RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL33 (Homo sapiens)

Ensembl gene IDs: ENSG00000243147

Ensembl transcript IDs: ENST00000296102.8, ENST00000379666.7, ENST00000448427.1, ENST00000476552.1, ENST00000483992.5

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCATCTTCTCCAAAGATAAAATCGGGAGGCAGTTCTGGGTATTaGGCATTGAAAATGATATCCCACTTTAATGTCTCTCCAGCATAT +
Preference number: 1 (lower is better)
Translates to: SASSPKIKSGGSSGY*ALKMISHFNVSPAY
Trigger: ATATGCTGGAGAGACATTAAAGTGGGATATCATTTTCAATGCCCAATACCCAGAACTGCCTCCCGATTTTATCTTTGGAGAAGATGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
3UTR TCA 90 bp ATTCCATGCCATTTCCTCTTCTTTTATTACACGCTACAGGATTTCTaGATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCAAAGT +
Preference number: 1 (lower is better)
Translates to: IPCHFLFFYYTLQDF*ISIPALSLLFINQS
Trigger: ACTTTGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGTGTAATAAAAGAAGAGGAAATGGCATGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296102.8
3UTR-3UTR CCA 90 bp GAATTCAGCATCTTCTCCAAAGATAAAATCGGGAGGCAGTTCTGGGTATTGGGCTGTCTCTCCAGCATATaGTATGTGCAGTTTAAATCG +
Preference number: 2 (lower is better)
Translates to: EFSIFSKDKIGRQFWVLGCLSSI*YVQFKS
Trigger: CGATTTAAACTGCACATACCATATGCTGGAGAGACA...GCCCAATACCCAGAACTGCCTCCCGATTTTATCTTTGGAGAAGATGCTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448427.1
3UTR-3UTR GCA 90 bp ATCTTCTCCAAAGATAAAATCGGGAGGCAGTTCTGGGTATTGGGCATTGAAAATCCAGCATATGGTATGTaGAGTTTAAATCGGTCACAG +
Preference number: 2 (lower is better)
Translates to: IFSKDKIGRQFWVLGIENPAYGM*SLNRSQ
Trigger: CTGTGACCGATTTAAACTGCACATACCATATGCTGG...ATTTTCAATGCCCAATACCCAGAACTGCCTCCCGATTTTATCTTTGGAGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
3UTR CCA 72 bp TCTCCAAAGATAAAATCGGGAGGCAGTTCTGGGTATTaGGCATTGAAAATGATATCCCACTTTAATGTCTCT +
Preference number: 3 (lower is better)
Translates to: SPKIKSGGSSGY*ALKMISHFNVS
Trigger: AGAGACATTAAAGTGGGATATCATTTTCAATGCCCAATACCCAGAACTGCCTCCCGATTTTATCTTTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CCA 90 bp TCAGTTATCCTCAAACAGTTTGTAGCATCCAGTCCCACTTTTCCATTCCGGACCCATGGTGACCACACCTaGGCAGTCTCCGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: SVILKQFVASSPTFPFRTHGDHT*AVSVTG
Trigger: GCCGGTGACGGAGACTGCCCAGGTGTGGTCACCATG...GGTCCGGAATGGAAAAGTGGGACTGGATGCTACAAACTGTTTGAGGATAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CCA 90 bp GCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCACATGGTGACCACACCTaGGCAGTCTCCGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: ATGFLNQYPRPQSSLYKSHGDHT*AVSVTG
Trigger: GCCGGTGACGGAGACTGCCCAGGTGTGGTCACCATG...TGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR TCA 90 bp GCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCAACGCTACAGGATTTCTaGATCAGTATCCCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ATGFLNQYPRPQSSLYKSTLQDF*ISIPAL
Trigger: GAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGT...TGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR TCA 90 bp GCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCAGGTTTCTCTTGGTGTTaGAGCAGAAACCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ATGFLNQYPRPQSSLYKSGFSWC*SRNLSQ
Trigger: CTGGGACAGGTTTCTGCTTCAACACCAAGAGAAACC...TGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR TCA 90 bp TCTTTTATTACACGCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCAATCACAGGAGGCAGTaGTTCCATGCCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFITRYRISESVSPPSVFNHRRQ*FHAISS
