RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL34 (Homo sapiens)

Ensembl gene IDs: ENSG00000130312

Ensembl transcript IDs: ENST00000252602.2, ENST00000594999.1, ENST00000595444.1, ENST00000597996.1, ENST00000600434.5, ENST00000602206.1

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCCTCAATGGC +
Preference number: 1 (lower is better)
Translates to: APCKNSARQGPRRGR*FHEGPADCVAILNG
Trigger: GCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR GCA 90 bp GGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCA +
Preference number: 1 (lower is better)
Translates to: GCSLYCSLVCCAGSK*FLIKKPKKGLGKLP
Trigger: TGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR GCA 90 bp GGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGA +
Preference number: 1 (lower is better)
Translates to: GYWVHGCSLYCSLVC*AGSKCFLIKKPKKG
Trigger: TCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR GCA 90 bp CTTGGAGAGATACATTCTGAAATATTTACAGAAGAAATAATCCGATaGCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGG +
Preference number: 1 (lower is better)
Translates to: LGEIHSEIFTEEIIR*LRSASKELRMGQGR
Trigger: CCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTAAATATTTCAGAATGTATCTCTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR-3UTR GCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR TCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 2 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR GCA 90 bp CTCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: LPSRLQPHNMESTQVRGVPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...AACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR TCA 90 bp CATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 2 (lower is better)
Translates to: HPDFNPTIWRALRSEAFLRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...CAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR TCA 90 bp ATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGGGTTGTAGGAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 2 (lower is better)
Translates to: MPEISFKRTQDGAGTGCRRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...CCTACAACCCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR-3UTR GCA 90 bp ATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGGGTTGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: IRCLRSASKELRMGQGRVGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...AACCCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR-3UTR TCA 90 bp GGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCATTCGGCGAAGGATaGCCTGCACGCCGGCCGGCG +
Preference number: 2 (lower is better)
Translates to: GSQGTGYTDVLCTVLWSVAFGEG*PARRPA
Trigger: CGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGC...AACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR-3UTR GCA 90 bp CCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 2 (lower is better)
Translates to: PIQTSTPQYGEHSGPRRSCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...GGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR GCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 2 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR CCA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCACGTCGCGATCCTCAATaGCTCAGCGACTTGCGGCCC +
Preference number: 2 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCARRDPQ*LSDLRP
Trigger: GGGCCGCAAGTCGCTGAGCCATTGAGGATCGCGACG...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR-3UTR TCA 90 bp ATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGCTTCCTAATAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 2 (lower is better)
Translates to: MFFVLFFGLLRRFEMLPNRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...ATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR-3UTR GCA 90 bp ATATTTACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 2 (lower is better)
Translates to: IFTEEIIRCLRSASKELRPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...CCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR-3UTR GCA 90 bp AGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGTGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCT +
Preference number: 2 (lower is better)
Translates to: RNNPMPEISFKRTQDGAGCAGSK*FLIKKP
Trigger: AGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCA...CCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR-3UTR CCA 90 bp ATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGCTTCCTAATCTTTGTACTGTTCTTTaGTCTGTTGCGCAGGTTCGA +
Preference number: 2 (lower is better)
Translates to: MFFVLFFGLLRRFEMLPNLCTVL*SVAQVR
Trigger: TCGAACCTGCGCAACAGACCAAAGAACAGTACAAAG...ATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR-3UTR GCA 90 bp TTTGGATGTGATAAGCTTTGTAATTGTCTTTTAATGAGCTCTCATCTTGGAGAGTGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTC +
Preference number: 2 (lower is better)
Translates to: FGCDKLCNCLLMSSHLGECSLVC*AGSKCF
Trigger: GAAGCATTTCGAACCTGCGCAACAGACCAAAGAACA...CTCTCCAAGATGAGAGCTCATTAAAAGACAATTACAAAGCTTATCACATCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR TCA 72 bp CGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGTCGCGATCCTCAATGG +
Preference number: 3 (lower is better)
Translates to: RQARSEARAMLP*GSRRLRRDPQW
Trigger: CCATTGAGGATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR GCA 72 bp AGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTaGGTCGCGATCCTCAATGGCTCAGCGACTTGCGGC +
Preference number: 3 (lower is better)
Translates to: RRGRCFHEGPAD*VAILNGSATCG
Trigger: GCCGCAAGTCGCTGAGCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR GCA 72 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCCGACTGCGTCGCGATC +
Preference number: 3 (lower is better)
Translates to: KNSARQGPRRGR*FHEGPADCVAI
Trigger: GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
3UTR-3UTR CAA 90 bp ATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGGGTTCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 3 (lower is better)
Translates to: IRCLRSASKELRMGQGRVQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...AACCCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602206.1
3UTR-3UTR CAA 90 bp TCGGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGAGCCTAAAAAGGGACTaGGCAAGCTCCCATCCAGAC +
Preference number: 3 (lower is better)
Translates to: SVVRVLGTRMFFVLFFGLSLKRD*ASSHPD
