RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRPL22 (Homo sapiens)

Ensembl gene IDs: ENSG00000082515

Ensembl transcript IDs: ENST00000265229.12, ENST00000439747.7, ENST00000518364.1, ENST00000520040.5, ENST00000522038.5, ENST00000523037.6

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGTACACCACACCCATCATCAATCACCTCCCTCCGTCACTAGGTaGGGATTACAGGTCCCTCCCTGGACACATGGGGATTACAATTTG +
Preference number: 1 (lower is better)
Translates to: GVHHTHHQSPPSVTR*GLQVPPWTHGDYNL
Trigger: CAAATTGTAATCCCCATGTGTCCAGGGAGGGACCTGTAATCCCCACCTAGTGACGGAGGGAGGTGATTGATGATGGGTGTGGTGTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR GCA 90 bp TTACCTCATAACACTGTATTCAAGTCCAGTATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAGTTAACATTCCCTTTCAAAGTTACT +
Preference number: 1 (lower is better)
Translates to: LPHNTVFKSSIKTAT*RTLVGKLTFPFKVT
Trigger: AGTAACTTTGAAAGGGAATGTTAACTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGATACTGGACTTGAATACAGTGTTATGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 90 bp GGCTGTAGACAAAGAGTACTTCTTCTTAATGAAGACGTGTATGAATaGGAGGGAAGCAGTGTTGAACACTCTAATTTGAAACTAACAATT +
Preference number: 1 (lower is better)
Translates to: GCRQRVLLLNEDVYE*EGSSVEHSNLKLTI
Trigger: AATTGTTAGTTTCAAATTAGAGTGTTCAACACTGCTTCCCTCTCATTCATACACGTCTTCATTAAGAAGAAGTACTCTTTGTCTACAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACGGCCTGTGCCAACAGTaGAAGGAAAAACGGTACCAC +
Preference number: 2 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHGLCQQ*KEKRYH
Trigger: GTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGCC...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAAGCATCCCCACCACATaGGAGCACAGTGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGSIPTT*EHSDLV
Trigger: CACCAGGTCACTGTGCTCTCATGTGGTGGGGATGCT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAAGCATCCCCACCACATaGGAGCACAGTGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWESIPTT*EHSDLV
Trigger: CACCAGGTCACTGTGCTCTCATGTGGTGGGGATGCT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATAGCATCCCCACCACATaGGAGCACAGTGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHSIPTT*EHSDLV
Trigger: CACCAGGTCACTGTGCTCTCATGTGGTGGGGATGCT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACCTTCCAAGTCGCAAATaGATACAAATATGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHLPSRK*IQICPE
Trigger: CTCTGGGCATATTTGTATGCATTTGCGACTTGGAAG...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACTGTAATGAAACAACATaGAGCCACTCTAACTTCCCA +
Preference number: 2 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHCNETT*SHSNFP
Trigger: TGGGAAGTTAGAGTGGCTGCATGTTGTTTCATTACA...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAGGCCTGTGCCAACAGTaGAAGGAAAAACGGTACCAC +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEGLCQQ*KEKRYH
Trigger: GTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGCC...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACTTTAGAATGCAATGCTaGGATTGGTTCAATTCCTCT +
Preference number: 2 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHFRMQC*DWFNSS
Trigger: AGAGGAATTGAACCAATCTCAGCATTGCATTCTAAA...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATCTGCTAATAAAAGGTTaGGTGCCACCTACTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYLLIKG*VPPTAP
Trigger: TGGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAG...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATGGAAGCAGTTCCAAATaGAGGCTTAACCTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYGSSSK*RLNLGR
Trigger: CCTTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCC...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSIKTAT*RTLVGK
Trigger: CTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGAT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACATGTCTTTTTACCCATaGATTAGGTTAACTGGAGAG +
Preference number: 2 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHMSFYP*IRLTGE
Trigger: CTCTCCAGTTAACCTAATGCATGGGTAAAAAGACAT...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCTGCTAATAAAAGGTTaGGTGCCACCTACTGCCCCA +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHLLIKG*VPPTAP
Trigger: TGGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTCCAGTGTTATTTCCCTaGCTCCATGCTACAACAGCT +
Preference number: 2 (lower is better)
Translates to: TYPVFFLANENAQTRMKVPVLFP*LHATTA
Trigger: AGCTGTTGTAGCATGGAGTCAGGGAAATAACACTGG...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQIKTAT*RTLVGK
Trigger: CTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGAT...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCACTCTAACTTCCCATaGTCCCAAGAGAAAATTAAG +
Preference number: 2 (lower is better)
Translates to: ACANSERKNGTTEHPKILHSNFP*SQEKIK
