGAGAATGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIRWRLQ*AENVPL
Trigger: TAGTGGCACATTCTCAGCTCACTGCAACCTCCACCT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAATGAGGGCTATCTTTaGACCCACAGTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKNEGYL*THSGLN
Trigger: GTTCAAGCCACTGTGGGTTCAAAGATAGCCCTCATT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAATCAATACCAGACATATaGGTGACACCATCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKSIPDI*VTPSRT
Trigger: AGTCCTAGATGGTGTCACTCATATGTCTGGTATTGA...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGGCCTGGGCAATAAAATaGATGAGACCCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKAWAIK*MRPSLS
Trigger: TGAGAGAGAGGGTCTCATTCATTTTATTGCCCAGGC...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAAAACAGGAGTCATTaGACTATCTGTGATGAAAGG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKNRSH*TICDER
Trigger: CCTTTCATCACAGATAGTTCAATGACTCCTGTTTTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAGGCAGCCAGATCACCTaGGGTCGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLGSQIT*GREFKT
Trigger: GGTCTTGAACTCCCGACCTCAGGTGATCTGGCTGCC...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAATATTGAGGTTGCAGTaGAATGTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKILRLQ*NVIVPL
Trigger: CAGTGGCACAATCACATTGCACTGCAACCTCAATAT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGATGTACGCCCGAATTTTaGACTGGAAATAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRCTPEF*TGNKCF
Trigger: GAAACATTTATTTCCAGTCCAAAATTCGGGCGTACA...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358678.7
CDS-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCTGGAGCCTGATAGTTTaGCTCCTGGCTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVWSLIV*LLALPL
Trigger: AAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCA...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAACAGGTTCTTATCCCTaGGGGACGGGGGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKTGSYP*GTGEEQ
Trigger: CTGTTCCTCCCCCGTCCCCCAGGGATAAGAACCTGT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTTCAAATTAAGCCCTaGGTGAGAGTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSVQIKP*VRVPSG
Trigger: ACCAGAGGGCACTCTCACCCAGGGCTTAATTTGAAC...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAAACAAAACTCCAACTaGGTTCTGACAAACATACCA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTKQNSN*VLTNIP
Trigger: TGGTATGTTTGTCAGAACCCAGTTGGAGTTTTGTTT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCACTCCTTAGGCAACTCTaGGTCCCAGTGACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSLLRQL*VPVTQE
Trigger: CTCCTGGGTCACTGGGACCCAGAGTTGCCTAAGGAG...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGGTGGGAATGCAAAATaGTACAGCCTCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRGGNAK*YSLSVG
Trigger: TCCTACAGAGAGGCTGTACCATTTTGCATTCCCACC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAAAAATAAATGTGATGTaGATGAGCTGTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRKINVM*MSCLSR
Trigger: TCTGCTCAGACAGCTCATCCACATCACATTTATTTT...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTGCTATCCATCCAATTaGATTCCTACAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTCYPSN*IPTKLQ
Trigger: TTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCCATGTTGGCCAGGCTaGTCTCGAACCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLPCWPG*SRTSDL
Trigger: GAGGTCAGAGGTTCGAGACCAGCCTGGCCAACATGG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCCAATTTCTACTCCTTaGCGGCTTCTCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTPISTP*RLLTTN
Trigger: GTTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549982.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGAGGCACATTTCTCTTTaGTTCCCCCAGGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKRHISL*FPQEPP
Trigger: CGGAGGTTCCTGGGGGAATCAAAGAGAAATGTGCCT...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGGATGCCGGACATGGTaGTTCAACGATTGCACTTAC +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLGCRTW*FNDCTY
Trigger: GTAAGTGCAATCGTTGAATCACCATGTCCGGCATCC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAAGAGACATTCTTGCTaGATTGAAGACTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKKRHSC*IEDSEE
Trigger: CTCTTCTGAGTCTTCAATTCAGCAAGAATGTCTCTT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTGCACATCCAGTGGAATaGTGGAGTCAGTGCACAACA +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTAHPVE*WSQCTT
Trigger: TGTTGTGCACTGACTCCATCATTCCACTGGATGTGC...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGTACCAGACATATGAGTaGCACCATCTAGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSYQTYE*HHLGLA
Trigger: GGCTAGTCCTAGATGGTGTCACTCATATGTCTGGTA...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGAGTTCAAGGTTACAGTaGGCTACGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSSSRLQ*ATIAPL
Trigger: CAGTGGTGCAATCGTAGCTCACTGTAACCTTGAACT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATGGCAGGAGACTTGCTTaGACCTGGGAGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYGRRLA*TWETEV
Trigger: AACCTCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCC...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTGGGGTGTCTCAGTATaGGAGTGTTTAGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRWGVSV*ECLEEP
Trigger: AGGTTCTTCTAAACACTCTCATACTGAGACACCCCA...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CTTAGGGTTAATTTCCTCATGCAAAACACCACTTCAGAAGTTTGTTATTGCAAGTTGAGCACTGGAGGTTaGGGCTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRVNFLMQNTTSEVCYCKLSTGG*GCSELR
Trigger: TCTCAGCTCACTGCAGCCTCAACCTCCAGTGCTCAA...CTTGCAATAACAAACTTCTGAAGTGGTGTTTTGCATGAGGAAATTAACCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548545.1
CDS-3UTR GCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAGTATTCCTTCCCAGTaGATTCAAAATATTCTCACA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTSIPSQ*IQNILT
Trigger: TGTGAGAATATTTTGAATGCACTGGGAAGGAATACT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAGGTGTGAGTCATCATaGCCAGCCCCAATCTCATAC +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYRCESS*PAPISY
Trigger: GTATGAGATTGGGGCTGGGCATGATGACTCACACCT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAGGTCTACAGGCATGTaGCACTGTGCCTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLRSTGM*HCAWQK
Trigger: TTTTTGCCAGGCACAGTGGCACATGCCTGTAGACCT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCACTGGGAGACGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSLGDGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGTCTCCCAG...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGTGGAGCCTGATAGTTTaGCTCCTGGCTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKWSLIV*LLALPL
Trigger: AAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCA...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACGGTGAGAGTGCCCTCTaGTGGTTTCCCAATAATGCT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYGESAL*WFPNNA
Trigger: AGCATTATTGGGAAACCACCAGAGGGCACTCTCACC...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAGTTCAAATTAAGCCCTaGGTGAGAGTGCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIVQIKP*VRVPSG
Trigger: ACCAGAGGGCACTCTCACCCAGGGCTTAATTTGAAC...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGCTGAGATCATGCCACTaGCCACTGTACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKLRSCH*PLYCTP
Trigger: TGGAGTGCAGTACAGTGGCCAGTGGCATGATCTCAG...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAACCCAGTCATGGAAACTaGCAAACATTACAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKPSHGN*QTLQVR
Trigger: TCTAACTTGTAATGTTTGCCAGTTTCCATGACTGGG...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAATCAGAAAATAAGGTaGAGTGTCTCTGAATGCATA +
Preference number: 4 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTNQKIR*SVSECI
Trigger: TATGCATTCAGAGACACTCCACCTTATTTTCTGATT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACAGACTGGAGTGCAGTaGTGTGATCTTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKQTGVQ*CDLGPL
Trigger: CAGTGGGCCAAGATCACACCACTGCACTCCAGTCTG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGACAAGAATATAGCAATTaGAACTTTCATTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRQEYSN*NFHSWW
Trigger: CCACCATGAATGAAAGTTCCAATTGCTATATTCTTG...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCCTTCAGCAGGTGAATaGATAAACTGTTGTACACCC +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKPSAGE*INCCTP
Trigger: GGGTGTACAACAGTTTATCCATTCACCTGCTGAAGG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGTGGGAATGCAAAATaGTACAGCCTCTCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSGGNAK*YSLSVG
Trigger: TCCTACAGAGAGGCTGTACCATTTTGCATTCCCACC...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTTTGTGGGGGCCGAGATaGGAGGATCACTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLLWGPR*EDHLRP
Trigger: TGGTCTCAAGTGATCCTCCCATCTCGGCCCCCACAA...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp GAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTaGGGTAAGGTTCGAGTCACTGTAAAATGTAATTAT +
Preference number: 4 (lower is better)
Translates to: EPDSLAPGSPTC*GKVRVTVKCNY
Trigger: ATAATTACATTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp GAATTTGGGATTGGGAGAGGGTCTAAGGAAACGGGTTaGCTCCAGATTGGATACTATCAGAAAGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EFGIGRGSKETG*LQIGYYQKEGE