Trigger: GTCTGGATGGGAGCTTGCCAAGTCCCTTTTTAGGCT...CAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR-3UTR CAA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAAGCCTAAAAAGGGACTaGGCAAGCTCCCATCCAGAC +
Preference number: 3 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCASLKRD*ASSHPD
Trigger: GTCTGGATGGGAGCTTGCCAAGTCCCTTTTTAGGCT...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR GCA 72 bp TTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGC +
Preference number: 3 (lower is better)
Translates to: LYCSLVCCAGSK*FLIKKPKKGLG
Trigger: GCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR GCA 72 bp GTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTCCTAATTAAAAAGCCT +
Preference number: 3 (lower is better)
Translates to: VHGCSLYCSLVC*AGSKCFLIKKP
Trigger: AGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
3UTR-3UTR CAA 90 bp ATATTTACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGGTACACGGATGTTCTTaGTACTGTTCTTTGGTCTGT +
Preference number: 3 (lower is better)
Translates to: IFTEEIIRCLRSASKELRVHGCS*YCSLVC
Trigger: ACAGACCAAAGAACAGTACAAAGAACATCCGTGTAC...CCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCATTCCCGCGAGCCTTaGCCCGGGCCTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADHSREP*PGPAAG
Trigger: CCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp GCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTCATTCCCGCGAGCCTTaGCCCGGGCCTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: APGKVRGEGDASMRVPPTHSREP*PGPAAG
Trigger: CCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATG...AGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGAGCATTCGGCGAAGGATaGCCTGCACGCCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRAFGEG*PARRPA
Trigger: CGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGC...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCATTCGGCGAAGGATaGCCTGCACGCCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVAFGEG*PARRPA
Trigger: CGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGC...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGACGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRRRRMT*TPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCG...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADSRSTG*GRFRSP
Trigger: TGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGA...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACGAGGGTCCCGCCGACTaGGTCGCGATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADEGPAD*VAILNG
Trigger: GCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTC...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCGAGGGTCCCGCCGACTaGGTCGCGATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIEGPAD*VAILNG
Trigger: GCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTC...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGACCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRSRSTG*GRFRSP
Trigger: TGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGA...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGCCGCGAGCCTACTCGTaGGGCCCAACAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: QGPRRGRCFHEGPADCVAPRAYS*GPTGIQ
Trigger: CTGGATCCCTGTTGGGCCCCACGAGTAGGCTCGCGG...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
CDS-3UTR CCA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGGGGCAGGCAGGCAGCTaGTCCCATCTCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: QGPRRGRCFHEGPADCVAGQAGS*SHLQAL
Trigger: TAGGGCCTGGAGATGGGACCAGCTGCCTGCCTGCCC...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594999.1
CDS-3UTR TCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGAGAGGGTCCCGCCGACTaGGTCGCGATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASREGPAD*VAILNG
Trigger: GCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTC...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCTCTACCGGAGCCACTaGCGGCGCCTCCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADLYRSH*RRLQKT
Trigger: TGTCTTCTGGAGGCGCCGGCAGTGGCTCCGGTAGAG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp GCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: APGKVRGEGDASMRVPPTLPTYS*GPTGIQ
Trigger: CTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAG...AGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp GCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTCAGCCATATCCGCAGTaGGTCCCGCAGTACCGGCTG +
Preference number: 4 (lower is better)
Translates to: APGKVRGEGDASMRVPPTQPYPQ*VPQYRL
Trigger: CAGCCGGTACTGCGGGACCCACTGCGGATATGGCTG...AGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCAGCCATATCCGCAGTaGGTCCCGCAGTACCGGCTG +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADQPYPQ*VPQYRL
Trigger: CAGCCGGTACTGCGGGACCCACTGCGGATATGGCTG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp CTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGCATTCCCGCGAGCCTTaGCCCGGGCCTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPAKIAPGKVRGEGDASMHSREP*PGPAAG
Trigger: CCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATG...CATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGAGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGACTCTACCGGAGCCACTaGCGGCGCCTCCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRLYRSH*RRLQKT
Trigger: TGTCTTCTGGAGGCGCCGGCAGTGGCTCCGGTAGAG...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCTCCACGAATTCCTaGTCTGGGAGCCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADCSTNS*SGSPSP
Trigger: AGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCA...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGACGTCGCGATCCTCAATaGCTCAGCGACTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRRRDPQ*LSDLRP
Trigger: GGGCCGCAAGTCGCTGAGCCATTGAGGATCGCGACG...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCGATGCTGGAATGCCCTaGGACGGTCAACACGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIDAGMP*DGQHAA
Trigger: AGCAGCGTGTTGACCGTCTCAGGGCATTCCAGCATC...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGAGGGCAGCCACATGGTaGTGCTGGAATGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGPRRGRCFHEGPADCVARAATW*CWNALR
Trigger: TCTCAGGGCATTCCAGCATCACCATGTGGCTGCCCT...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCTTGGTCCCCAGGGCTTaGCCACTACCAAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVLVPRA*PLPSGL
Trigger: GAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAA...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR GCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCGCCACCCAGCAACGCTaGCGACCTACTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFATQQR*RPTRGA