Trigger: CTTAATTTTCTCTTGGGACCATGGGAAGTTAGAGTG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTAGTGAATTGAATCATTaGGGTGGGGCCCAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: TYPVFFLANENAQTRMKVSELNH*GGAQKS
Trigger: AGACTTCTGGGCCCCACCCCAATGATTCAATTCACT...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAATCTGTCCTACACCTTaGTTTATTCCACTGACCCCT +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQICPTP*FIPLTP
Trigger: AGGGGTCAGTGGAATAAACCAAGGTGTAGGACAGAT...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATAAACTGCAGGTTCCATaGTCTCCCACACCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYKLQVP*SPTPKL
Trigger: AAGCTTTGGTGTGGGAGACCATGGAACCTGCAGTTT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAGAGAGCACAGTGACCTaGTGTGATAATTCTCCAACA +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQESTVT*CDNSPT
Trigger: TGTTGGAGAATTATCACACCAGGTCACTGTGCTCTC...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACTTGGTTTATTCCACTaGCCCCTGATGTCTTTTTAC +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQLGLFH*PLMSFY
Trigger: GTAAAAAGACATCAGGGGTCAGTGGAATAAACCAAG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCGATTCTTCTTTTGCATaGAAAAGTTGGACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSDSSFA*KSWTRA
Trigger: AGCCCTAGTCCAACTTTTGCATGCAAAAGAAGAATC...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCCTGCAGGACACTAGTTaGAAAGTTAACATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSLQDTS*KVNIPF
Trigger: AAAGGGAATGTTAACTTTCCAACTAGTGTCCTGCAG...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAAAACTGCAGGTTCCATaGTCTCCCACACCAAAGCTT +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEKLQVP*SPTPKL
Trigger: AAGCTTTGGTGTGGGAGACCATGGAACCTGCAGTTT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAGAAGACGTGTATGAATaGGAGGGAAGCAGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEEDVYE*EGSSVE
Trigger: TTCAACACTGCTTCCCTCTCATTCATACACGTCTTC...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGATGCCCCATTTTAGAATaGAATGCTGAGATTGGTTCA +
Preference number: 2 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGCPILE*NAEIGS
Trigger: TGAACCAATCTCAGCATTGCATTCTAAAATGGGGCA...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAGCCCCAATATTTACATaGTGTGTGACTTGTGATAGT +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQAPIFT*CVTCDS
Trigger: ACTATCACAAGTCACACAGCATGTAAATATTGGGGC...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATATCTGTCCTACACCTTaGTTTATTCCACTGACCCCT +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHICPTP*FIPLTP
Trigger: AGGGGTCAGTGGAATAAACCAAGGTGTAGGACAGAT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAATCCAGTCTTCTTTCTaGCTAATGAGAATGCACAGA +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQIQSSF*LMRMHR
Trigger: TCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGAT...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCTTGGTTTATTCCACTaGCCCCTGATGTCTTTTTAC +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHLGLFH*PLMSFY
Trigger: GTAAAAAGACATCAGGGGTCAGTGGAATAAACCAAG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAATGTTTCATAAATGAATaGAATGGAGGCCAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWECFINE*NGGQQG
Trigger: CCCTTGCTGGCCTCCATTTCATTCATTTATGAAACA...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCTTCCAAGTCGCAAATaGATACAAATATGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHLPSRK*IQICPE
Trigger: CTCTGGGCATATTTGTATGCATTTGCGACTTGGAAG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAATTGAGTGCCACCTACTaGCCCATTTTAGAATGCAAT +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWELSATY*PILECN
Trigger: ATTGCATTCTAAAATGGGGCAGTAGGTGGCACTCAA...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATTTGAGTGCCACCTACTaGCCCATTTTAGAATGCAAT +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHLSATY*PILECN
Trigger: ATTGCATTCTAAAATGGGGCAGTAGGTGGCACTCAA...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATGATTCTTCTTTTGCATaGAAAAGTTGGACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYDSSFA*KSWTRA
Trigger: AGCCCTAGTCCAACTTTTGCATGCAAAAGAAGAATC...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTCTGCAGGACACTAGTTaGAAAGTTAACATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: TYPVFFLANENAQTRMKVLQDTS*KVNIPF
Trigger: AAAGGGAATGTTAACTTTCCAACTAGTGTCCTGCAG...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACTTTTTGTAACGTACTaGAAGCAGTTCCAAATGAAG +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQLFVTY*KQFQMK
Trigger: CTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATCTTGTGATAGTTATTTaGATTCTGTGTGCTTCGGTT +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYLVIVI*ILCASV
Trigger: AACCGAAGCACACAGAATTCAAATAACTATCACAAG...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATACCAGATACAGTCAGTaGCACAGGTTAGCTATTATT +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHTRYSQ*HRLAII