Trigger: AGAGGAAATGGCATGGAATCACTGCCTCCTGTGATT...GAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGTGTAATAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR CCA 90 bp GAATTCAGCATCTTCTCCAAAGATAAAATCGGGAGGCAGTTCTGGGTATTGGGCGGCAGTTCTGGGTATTaGGCATTGAAAATGATATCC +
Preference number: 4 (lower is better)
Translates to: EFSIFSKDKIGRQFWVLGGSSGY*ALKMIS
Trigger: GGATATCATTTTCAATGCCCAATACCCAGAACTGCC...GCCCAATACCCAGAACTGCCTCCCGATTTTATCTTTGGAGAAGATGCTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR GCA 90 bp GATGTGCAGCCAGATTTTAAGTCAGTTATCCTCAAACAGTTTGTAGCATCCAGTACCACAGCTTTGACTTaGTCTTGGCAAAGAAGACCG +
Preference number: 4 (lower is better)
Translates to: DVQPDFKSVILKQFVASSTTALT*SWQRRP
Trigger: CGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGT...ACTGGATGCTACAAACTGTTTGAGGATAACTGACTTAAAATCTGGCTGCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CCA 90 bp TGGGCATTGAAAATGATATCCCACTTTAATGTCTCTCCAGCATATGGTATGTGCGAAAGGGGAGAGCATTaGAGATATTCGGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: WALKMISHFNVSPAYGMCERGEH*RYSVQG
Trigger: GCCTTGAACCGAATATCTCCAATGCTCTCCCCTTTC...GCACATACCATATGCTGGAGAGACATTAAAGTGGGATATCATTTTCAATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CCA 90 bp TGGGCATTGAAAATGATATCCCACTTTAATGTCTCTCCAGCATATGGTATGTGCGACATTTCACCTCTGTaGTCTTCCAAAAACCATAAC +
Preference number: 4 (lower is better)
Translates to: WALKMISHFNVSPAYGMCDISPL*SSKNHN
Trigger: GTTATGGTTTTTGGAAGACCACAGAGGTGAAATGTC...GCACATACCATATGCTGGAGAGACATTAAAGTGGGATATCATTTTCAATGCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CCA 90 bp TCTGGGTATTGGGCATTGAAAATGATATCCCACTTTAATGTCTCTCCAGCATATTGTCTCTCCAGCATATaGTATGTGCAGTTTAAATCG +
Preference number: 4 (lower is better)
Translates to: SGYWALKMISHFNVSPAYCLSSI*YVQFKS
Trigger: CGATTTAAACTGCACATACCATATGCTGGAGAGACA...ATATGCTGGAGAGACATTAAAGTGGGATATCATTTTCAATGCCCAATACCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CCA 90 bp GCTCTTGGCAAAGAAGACCGCGGAGAGGAACATGGTGACCACACCTaGGCAGTCTCCGTCACCGGCCAAAAGGCCCCCAACCAACAACAA +
Preference number: 5 (lower is better)
Translates to: ALGKEDRGEEHGDHT*AVSVTGQKAPNQQQ
Trigger: TTGTTGTTGGTTGGGGGCCTTTTGGCCGGTGACGGAGACTGCCCAGGTGTGGTCACCATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296102.8
ENST00000379666.7
CDS TCA 90 bp ATACTAAATCTAACTGGGAAGTCAGCCAAGGGTAAAGAAGAGCACTaGCTCGGGAGCCCGAGGACTTCTTTAACTGCCCTGCCGCATTAC +
Preference number: 5 (lower is better)
Translates to: ILNLTGKSAKGKEEH*LGSPRTSLTALPHY
Trigger: GTAATGCGGCAGGGCAGTTAAAGAAGTCCTCGGGCTCCCGAGTCAGTGCTCTTCTTTACCCTTGGCTGACTTCCCAGTTAGATTTAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483992.5
CDS CCA 90 bp GCCCCTCTCGGGAGCGGTTTCCTTATTTTTAGAGTTCGAAATAGGTaGGCTGCAAATTCTGAGGTCCTTCGGACAAAGATTCTCCTAACA +
Preference number: 5 (lower is better)
Translates to: APLGSGFLIFRVRNR*AANSEVLRTKILLT
Trigger: TGTTAGGAGAATCTTTGTCCGAAGGACCTCAGAATTTGCAGCCCACCTATTTCGAACTCTAAAAATAAGGAAACCGCTCCCGAGAGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483992.5
CDS-3UTR CAA 90 bp TCTTTTATTACACGCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCCGGTTTCTCTTGGTGTaGAAGCAGAAACCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: SFITRYRISESVSPPSVFRFLLV*KQKPVP
Trigger: TGGGACAGGTTTCTGCTTCAACACCAAGAGAAACCG...GAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGTGTAATAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR CAA 90 bp CCTCAAACAGTTTGTAGCATCCAGTCCCACTTTTCCATTCCGGACCACGCTAGAAGGCAGTTCTGGGTATaGGGCATTGAAAATGATATC +