Trigger: GGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGC...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCCGCCGGACCCAGCCGTaGTTGTTCTTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIRRTQP*LFLRLM
Trigger: CATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCGAGCCCTGCGTCTTCTaGAGATCCTGCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIEPCVF*RSCSWH
Trigger: ATGCCAGGAGCAGGATCTGCAGAAGACGCAGGGCTC...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
3UTR CAA 72 bp CGTCGCGATCCTCAATGGCTCAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATGACCTGCACGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RRDPQWLSDLRP*SIRRRMTCTPA
Trigger: GGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTGAGGATCGCGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
CDS-3UTR TCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAILMLLG*YSFPRA
Trigger: GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAA...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGATGCTGGAATGCCCTaGGACGGTCAACACGCTGCT +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVDAGMP*DGQHAA
Trigger: AGCAGCGTGTTGACCGTCTCAGGGCATTCCAGCATC...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCACCCAGCAACGCTaGCGACCTACTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPATQQR*RPTRGA
Trigger: GGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGC...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: APGKVRGEGDASMRVPPTCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...AGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVSRSTG*GRFRSP
Trigger: TGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGA...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp CAATGGCTCAGCGACTTGCGGCCCTTGAGCATTCGGCGAAGGATGACCTGCACGAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: QWLSDLRPLSIRRRMTCTRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...CGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602206.1
CDS-3UTR GCA 90 bp AGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RQGPRRGRCFHEGPADCVCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...GACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCTCTCCTTGAGCCCTaGGTCTTCTGCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRSLLEP*VFCRSC
Trigger: GCAGGATCTGCAGAAGACGCAGGGCTCAAGGAGAGA...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR CCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFLPTYS*GPTGIQ
Trigger: CTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAG...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCACAAGAAGTAGCCGCTaGGCCGGCGGGGCATCGCTT +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFTRSSR*AGGASL
Trigger: AAGCGATGCCCCGCCGGCCCAGCGGCTACTTCTTGT...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCACGAATTCCTGCTCTaGGAGCCCGAGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVHEFLL*EPEPSP
Trigger: GGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTG...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp TCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTGCATTCGGCGAAGGATaGCCTGCACGCCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SRLQPHNMESTQVRGVPAAFGEG*PARRPA
Trigger: CGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGC...AGCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFRRRMT*TPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCG...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp CTCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSRLQPHNMESTQVRGVRRRMT*TPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCG...AACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGTTCAACCCCACAATATaGAGAGCACTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGPRRGRCFHEGPADCVAFNPTI*RALRSE
Trigger: CTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAA...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCTTCAACCCCACAATATaGAGAGCACTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAIFNPTI*RALRSE
Trigger: CTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAA...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCCTCCATGGAAGGCTTaGTCCCCAGGGCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFPPWKA*SPGLDH
Trigger: GTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGG...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR TCA 90 bp TCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTCGGGGCATCGCTTGGTaGGCACAGCCGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRLQPHNMESTQVRGVPARGIAW*AQPQQE
Trigger: CTCCTGCTGCGGCTGTGCTCACCAAGCGATGCCCCG...AGCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS-3UTR GCA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCGCCACCCAGCAACGCTaGCGACCTACTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCATQQR*RPTRGA
Trigger: GGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGC...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGGGTTGTAGGTAGTCGGGGGGCTGGAGCCACCTaGCACCCAGCAACGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSASKELRMGQGRVVGSRGAGAT*HPATLP
Trigger: CGGCAGCGTTGCTGGGTGGCAGGTGGCTCCAGCCCC...CCGACTACCTACAACCCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252602.2
CDS-3UTR GCA 90 bp TCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SRLQPHNMESTQVRGVPAPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...AGCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCCCAAGAACCCCTCCATaGAAGGCTTGGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPPRTPP*KAWSPG
Trigger: CCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTTGG...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR TCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCAGGGCAGCCACATGGTaGTGCTGGAATGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVRAATW*CWNALR
Trigger: TCTCAGGGCATTCCAGCATCACCATGTGGCTGCCCT...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCCGCCGGACCCAGCCGTaGTTGTTCTTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPRRTQP*LFLRLM
Trigger: CATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCGCCGGACCCAGCCGTaGTTGTTCTTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVRRTQP*LFLRLM
Trigger: CATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCGAGGGTCCCGCCGACTaGGTCGCGATCCTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFEGPAD*VAILNG
Trigger: GCCATTGAGGATCGCGACGCAGTCGGCGGGACCCTC...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCTGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: GPRRGRCFHEGPADCVAICSLVC*AGSKCF