Trigger: AATAATAGCTAACCTGTGTCACTGACTGTATCTGGT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATTGCCCCATTTTAGAATaGAATGCTGAGATTGGTTCA +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHCPILE*NAEIGS
Trigger: TGAACCAATCTCAGCATTGCATTCTAAAATGGGGCA...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATGCCCCAATATTTACATaGTGTGTGACTTGTGATAGT +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHAPIFT*CVTCDS
Trigger: ACTATCACAAGTCACACAGCATGTAAATATTGGGGC...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAATATACTCAAAAGGTATaGAGAACCAGCTACTTTAGA +
Preference number: 2 (lower is better)
Translates to: SWMLESTLLATKTSRMSQYTQKV*RTSYFR
Trigger: TCTAAAGTAGCTGGTTCTGCATACCTTTTGAGTATA...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATATGTCTTTTTACCCATaGATTAGGTTAACTGGAGAG +
Preference number: 2 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYMSFYP*IRLTGE
Trigger: CTCTCCAGTTAACCTAATGCATGGGTAAAAAGACAT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCACTCTAACTTCCCATaGTCCCAAGAGAAAATTAAG +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHHSNFP*SQEKIK
Trigger: CTTAATTTTCTCTTGGGACCATGGGAAGTTAGAGTG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAAATGAAGGCTTAACCTaGGAAGGAAATTTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGNEGLT*EGNFLH
Trigger: ATGAAGAAAATTTCCTTCCCAGGTTAAGCCTTCATT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCATAATTTATATTTATaGTGTCCATGGCACCACCTG +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHHNLYL*CPWHHL
Trigger: CAGGTGGTGCCATGGACATCATAAATATAAATTATG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTATACTCAAAAGGTATaGAGAACCAGCTACTTTAGA +
Preference number: 2 (lower is better)
Translates to: TYPVFFLANENAQTRMKVYTQKV*RTSYFR
Trigger: TCTAAAGTAGCTGGTTCTGCATACCTTTTGAGTATA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR GCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAGATAATTCTCCAACATaGAAATCACTGGGGCATTTA +
Preference number: 2 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEDNSPT*KSLGHL
Trigger: TAAATGCCCCAGTGATTTGCATGTTGGAGAATTATC...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATAATGAAGGCTTAACCTaGGAAGGAAATTTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHNEGLT*EGNFLH
Trigger: ATGAAGAAAATTTCCTTCCCAGGTTAAGCCTTCATT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR CCA 72 bp CACACCCATCATCAATCACCTCCCTCCGTCACTAGGTaGGGATTACAGGTCCCTCCCTGGACACATGGGGAT +
Preference number: 3 (lower is better)
Translates to: HTHHQSPPSVTR*GLQVPPWTHGD
Trigger: ATCCCCATGTGTCCAGGGAGGGACCTGTAATCCCCACCTAGTGACGGAGGGAGGTGATTGATGATGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR CCA 72 bp CGTGGAGCATCCCCACCACATGAGAGCACAGTGACCTaGTGTGATAATTCTCCAACATGCAAATCACTGGGG +
Preference number: 3 (lower is better)
Translates to: RGASPPHESTVT*CDNSPTCKSLG
Trigger: CCCCAGTGATTTGCATGTTGGAGAATTATCACACCAGGTCACTGTGCTCTCATGTGGTGGGGATGCTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 72 bp GGGAGGCCTCAGGAAACTTACAATCATGGCAGAGGGTaGAGTAGGCACATTTTACATGGCAGCAGGCAAGAC +
Preference number: 3 (lower is better)
Translates to: GRPQETYNHGRG*SRHILHGSRQD
Trigger: GTCTTGCCTGCTGCCATGTAAAATGTGCCTACTTCACCCTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR CCA 72 bp TCTCATGAGAACCCACTCACTATCACGAGAACAGCATaGGGTACACCACACCCATCATCAATCACCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SHENPLTITRTA*GTPHPSSITSL
Trigger: GAGGGAGGTGATTGATGATGGGTGTGGTGTACCCCATGCTGTTCTCGTGATAGTGAGTGGGTTCTCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAATCTGTCCTACACCTaGGTTTATTCCACTGACCCC +
Preference number: 3 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHNLSYT*VYSTDP
Trigger: GGGGTCAGTGGAATAAACCAAGGTGTAGGACAGATT...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 72 bp TACAGGTCCCTCCCTGGACACATGGGGATTACAATTTaGGATAAGATTGGGTGGGAACACAGAGCCAAACCA +
Preference number: 3 (lower is better)
Translates to: YRSLPGHMGITI*DKIGWEHRAKP
Trigger: TGGTTTGGCTCTGTGTTCCCACCCAATCTTATCTCAAATTGTAATCCCCATGTGTCCAGGGAGGGACCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTCTGCTAATAAAAGGTaGAGTGCCACCTACTGCCCC +
Preference number: 3 (lower is better)
Translates to: TYPVFFLANENAQTRMKVSANKR*SATYCP
Trigger: GGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAGA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATTCTGCTAATAAAAGGTaGAGTGCCACCTACTGCCCC +
Preference number: 3 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYSANKR*SATYCP
Trigger: GGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAGA...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAAATCTGTCCTACACCTaGGTTTATTCCACTGACCCC +
Preference number: 3 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGNLSYT*VYSTDP