Preference number: 5 (lower is better)
Translates to: PQTVCSIQSHFSIPDHARRQFWV*GIENDI
Trigger: GATATCATTTTCAATGCCCAATACCCAGAACTGCCT...TCTAGCGTGGTCCGGAATGGAAAAGTGGGACTGGATGCTACAAACTGTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CAA 90 bp GCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCACGCAGTCGGTTTCTCTaGGTGTTGAAGCAGAAACCT +
Preference number: 5 (lower is better)
Translates to: ATGFLNQYPRPQSSLYKSRSRFL*VLKQKP
Trigger: AGGTTTCTGCTTCAACACCAAGAGAAACCGACTGCG...TGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS CCA 90 bp TATGAAAGGGGAGAGCATTGGAGATATTCGGTTCAAGGCCACTTCTaGGGACATTTTAACTTGACTTGTAAATCACCACTTAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: YERGEHWRYSVQGHF*GHFNLTCKSPLSQV
Trigger: CACCTGGCTAAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCCAGAAGTGGCCTTGAACCGAATATCTCCAATGCTCTCCCCTTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS-3UTR CAA 90 bp TCTTTTATTACACGCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCACCAGAATGTTTTTaGACTTGCTCTTGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: SFITRYRISESVSPPSVFSPECF*TCSWQR
Trigger: TCTTTGCCAAGAGCAAGTCAAAAAACATTCTGGTGA...GAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGTGTAATAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS-3UTR CAA 90 bp GCTACAGGATTTCTGAATCAGTATCCCCGCCCTCAGTCTTCTCTTTATAAATCACACGAAGAGGACTCTTaGTTTCACAACTGGATCATA +
Preference number: 5 (lower is better)
Translates to: ATGFLNQYPRPQSSLYKSHEEDS*FHNWII
Trigger: TATGATCCAGTTGTGAAACAAAGAGTCCTCTTCGTG...TGATTTATAAAGAGAAGACTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296102.8
CDS TCA 72 bp CCACAGCCAGACTCAACGGTCCGTGAGGACGGCAATTaGATCCAGACACCGCAGACCCCTTCTCAGGCACCC +
Preference number: 6 (lower is better)
Translates to: PQPDSTVREDGN*IQTPQTPSQAP
Trigger: GGGTGCCTGAGAAGGGGTCTGCGGTGTCTGGATTCAATTGCCGTCCTCACGGACCGTTGAGTCTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483992.5
CDS CCA 72 bp AAAGAAGACCGCGGAGAGGAACATGGTGACCACACCTaGGCAGTCTCCGTCACCGGCCAAAAGGCCCCCAAC +
Preference number: 6 (lower is better)
Translates to: KEDRGEEHGDHT*AVSVTGQKAPN
Trigger: GTTGGGGGCCTTTTGGCCGGTGACGGAGACTGCCCAGGTGTGGTCACCATGTTCCTCTCCGCGGTCTTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296102.8
ENST00000379666.7
CDS TCA 72 bp GGAGAAAAACGCCCCACAGCCAGACTCAACGGTCCGTaGGGACGGCAATTGAATCCAGACACCGCAGACCCC +
Preference number: 6 (lower is better)
Translates to: GEKRPTARLNGP*GRQLNPDTADP
Trigger: GGGGTCTGCGGTGTCTGGATTCAATTGCCGTCCTCACGGACCGTTGAGTCTGGCTGTGGGGCGTTTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483992.5
CDS TCA 72 bp CTAACTGGGAAGTCAGCCAAGGGTAAAGAAGAGCACTaGCTCGGGAGCCCGAGGACTTCTTTAACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: LTGKSAKGKEEH*LGSPRTSLTAL
Trigger: CAGGGCAGTTAAAGAAGTCCTCGGGCTCCCGAGTCAGTGCTCTTCTTTACCCTTGGCTGACTTCCCAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476552.1
ENST00000483992.5
CDS TCA 72 bp GAGTCAGTTTTTCCCGCAGTCGGTTTCTCTTGGTGTTaGAGCAGAAACCTGTCCCAGCTTCGCTCACCATTC +
Preference number: 6 (lower is better)
Translates to: ESVFPAVGFSWC*SRNLSQLRSPF
Trigger: GAATGGTGAGCGAAGCTGGGACAGGTTTCTGCTTCAACACCAAGAGAAACCGACTGCGGGAAAAACTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296102.8
ENST00000476552.1
CDS CCA 72 bp ATTCCGGACCACGCTAGATATGAAAGGGGAGAGCATTaGAGATATTCGGTTCAAGGCCACTTCTGGGGACAT +
Preference number: 6 (lower is better)