Trigger: GAAGCATTTCGAACCTGCGCAACAGACCAAAGAACA...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CCA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGCTTTGTACTGTTCTTTaGTCTGTTGCGCAGGTTCGA +
Preference number: 4 (lower is better)
Translates to: QGPRRGRCFHEGPADCVALCTVL*SVAQVR
Trigger: TCGAACCTGCGCAACAGACCAAAGAACAGTACAAAG...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CCA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCTTTGTACTGTTCTTTaGTCTGTTGCGCAGGTTCGA +
Preference number: 4 (lower is better)
Translates to: SARQGPRRGRCFHEGPADLCTVL*SVAQVR
Trigger: TCGAACCTGCGCAACAGACCAAAGAACAGTACAAAG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CCA 90 bp CCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCCAGCCATATCCGCAGTaGGTCCCGCAGTACCGGCTG +
Preference number: 4 (lower is better)
Translates to: PIQTSTPQYGEHSGPRRSQPYPQ*VPQYRL
Trigger: CAGCCGGTACTGCGGGACCCACTGCGGATATGGCTG...GGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR TCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPLMLLG*YSFPRA
Trigger: GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAA...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp ACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGACATTCCCGCGAGCCTTaGCCCGGGCCTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TGYTDVLCTVLWSVAQVRHSREP*PGPAAG
Trigger: CCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATG...TCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000595444.1
CDS-3UTR GCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp CTCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LPSRLQPHNMESTQVRGVGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...AACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp AAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: KVRGEGDASMRVPPTASRCSLVC*AGSKCF
Trigger: GAAGCATTTCGAACCTGCGCAACAGACCAAAGAACA...TCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFLPTYS*GPTGIQ
Trigger: CTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAG...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp CATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGACAAGAAGTAGCCGCTaGGCCGGCGGGGCATCGCTT +
Preference number: 4 (lower is better)
Translates to: HPDFNPTIWRALRSEAFLTRSSR*AGGASL
Trigger: AAGCGATGCCCCGCCGGCCCAGCGGCTACTTCTTGT...CAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCACGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCARRRMT*TPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCG...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR GCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCATGGTGATGCTGGAATaGCCTGAGACGGTCAACACG +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVMVMLE*PETVNT
Trigger: CGTGTTGACCGTCTCAGGGCATTCCAGCATCACCAT...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp CCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCGAGCCCTGCGTCTTCTaGAGATCCTGCTCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PIQTSTPQYGEHSGPRRSEPCVF*RSCSWH
Trigger: ATGCCAGGAGCAGGATCTGCAGAAGACGCAGGGCTC...GGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp TCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTCCAGCCCTTGAGCCCTaGGTCTTCTGCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLQPHNMESTQVRGVPAPALEP*VFCRSC
Trigger: GCAGGATCTGCAGAAGACGCAGGGCTCAAGGGCTGG...AGCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS-3UTR TCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCGCTTGTTCTTGCGTTTaGTGTTGCTCGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFACSCV*CCSADT
Trigger: AGTATCAGCCGAGCAACATCAAACGCAAGAACAAGC...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGCCACCCAGCAACGCTaGCGACCTACTCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCAATQQR*RPTRGA
Trigger: GGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGC...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000595444.1
CDS-3UTR GCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCGCCGGACCCAGCCGTaGTTGTTCTTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFRRTQP*LFLRLM
Trigger: CATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCCGAGGCGAGGGCGATaGTTCCATGAGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GTGYTDVLCTVLWSVAQVPRRGR*FHEGPA
Trigger: GGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGG...AACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CCA 90 bp CTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGTTCAACCCCACAATATaGAGAGCACTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LPAKIAPGKVRGEGDASMFNPTI*RALRSE
Trigger: CTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAA...CATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCTTCAACCCCACAATATaGAGAGCACTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPFNPTI*RALRSE
Trigger: CTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAA...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp GCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCTTCAACCCCACAATATaGAGAGCACTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: AKIAPGKVRGEGDASMRVFNPTI*RALRSE
Trigger: CTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAA...GACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CCA 90 bp CCAGCTCCCTGCAAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCTTGACCACTACCAAGTaGCCTCATTCTCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: PAPCKNSARQGPRRGRCFLTTTK*PHSLLE
Trigger: CTCAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAA...GAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTTGCAGGGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR GCA 90 bp ACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TEEIIRCLRSASKELRMGRRRMT*TPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCG...CCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR GCA 90 bp CATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGTGCTCCCCAGCTCCCTaGAAAAATAGCGCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: HPDFNPTIWRALRSEAFLCSPAP*KNSARQ
Trigger: TTGCCTGGCGCTATTTTTGCAGGGAGCTGGGGAGCA...CAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp GAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: EEIIRCLRSASKELRMGQRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...CTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR TCA 90 bp GGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGAGCCGCTCCAGCCCTTaGGCCCTGCGTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTRMFFVLFFGLLRRFEMSRSSP*ALRLLQ