Trigger: TTCTCCTTCTTTCTGATAGTATCCAATCTGGAGCAAACCCGTTTCCTTAGACCCTCTCCCAATCCCAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTAAATTAAGCCCTGGGTaGGAGTGCCCTCTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLKLSPG*ECPLVV
Trigger: AACCACCAGAGGGCACTCTCACCCAGGGCTTAATTT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGGTGGGAGGATTGCTTaGGCCCAGGATATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKGGRIA*AQDIEV
Trigger: AACCTCAATATCCTGGGCTCAAGCAATCCTCCCACC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAGGTGGGAGGATTGCTTaGGCCCAGGATATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSGGRIA*AQDIEV
Trigger: AACCTCAATATCCTGGGCTCAAGCAATCCTCCCACC...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAGGTGTGTGGACACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYRCVDT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGTCCACACACCT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAACTGTAATGAGTTGCTaGGAAACTACATACTCTATC +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKTVMSC*ETTYSI
Trigger: GATAGAGTATGTAGTTTCTCAGCAACTCATTACAGT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTTTGTCAATCAGGAATaGGGGCTATCTTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKFVNQE*GLSLNP
Trigger: TGGGTTCAAAGATAGCCCTCATTCCTGATTGACAAA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTTACCAGACATATGAGTaGCACCATCTAGGACTAGCC +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTYQTYE*HHLGLA
Trigger: GGCTAGTCCTAGATGGTGTCACTCATATGTCTGGTA...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTGTCCTGTGGAGACATaGCAATGTAAACCCATAAAC +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPCPVET*QCKPIN
Trigger: GTTTATGGGTTTACATTGTCATGTCTCCACAGGACA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAGTGCAAACACCTGATTaGCATAGCTCACTACAACCC +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIVQTPD*HSSLQP
Trigger: GGGTTGTAGTGAGCTATGTCAATCAGGTGTTTGCAC...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATGACCTGCTCCACTTCTaGCGCTCCTTAGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYDLLHF*RSLGNS
Trigger: AGAGTTGCCTAAGGAGCGTCAGAAGTGGAGCAGGTC...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTGACCTGCTCCACTTCTaGCGCTCCTTAGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVDLLHF*RSLGNS
Trigger: AGAGTTGCCTAAGGAGCGTCAGAAGTGGAGCAGGTC...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAGGGGGAGGGGAGCACTaGGGATATATAAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIGGGEH*GYISYF
Trigger: GAAATAACTTATATATCCTCAGTGCTCCCCTCCCCC...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAGTTCAAGGTTACAGTaGGCTACGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHISSRLQ*ATIAPL
Trigger: CAGTGGTGCAATCGTAGCTCACTGTAACCTTGAACT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAACAGGAATTTCATAGATaGCCCTACCCCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEQEFHR*PYPKSH
Trigger: ATGGGATTTGGGGTAGGGGCATCTATGAAATTCCTG...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAAGGGTTTACCTGAAGTaGCCAGAACCATCCAAAATG +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCERVYLK*PEPSKM
Trigger: CATTTTGGATGGTTCTGGGCACTTCAGGTAAACCCT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAATCCAGGCCTAGCTTaGTGGATGATGAGAGACACA +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYNPGLA*WMMRDT
Trigger: TGTGTCTCTCATCATCCAGCAAGCTAGGCCTGGATT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAATCCAGGCCTAGCTTaGTGGATGATGAGAGACACA +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLNPGLA*WMMRDT
Trigger: TGTGTCTCTCATCATCCAGCAAGCTAGGCCTGGATT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTTCACCCAGACTGGAGTaGAGTGGTGTGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVSPRLE*SGVILA
Trigger: GGCCAAGATCACACCACTGCACTCCAGTCTGGGTGA...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGAGGCATGTGCCACTGTaGCTGGCAAAAAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSRHVPL*LAKSLF
Trigger: AAAAAGACTTTTTGCCAGGCACAGTGGCACATGCCT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTTTGCCCAGGCTGCAGTaGAGTGGCTATTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVLPRLQ*SGYSQV
Trigger: CACCTGTGAATAGCCACTGCACTGCAGCCTGGGCAA...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTAGGATCTCACTATGTTaGCCAGGCTGCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLRISLC*PGCSAV
Trigger: CACTGCACTGCAGCCTGGGCAACATAGTGAGATCCT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGATCGATTGCATTCCCTaGCTGAAACTTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKIDCIP*LKLSLL
Trigger: AAGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGAT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCGGTGGAGAGTGTATCTaGAGAAGGAATCAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVGGECI*RRNQLS
Trigger: ACTCAGCTGATTCCTTCTGCAGATACACTCTCCACC...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAATTGAGGCACGAAAATTaGTTGAATCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCELRHEN*LNPGGR
Trigger: TCTGCCTCCTGGATTCAAGCAATTTTCGTGCCTCAA...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGGTGAGAGTGCCCTCTaGTGGTTTCCCAATAATGCT +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKGESAL*WFPNNA
Trigger: AGCATTATTGGGAAACCACCAGAGGGCACTCTCACC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACTGAGATCATGCCACTaGCCACTGTACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKLRSCH*PLYCTP
Trigger: TGGAGTGCAGTACAGTGGCCAGTGGCATGATCTCAG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAACAAGATAAGCTGAGCTaGATCCAGACTATAAGAATT +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKQDKLS*IQTIRI
Trigger: AATTCTTATAGTCTGGATCCAGCTCAGCTTATCTTG...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTGTGGGGGCCGAGATaGGAGGATCACTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLLWGPR*EDHLRP
Trigger: TGGTCTCAAGTGATCCTCCCATCTCGGCCCCCACAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAGATAAGGGAGAGTTCTaGAAACATGTCATATGGATA +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKDKGEF*KHVIWI
Trigger: TATCCATATGACATGTTTCCAGAACTCTCCCTTATC...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAGAGAGGGTGATTTTTaGTATTTTCTGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKREGDF*YFLDGT
Trigger: GGTGCCATCCAGAAAATACCAAAAATCACCCTCTCT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACCAATTTCTACTCCTTaGCGGCTTCTCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKPISTP*RLLTTN
Trigger: GTTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGAATTTAATAAGAATTaGTGGAAGGGGCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTREFNKN*WKGPSR
Trigger: TCTGCTAGGCCCCTTCCATCAATTCTTATTAAATTC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGTTACGACATCGTCCATaGGGATACCAACGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKLRHRP*GYQRCL
Trigger: TAAGCACCGTTGGTATCCTCATGGACGATGTCGTAA...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393128.8
CDS-3UTR TCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCCCTGGATGCAGCAATTaGAAAGTCCAATGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVPGCSN*KVQWDQ
Trigger: TTGATCCCATTGGACTTTTCAATTGCTGCATCCAGG...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAAGGTGGAGTGTCTCTaGATGCATAACTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLKVECL*MHNWNK
Trigger: CTTGTTCCAGTTATGCATTCAGAGACACTCCACCTT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACACTCCAACTGGGTTCTaGCAAACATACCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYTPTGF*QTYHVH
Trigger: ATGCACATGGTATGTTTGTCAGAACCCAGTTGGAGT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGCATTCCTGCCTTGTATaGAAGAATTCTGAAGCTATC +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRHSCLV*KNSEAI
Trigger: GATAGCTTCAGAATTCTTTCATACAAGGCAGGAATG...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGCCTGGGCAATAAAATaGATGAGACCCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKAWAIK*MRPSLS
Trigger: TGAGAGAGAGGGTCTCATTCATTTTATTGCCCAGGC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAACATTTGTCAGCTGAATaGCTCCATCAGTCACTTAAC +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEHLSAE*LHQSLN
Trigger: GTTAAGTGACTGATGGAGTCATTCAGCTGACAAATG...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATATGGGGTGTCTCAGTATaGGAGTGTTTAGAAGAACCT +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIWGVSV*ECLEEP
Trigger: AGGTTCTTCTAAACACTCTCATACTGAGACACCCCA...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAGAGCTGCAGCTGTTTaGATGTGTTCTAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYRAAAV*MCSKAS
Trigger: GCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCCACACGTGCTATCTTaGATATCACTATCATTTCAG +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKPHVLS*ISLSFQ
Trigger: CTGAAATGATAGTGATATGCAAGATAGCACGTGTGG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGAATGCATCATCCCCTaGCAAAAATCTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRECIIP*QKSSLV
Trigger: AACCAAAGAAGATTTTTGGCAGGGGATGATGCATTC...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAGGAAAGCACATTCTTaGGTGAAAGAAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIRKAHS*VKENHP
Trigger: GGGGTGGTTTTCTTTCACCCAAGAATGTGCTTTCCT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGATAAGTATGTGGATGTaGGCATCTTGGGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRISMWM*ASWVNP
Trigger: AGGATTTACCCAAGATGCCCACATCCACATACTTAT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGATGGCTGAGCTCAATTaGGAGTATCTTTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSMAELN*EYLSLV