Translates to: IPDHARYERGEH*RYSVQGHFWGH
Trigger: ATGTCCCCAGAAGTGGCCTTGAACCGAATATCTCCAATGCTCTCCCCTTTCATATCTAGCGTGGTCCGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CAA 72 bp AGAGTCAGTTTTTCCCGCAGTCGGTTTCTCTTGGTGTaGAAGCAGAAACCTGTCCCAGCTTCGCTCACCATT +
Preference number: 6 (lower is better)
Translates to: RVSFSRSRFLLV*KQKPVPASLTI
Trigger: AATGGTGAGCGAAGCTGGGACAGGTTTCTGCTTCAACACCAAGAGAAACCGACTGCGGGAAAAACTGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296102.8
ENST00000476552.1
CDS CAA 72 bp CCACGAAGAGGACTCTTTGTTTCATTTGACTTGCTCTaGGCAAAGAAGACCGCGGAGAGGAACATGGTGACC +
Preference number: 6 (lower is better)
Translates to: PRRGLFVSFDLL*AKKTAERNMVT
Trigger: GGTCACCATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAATGAAACAAAGAGTCCTCTTCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379666.7
CDS CAA 72 bp CACCTCTGTGGTCTTCCAAAAACCATAACCACAGCTTaGACTTGCTCTTGGCAAAGAAGACCGCGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: HLCGLPKTITTA*TCSWQRRPRRG
Trigger: TCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGTTATGGTTTTTGGAAGACCACAGAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS GCA 72 bp TGTGGTCTTCCAAAAACCATAACCACAGCTTTGACTTaGTCTTGGCAAAGAAGACCGCGGAGAGGAACATGG +
Preference number: 6 (lower is better)
Translates to: CGLPKTITTALT*SWQRRPRRGTW
Trigger: CCATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGTTATGGTTTTTGGAAGACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CAA 72 bp TCTTCCAAAAACCATAACCACAGCTTTGACTTGCTCTaGGCAAAGAAGACCGCGGAGAGGAACATGGTGACC +
Preference number: 6 (lower is better)
Translates to: SSKNHNHSFDLL*AKKTAERNMVT
Trigger: GGTCACCATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGTTATGGTTTTTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CAA 72 bp CTGTGGTCTTCCAAAAACCATAACCACAGCTTTGACTaGCTCTTGGCAAAGAAGACCGCGGAGAGGAACATG +
Preference number: 6 (lower is better)
Translates to: LWSSKNHNHSFD*LLAKKTAERNM
Trigger: CATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGTTATGGTTTTTGGAAGACCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CAA 90 bp ATTTCACCTCTGTGGTCTTCCAAAAACCATAACCACAGCTTTGACTaGCTCTTGGCAAAGAAGACCGCGGAGAGGAACATGGTGACCACA +
Preference number: 6 (lower is better)
Translates to: ISPLWSSKNHNHSFD*LLAKKTAERNMVTT
Trigger: TGTGGTCACCATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAAGCTGTGGTTATGGTTTTTGGAAGACCACAGAGGTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448427.1
CDS CAA 72 bp TCTTTTCCACGAAGAGGACTCTTTGTTTCATTTGACTaGCTCTTGGCAAAGAAGACCGCGGAGAGGAACATG +
Preference number: 6 (lower is better)
Translates to: SFPRRGLFVSFD*LLAKKTAERNM
Trigger: CATGTTCCTCTCCGCGGTCTTCTTTGCCAAGAGCAAGTCAAATGAAACAAAGAGTCCTCTTCGTGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379666.7
CDS CCA 72 bp GGGAGCGGTTTCCTTATTTTTAGAGTTCGAAATAGGTaGGCTGCAAATTCTGAGGTCCTTCGGACAAAGATT +
Preference number: 6 (lower is better)
Translates to: GSGFLIFRVRNR*AANSEVLRTKI
Trigger: AATCTTTGTCCGAAGGACCTCAGAATTTGCAGCCCACCTATTTCGAACTCTAAAAATAAGGAAACCGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483992.5
CDS CAA 72 bp AAGGTGCAAGTATTCGCGCTGCAGCAAGCTTCTTGTTaGACAAGTTTAACCTTTGCAAATTACAACAACCAT +
Preference number: 6 (lower is better)
Translates to: KVQVFALQQASC*TSLTFANYNNH
Trigger: ATGGTTGTTGTAATTTGCAAAGGTTAAACTTGTCAAACAAGAAGCTTGCTGCAGCGCGAATACTTGCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476552.1
ENST00000483992.5