Trigger: GGGGTCAGTGGAATAAACCAAGGTGTAGGACAGATT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCAATGCAATGCTGAGATaGGTTCAATTCCTCTCTCAG +
Preference number: 3 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSNAMLR*VQFLSQ
Trigger: CTGAGAGAGGAATTGAACCAATCTCAGCATTGCATT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 72 bp CTGAAGCAGTGCCTTCACTTACATAATTTATATTTATaGTGTCCATGGCACCACCTGGCTTTAGTCACACCC +
Preference number: 3 (lower is better)
Translates to: LKQCLHLHNLYL*CPWHHLALVTP
Trigger: GGGTGTGACTAAAGCCAGGTGGTGCCATGGACATCATAAATATAAATTATGTAAGTGAAGGCACTGCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 72 bp AGGCACATTTTACATGGCAGCAGGCAAGACAGCGAGTaGAGAGGGAACTTTCAAACACTTATAAAACCATCA +
Preference number: 3 (lower is better)
Translates to: RHILHGSRQDSE*RGNFQTLIKPS
Trigger: TGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCTTGCCTGCTGCCATGTAAAATGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR CCA 72 bp AAATCACTGGGGCATTTATTAAAACTGCAGGTTCCATaGTCTCCCACACCAAAGCTTCTGATTCACTTAGTC +
Preference number: 3 (lower is better)
Translates to: KSLGHLLKLQVP*SPTPKLLIHLV
Trigger: GACTAAGTGAATCAGAAGCTTTGGTGTGGGAGACCATGGAACCTGCAGTTTTAATAAATGCCCCAGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR GCA 72 bp AACACTGTATTCAAGTCCAGTATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAGTTAACATTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: NTVFKSSIKTAT*RTLVGKLTFPF
Trigger: GAAAGGGAATGTTAACTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGATACTGGACTTGAATACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATAATGCAATGCTGAGATaGGTTCAATTCCTCTCTCAG +
Preference number: 3 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYNAMLR*VQFLSQ
Trigger: CTGAGAGAGGAATTGAACCAATCTCAGCATTGCATT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR-3UTR CAA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAACTTGTGATAGTTATTaGAATTCTGTGTGCTTCGGT +
Preference number: 3 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGTCDSY*NSVCFG
Trigger: ACCGAAGCACACAGAATTCAAATAACTATCACAAGT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR GCA 72 bp AGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATaGAGAACCAGCTACTTTAGAAACCTTTCAATCATA +
Preference number: 3 (lower is better)
Translates to: RDTKTQLYTQKV*RTSYFRNLSII
Trigger: TATGATTGAAAGGTTTCTAAAGTAGCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR GCA 72 bp TTTATAAAGAAAAGACATTTAATTGTGTCAAAGTTCTaGATGGCTGGGGAGGCCTCAGGAAACTTACAATCA +
Preference number: 3 (lower is better)
Translates to: FIKKRHLIVSKF*MAGEASGNLQS
Trigger: TGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCAGAACTTTGACACAATTAAATGTCTTTTCTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
3UTR TCA 72 bp CAAAGAGTACTTCTTCTTAATGAAGACGTGTATGAATaGGAGGGAAGCAGTGTTGAACACTCTAATTTGAAA +
Preference number: 3 (lower is better)
Translates to: QRVLLLNEDVYE*EGSSVEHSNLK
Trigger: TTTCAAATTAGAGTGTTCAACACTGCTTCCCTCTCATTCATACACGTCTTCATTAAGAAGAAGTACTCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACGGCAACTGCCGTCTTTaGTGGCTCAGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHGNCRL*WLRWRW
Trigger: CCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCC...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCTTTGGTGGCTCAGGTaGAGGTGGGGGCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILLWWLR*RWGPFH
Trigger: GTGGAAGGGCCCCCACCTCCACCTGAGCCACCAAAG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACTTTGGCATGGGCAACTaGCGTCTTTGGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHFGMGN*RLWWLR
Trigger: CCTGAGCCACCAAAGACGGCAGTTGCCCATGCCAAA...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGTGCCATGGTAGCGGATaGGTTTCAGGCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILCHGSG*VSGTGL
Trigger: GAGGCCAGTGCCTGAAACGCATCCGCTACCATGGCA...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACCTGCTAATAAAAGGTTaGGTGCCACCTACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHLLIKG*VPPTAP
Trigger: TGGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAG...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGACAACTGTCCCAGTACTaGCGCCGCCATCTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGQLSQY*RRHLSP
Trigger: GGGCGAAAGATGGCGGCGGCAGTACTGGGACAGTTG...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACAACTGTCCCAGTACTaGCGCCGCCATCTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQQLSQY*RRHLSP
Trigger: GGGCGAAAGATGGCGGCGGCAGTACTGGGACAGTTG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCTGCCATGGTAGCGGATaGGTTTCAGGCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSCHGSG*VSGTGL