Trigger: CACCAAAGAAAGATACTCCCAATTGAGCTCAGCCAT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAAAAATTAGCCGGACATaGTGTTGCATGCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEKISRT*CCMPIV
Trigger: GACTATAGGCATGCAACACCATGTCCGGCTAATTTT...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTGTAAGACCCAGTCATaGAAACTGGCAAACATTACA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKCKTQS*KLANIT
Trigger: TGTAATGTTTGCCAGTTTCCATGACTGGGTCTTACA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAATCAGAAAATAAGGTaGAGTGTCTCTGAATGCATA +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKNQKIR*SVSECI
Trigger: TATGCATTCAGAGACACTCCACCTTATTTTCTGATT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTATGTGCATTGTCCTGTaGAGACATGACAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPMCIVL*RHDNVN
Trigger: GTTTACATTGTCATGTCTCCACAGGACAATGCACAT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTATTTCCTTTGGATGCTaGGAAACAAAACTCCAACTG +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPISFGC*ETKLQL
Trigger: CAGTTGGAGTTTTGTTTCCCAGCATCCAAAGGAAAT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACAGGCTGCAGTGCAGTaGCTATTCACAGGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLQAAVQ*LFTGVI
Trigger: GATCACACCTGTGAATAGCCACTGCACTGCAGCCTG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAATAATTGCCAAAACTTaGAAGCAATCAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKIIAKT*KQSTKM
Trigger: CATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTAT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCTCTTTTTATCCAGGCTaGTGTGCAGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVSFYPG*CAVAQS
Trigger: AGATTGTGCCACTGCACACCAGCCTGGATAAAAAGA...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp GTAGAATTAGGGCATGATGTGACAGACTGTAATGAGTaGCTGAGAAACTACATACTCTATCCCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VELGHDVTDCNE*LRNYILYPQEN
Trigger: GTTTTCCTGGGGATAGAGTATGTAGTTTCTCAGCAACTCATTACAGTCTGTCACATCATGCCCTAATTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACCAATTTCTACTCCTTaGCGGCTTCTCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLPISTP*RLLTTN
Trigger: GTTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGAAGCACATTCTTGGGTaGAAGAAAACCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKKHILG*KKTTPL
Trigger: CAAAGGGGTGGTTTTCTTTCACCCAAGAATGTGCTT...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCATTTACAAGCAACATaGCAAGAATTCAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKHLQAT*QEFKQS
Trigger: TGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTGATAGCCTTATGAAGTaGTATTGTGCCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTDSLMK*YCASSE
Trigger: CTCAGAACTGGCACAATATCACTTCATAAGGCTATC...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATTTCACCAAAGATATaGGTGCCCAACAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLISPKI*VPNKYL
Trigger: CAGGTACTTGTTGGGCACTCATATCTTTGGTGAAAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAGGGGGAGGGGAGCACTaGGGATATATAAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSGGGEH*GYISYF
Trigger: GAAATAACTTATATATCCTCAGTGCTCCCCTCCCCC...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTTTACCCAAAGGAGTTaGAAGCTTAAATGGACACAA +
Preference number: 4 (lower is better)
Translates to: MWMWASWVNPYLAELCTRFTQRS*KLKWTQ
Trigger: TTGTGTCCATTTAAGCTTTCAACTCCTTTGGGTAAA...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTTGGTAACTGGTAATTaGAGTACTTTCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPLVTGN*STFFAT
Trigger: TGTGGCAAAGAAAGTACTTCAATTACCAGTTACCAA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCTTTGTTCTATGGGTTaGTCTTCCTGGATATTTCAA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKLCSMG*SSWIFQ
Trigger: TTGAAATATCCAGGAAGATCAACCCATAGAACAAAG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTACTGTACAGTTCAGTTaGTATGCTTTTTCTACCAAG +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPTVQFS*YAFSTK
Trigger: CTTGGTAGAAAAAGCATATCAACTGAACTGTACAGT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTCTAAATGTCACAAATaGGCTGGTTTCTTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKSKCHK*AGFFLV
Trigger: AACGAGAAAGAAACCAGCTCATTTGTGACATTTAGA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATATTGAGGTTGCAGTaGAATGTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLILRLQ*NVIVPL
Trigger: CAGTGGCACAATCACATTGCACTGCAACCTCAATAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTATTATGGTAAAGGGCTaGAAAGGAAATAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPIMVKG*KGNKPI
Trigger: TATGGGCTTATTTCCTTTGCAGCCCTTTACCATAAT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAATCGATTGCATTCCCTaGCTGAAACTTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIIDCIP*LKLSLL
Trigger: AAGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGAT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGTTGAAGTACTTTCTTTaGCACACAGTCTCCCAACAT +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSLKYFL*HTVSQH
Trigger: ATGTTGGGAGACTGTGTGGCAAAGAAAGTACTTCAA...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGAATGCATCATCCCCTaGCAAAAATCTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEECIIP*QKSSLV
Trigger: AACCAAAGAAGATTTTTGGCAGGGGATGATGCATTC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATGGCTGAGCTCAATTaGGAGTATCTTTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLMAELN*EYLSLV
Trigger: CACCAAAGAAAGATACTCCCAATTGAGCTCAGCCAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCAAAATTAGCCGGACATaGTGTTGCATGCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVKISRT*CCMPIV
Trigger: GACTATAGGCATGCAACACCATGTCCGGCTAATTTT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGTCTTTGAACCCACAGTaGCTTGAACTCTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKSLNPQ*LELYRC
Trigger: GCACCTATAGAGTTCAAGCCACTGTGGGTTCAAAGA...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTACCCTTATTCACTGCTaGTGGGAATGCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTTLIHC*WECKMV
Trigger: TACCATTTTGCATTCCCACCAGCAGTGAATAAGGGT...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAAGAGAGGGTGATTTTTaGTATTTTCTGGATGGCACC +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLREGDF*YFLDGT
Trigger: GGTGCCATCCAGAAAATACCAAAAATCACCCTCTCT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTGGGTTTGCTCCAGATTaGATACTATCAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTGFAPD*ILSERR
Trigger: CCTTCTTTCTGATAGTATCCAATCTGGAGCAAACCC...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAAATGCAAAATTACCTaGGTATGGTGGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYKCKIT*VWWCTL
Trigger: AAGTGTGCACCACCATACTCAGGTAATTTTGCATTT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAAAGGTGGAGTGTCTCTaGATGCATAACTGGAACAAG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKKVECL*MHNWNK
Trigger: CTTGTTCCAGTTATGCATTCAGAGACACTCCACCTT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAGTGCAAACACCTGATTaGCATAGCTCACTACAACCC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLVQTPD*HSSLQP
Trigger: GGGTTGTAGTGAGCTATGTCAATCAGGTGTTTGCAC...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGTTGCTCATTTTAGCTaGGAGAGGGTGATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKVAHFS*ERVIFG
Trigger: ACCAAAAATCACCCTCTCTCAGCTAAAATGAGCAAC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CTTAGGGTTAATTTCCTCATGCAAAACACCACTTCAGAAGTTTGTTATTGCAAGAAAACTTACCGTCCATaGGGATACCAACGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LRVNFLMQNTTSEVCYCKKTYRP*GYQRCL
Trigger: TAAGCACCGTTGGTATCCTCATGGACGGTAAGTTTT...CTTGCAATAACAAACTTCTGAAGTGGTGTTTTGCATGAGGAAATTAACCCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548545.1
CDS-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCTGATGTTAGGAGTATaGAGTTTAGGCCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYLMLGV*SLGQAW
Trigger: CCATGCCTGGCCTAAACTGCATACTCCTAACATCAG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCACAGGAATTTCATAGATaGCCCTACCCCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSQEFHR*PYPKSH
Trigger: ATGGGATTTGGGGTAGGGGCATCTATGAAATTCCTG...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCTGTGGAAACCACACGTaGTATCTTGCATATCACTAT +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVCGNHT*YLAYHY
Trigger: ATAGTGATATGCAAGATAGCACGTGTGGTTTCCACA...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAGTATTCCTTCCCAGTaGATTCAAAATATTCTCACA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRALYSEEKSIPSQ*IQNILT
Trigger: TGTGAGAATATTTTGAATGCACTGGGAAGGAATACT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACATGGTACAACCACTTTaGAAAAAGCGTTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYMVQPL*KKRFGS
Trigger: ACTGCCAAAACGCTTTTTGCAAAGTGGTTGTACCAT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTAGGCATGTGCCACTGTaGCTGGCAAAAAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLRHVPL*LAKSLF
Trigger: AAAAAGACTTTTTGCCAGGCACAGTGGCACATGCCT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGAGTTTATTACTCATTaGAGCAAAGAAGAACACACA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPEFITH*SKEEHT
Trigger: TGTGTGTTCTTCTTTGCTGCAATGAGTAATAAACTC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAAGGAAAGCACATTCTTaGGTGAAAGAAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSRKAHS*VKENHP