Trigger: CTGCAGAAGACGCAGGGCTCAAGGGCTGGAGCGGCT...CATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS-3UTR GCA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCAGACGGTCAACACGCTaGTCCACGAATTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCRRSTR*STNSCS
Trigger: AGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCT...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCAGACGGTCAACACGCTaGTCCACGAATTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFRRSTR*STNSCS
Trigger: AGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCT...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR GCA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCATGGTGATGCTGGAATaGCCTGAGACGGTCAACACG +
Preference number: 4 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCMVMLE*PETVNT
Trigger: CGTGTTGACCGTCTCAGGGCATTCCAGCATCACCAT...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CCA 90 bp GGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GTGYTDVLCTVLWSVAQVLPTYS*GPTGIQ
Trigger: CTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAG...AACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000595444.1
CDS-3UTR CCA 90 bp GGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGCACGAATTCCTGCTCTaGGAGCCCGAGCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GTRMFFVLFFGLLRRFEMHEFLL*EPEPSP
Trigger: GGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTG...CATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS-3UTR GCA 90 bp GGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GSQGTGYTDVLCTVLWSVGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...AACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR TCA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCGCTTGTTCTTGCGTTTaGTGTTGCTCGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFACSCV*CCSADT
Trigger: AGTATCAGCCGAGCAACATCAAACGCAAGAACAAGC...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp TCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTGCTTGTTCTTGCGTTTaGTGTTGCTCGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: SRLQPHNMESTQVRGVPAACSCV*CCSADT
Trigger: AGTATCAGCCGAGCAACATCAAACGCAAGAACAAGC...AGCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR TCA 90 bp TCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCATCCAGGGCGATGCTTCCATaGGGGTCCCGCCGACTGCGT +
Preference number: 4 (lower is better)
Translates to: SKCFLIKKPKKGLGKLPSRAMLP*GSRRLR
Trigger: ACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCT...GGATGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR TCA 90 bp GTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VLGTRMFFVLFFGLLRRFLMLLG*YSFPRA
Trigger: GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAA...GAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR TCA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCATTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCALMLLG*YSFPRA
Trigger: GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAA...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR GCA 90 bp TACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGGTCCGAGGCGTTCCTaGTCCCCAGCTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YRRNNPMPEISFKRTQDGGPRRS*SPAPCK
Trigger: TTTGCAGGGAGCTGGGGAGCAGGAACGCCTCGGACC...CCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR GCA 90 bp CCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGCAGGGACGGGTTGTTGTTCTTTGGTCTGTTaGGCAGGTTCGAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: PMPEISFKRTQDGAGTGCCSLVC*AGSKCF
Trigger: GAAGCATTTCGAACCTGCGCAACAGACCAAAGAACA...ACAACCCGTCCCTGCCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR TCA 90 bp TTTGGATGTGATAAGCTTTGTAATTGTCTTTTAATGAGCTCTCATCTTGGAGAGGCATTCGGCGAAGGATaGCCTGCACGCCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: FGCDKLCNCLLMSSHLGEAFGEG*PARRPA
Trigger: CGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGC...CTCTCCAAGATGAGAGCTCATTAAAAGACAATTACAAAGCTTATCACATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR GCA 90 bp TCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCATCCTGCTCCACGAATTCCTaGTCTGGGAGCCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SKCFLIKKPKKGLGKLPSCSTNS*SGSPSP
Trigger: AGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCA...GGATGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS-3UTR TCA 90 bp TCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCATCCTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SKCFLIKKPKKGLGKLPSLMLLG*YSFPRA
Trigger: GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAA...GGATGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR GCA 90 bp ATATTTACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGCGCCGGACCCAGCCGTaGTTGTTCTTGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: IFTEEIIRCLRSASKELRRRTQP*LFLRLM
Trigger: CATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG...CCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
3UTR CAA 72 bp GGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTaGGTCTGTTGCGCAGGTTCGAAATGCTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: GYWVHGCSLYCS*VCCAGSKCFLI
Trigger: AATTAGGAAGCATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR GCA 90 bp GGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTTGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GTGYTDVLCTVLWSVAQVCAGSK*FLIKKP
Trigger: AGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCA...AACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR TCA 90 bp ATATTTACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGGCTTGTTCTTGCGTTTaGTGTTGCTCGGCTGATACT +
Preference number: 4 (lower is better)
Translates to: IFTEEIIRCLRSASKELRACSCV*CCSADT
Trigger: AGTATCAGCCGAGCAACATCAAACGCAAGAACAAGC...CCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR GCA 90 bp TCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCATCCTGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SKCFLIKKPKKGLGKLPSCAGSK*FLIKKP
Trigger: AGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCA...GGATGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR GCA 90 bp GGATGTGATAAGCTTTGTAATTGTCTTTTAATGAGCTCTCATCTTGGAGAGATATGCGCAGGTTCGAAATaGTTCCTAATTAAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GCDKLCNCLLMSSHLGEICAGSK*FLIKKP