Trigger: GAGGCCAGTGCCTGAAACGCATCCGCTACCATGGCA...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACGAACGATGGTCCGGCTaGGAAGCTGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHERWSG*EAAEYT
Trigger: AGTATATTCAGCAGCTTCGCAGCCGGACCATCGTTC...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTCTTTGGTGGCTCAGGTaGAGGTGGGGGCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVLWWLR*RWGPFH
Trigger: GTGGAAGGGCCCCCACCTCCACCTGAGCCACCAAAG...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAGGCAACTGCCGTCTTTaGTGGCTCAGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGGNCRL*WLRWRW
Trigger: CCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCC...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACCCTCCGTCACTAGGTaGGGATTACAGGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQPSVTR*GLQVPP
Trigger: GGGAGGGACCTGTAATCCCCACCTAGTGACGGAGGG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCGGCTGCGAAGCTGCTaGATATACTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILRLRSC*IYSLAW
Trigger: CCATGCCAAAGAGTATATTCAGCAGCTTCGCAGCCG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACCACATGAGAGCACAGTaGCCTGGTGTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHHMRAQ*PGVIIL
Trigger: GAGAATTATCACACCAGGTCACTGTGCTCTCATGTG...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCTCCCAAAGCGACCTCTaGCATGGTAGCGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSSQSDL*HGSGCV
Trigger: AACGCATCCGCTACCATGGCAGAGGTCGCTTTGGGA...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATCCCTCCGTCACTAGGTaGGGATTACAGGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYPSVTR*GLQVPP
Trigger: GGGAGGGACCTGTAATCCCCACCTAGTGACGGAGGG...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACCTCATCATAGAGTGTaGACGATGGTCCGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQPHHRV*TMVRLR
Trigger: TCGCAGCCGGACCATCGTTCACACTCTATGATGAGG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAACAACTGTCCCAGTACTaGCGCCGCCATCTTTCGCCC +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEQLSQY*RRHLSP
Trigger: GGGCGAAAGATGGCGGCGGCAGTACTGGGACAGTTG...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATTGCCATGGTAGCGGATaGGTTTCAGGCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYCHGSG*VSGTGL
Trigger: GAGGCCAGTGCCTGAAACGCATCCGCTACCATGGCA...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGATTGTGTCAAAGTTCTaGATGGCTGGGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILIVSKF*MAGEAS
Trigger: TGAGGCCTCCCCAGCCATGCAGAACTTTGACACAAT...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATGGCAACTGCCGTCTTTaGTGGCTCAGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHGNCRL*WLRWRW
Trigger: CCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCC...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACATATACTCTTTGGCATaGGCAACTGCCGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHIYSLA*ATAVFG
Trigger: ACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATAT...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCATAGAGTGTGAACGATaGTCCGGCTGCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSIECER*SGCEAA
Trigger: AGCAGCTTCGCAGCCGGACCATCGTTCACACTCTAT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCCCTCCGTCACTAGGTaGGGATTACAGGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHPSVTR*GLQVPP
Trigger: GGGAGGGACCTGTAATCCCCACCTAGTGACGGAGGG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGAATAAACCTTCTCCATaGTCCCAAAGCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILNKPSP*SQSDLC
Trigger: GCAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATT...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACGGCTGCGAAGCTGCTaGATATACTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQRLRSC*IYSLAW
Trigger: CCATGCCAAAGAGTATATTCAGCAGCTTCGCAGCCG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTCCTCATCATAGAGTGTaGACGATGGTCCGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVPHHRV*TMVRLR
Trigger: TCGCAGCCGGACCATCGTTCACACTCTATGATGAGG...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAGGCCTGTGCCAACAGTaGAAGGAAAAACGGTACCAC +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQGLCQQ*KEKRYH
Trigger: GTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGCC...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCGGAAGCAGTTCCAAATaGAGGCTTAACCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSGSSSK*RLNLGR
Trigger: CCTTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCC...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTTTGGCATGGGCAACTaGCGTCTTTGGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVFGMGN*RLWWLR
Trigger: CCTGAGCCACCAAAGACGGCAGTTGCCCATGCCAAA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCGAACGATGGTCCGGCTaGGAAGCTGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSERWSG*EAAEYT