Trigger: GGGGTGGTTTTCTTTCACCCAAGAATGTGCTTTCCT...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTTGGATGTGGGCATCTTaGGTAAATCCTTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTWMWAS*VNPYLA
Trigger: TGCTAAATAAGGATTTACCCAAGATGCCCACATCCA...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAATAAGTATGTGGATGTaGGCATCTTGGGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLISMWM*ASWVNP
Trigger: AGGATTTACCCAAGATGCCCACATCCACATACTTAT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACATAAGTATGTGGATGTaGGCATCTTGGGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYISMWM*ASWVNP
Trigger: AGGATTTACCCAAGATGCCCACATCCACATACTTAT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTTCTTTGAACCCACAGTaGCTTGAACTCTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLSLNPQ*LELYRC
Trigger: GCACCTATAGAGTTCAAGCCACTGTGGGTTCAAAGA...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACCCCAGTCATGGAAACTaGCAAACATTACAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYPSHGN*QTLQVR
Trigger: TCTAACTTGTAATGTTTGCCAGTTTCCATGACTGGG...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTGTTTCTAAGGTATACTaGGTTGGAAAAAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPVSKVY*VGKRKR
Trigger: TCTTTTCCTTTTTCCAACCCAGTATACCTTAGAAAC...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACATGTGCATTGTCCTGTaGAGACATGACAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYMCIVL*RHDNVN
Trigger: GTTTACATTGTCATGTCTCCACAGGACAATGCACAT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGAAACAAAACTCCAACTaGGTTCTGACAAACATACCA +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSKQNSN*VLTNIP
Trigger: TGGTATGTTTGTCAGAACCCAGTTGGAGTTTTGTTT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACATTTCCTTTGGATGCTaGGAAACAAAACTCCAACTG +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYISFGC*ETKLQL
Trigger: CAGTTGGAGTTTTGTTTCCCAGCATCCAAAGGAAAT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTACACACCTTTTAGAATaGCCAAAATTCAGAACACTA +
Preference number: 4 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPTHLLE*PKFRTL
Trigger: TAGTGTTCTGAATTTTGGCCATTCTAAAAGGTGTGT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTAGGAATCAAGAAGGGTaGAGAGTGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLRNQEG*RVYLQK
Trigger: CTTCTGCAGATACACTCTCCACCCTTCTTGATTCCT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAATATTCAGATGCCTGTaGAGCAATGAATGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKIFRCL*SNECAR
Trigger: CCTAGCACATTCATTGCTTCACAGGCATCTGAATAT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTATATTCAGATGCCTGTaGAGCAATGAATGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLIFRCL*SNECAR
Trigger: CCTAGCACATTCATTGCTTCACAGGCATCTGAATAT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAACTGTAATGAGTTGCTaGGAAACTACATACTCTATC +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHITVMSC*ETTYSI
Trigger: GATAGAGTATGTAGTTTCTCAGCAACTCATTACAGT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATCAATACCAGACATATaGGTGACACCATCTAGGACT +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKSIPDI*VTPSRT
Trigger: AGTCCTAGATGGTGTCACTCATATGTCTGGTATTGA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCATTTGTCAGCTGAATaGCTCCATCAGTCACTTAAC +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLHLSAE*LHQSLN
Trigger: GTTAAGTGACTGATGGAGTCATTCAGCTGACAAATG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGTTAGCTGAGAGAGGGTaGTTTTTGGTATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKLAERG*FLVFSG
Trigger: TCCAGAAAATACCAAAAATCACCCTCTCTCAGCTAA...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAGAGCTGCAGCTGTTTaGATGTGTTCTAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYRAAAV*MCSKAS
Trigger: GCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAGGGTTTACCTGAAGTaGCCAGAACCATCCAAAATG +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYRVYLK*PEPSKM
Trigger: CATTTTGGATGGTTCTGGGCACTTCAGGTAAACCCT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTTCTGCAGAAGGATATaGTATGTAAGTATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYFCRRI*YVSMRL
Trigger: CAACCTCATACTTACATAGCATATCCTTCTGCAGAA...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAAACCTTCACATCGATTaGATTCCCTGCCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKNLHID*IPCLKL
Trigger: AAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGTATGGTAATTACACCTaGATGCAGCAATTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSYGNYT*MQQLKS
Trigger: ACTTTTCAATTGCTGCATCCAGGTGTAATTACCATA...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGTGTAAGACCCAGTCATaGAAACTGGCAAACATTACA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKCKTQS*KLANIT
Trigger: TGTAATGTTTGCCAGTTTCCATGACTGGGTCTTACA...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTTTCTAAGGTATACTaGGTTGGAAAAAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YVDVGILGKSLFSRALYSVSKVY*VGKRKR
Trigger: TCTTTTCCTTTTTCCAACCCAGTATACCTTAGAAAC...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACCTTCAGCAGGTGAATaGATAAACTGTTGTACACCC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLPSAGE*INCCTP
Trigger: GGGTGTACAACAGTTTATCCATTCACCTGCTGAAGG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACTTATTCACTGCTGGTaGGAATGCAAAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKLIHCW*ECKMVQ
Trigger: CTGTACCATTTTGCATTCCCACCAGCAGTGAATAAG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAGGAATCAAGAAGGGTaGAGAGTGTATCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYRNQEG*RVYLQK
Trigger: CTTCTGCAGATACACTCTCCACCCTTCTTGATTCCT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGCCAAAAATCTTCTTTaGTTACATTACCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEAKNLL*LHYQLL
Trigger: TAACAGCTGGTAATGTAACCAAAGAAGATTTTTGGC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGAATTTAATAAGAATTaGTGGAAGGGGCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKEFNKN*WKGPSR
Trigger: TCTGCTAGGCCCCTTCCATCAATTCTTATTAAATTC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTATTACATATTGTTCCTaGGTATTCCTTCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLITYCS*VFLPSA
Trigger: TGCACTGGGAAGGAATACTCAGGAACAATATGTAAT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTTGTCAATCAGGAATaGGGGCTATCTTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLFVNQE*GLSLNP
Trigger: TGGGTTCAAAGATAGCCCTCATTCCTGATTGACAAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATATGTCCTTCAGCAGGTaGATGGATAAACTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYMSFSR*MDKLLY
Trigger: GTACAACAGTTTATCCATTCACCTGCTGAAGGACAT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGACTGTACAGTTCAGTTaGTATGCTTTTTCTACCAAG +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKTVQFS*YAFSTK
Trigger: CTTGGTAGAAAAAGCATATCAACTGAACTGTACAGT...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGTTTGGAGACTATTTTaGTATCCTGATTCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKVWRLF*YPDSLL
Trigger: TAAGAGGGAATCAGGATATCAAAATAGTCTCCAAAC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATTAGCTGAGAGAGGGTaGTTTTTGGTATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKLAERG*FLVFSG
Trigger: TCCAGAAAATACCAAAAATCACCCTCTCTCAGCTAA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACAAACTCTGATTAAGTaGTATGGAGAGATATACAGT +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLQTLIK*YGEIYS
Trigger: ACTGTATATCTCTCCATAGCACTTAATCAGAGTTTG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATGTGGAAACCACACGTaGTATCTTGCATATCACTAT +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKCGNHT*YLAYHY
Trigger: ATAGTGATATGCAAGATAGCACGTGTGGTTTCCACA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAGCTGTGAAGCATTTCTaGAGAAGGATATGCTATGTA +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSAVKHF*RRICYV
Trigger: TACATAGCATATCCTTCTGCAGAAATGCTTCACAGC...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCTCAATCCAACAATTGTaGTCTTTGGTATTTACCCAA +
Preference number: 4 (lower is better)
Translates to: SVILGKSISVFGSVSKSVSIQQL*SLVFTQ
Trigger: TTGGGTAAATACCAAAGAGCACAATTGTTGGATTGA...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp CTTAGGGTTAATTTCCTCATGCAAAACACCACTTCAGAAGTTTGTTATTGCAAGGGGTTAATTTCCTCATaGAAAACACCACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRVNFLMQNTTSEVCYCKGLISS*KTPLQK
Trigger: CTTCTGAAGTGGTGTTTTGCATGAGGAAATTAACCC...CTTGCAATAACAAACTTCTGAAGTGGTGTTTTGCATGAGGAAATTAACCCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548545.1
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATGGATGTGGGCATCTTaGGTAAATCCTTATTTAGCA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKWMWAS*VNPYLA
Trigger: TGCTAAATAAGGATTTACCCAAGATGCCCACATCCA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTATATGGTAATTACACCTaGATGCAGCAATTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLYGNYT*MQQLKS
Trigger: ACTTTTCAATTGCTGCATCCAGGTGTAATTACCATA...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATATCATTAGTACATCACTaGACACATCTATTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHISLVHH*THLLLK
Trigger: CTTTAGCAATAGATGTGTCCAGTGATGTACTAATGA...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCAAGAATATAGCAATTaGAACTTTCATTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SMWMWASWVNPYLAELCTQEYSN*NFHSWW
Trigger: CCACCATGAATGAAAGTTCCAATTGCTATATTCTTG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACATAATTGCCAAAACTTaGAAGCAATCAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: KYVDVGILGKSLFSRALYIIAKT*KQSTKM