Trigger: AGGCTTTTTAATTAGGAAGCATTTCGAACCTGCGCA...TATCTCTCCAAGATGAGAGCTCATTAAAAGACAATTACAAAGCTTATCACATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS GCA 90 bp TGCTCTGGGAGCCCGAGCCCTCGCCCAAGGCTCTACCGGAGCCACTaGCGGCGCCTCCAGAAGACAAGAAGTAGCCGCTGGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: CSGSPSPRPRLYRSH*RRLQKTRSSRWAGG
Trigger: CCCGCCGGCCCAGCGGCTACTTCTTGTCTTCTGGAGGCGCCGGCAGTGGCTCCGGTAGAGCCTTGGGCGAGGGCTCGGGCTCCCAGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS GCA 90 bp TGGCTCAGCGACTTGCGGCCCTTGAGCATTCGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTCAGGCGCCGGACCCAGCCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: WLSDLRPLSIRRRMT*TPAGVLRRRTQPCL
Trigger: CAAGCACGGCTGGGTCCGGCGCCTGAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS GCA 90 bp TCCAGCCAAGACAGCCATATCCGCAGTGGGTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCAGAGCCGCTCCAGCCCTTAGCGGCG +
Preference number: 5 (lower is better)
Translates to: SSQDSHIRSGSRSTG*GRFRSPEPLQPLAA
Trigger: CGCCGCTAAGGGCTGGAGCGGCTCTGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTCTTGGCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594999.1
CDS CCA 90 bp TACCGGAGCCACTGCCGGCGCCTCCAGAAGACAAGAAGTAGCCGCTaGGCCGGCGGGGCATCGCTTGGTGAGCACAGCCGCAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: YRSHCRRLQKTRSSR*AGGASLGEHSRSRR
Trigger: CCTCCTGCTGCGGCTGTGCTCACCAAGCGATGCCCCGCCGGCCCAGCGGCTACTTCTTGTCTTCTGGAGGCGCCGGCAGTGGCTCCGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS GCA 90 bp TCCAGCCAAGACAGCCATATCCGCAGTGGGTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCAGAGCCGCTCCAGCCCTTGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSQDSHIRSGSRSTG*GRFRSPEPLQPLSP
Trigger: AGGGCTCAAGGGCTGGAGCGGCTCTGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTCTTGGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS GCA 90 bp TCCAGCCAAGACAGCCATATCCGCAGTGGGTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCAGAGCCGCTCCAGCCCAAGAACCCC +
Preference number: 5 (lower is better)
Translates to: SSQDSHIRSGSRSTG*GRFRSPEPLQPKNP
Trigger: GGGGTTCTTGGGCTGGAGCGGCTCTGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTCTTGGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS CCA 90 bp TCGTGGGGCCCAACAGGGATCCAGCCAAGACAGCCATATCCGCAGTaGGTCCCGCAGTACCGGCTGCGGGCGATTCCGGAGCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SWGPTGIQPRQPYPQ*VPQYRLRAIPEPRA
Trigger: GGCTCTGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS CCA 90 bp GGGGCTGGAGCCACCTGCCACCCAGCAACGCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAGCCAAGACAGCCATATCCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GAGATCHPATLPTYS*GPTGIQPRQPYPQW
Trigger: CCACTGCGGATATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGCAGGTGGCTCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CAA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: SARQGPRRGRCFHEGPADSDLRP*SIRRRM
Trigger: CATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCT...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGATCAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: GPRRGRCFHEGPADCVAISDLRP*SIRRRM
Trigger: CATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCT...GATCGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp CAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACTGCGTCGCGCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 5 (lower is better)
Translates to: QGPRRGRCFHEGPADCVAQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...CGCGACGCAGTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 5 (lower is better)
Translates to: SARQGPRRGRCFHEGPADQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS TCA 90 bp CGCCGGACCCAGCCGTGCTTGTTCTTGCGTTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCCTTGCCCCGGGCCTGCTGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: RRTQPCLFLRLMLLG*YSFPRALPRACCGV
Trigger: CACCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS CCA 90 bp GAATGCCCTGAGACGGTCAACACGCTGCTCCACGAATTCCTGCTCTaGGAGCCCGAGCCCTCGCCCAAGGCTCTACCGGAGCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: ECPETVNTLLHEFLL*EPEPSPKALPEPLP
Trigger: CGGCAGTGGCTCCGGTAGAGCCTTGGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCTCAGGGCATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CAA 90 bp GACTTGCGGCCCTTGAGCATTCGGCGAAGGATGACCTGCACGCCGGCCGGCGTGAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: DLRPLSIRRRMTCTPAGVSDLRP*SIRRRM
Trigger: CATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCT...CACGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602206.1
CDS-3UTR CAA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCCCGGCGGGGCATCGCTaGGTGAGCACAGCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPPAGHR*VSTAAA
Trigger: TGCTGCGGCTGTGCTCACCAAGCGATGCCCCGCCGG...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS GCA 90 bp TGCTGGAATGCCCTGAGACGGTCAACACGCTGCTCCACGAATTCCTaGTCTGGGAGCCCGAGCCCTCGCCCAAGGCTCTACCGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: CWNALRRSTRCSTNS*SGSPSPRPRLYRSH
Trigger: GTGGCTCCGGTAGAGCCTTGGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCTCAGGGCATTCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CAA 90 bp AGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCGCCGACCAGCCGTGCTTGTTCTaGCGTTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SARQGPRRGRCFHEGPADQPCLF*RLMLLG
Trigger: GCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG...GTCGGCGGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp AAAAATAGCGCCAGGCAAGGTCCGAGGCGAGGGCGATGCTTCCATGAGGGTCCCAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: KNSARQGPRRGRCFHEGPSDLRP*SIRRRM
Trigger: CATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCT...GGGACCCTCATGGAAGCATCGCCCTCGCCTCGGACCTTGCCTGGCGCTATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS TCA 90 bp CTCCAGCCCAAGAACCCCTCCATGGAAGGCTTGGTCCCCAGGGCTTaGCCACTACCAAGTGGCCTCATTCTCTCCTTGAGCCCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: LQPKNPSMEGLVPRA*PLPSGLILSLSPAS
Trigger: AGACGCAGGGCTCAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTTGGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR CAA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCGAGCCGCTCCAGCCCTaGAGCCCTGCGTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFEPLQP*SPASSA
Trigger: TGCAGAAGACGCAGGGCTCAAGGGCTGGAGCGGCTC...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS GCA 90 bp TTCCTGAAGCTCATCGACGAGGGCAGCCACATGGTGATGCTGGAATaGCCTGAGACGGTCAACACGCTGCTCCACGAATTCCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FLKLIDEGSHMVMLE*PETVNTLLHEFLLW