Trigger: AGTATATTCAGCAGCTTCGCAGCCGGACCATCGTTC...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACTTGAGTGCCACCTACTaGCCCATTTTAGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHLSATY*PILECN
Trigger: ATTGCATTCTAAAATGGGGCAGTAGGTGGCACTCAA...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGGCTGAATATACTCTTTaGCATGGGCAACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILAEYTL*HGQLPS
Trigger: AGACGGCAGTTGCCCATGCCAAAGAGTATATTCAGC...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGAGTGAATTGAATCATTaGGGTGGGGCCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILSELNH*GGAQKS
Trigger: AGACTTCTGGGCCCCACCCCAATGATTCAATTCACT...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCATCACGAGAACAGCATaGGGTACACCACACCCATCA +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSITRTA*GTPHPS
Trigger: TGATGGGTGTGGTGTACCCCATGCTGTTCTCGTGAT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCCCAGTGTTATTTCCCTaGCTCCATGCTACAACAGCT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSPVLFP*LHATTA
Trigger: AGCTGTTGTAGCATGGAGTCAGGGAAATAACACTGG...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAGGAAGCAGTTCCAAATaGAGGCTTAACCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGGSSSK*RLNLGR
Trigger: CCTTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCC...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACACCAGATACAGTCAGTaGCACAGGTTAGCTATTATT +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHTRYSQ*HRLAII
Trigger: AATAATAGCTAACCTGTGTCACTGACTGTATCTGGT...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATTCCCAAAGCGACCTCTaGCATGGTAGCGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHSQSDL*HGSGCV
Trigger: AACGCATCCGCTACCATGGCAGAGGTCGCTTTGGGA...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACGATTCTTCTTTTGCATaGAAAAGTTGGACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHDSSFA*KSWTRA
Trigger: AGCCCTAGTCCAACTTTTGCATGCAAAAGAAGAATC...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAATTGTGTCAAAGTTCTaGATGGCTGGGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGIVSKF*MAGEAS
Trigger: TGAGGCCTCCCCAGCCATGCAGAACTTTGACACAAT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAACAGTGGTAGATTTCTaGTGGTCTCCGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGTVVDF*WSPRFS
Trigger: GGAGAACCTCGGAGACCAGCAGAAATCTACCACTGT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATATAGAGTGTGAACGATaGTCCGGCTGCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYIECER*SGCEAA
Trigger: AGCAGCTTCGCAGCCGGACCATCGTTCACACTCTAT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCAGTGAATTGAATCATTaGGGTGGGGCCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSSELNH*GGAQKS
Trigger: AGACTTCTGGGCCCCACCCCAATGATTCAATTCACT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGATCTGTCCTACACCTTaGTTTATTCCACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILICPTP*FIPLTP
Trigger: AGGGGTCAGTGGAATAAACCAAGGTGTAGGACAGAT...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCGGCTGCGAAGCTGCTaGATATACTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHRLRSC*IYSLAW
Trigger: CCATGCCAAAGAGTATATTCAGCAGCTTCGCAGCCG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATGGCCTGTGCCAACAGTaGAAGGAAAAACGGTACCAC +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHGLCQQ*KEKRYH
Trigger: GTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGCC...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTCTGCTAATAAAAGGTTaGGTGCCACCTACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVLLIKG*VPPTAP
Trigger: TGGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAG...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCTTGGTTTATTCCACTaGCCCCTGATGTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILLGLFH*PLMSFY
Trigger: GTAAAAAGACATCAGGGGTCAGTGGAATAAACCAAG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACCAGTGTTATTTCCCTaGCTCCATGCTACAACAGCT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQPVLFP*LHATTA
Trigger: AGCTGTTGTAGCATGGAGTCAGGGAAATAACACTGG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACACATGAGAGCACAGTaGCCTGGTGTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQHMRAQ*PGVIIL
Trigger: GAGAATTATCACACCAGGTCACTGTGCTCTCATGTG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGTTGAGTGCCACCTACTaGCCCATTTTAGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILLSATY*PILECN
Trigger: ATTGCATTCTAAAATGGGGCAGTAGGTGGCACTCAA...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAGCTGAATATACTCTTTaGCATGGGCAACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGAEYTL*HGQLPS
Trigger: AGACGGCAGTTGCCCATGCCAAAGAGTATATTCAGC...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAAAACTGCAGGTTCCATaGTCTCCCACACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQKLQVP*SPTPKL