Trigger: CATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTAT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTACCCTTATTCACTGCTaGTGGGAATGCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVTLIHC*WECKMV
Trigger: TACCATTTTGCATTCCCACCAGCAGTGAATAAGGGT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTaGTACTCGGAAGAGAAGAAAATCTTCATAATCATA +
Preference number: 4 (lower is better)
Translates to: VGILGKSLFSRA*YSEEKKIFIII
Trigger: TATGATTATGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAGAATTTAATAAGAATTaGTGGAAGGGGCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLEFNKN*WKGPSR
Trigger: TCTGCTAGGCCCCTTCCATCAATTCTTATTAAATTC...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACCTAATTACAAACTCTaGTTAAGTGCTATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKPNYKL*LSAMER
Trigger: TCTCTCCATAGCACTTAATCAGAGTTTGTAATTAGG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAAGAGACATTCTTGCTaGATTGAAGACTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYKRHSC*IEDSEE
Trigger: CTCTTCTGAGTCTTCAATTCAGCAAGAATGTCTCTT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTTTAGTAGTAAATATATaGTTTCAGGGGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLLVVNI*FQGHIQ
Trigger: CTGGATGTGCCCCTGAAATCATATATTTACTACTAA...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAAACTATATGGCGTTCTaGAAAAGGAAAAACTTACGG +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSNYMAF*KRKNLR
Trigger: CCGTAAGTTTTTCCTTTTTCAGAACGCCATATAGTT...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCATTTACCCAAAGGAGTTaGAAGCTTAAATGGACACAA +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSFTQRS*KLKWTQ
Trigger: TTGTGTCCATTTAAGCTTTCAACTCCTTTGGGTAAA...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTCTTTGTTCTATGGGTTaGTCTTCCTGGATATTTCAA +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLLCSMG*SSWIFQ
Trigger: TTGAAATATCCAGGAAGATCAACCCATAGAACAAAG...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCATTCCTGCCTTGTATaGAAGAATTCTGAAGCTATC +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVHSCLV*KNSEAI
Trigger: GATAGCTTCAGAATTCTTTCATACAAGGCAGGAATG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAAAAAACAGGAGTCATTaGACTATCTGTGATGAAAGG +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSKNRSH*TICDER
Trigger: CCTTTCATCACAGATAGTTCAATGACTCCTGTTTTT...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCATTCTGCAGAAGGATATaGTATGTAAGTATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSFCRRI*YVSMRL
Trigger: CAACCTCATACTTACATAGCATATCCTTCTGCAGAA...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGAGTTTATTACTCATTaGAGCAAAGAAGAACACACA +
Preference number: 4 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKEFITH*SKEEHT
Trigger: TGTGTGTTCTTCTTTGCTGCAATGAGTAATAAACTC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTATGGCTTTGGCACTATaGAAAAGTCCTAAATTGGAG +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVMALAL*KSPKLE
Trigger: CTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCAT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACCTAATTACAAACTCTaGTTAAGTGCTATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLPNYKL*LSAMER
Trigger: TCTCTCCATAGCACTTAATCAGAGTTTGTAATTAGG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTAGTAGTAAATATATaGTTTCAGGGGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLLVVNI*FQGHIQ
Trigger: CTGGATGTGCCCCTGAAATCATATATTTACTACTAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAAACTATATGGCGTTCTaGAAAAGGAAAAACTTACGG +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLNYMAF*KRKNLR
Trigger: CCGTAAGTTTTTCCTTTTTCAGAACGCCATATAGTT...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTGGTAACTGGTAATTaGAGTACTTTCTTTGCCACA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLLVTGN*STFFAT
Trigger: TGTGGCAAAGAAAGTACTTCAATTACCAGTTACCAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTTCTAAATGTCACAAATaGGCTGGTTTCTTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVSKCHK*AGFFLV
Trigger: AACGAGAAAGAAACCAGCTCATTTGTGACATTTAGA...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR TCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAGTTTGGAGACTATTTTaGTATCCTGATTCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLVWRLF*YPDSLL
Trigger: TAAGAGGGAATCAGGATATCAAAATAGTCTCCAAAC...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATATTATGGTAAAGGGCTaGAAAGGAAATAAGCCCATA +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYIMVKG*KGNKPI
Trigger: TATGGGCTTATTTCCTTTGCAGCCCTTTACCATAAT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACGATTCTATCTTCTATaGTCTTATGGTAATTACACC +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKRFYLL*SYGNYT
Trigger: GGTGTAATTACCATAAGAGCATAGAAGATAGAATCG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATCAATCCAACAATTGTaGTCTTTGGTATTTACCCAA +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKSIQQL*SLVFTQ
Trigger: TTGGGTAAATACCAAAGAGCACAATTGTTGGATTGA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCATACTTCTTACAGATGTaGAATATCAAGACAATCACC +
Preference number: 4 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSYFLQM*NIKTIT
Trigger: GGTGATTGTCTTGATATTGCACATCTGTAAGAAGTA...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATCATTAGTACATCACTaGACACATCTATTGCTAAAG +
Preference number: 4 (lower is better)
Translates to: WHYGKVLNWRPHINETLKSLVHH*THLLLK
Trigger: CTTTAGCAATAGATGTGTCCAGTGATGTACTAATGA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTTGCTATCCATCCAATTaGATTCCTACAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVCYPSN*IPTKLQ
Trigger: TTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCA...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATGATAAGGGAGAGTTCTaGAAACATGTCATATGGATA +
Preference number: 4 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYDKGEF*KHVIWI
Trigger: TATCCATATGACATGTTTCCAGAACTCTCCCTTATC...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTGCCAAAAATCTTCTTTaGTTACATTACCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: HVITICSNSGLSSFYLLLAKNLL*LHYQLL
Trigger: TAACAGCTGGTAATGTAACCAAAGAAGATTTTTGGC...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp GATATCTATAGCAATTTTATTCATAATTGCCAAAACTaGGAAGCAATCAACCAAGATGTCCTTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DIYSNFIHNCQN*EAINQDVLQQV
Trigger: CACCTGCTGAAGGACATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTATGAATAAAATTGCTATAGATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
3UTR CAA 72 bp TGCCTCTTAGAATATGTGGAAACCACACGTGCTATCTaGCATATCACTATCATTTCAGTTCTAATGTTATTA +
Preference number: 4 (lower is better)
Translates to: CLLEYVETTRAI*HITIISVLMLL
Trigger: TAATAACATTAGAACTGAAATGATAGTGATATGCAAGATAGCACGTGTGGTTTCCACATATTCTAAGAGGCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCAAACTCTGATTAAGTaGTATGGAGAGATATACAGT +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVQTLIK*YGEIYS
Trigger: ACTGTATATCTCTCCATAGCACTTAATCAGAGTTTG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCGATTCTATCTTCTATaGTCTTATGGTAATTACACC +
Preference number: 4 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVRFYLL*SYGNYT
Trigger: GGTGTAATTACCATAAGAGCATAGAAGATAGAATCG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR GCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATACTTCTTACAGATGTaGAATATCAAGACAATCACC +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLYFLQM*NIKTIT
Trigger: GGTGATTGTCTTGATATTGCACATCTGTAAGAAGTA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CCA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAACACACCTTTTAGAATaGCCAAAATTCAGAACACTA +
Preference number: 4 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLTHLLE*PKFRTL
Trigger: TAGTGTTCTGAATTTTGGCCATTCTAAAAGGTGTGT...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCATCCCACCCAGCACTTaGGGAGGCCAAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSIPPST*GGQGVW
Trigger: CCACACACCTTGGCCTCCCAAAGTGCTGGGTGGGAT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCTGCAGTGGTGTGATCTaGGCCCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSCSGVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGGGCCAAGATCACACCACTGCA...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAGGCACAAGAATCGCTaGAGCTTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSRHKNR*SLGGGG
Trigger: ACCTCCACCTCCCAAGCTCAAGCGATTCTTGTGCCT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTGCAGTGGTGTGATCTaGGCCCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTCSGVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGGGCCAAGATCACACCACTGCA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTTGGAGCCTGATAGTTaGGCTCCTGGCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLEPDS*APGSPT
Trigger: AGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCCTTGAGACCAGGAGTTaGATACCAACCTGGGTAACA +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSLETRS*IPTWVT
Trigger: TGTTACCCAGGTTGGTATCAAACTCCTGGTCTCAAG...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAGCTGAGGCAGGAGAATaGCTTGAGCCTATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKAEAGE*LEPMRR
Trigger: CCGCCTCATAGGCTCAAGCAATTCTCCTGCCTCAGC...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCAAACCTTCACATCGATaGCATTCCCTGCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSKPSHR*HSLPET