Trigger: CCAGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCTCAGGGCATTCCAGCATCACCATGTGGCTGCCCTCGTCGATGAGCTTCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS-3UTR CAA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 5 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp CTCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 5 (lower is better)
Translates to: LPSRLQPHNMESTQVRGVQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...AACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp CATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCTTGGTCCCCAGGGCTaGACCACTACCAAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HPDFNPTIWRALRSEAFLLGPQG*TTTKWP
Trigger: AGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAG...CAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR CAA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCGGCCTCATTCTCTCCTaGAGCCCTGCGTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFGLILS*SPASSA
Trigger: TGCAGAAGACGCAGGGCTCAAGGAGAGAATGAGGCC...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS-3UTR CAA 90 bp CATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCAGCCGTGCTTGTTCTaGCGTTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: HPDFNPTIWRALRSEAFLQPCLF*RLMLLG
Trigger: GCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG...CAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp CTCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCAGCCGTGCTTGTTCTaGCGTTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: LPSRLQPHNMESTQVRGVQPCLF*RLMLLG
Trigger: GCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG...AACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCCAGCCGTGCTTGTTCTaGCGTTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCQPCLF*RLMLLG
Trigger: GCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp ATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCTGCCGGACCCAGCCGTGCTaGTTCTTGCGTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: IQTSTPQYGEHSGPRRSCRTQPC*FLRLML
Trigger: CAACATCAAACGCAAGAACAAGCACGGCTGGGTCCG...GCAGGAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS-3UTR CAA 90 bp TCCCATCCAGACTTCAACCCCACAATATGGAGAGCACTCAGGTCCGAGGCGTTCCGGACCCAGCCGTGCTaGTTCTTGCGTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SHPDFNPTIWRALRSEAFRTQPC*FLRLML
Trigger: CAACATCAAACGCAAGAACAAGCACGGCTGGGTCCG...GAACGCCTCGGACCTGAGTGCTCTCCATATTGTGGGGTTGAAGTCTGGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS CCA 90 bp CCCCTCCATGGAAGGCTTGGTCCCCAGGGCTTGACCACTACCAAGTaGCCTCATTCTCTCCTTTATCCAGGAAGAAAGGCAAGATTGAAC +
Preference number: 5 (lower is better)
Translates to: PLHGRLGPQGLTTTK*PHSLLYPGRKARLN
Trigger: GTTCAATCTTGCCTTTCTTCCTGGATAAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS-3UTR CAA 90 bp GTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCCGGACCCAGCCGTGCTaGTTCTTGCGTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VRVLGTRMFFVLFFGLLRRTQPC*FLRLML
Trigger: CAACATCAAACGCAAGAACAAGCACGGCTGGGTCCG...GCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: GTRMFFVLFFGLLRRFEMSDLRP*SIRRRM
Trigger: CATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCT...CATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS TCA 90 bp AAACTTACCAAGAACCCCTCCATGGAAGGCTTGGTCCCCAGGGCTTaGCCACTACCAAGTGGCCTCATTCTCTCCTTTATCCAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: KLTKNPSMEGLVPRA*PLPSGLILSFIQEE
Trigger: TTCTTCCTGGATAAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTTGGTAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS-3UTR CAA 90 bp TCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCACAGCCGTGCTTGTTCTaGCGTTTGATGTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SGYWVHGCSLYCSLVCCAQPCLF*RLMLLG
Trigger: GCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG...TGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTCGGACCCAGCCGTGCTaGTTCTTGCGTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GSQGTGYTDVLCTVLWSVRTQPC*FLRLML
Trigger: CAACATCAAACGCAAGAACAAGCACGGCTGGGTCCG...AACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp TCGAAATGCTTCCTAATTAAAAAGCCTAAAAAGGGACTTGGCAAGCTCCCATCCCAATGGCTCAGCGACTaGCGGCCCTTGAGCATTCGG +
Preference number: 5 (lower is better)
Translates to: SKCFLIKKPKKGLGKLPSQWLSD*RPLSIR
Trigger: CCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTG...GGATGGGAGCTTGCCAAGTCCCTTTTTAGGCTTTTTAATTAGGAAGCATTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTAGCCTAAAAAGGGACTaGGCAAGCTCCCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: GSQGTGYTDVLCTVLWSVSLKRD*ASSHPD
Trigger: GTCTGGATGGGAGCTTGCCAAGTCCCTTTTTAGGCT...AACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp ACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGGAGCCTAAAAAGGGACTaGGCAAGCTCCCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: TEEIIRCLRSASKELRMGSLKRD*ASSHPD
Trigger: GTCTGGATGGGAGCTTGCCAAGTCCCTTTTTAGGCT...CCCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS TCA 90 bp CCAAGTGGCCTCATTCTCTCCTTTATCCAGGAAGAAAGGCAAGATTaGACAGCCAGGCAAGTTGAGCACCACTGTTTTAGAGATTCTAGC +
Preference number: 5 (lower is better)
Translates to: PSGLILSFIQEERQD*TARQVEHHCFRDSS
Trigger: GCTAGAATCTCTAAAACAGTGGTGCTCAACTTGCCTGGCTGTTCAATCTTGCCTTTCTTCCTGGATAAAGGAGAGAATGAGGCCACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS-3UTR CAA 90 bp TACAGAAGAAATAATCCGATGCCTGAGATCAGCTTCAAAAGAACTCAGGATGGGAGCCTAAAAAGGGACTaGGCAAGCTCCCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: YRRNNPMPEISFKRTQDGSLKRD*ASSHPD
Trigger: GTCTGGATGGGAGCTTGCCAAGTCCCTTTTTAGGCT...CCCATCCTGAGTTCTTTTGAAGCTGATCTCAGGCATCGGATTATTTCTTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252602.2
ENST00000602206.1
CDS-3UTR CAA 90 bp GTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCGTACACGGATGTTCTTaGTACTGTTCTTTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: VRVLGTRMFFVLFFGLLRVHGCS*YCSLVC
Trigger: ACAGACCAAAGAACAGTACAAAGAACATCCGTGTAC...GCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTAGTCAGGGTACTGGGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGTACACGGATGTTCTTaGTACTGTTCTTTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GSQGTGYTDVLCTVLWSVVHGCS*YCSLVC
Trigger: ACAGACCAAAGAACAGTACAAAGAACATCCGTGTAC...AACAGACCAAAGAACAGTACAAAGAACATCCGTGTACCCAGTACCCTGACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS-3UTR CAA 90 bp GGTACACGGATGTTCTTTGTACTGTTCTTTGGTCTGTTGCGCAGGTTCGAAATGGTACACGGATGTTCTTaGTACTGTTCTTTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GTRMFFVLFFGLLRRFEMVHGCS*YCSLVC
