Pregenerated sensors for MRPL39 (Homo sapiens)
Ensembl gene IDs: ENSG00000154719Ensembl transcript IDs: ENST00000307301.11, ENST00000352957.9, ENST00000419219.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACATGTCCCAAGGCTGTCCATCCACCAGAGCCAGAATGGACTTCCTaGAATACCACTCGCTTAAATGCATGGCACAACTGTAGGGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: TCPKAVHPPEPEWTS*NTTRLNAWHNCREL Trigger: CAACTCCCTACAGTTGTGCCATGCATTTAAGCGAGTGGTATTGCAGGAAGTCCATTCTGGCTCTGGTGGATGGACAGCCTTGGGACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS CCA 90 bp | AAGGCTTATACATGTCCCAAGGCTGTCCATCCACCAGAGCCAGAATaGACTTCCTGCAATACCACTCGCTTAAATGCATGGCACAACTGT | + |
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Preference number: 5 (lower is better) Translates to: KAYTCPKAVHPPEPE*TSCNTTRLNAWHNC Trigger: ACAGTTGTGCCATGCATTTAAGCGAGTGGTATTGCAGGAAGTCCATTCTGGCTCTGGTGGATGGACAGCCTTGGGACATGTATAAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS GCA 90 bp | AACTTCTGGAGCTCTGACCAAATTGACCATATATTCATCTTTGAATaGCCTCTCTATCACACAGCCCATCATCATAGCACAGGAACGCCA | + |
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Preference number: 5 (lower is better) Translates to: NFWSSDQIDHIFIFE*PLYHTAHHHSTGTP Trigger: TGGCGTTCCTGTGCTATGATGATGGGCTGTGTGATAGAGAGGGCATTCAAAGATGAATATATGGTCAATTTGGTCAGAGCTCCAGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS TCA 90 bp | TTAAAGAGATCATTCCGCATTTCTGTCAATTCTGTCGGTGACAGCTaGGAAGCTGACGATGTTGCTATAAATCTCCATTTGATCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: LKRSFRISVNSVGDS*EADDVAINLHLIPP Trigger: TGGCGGGATCAAATGGAGATTTATAGCAACATCGTCAGCTTCTCAGCTGTCACCGACAGAATTGACAGAAATGCGGAATGATCTCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS GCA 90 bp | ACATGCTTAACTTCTATCTTCTCAGTTCGGGGAGTTAATGATAACTaGCTGGCTTTCTCTTTATTAAAGAGATCATTCCGCATTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: TCLTSIFSVRGVNDN*LAFSLLKRSFRISV Trigger: GACAGAAATGCGGAATGATCTCTTTAATAAAGAGAAAGCCAGGCAGTTATCATTAACTCCCCGAACTGAGAAGATAGAAGTTAAGCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS GCA 72 bp | TGTTGCTATAAATCTCCATTTGATCCCGCCACCGGGTaGGACCAGCCAGAGCCGCAGCGCCCGGGAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: CCYKSPFDPATG*DQPEPQRPGTH Trigger: ATGGGTTCCCGGGCGCTGCGGCTCTGGCTGGTCGCACCCGGTGGCGGGATCAAATGGAGATTTATAGCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS CCA 72 bp | ACATGTCCCAAGGCTGTCCATCCACCAGAGCCAGAATaGACTTCCTGCAATACCACTCGCTTAAATGCATGG | + |
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Preference number: 6 (lower is better) Translates to: TCPKAVHPPEPE*TSCNTTRLNAW Trigger: CCATGCATTTAAGCGAGTGGTATTGCAGGAAGTCCATTCTGGCTCTGGTGGATGGACAGCCTTGGGACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS GCA 72 bp | AAGGCTGTCCATCCACCAGAGCCAGAATGGACTTCCTaGAATACCACTCGCTTAAATGCATGGCACAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KAVHPPEPEWTS*NTTRLNAWHNC Trigger: ACAGTTGTGCCATGCATTTAAGCGAGTGGTATTGCAGGAAGTCCATTCTGGCTCTGGTGGATGGACAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS CAA 90 bp | CAGAAGGCACCAGAAATTACAGGAACTTCTGGAGCTCTGACCAAATaGACCATATATTCATCTTTGAATGCCCTCTCTATCACACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QKAPEITGTSGALTK*TIYSSLNALSITQP Trigger: GGGCTGTGTGATAGAGAGGGCATTCAAAGATGAATATATGGTCAATTTGGTCAGAGCTCCAGAAGTTCCTGTAATTTCTGGTGCCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307301.11 ENST00000352957.9 |