Trigger: AGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTT...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAAAGGCAGGAGACTTGCTaGAACCTGGGAGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKRQETC*NLGDGG
Trigger: ACCTCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCCT...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCTTGAGCCCAGGATATaGAGGTTGCAGTGCAATGTG +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLEPRI*RLQCNV
Trigger: CACATTGCACTGCAACCTCAATATCCTGGGCTCAAG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TTGGAGCCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGATATCTCTGGCATTTCTaGGTCCCCTCTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LEPDSLAPGSPTCLGKVRYLWHF*VPSSPS
Trigger: GGAAGGAGAAGAGGGGACCAAGAAATGCCAGAGATA...TCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTTGAGGCACGAAAATaGCTTGAATCCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTVEARK*LESRRQ
Trigger: CTGCCTCCTGGATTCAAGCAATTTTCGTGCCTCAAC...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGGCTGAGGCAGGAGAATaGCTTGAGCCTATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKAEAGE*LEPMRR
Trigger: CCGCCTCATAGGCTCAAGCAATTCTCCTGCCTCAGC...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCACTTCACTGGCCACTaGAAACTTCTAGAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTHFTGH*KLLEFL
Trigger: AAGGAACTCTAGAAGTTTCAAGTGGCCAGTGAAGTG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCATCCCACCCAGCACTTaGGGAGGCCAAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: SVILGKSISVFGSVSKSVIPPST*GGQGVW
Trigger: CCACACACCTTGGCCTCCCAAAGTGCTGGGTGGGAT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTCCACAATCTGTGATCTaGGGCAAGTCAATTAGTGTC +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTPQSVI*GKSISV
Trigger: GACACTAATTGACTTGCCCAAGATCACAGATTGTGG...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCAGGTGCTTGTTCTGTaGCCCAGCCTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPQVLVL*PSLECS
Trigger: ACTGCACTCTAGGCTGGGCAACAGAACAAGCACCTG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGCAGGTGCTTGTTCTGTaGCCCAGCCTAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKQVLVL*PSLECS
Trigger: ACTGCACTCTAGGCTGGGCAACAGAACAAGCACCTG...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCCAAATCGATTACGTTTaGGTGACAACTATTGTGAAG +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSQIDYV*VTTIVK
Trigger: CTTCACAATAGTTGTCACCAAAACGTAATCGATTTG...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAAACCTTCACATCGATaGCATTCCCTGCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTKPSHR*HSLPET
Trigger: AGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGAGGCAGGAGACTTGCTaGAACCTGGGAGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: YVDVGILGKSLFSRALYSRQETC*NLGDGG
Trigger: ACCTCCGTCTCCCAGGTTCAAGCAAGTCTCCTGCCT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GGACTAGCCAGCCTCAACAACCCAACTAGTGACCTCAGCTGCATGGGCAAGTCCGGTTTCAGAGTCATCTaGTTTAATGTTGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: GLASLNNPTSDLSCMGKSGFRVI*FNVGIL
Trigger: CAGAATACCAACATTAAACAAGATGACTCTGAAACC...GGACTTGCCCATGCAGCTGAGGTCACTAGTTGGGTTGTTGAGGCTGGCTAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTGTAAAACCCAGGATATTGAGGTaGCAGTGCAATGTGATTGTG +
Preference number: 5 (lower is better)
Translates to: SLAPGSPTCLGKVRVTVKPRILR*QCNVIV
Trigger: CACAATCACATTGCACTGCAACCTCAATATCCTGGG...TTTTACAGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATACCTATGAGGCGGAGGTaGCAGTGGGCTGAGATCATG +
Preference number: 5 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIPMRRR*QWAEIM
Trigger: CATGATCTCAGCCCACTGCAACCTCCGCCTCATAGG...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTACCACACGTGCTATCTaGCATATCACTATCATTTCA +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTTTRAI*HITIIS
Trigger: TGAAATGATAGTGATATGCAAGATAGCACGTGTGGT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGATCAGCACAGGAGTTTaGACCTGCTCCACTTCTGAC +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKISTGV*TCSTSD
Trigger: GTCAGAAGTGGAGCAGGTCAAAACTCCTGTGCTGAT...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGAGGATCTCACTATGTaGCCCAGGCTGCAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLEDLTM*PRLQCS
Trigger: ACTGCACTGCAGCCTGGGCAACATAGTGAGATCCTC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTGCAATGAACCGAGATaGACAGAGGAGACGCCATCT +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKCNEPR*TEETPS
Trigger: AGATGGCGTCTCCTCTGTCAATCTCGGTTCATTGCA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAGGCACAAGAATCGCTaGAGCTTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHIRHKNR*SLGGGG
Trigger: ACCTCCACCTCCCAAGCTCAAGCGATTCTTGTGCCT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAGGAATCAGCTGAGTTaGGAGACTATTTTGATATCC +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTRNQLS*ETILIS
Trigger: GGATATCAAAATAGTCTCCAAACTCAGCTGATTCCT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTTATCTCTGGCATTTCTaGGTCCCCTCTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPYLWHF*VPSSPS
Trigger: GGAAGGAGAAGAGGGGACCAAGAAATGCCAGAGATA...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTAGGCACGAAAATTGCTaGAATCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPRHENC*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAGCAATTTTCGTGCCT...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTTATTTAGCAGAGCTTaGTACTCGGAAGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTLFSRA*YSEEKK
Trigger: TTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACCCATTGCATTCCAGCTaGGGCAGAGCAAACCTCCAT +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYPLHSS*GRANLH
Trigger: ATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATGG...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTAAGGTGTGTGGACACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTKVCGH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGTCCACACACCTT...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTAAAGCACATTACATATaGTTCCTGAGTATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTKAHYI*FLSIPS
Trigger: GGAAGGAATACTCAGGAACAATATGTAATGTGCTTT...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCACCTATGAGGCGGAGGTaGCAGTGGGCTGAGATCATG +
Preference number: 5 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSPMRRR*QWAEIM
Trigger: CATGATCTCAGCCCACTGCAACCTCCGCCTCATAGG...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CCTGATAGTTTGGCTCCTGGCTCTCCCACTTGTTTGGGTAAGGTTCGAGTCACTTCTTTGTTCTATGGGTaGATCTTCCTGGATATTTCA +
Preference number: 5 (lower is better)
Translates to: PDSLAPGSPTCLGKVRVTSLFYG*IFLDIS
Trigger: TGAAATATCCAGGAAGATCAACCCATAGAACAAAGA...AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCCAGGAGCCAAACTATCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAATGCAATGAACCGAGATaGACAGAGGAGACGCCATCT +
Preference number: 5 (lower is better)
Translates to: QELIYKQHDKNSSSHGCECNEPR*TEETPS
Trigger: AGATGGCGTCTCCTCTGTCAATCTCGGTTCATTGCA...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGGGCTCTCCCACTTGTTaGGGTAAGGTTCGAGTCACT +
Preference number: 5 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKGSPTC*GKVRVT
Trigger: AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCC...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAATTGGAGCCTGATAGTTaGGCTCCTGGCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKLEPDS*APGSPT
Trigger: AGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCTTGAGCCCAGGATATaGAGGTTGCAGTGCAATGTG +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTLEPRI*RLQCNV
Trigger: CACATTGCACTGCAACCTCAATATCCTGGGCTCAAG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGAGGATCTCACTATGTaGCCCAGGCTGCAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKEDLTM*PRLQCS
Trigger: ACTGCACTGCAGCCTGGGCAACATAGTGAGATCCTC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTAGGCACGAAAATTGCTaGAATCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTRHENC*NPGGRG
Trigger: ACCTCTGCCTCCTGGATTCAAGCAATTTTCGTGCCT...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAGTTGAGGCACGAAAATaGCTTGAATCCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLVEARK*LESRRQ
Trigger: CTGCCTCCTGGATTCAAGCAATTTTCGTGCCTCAAC...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAACCAATTTCTACTCCTaGACGGCTTCTCACCACGAA +
Preference number: 5 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLTNFYS*TASHHE
Trigger: TTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGGT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549982.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTGGAGCCTGATAGTTaGGCTCCTGGCTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLLEPDS*APGSPT
Trigger: AGTGGGAGAGCCAGGAGCCAAACTATCAGGCTCCAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTGGATGTGGGCATCTaGGGTAAATCCTTATTTAGC +
Preference number: 5 (lower is better)
Translates to: YVDVGILGKSLFSRALYSVDVGI*GKSLFS
Trigger: GCTAAATAAGGATTTACCCAAGATGCCCACATCCAC...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCCCAGGATATTGAGGTaGCAGTGCAATGTGATTGTG +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTPRILR*QCNVIV
Trigger: CACAATCACATTGCACTGCAACCTCAATATCCTGGG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CAGGAGCTCATTTACAAGCAACATGACAAGAATTCAAGCAGTCATGGCTGTGAAGCTTACTACCAGTGTTaGTGGGCTGATATTCAACTC +
Preference number: 5 (lower is better)