Trigger: ACAGACCAAAGAACAGTACAAAGAACATCCGTGTAC...CATTTCGAACCTGCGCAACAGACCAAAGAACAGTACAAAGAACATCCGTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252602.2
ENST00000595444.1
ENST00000602206.1
CDS GCA 72 bp GGCCCGGGGCTGGAGCCACCTGCCACCCAGCAACGCTaGCGACCTACTCGTGGGGCCCAACAGGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: GPGLEPPATQQR*RPTRGAQQGSS
Trigger: GCTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGCAGGTGGCTCCAGCCCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS GCA 72 bp GACTTGCGGCCCTTGAGCATTCGGCGAAGGATGACCTaGACGCCGGCCGGCGTGCTCAGGCGCCGGACCCAG +
Preference number: 6 (lower is better)
Translates to: DLRPLSIRRRMT*TPAGVLRRRTQ
Trigger: CTGGGTCCGGCGCCTGAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS GCA 72 bp GACAGCCATATCCGCAGTGGGTCCCGCAGTACCGGCTaGGGGCGATTCCGGAGCCCAGAGCCGCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DSHIRSGSRSTG*GRFRSPEPLQP
Trigger: GGGCTGGAGCGGCTCTGGGCTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS CCA 72 bp CACTGCCGGCGCCTCCAGAAGACAAGAAGTAGCCGCTaGGCCGGCGGGGCATCGCTTGGTGAGCACAGCCGC +
Preference number: 6 (lower is better)
Translates to: HCRRLQKTRSSR*AGGASLGEHSR
Trigger: GCGGCTGTGCTCACCAAGCGATGCCCCGCCGGCCCAGCGGCTACTTCTTGTCTTCTGGAGGCGCCGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595444.1
CDS CAA 90 bp CGCCGACTGCGTCGCGATCCTCAATGGCTCAGCGACTTGCGGCCCTaGAGCATTCGGCGAAGGATGACCTGCACGCCGGCCGGCGTGCTC +
Preference number: 6 (lower is better)
Translates to: RRLRRDPQWLSDLRP*SIRRRMTCTPAGVL
Trigger: GAGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTGAGGATCGCGACGCAGTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS GCA 72 bp AGCCCGAGCCCTCGCCCAAGGCTCTACCGGAGCCACTaGCGGCGCCTCCAGAAGACAAGAAGTAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: SPSPRPRLYRSH*RRLQKTRSSRW
Trigger: CCAGCGGCTACTTCTTGTCTTCTGGAGGCGCCGGCAGTGGCTCCGGTAGAGCCTTGGGCGAGGGCTCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS GCA 72 bp GCCCTGAGACGGTCAACACGCTGCTCCACGAATTCCTaGTCTGGGAGCCCGAGCCCTCGCCCAAGGCTCTAC +
Preference number: 6 (lower is better)
Translates to: ALRRSTRCSTNS*SGSPSPRPRLY
Trigger: GTAGAGCCTTGGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCTCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS CCA 72 bp GAGACGGTCAACACGCTGCTCCACGAATTCCTGCTCTaGGAGCCCGAGCCCTCGCCCAAGGCTCTACCGGAG +
Preference number: 6 (lower is better)
Translates to: ETVNTLLHEFLL*EPEPSPKALPE
Trigger: CTCCGGTAGAGCCTTGGGCGAGGGCTCGGGCTCCCAGAGCAGGAATTCGTGGAGCAGCGTGTTGACCGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS CCA 72 bp CCAACAGGGATCCAGCCAAGACAGCCATATCCGCAGTaGGTCCCGCAGTACCGGCTGCGGGCGATTCCGGAG +
Preference number: 6 (lower is better)
Translates to: PTGIQPRQPYPQ*VPQYRLRAIPE
Trigger: CTCCGGAATCGCCCGCAGCCGGTACTGCGGGACCCACTGCGGATATGGCTGTCTTGGCTGGATCCCTGTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS CCA 72 bp GCCACCTGCCACCCAGCAACGCTGCCGACCTACTCGTaGGGCCCAACAGGGATCCAGCCAAGACAGCCATAT +
Preference number: 6 (lower is better)
Translates to: ATCHPATLPTYS*GPTGIQPRQPY
Trigger: ATATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGCAGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS CCA 72 bp AGCCGCTCCAGCCCAAGAACCCCTCCATGGAAGGCTTaGTCCCCAGGGCTTGACCACTACCAAGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SRSSPRTPPWKA*SPGLDHYQVAS
Trigger: TGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTTGGGCTGGAGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS TCA 72 bp CAGCCGTGCTTGTTCTTGCGTTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCCTTGCCCCGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: QPCLFLRLMLLG*YSFPRALPRAC
Trigger: GCAGGCCCGGGGCAAGGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
CDS TCA 72 bp TCAGGCGCCGGACCCAGCCGTGCTTGTTCTTGCGTTTaGTGTTGCTCGGCTGATACTCATTCCCGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: SGAGPSRACSCV*CCSADTHSREP
Trigger: AGGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252602.2
ENST00000594999.1
ENST00000595444.1
ENST00000600434.5
ENST00000602206.1
CDS CCA 72 bp GGAAGGCTTGGTCCCCAGGGCTTGACCACTACCAAGTaGCCTCATTCTCTCCTTGAGCCCTGCGTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GRLGPQGLTTTK*PHSLLEPCVFC
Trigger: GCAGAAGACGCAGGGCTCAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS TCA 72 bp CAGCCGTGCTTGTTCTTGCGTTTGATGTTGCTCGGCTaGTACTCATTCCCGCGAGCCTACTCGTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: QPCLFLRLMLLG*YSFPRAYSWGP
Trigger: TGGGCCCCACGAGTAGGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAAACGCAAGAACAAGCACGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602206.1
CDS GCA 72 bp CTCATCGACGAGGGCAGCCACATGGTGATGCTGGAATaGCCTGAGACGGTCAACACGCTGCTCCACGAATTC +
Preference number: 6 (lower is better)
Translates to: LIDEGSHMVMLE*PETVNTLLHEF
Trigger: GAATTCGTGGAGCAGCGTGTTGACCGTCTCAGGGCATTCCAGCATCACCATGTGGCTGCCCTCGTCGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595444.1
ENST00000600434.5
CDS TCA 72 bp AAGAACCCCTCCATGGAAGGCTTGGTCCCCAGGGCTTaGCCACTACCAAGTGGCCTCATTCTCTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: KNPSMEGLVPRA*PLPSGLILSLS
Trigger: GCTCAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600434.5
CDS TCA 72 bp AAGAACCCCTCCATGGAAGGCTTGGTCCCCAGGGCTTaGCCACTACCAAGTGGCCTCATTCTCTCCTTTATC +
Preference number: 6 (lower is better)
Translates to: KNPSMEGLVPRA*PLPSGLILSFI
Trigger: GATAAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCCATGGAGGGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS CCA 72 bp GGAAGGCTTGGTCCCCAGGGCTTGACCACTACCAAGTaGCCTCATTCTCTCCTTTATCCAGGAAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: GRLGPQGLTTTK*PHSLLYPGRKA
Trigger: TGCCTTTCTTCCTGGATAAAGGAGAGAATGAGGCCACTTGGTAGTGGTCAAGCCCTGGGGACCAAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS CAA 72 bp TCCAGGAAGAAAGGCAAGATTGAACAGCCAGGCAAGTaGAGCACCACTGTTTTAGAGATTCTAGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SRKKGKIEQPGK*STTVLEILAWV
Trigger: CACCCAGGCTAGAATCTCTAAAACAGTGGTGCTCAACTTGCCTGGCTGTTCAATCTTGCCTTTCTTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597996.1
CDS TCA 72 bp CTCATTCTCTCCTTTATCCAGGAAGAAAGGCAAGATTaGACAGCCAGGCAAGTTGAGCACCACTGTTTTAGA +
Preference number: 6 (lower is better)
Translates to: LILSFIQEERQD*TARQVEHHCFR
Trigger: TCTAAAACAGTGGTGCTCAACTTGCCTGGCTGTTCAATCTTGCCTTTCTTCCTGGATAAAGGAGAGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597996.1