Trigger: AAGCTTTGGTGTGGGAGACCATGGAACCTGCAGTTT...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCGAGAGCACAGTGACCTaGTGTGATAATTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSESTVT*CDNSPT
Trigger: TGTTGGAGAATTATCACACCAGGTCACTGTGCTCTC...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GGCCAGCAAGGGAAGAGACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACCTTTTTGTAACGTACTaGAAGCAGTTCCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: GQQGKRPIQSSFWLMRMHLFVTY*KQFQMK
Trigger: CTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAG...GTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGTCTCTTCCCTTGCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATAATAAACCTTCTCCATaGTCCCAAAGCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYNKPSP*SQSDLC
Trigger: GCAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTAATAAACCTTCTCCATaGTCCCAAAGCGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVNKPSP*SQSDLC
Trigger: GCAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATT...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAACCTCATCATAGAGTGTaGACGATGGTCCGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQPHHRV*TMVRLR
Trigger: TCGCAGCCGGACCATCGTTCACACTCTATGATGAGG...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAGGAAGCAGTTCCAAATaGAGGCTTAACCTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEGSSSK*RLNLGR
Trigger: CCTTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCC...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGACCAGATACAGTCAGTaGCACAGGTTAGCTATTATT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILTRYSQ*HRLAII
Trigger: AATAATAGCTAACCTGTGTCACTGACTGTATCTGGT...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAATCCCAAAGCGACCTCTaGCATGGTAGCGGATGCGTT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQSQSDL*HGSGCV
Trigger: AACGCATCCGCTACCATGGCAGAGGTCGCTTTGGGA...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCCTTCCAAGTCGCAAATaGATACAAATATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSLPSRK*IQICPE
Trigger: CTCTGGGCATATTTGTATGCATTTGCGACTTGGAAG...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGTGTAATGAAACAACATaGAGCCACTCTAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILCNETT*SHSNFP
Trigger: TGGGAAGTTAGAGTGGCTGCATGTTGTTTCATTACA...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAGGCCTCGTCCTGAGGTaGACTCAGCTATATATAAAT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQGLVLR*TQLYIN
Trigger: ATTTATATATAGCTGAGTCCACCTCAGGACGAGGCC...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAATATACTCTTTGGCATaGGCAACTGCCGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGIYSLA*ATAVFG
Trigger: ACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATAT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAATATACTCTTTGGCATaGGCAACTGCCGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQIYSLA*ATAVFG
Trigger: ACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATAT...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAATCACGAGAACAGCATaGGGTACACCACACCCATCA +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEITRTA*GTPHPS
Trigger: TGATGGGTGTGGTGTACCCCATGCTGTTCTCGTGAT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAGGCCTGTGCCAACAGTaGAAGGAAAAACGGTACCAC +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQGLCQQ*KEKRYH
Trigger: GTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGCC...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTGAAGACGTGTATGAATaGGAGGGAAGCAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVEDVYE*EGSSVE
Trigger: TTCAACACTGCTTCCCTCTCATTCATACACGTCTTC...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCTTGTGATAGTTATTTaGATTCTGTGTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILLVIVI*ILCASV
Trigger: AACCGAAGCACACAGAATTCAAATAACTATCACAAG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCCAGTGTTATTTCCCTaGCTCCATGCTACAACAGCT +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHPVLFP*LHATTA
Trigger: AGCTGTTGTAGCATGGAGTCAGGGAAATAACACTGG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGCATAATTTATATTTATaGTGTCCATGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILHNLYL*CPWHHL
Trigger: CAGGTGGTGCCATGGACATCATAAATATAAATTATG...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYIKTAT*RTLVGK
Trigger: CTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGAT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCTGTAATGAAACAACATaGAGCCACTCTAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSCNETT*SHSNFP
Trigger: TGGGAAGTTAGAGTGGCTGCATGTTGTTTCATTACA...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCTGTGCCAACAGTGAAAGGAAAAACGGTACCACTGAACACCCTAAAATACTGGATAATTCTCCAACATaGAAATCACTGGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: ACANSERKNGTTEHPKILDNSPT*KSLGHL