Translates to: QELIYKQHDKNSSSHGCEAYYQC*WADIQL
Trigger: GAGTTGAATATCAGCCCACAAACACTGGTAGTAAGC...TTCACAGCCATGACTGCTTGAATTCTTGTCATGTTGCTTGTAAATGAGCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAGAATCCAGGCCTAGCTaGCTGGATGATGAGAGACAC +
Preference number: 5 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSESRPS*LDDERH
Trigger: GTGTCTCTCATCATCCAGCAAGCTAGGCCTGGATTC...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGAATCCAGGCCTAGCTaGCTGGATGATGAGAGACAC +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKESRPS*LDDERH
Trigger: GTGTCTCTCATCATCCAGCAAGCTAGGCCTGGATTC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGACCAATTTCTACTCCTaGACGGCTTCTCACCACGAA +
Preference number: 5 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKTNFYS*TASHHE
Trigger: TTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGGT...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
CDS-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATGGCTCTCCCACTTGTTaGGGTAAGGTTCGAGTCACT +
Preference number: 5 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYGSPTC*GKVRVT
Trigger: AGTGACTCGAACCTTACCCAAACAAGTGGGAGAGCC...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACGTGGATGTGGGCATCTaGGGTAAATCCTTATTTAGC +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYVDVGI*GKSLFS
Trigger: GCTAAATAAGGATTTACCCAAGATGCCCACATCCAC...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACCATTGCATTCCAGCTaGGGCAGAGCAAACCTCCAT +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLPLHSS*GRANLH
Trigger: ATGGAGGTTTGCTCTGCCCAAGCTGGAATGCAATGG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTAAGGTGTGTGGACACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVKVCGH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGTCCACACACCTT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTGGGATCAATCCAAATaGCCACACTTAACCATGTTA +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKWDQSK*PHLTML
Trigger: TAACATGGTTAAGTGTGGCAATTTGGATTGATCCCA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTAACCTGGATGCAGCAATaGAAAAGTCCAATGGGATCA +
Preference number: 5 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLTWMQQ*KSPMGS
Trigger: TGATCCCATTGGACTTTTCAATTGCTGCATCCAGGT...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCAACATACCATGTGCATaGTCCTGTGGAGACATGACA +
Preference number: 5 (lower is better)
Translates to: SVILGKSISVFGSVSKSVNIPCA*SCGDMT
Trigger: TGTCATGTCTCCACAGGACAATGCACATGGTATGTT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GAATATGTATGGCTTTGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAACATACCATGTGCATaGTCCTGTGGAGACATGACA +
Preference number: 5 (lower is better)
Translates to: EYVWLWHYGKVLNWRPHINIPCA*SCGDMT
Trigger: TGTCATGTCTCCACAGGACAATGCACATGGTATGTT...TATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCAAAGCCATACATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAATCAGCACAGGAGTTTaGACCTGCTCCACTTCTGAC +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKISTGV*TCSTSD
Trigger: GTCAGAAGTGGAGCAGGTCAAAACTCCTGTGCTGAT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGCCTGGATATTTCAAATaGTTGTGTGTTGGTAACTGG +
Preference number: 5 (lower is better)
Translates to: MWMWASWVNPYLAELCTRPGYFK*LCVGNW
Trigger: CCAGTTACCAACACACAACAATTTGAAATATCCAGG...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGGTTTGCTCCAGATaGGATACTATCAGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTRVCSR*DTIRKK
Trigger: CTTCTTTCTGATAGTATCCAATCTGGAGCAAACCCG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGCACTTCACTGGCCACTaGAAACTTCTAGAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKHFTGH*KLLEFL
Trigger: AAGGAACTCTAGAAGTTTCAAGTGGCCAGTGAAGTG...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp GTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGTTATTTAGCAGAGCTTaGTACTCGGAAGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: VGILGKSLFSRALYSEEKLFSRA*YSEEKK
Trigger: TTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAA...CTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTTATTTAGCAGAGCTTaGTACTCGGAAGAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: MWMWASWVNPYLAELCTRLFSRA*YSEEKK
Trigger: TTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAA...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549561.6
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGACAGACTGTAATGAGTaGCTGAGAAACTACATACTC +
Preference number: 5 (lower is better)
Translates to: YVDVGILGKSLFSRALYSTDCNE*LRNYIL
Trigger: GAGTATGTAGTTTCTCAGCAACTCATTACAGTCTGT...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAAGCACATTACATATaGTTCCTGAGTATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: MWMWASWVNPYLAELCTRKAHYI*FLSIPS
Trigger: GGAAGGAATACTCAGGAACAATATGTAATGTGCTTT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAGTCAATTAGTGTCTTaGGATCTGTTTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: MWMWASWVNPYLAELCTRSQLVS*DLFPNQ
Trigger: CTGATTTGGAAACAGATCCAAAGACACTAATTGACT...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCCACTGGACACATCTATaGCTAAAGGCACATTTCATC +
Preference number: 5 (lower is better)
Translates to: SVILGKSISVFGSVSKSVHWTHL*LKAHFI
Trigger: GATGAAATGTGCCTTTAGCAATAGATGTGTCCAGTG...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATTACCCCAAACCTTCACATCGATTGCATTCCCTGCCTGAAACTTTCTCTCCTCATTCAATCCAACAATaGTGCTCTTTGGTATTTACC +
Preference number: 5 (lower is better)
Translates to: NYPKPSHRLHSLPETFSPHSIQQ*CSLVFT
Trigger: GGTAAATACCAAAGAGCACAATTGTTGGATTGAATG...AGGAGAGAAAGTTTCAGGCAGGGAATGCAATCGATGTGAAGGTTTGGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTATTGAAGTACTTTCTTaGCCACACAGTCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTIEVLS*PHSLPT
Trigger: TGTTGGGAGACTGTGTGGCAAAGAAAGTACTTCAAT...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp ATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGTCTTTGTTCTATGGGTaGATCTTCCTGGATATTTCA +
Preference number: 5 (lower is better)
Translates to: MWMWASWVNPYLAELCTRSLFYG*IFLDIS
Trigger: TGAAATATCCAGGAAGATCAACCCATAGAACAAAGA...CCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACTTGAGACCAGGAGTTaGATACCAACCTGGGTAACA +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKLETRS*IPTWVT
Trigger: TGTTACCCAGGTTGGTATCAAACTCCTGGTCTCAAG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTCAGCTACTCAGGAGGTaGAGGCACGAAAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVQLLRR*RHENCL
Trigger: CAAGCAATTTTCGTGCCTCAACCTCCTGAGTAGCTG...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACAGCTACTCAGGAGGTaGAGGCACGAAAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLQLLRR*RHENCL
Trigger: CAAGCAATTTTCGTGCCTCAACCTCCTGAGTAGCTG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAACCAATTTCTACTCCTaGACGGCTTCTCACCACGAA +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLTNFYS*TASHHE
Trigger: TTCGTGGTGAGAAGCCGTCAAGGAGTAGAAATTGGT...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358678.7
ENST00000393128.8
ENST00000549982.6
CDS-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTAATTTCTACTCCTGCTaGACGGCTTCTCACCACGAA +
Preference number: 5 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVNFYSC*TASHHE
Trigger: TTCGTGGTGAGAAGCCGTCAAGCAGGAGTAGAAATT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCACAGACTGTAATGAGTaGCTGAGAAACTACATACTC +
Preference number: 5 (lower is better)
Translates to: SVILGKSISVFGSVSKSVTDCNE*LRNYIL
Trigger: GAGTATGTAGTTTCTCAGCAACTCATTACAGTCTGT...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCAGCTTACTACCAGTGTTaGTGGGCTGATATTCAACTC +
Preference number: 5 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSAYYQC*WADIQL
Trigger: GAGTTGAATATCAGCCCACAAACACTGGTAGTAAGC...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACAAGAAGAGACTAATTTaGACTAGAGGGGAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYKKRLI*TRGERR
Trigger: CCTTCTTTCCCCTCTAGTCAAAATTAGTCTCTTCTT...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACGATGGATACATGTCATaGTACCTTTGTTCAAACCCA +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYDGYMS*YLCSNP
Trigger: TGGGTTTGAACAAAGGTACAATGACATGTATCCATC...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCAACAATTGTGCTCTTaGGTATTTACCCAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTQQLCS*VFTQRS
Trigger: ACTCCTTTGGGTAAATACCAAAGAGCACAATTGTTG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCCTGGATATTTCAAATaGTTGTGTGTTGGTAACTGG +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTPGYFK*LCVGNW
Trigger: CCAGTTACCAACACACAACAATTTGAAATATCCAGG...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGCACTGTACAGTTCAGTaGATATGCTTTTTCTACCAA +
Preference number: 5 (lower is better)
Translates to: YVDVGILGKSLFSRALYSHCTVQ*ICFFYQ
Trigger: TTGGTAGAAAAAGCATATCAACTGAACTGTACAGTG...CGAGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTAGGAATCAGCTGAGTTaGGAGACTATTTTGATATCC +
Preference number: 5 (lower is better)
Translates to: SMWMWASWVNPYLAELCTRNQLS*ETILIS
Trigger: GGATATCAAAATAGTCTCCAAACTCAGCTGATTCCT...AGTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTACCTGGATGCAGCAATaGAAAAGTCCAATGGGATCA +
Preference number: 5 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVTWMQQ*KSPMGS
Trigger: TGATCCCATTGGACTTTTCAATTGCTGCATCCAGGT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTACCACAATCTGTGATCTaGGGCAAGTCAATTAGTGTC +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLPQSVI*GKSISV