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| CDS CCA 72 bp | TTTACTTTGATCTTCAGTTACTCTGAGACTGTTCCATaGAGGAGGTACGACTCAGGCGAGGTAGTGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FTLIFSYSETVP*RRYDSGEVVKN Trigger: ATTCTTCACTACCTCGCCTGAGTCGTACCTCCTCCATGGAACAGTCTCAGAGTAACTGAAGATCAAAGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307301.11 |
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| CDS CAA 72 bp | CGTAAGTTCTCTTTTGTTGGCATCCACTCATCAAGTTaGCTATCCAAAACAGGAACTTCTGGAGCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: RKFSFVGIHSSS*LSKTGTSGALT Trigger: GGTCAGAGCTCCAGAAGTTCCTGTTTTGGATAGCAAACTTGATGAGTGGATGCCAACAAAAGAGAACTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419219.1 |
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| CDS CAA 90 bp | TCCTGCAATACCACTCGCTTAAATGCATGGCACAACTGTAGGGAGTaGAAATGTTTTTATTCATCACGAAGACAGTACCGGGGTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SCNTTRLNAWHNCRE*KCFYSSRRQYRGQF Trigger: AAACTGACCCCGGTACTGTCTTCGTGATGAATAAAAACATTTCAACTCCCTACAGTTGTGCCATGCATTTAAGCGAGTGGTATTGCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS CAA 90 bp | ACAGGAACTTCTGGAGCTCTGACCAAATTGACCATATATTCATCTTaGAATGCCCTCTCTATCACACAGCCCATCATCATAGCACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TGTSGALTKLTIYSS*NALSITQPIIIAQE Trigger: TTCCTGTGCTATGATGATGGGCTGTGTGATAGAGAGGGCATTCAAAGATGAATATATGGTCAATTTGGTCAGAGCTCCAGAAGTTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS TCA 72 bp | TCATTCCGCATTTCTGTCAATTCTGTCGGTGACAGCTaGGAAGCTGACGATGTTGCTATAAATCTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: SFRISVNSVGDS*EADDVAINLHL Trigger: CAAATGGAGATTTATAGCAACATCGTCAGCTTCTCAGCTGTCACCGACAGAATTGACAGAAATGCGGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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| CDS CAA 90 bp | TCAAGTTTGCTATCCAAAACAGGAACTTCTGGAGCTCTGACCAAATaGACCATATATTCATCTTTGAATGCCCTCTCTATCACACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSLLSKTGTSGALTK*TIYSSLNALSITQP Trigger: GGGCTGTGTGATAGAGAGGGCATTCAAAGATGAATATATGGTCAATTTGGTCAGAGCTCCAGAAGTTCCTGTTTTGGATAGCAAACTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419219.1 |
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| CDS CCA 72 bp | GAATGGACTTCCTGCAATACCACTCGCTTAAATGCATaGCACAACTGTAGGGAGTTGAAATGTTTTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: EWTSCNTTRLNA*HNCRELKCFYS Trigger: TGAATAAAAACATTTCAACTCCCTACAGTTGTGCCATGCATTTAAGCGAGTGGTATTGCAGGAAGTCCATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000307301.11 ENST00000352957.9 ENST00000419219.1 |
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