Trigger: GACACTAATTGACTTGCCCAAGATCACAGATTGTGG...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACCATGTCATTGTACCTTaGTTCAAACCCATAGATTGT +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYHVIVP*FKPIDC
Trigger: ACAATCTATGGGTTTGAACAAAGGTACAATGACATG...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACCATAATTGCCAAAACTaGGAAGCAATCAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYHNCQN*EAINQD
Trigger: ATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTATG...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACCACTGCTGCTATCCATCCAATTGGATTCCTACAAAGCTTCAAACCACATTACATAATTGCCAAAACTaGGAAGCAATCAACCAAGAT +
Preference number: 5 (lower is better)
Translates to: YHCCYPSNWIPTKLQTTLHNCQN*EAINQD
Trigger: ATCTTGGTTGATTGCTTCCAAGTTTTGGCAATTATG...TAATGTGGTTTGAAGCTTTGTAGGAATCCAATTGGATGGATAGCAGCAGTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTATTGAAGTACTTTCTTaGCCACACAGTCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: HVITICSNSGLSSFYLLLIEVLS*PHSLPT
Trigger: TGTTGGGAGACTGTGTGGCAAAGAAAGTACTTCAAT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTTCCACACTTTACTGTaGTTTAGAGTTAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYFHTLL*FRVSCL
Trigger: CAAACAGCTAACTCTAAACAACAGTAAAGTGTGGAA...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTGTGATCTTGGGCAAGTCAATTAGTGTCTTTGGATCTGTTTCCAAATCAGTCTGCCAAAAATCTTCTTaGGTTACATTACCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SVILGKSISVFGSVSKSVCQKSS*VTLPAV
Trigger: AACAGCTGGTAATGTAACCAAAGAAGATTTTTGGCA...GACTGATTTGGAAACAGATCCAAAGACACTAATTGACTTGCCCAAGATCACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAGTATGTGGATGTGGGCATCTTGGGTAAATCCTTATTTAGCAGAGCTTTGTACTGCCAAAAATCTTCTTaGGTTACATTACCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: KYVDVGILGKSLFSRALYCQKSS*VTLPAV
Trigger: AACAGCTGGTAATGTAACCAAAGAAGATTTTTGGCA...GTACAAAGCTCTGCTAAATAAGGATTTACCCAAGATGCCCACATCCACATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCGGGTTTGCTCCAGATaGGATACTATCAGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYRVCSR*DTIRKK
Trigger: CTTCTTTCTGATAGTATCCAATCTGGAGCAAACCCG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS CCA 90 bp AAACACAATATAAAGCTCCATCTATTGGGTACTATGTTCACTATTTaGGTGACGGGTTCAGTTGAAGCCCAAACCTCAGTATATGTAATA +
Preference number: 5 (lower is better)
Translates to: KHNIKLHLLGTMFTI*VTGSVEAQTSVYVI
Trigger: TATTACATATACTGAGGTTTGGGCTTCAACTGAACCCGTCACCCAAATAGTGAACATAGTACCCAATAGATGGAGCTTTATATTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358678.7
CDS-3UTR CAA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTGAGAGATATACAGTGTaGCACGTAACAACAGAATCT +
Preference number: 5 (lower is better)
Translates to: HVITICSNSGLSSFYLLLERYTV*HVTTES
Trigger: AGATTCTGTTGTTACGTGCAACACTGTATATCTCTC...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTACCACACGTGCTATCTaGCATATCACTATCATTTCA +
Preference number: 5 (lower is better)
Translates to: HVITICSNSGLSSFYLLLTTRAI*HITIIS
Trigger: TGAAATGATAGTGATATGCAAGATAGCACGTGTGGT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGGTAAATCCTTATTTAGCAGAGCTTTGTACTCGGAAGAGAAGAAAATCTTCATGGGATCAATCCAAATaGCCACACTTAACCATGTTA +
Preference number: 5 (lower is better)
Translates to: WVNPYLAELCTRKRRKSSWDQSK*PHLTML
Trigger: TAACATGGTTAAGTGTGGCAATTTGGATTGATCCCA...TGAAGATTTTCTTCTCTTCCGAGTACAAAGCTCTGCTAAATAAGGATTTACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCACTGGACACATCTATaGCTAAAGGCACATTTCATC +
Preference number: 5 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYHWTHL*LKAHFI
Trigger: GATGAAATGTGCCTTTAGCAATAGATGTGTCCAGTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGCATGTCATTGTACCTTaGTTCAAACCCATAGATTGT +
Preference number: 5 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKHVIVP*FKPIDC
Trigger: ACAATCTATGGGTTTGAACAAAGGTACAATGACATG...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACAACAATTGTGCTCTTaGGTATTTACCCAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKQQLCS*VFTQRS
Trigger: ACTCCTTTGGGTAAATACCAAAGAGCACAATTGTTG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AATCACAGAGCTGCAGCTGTTTGCATGTGTTCTAAAGCTAGCATAATCTTTAAGCATTCAATCCAACAATaGTGCTCTTTGGTATTTACC +
Preference number: 5 (lower is better)
Translates to: NHRAAAVCMCSKASIIFKHSIQQ*CSLVFT
Trigger: GGTAAATACCAAAGAGCACAATTGTTGGATTGAATG...CTTAAAGATTATGCTAGCTTTAGAACACATGCAAACAGCTGCAGCTCTGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAATGGTGATTCAACGATaGCACTTACAGAAACAAATC +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKMVIQR*HLQKQI
Trigger: GATTTGTTTCTGTAAGTGCAATCGTTGAATCACCAT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp CATGTAATAACAATCTGTAGCAACTCTGGTCTTTCAAGCTTCTACCTTTTGCTTATGGTGATTCAACGATaGCACTTACAGAAACAAATC +
Preference number: 5 (lower is better)
Translates to: HVITICSNSGLSSFYLLLMVIQR*HLQKQI
Trigger: GATTTGTTTCTGTAAGTGCAATCGTTGAATCACCAT...AAGCAAAAGGTAGAAGCTTGAAAGACCAGAGTTGCTACAGATTGTTATTACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAAAGAAGAGACTAATTTaGACTAGAGGGGAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLKKRLI*TRGERR
Trigger: CCTTCTTTCCCCTCTAGTCAAAATTAGTCTCTTCTT...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAAGTCAATTAGTGTCTTaGGATCTGTTTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKSQLVS*DLFPNQ
Trigger: CTGATTTGGAAACAGATCCAAAGACACTAATTGACT...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAACAAATCGATTACGTTTaGGTGACAACTATTGTGAAG +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKQIDYV*VTTIVK
Trigger: CTTCACAATAGTTGTCACCAAAACGTAATCGATTTG...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTAGATGGATACATGTCATaGTACCTTTGTTCAAACCCA +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLDGYMS*YLCSNP
Trigger: TGGGTTTGAACAAAGGTACAATGACATGTATCCATC...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATAGTTGCATTCCTGCCTaGTATGAAAGAATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYSCIPA*YERILK
Trigger: CTTCAGAATTCTTTCATACAAGGCAGGAATGCAACT...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TTCATTCATGGTGGTGAGAATATAAAATGGTACAACCACTTTGCAAAAAGCGTTAGTTGCATTCCTGCCTaGTATGAAAGAATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FIHGGENIKWYNHFAKSVSCIPA*YERILK
Trigger: CTTCAGAATTCTTTCATACAAGGCAGGAATGCAACT...AACGCTTTTTGCAAAGTGGTTGTACCATTTTATATTCTCACCACCATGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TGGCACTATGGAAAAGTCCTAAATTGGAGACCGCACATAAATGAAACACTAAAAGGTTTCAGAGTCATCTaGTTTAATGTTGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: WHYGKVLNWRPHINETLKGFRVI*FNVGIL
Trigger: CAGAATACCAACATTAAACAAGATGACTCTGAAACC...TTTTAGTGTTTCATTTATGTGCGGTCTCCAATTTAGGACTTTTCCATAGTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp AAATTGAAAATGCTAGCCTGTCTTAAATATGCTCAGAACACTTACAGTAGCCTATTCCACACTTTACTGTaGTTTAGAGTTAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: KLKMLACLKYAQNTYSSLFHTLL*FRVSCL
Trigger: CAAACAGCTAACTCTAAACAACAGTAAAGTGTGGAA...TAGGCTACTGTAAGTGTTCTGAGCATATTTAAGACAGGCTAGCATTTTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TCTTTGCCACACAGTCTCCCAACATTTCTAAGAATCTTTGATGCTGATTATTATCACTGTACAGTTCAGTaGATATGCTTTTTCTACCAA +
Preference number: 5 (lower is better)
Translates to: SLPHSLPTFLRIFDADYYHCTVQ*ICFFYQ
Trigger: TTGGTAGAAAAAGCATATCAACTGAACTGTACAGTG...ATAATAATCAGCATCAAAGATTCTTAGAAATGTTGGGAGACTGTGTGGCAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549982.6
ENST00000552217.6
CDS-3UTR CAA 90 bp TACTTAGGGTTAATTTCCTCATGCAAAACACCACTTCAGAAGTTTGTTATTGCACACCACTTCAGAAGTTaGTTATTGCAAGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: YLGLISSCKTPLQKFVIAHHFRS*LLQENP
Trigger: TGGATTTTCTTGCAATAACAAACTTCTGAAGTGGTG...TGCAATAACAAACTTCTGAAGTGGTGTTTTGCATGAGGAAATTAACCCTAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548545.1
CDS TCA 72 bp GAGTCCAGGAGTTTAAAATCAGCCTGCGCAACACAGTaGGTGAGACCTTGCCTCGTCCATGAGGATACCAAC +
Preference number: 6 (lower is better)
Translates to: ESRSLKSACATQ*VRPCLVHEDTN
Trigger: GTTGGTATCCTCATGGACGAGGCAAGGTCTCACTCACTGTGTTGCGCAGGCTGATTTTAAACTCCTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547098.5
CDS TCA 72 bp CTGCGCAACACAGTGAGTGAGACCTTGCCTCGTCCATaGGGATACCAACGGTGCTTAGTAGTAAAGAACATT +
Preference number: 6 (lower is better)
Translates to: LRNTVSETLPRP*GYQRCLVVKNI
Trigger: AATGTTCTTTACTACTAAGCACCGTTGGTATCCTCATGGACGAGGCAAGGTCTCACTCACTGTGTTGCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547098.5
CDS TCA 72 bp GGGTACTATGTTCACTATTTGGGTGACGGGTTCAGTTaGAGCCCAAACCTCAGTATATGTAATACATCCACG +
Preference number: 6 (lower is better)
Translates to: GYYVHYLGDGFS*SPNLSICNTST
Trigger: CGTGGATGTATTACATATACTGAGGTTTGGGCTTCAACTGAACCCGTCACCCAAATAGTGAACATAGTACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358678.7
CDS TCA 72 bp AGCTCCATCTATTGGGTACTATGTTCACTATTTGGGTaGCGGGTTCAGTTGAAGCCCAAACCTCAGTATATG +
Preference number: 6 (lower is better)
Translates to: SSIYWVLCSLFG*RVQLKPKPQYM
Trigger: CATATACTGAGGTTTGGGCTTCAACTGAACCCGTCACCCAAATAGTGAACATAGTACCCAATAGATGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358678.7
CDS CCA 72 bp ATAAAGCTCCATCTATTGGGTACTATGTTCACTATTTaGGTGACGGGTTCAGTTGAAGCCCAAACCTCAGTA +
Preference number: 6 (lower is better)
Translates to: IKLHLLGTMFTI*VTGSVEAQTSV
Trigger: TACTGAGGTTTGGGCTTCAACTGAACCCGTCACCCAAATAGTGAACATAGTACCCAATAGATGGAGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358678.7