Trigger: TAAATGCCCCAGTGATTTGCATGTTGGAGAATTATC...CAGTATTTTAGGGTGTTCAGTGGTACCGTTTTTCCTTTCACTGTTGGCACAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTGGCCTCGTCCTGAGGTaGACTCAGCTATATATAAAT +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVGLVLR*TQLYIN
Trigger: ATTTATATATAGCTGAGTCCACCTCAGGACGAGGCC...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATGGCCTCGTCCTGAGGTaGACTCAGCTATATATAAAT +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYGLVLR*TQLYIN
Trigger: ATTTATATATAGCTGAGTCCACCTCAGGACGAGGCC...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAATAGAGTGTGAACGATaGTCCGGCTGCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQIECER*SGCEAA
Trigger: AGCAGCTTCGCAGCCGGACCATCGTTCACACTCTAT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATAGTGAATTGAATCATTaGGGTGGGGCCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHSELNH*GGAQKS
Trigger: AGACTTCTGGGCCCCACCCCAATGATTCAATTCACT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATAAACTGCAGGTTCCATaGTCTCCCACACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHKLQVP*SPTPKL
Trigger: AAGCTTTGGTGTGGGAGACCATGGAACCTGCAGTTT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATGAAGACGTGTATGAATaGGAGGGAAGCAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHEDVYE*EGSSVE
Trigger: TTCAACACTGCTTCCCTCTCATTCATACACGTCTTC...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCCTTGTGATAGTTATTTaGATTCTGTGTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSLVIVI*ILCASV
Trigger: AACCGAAGCACACAGAATTCAAATAACTATCACAAG...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCCATAATTTATATTTATaGTGTCCATGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSHNLYL*CPWHHL
Trigger: CAGGTGGTGCCATGGACATCATAAATATAAATTATG...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAGCCAAACCATATCACTaGACATGCAAAGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGAKPYH*TCKVKL
Trigger: AAGTTTCACTTTGCATGTTCAGTGATATGGTTTGGC...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAAACCATCAGATCTCATaGGAACCCACTCACTATCAC +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWENHQIS*EPTHYH
Trigger: GTGATAGTGAGTGGGTTCTCATGAGATCTGATGGTT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAATGTAATGAAACAACATaGAGCCACTCTAACTTCCCA +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQCNETT*SHSNFP
Trigger: TGGGAAGTTAGAGTGGCTGCATGTTGTTTCATTACA...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTTGAGTGCCACCTACTaGCCCATTTTAGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVLSATY*PILECN
Trigger: ATTGCATTCTAAAATGGGGCAGTAGGTGGCACTCAA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAAGATTCTTCTTTTGCATaGAAAAGTTGGACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQDSSFA*KSWTRA
Trigger: AGCCCTAGTCCAACTTTTGCATGCAAAAGAAGAATC...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAGCCCCAATATTTACATaGTGTGTGACTTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGAPIFT*CVTCDS
Trigger: ACTATCACAAGTCACACAGCATGTAAATATTGGGGC...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCATGTCTTTTTACCCATaGATTAGGTTAACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSMSFYP*IRLTGE
Trigger: CTCTCCAGTTAACCTAATGCATGGGTAAAAAGACAT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATATTGTGTCAAAGTTCTaGATGGCTGGGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHIVSKF*MAGEAS
Trigger: TGAGGCCTCCCCAGCCATGCAGAACTTTGACACAAT...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGAATCCAGTCTTCTTTCTaGCTAATGAGAATGCACAGA +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGIQSSF*LMRMHR
Trigger: TCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGAT...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAATCACGAGAACAGCATaGGGTACACCACACCCATCA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQITRTA*GTPHPS
Trigger: TGATGGGTGTGGTGTACCCCATGCTGTTCTCGTGAT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATTCATTGAATTCCAACTaGGCCAAAGCCTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHSLNSN*AKAWSI
Trigger: TATTGACCAGGCTTTGGCTCAGTTGGAATTCAATGA...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGATATATAAATTGGACCTaGATTCCACGTTATGGTCTC +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGYINWT*IPRYGL
Trigger: GAGACCATAACGTGGAATTCAGGTCCAATTTATATA...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGATTTAGAATGCAATGCTaGGATTGGTTCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGFRMQC*DWFNSS
Trigger: AGAGGAATTGAACCAATCTCAGCATTGCATTCTAAA...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACTTGTGATAGTTATTTaGATTCTGTGTGCTTCGGTT +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQLVIVI*ILCASV
Trigger: AACCGAAGCACACAGAATTCAAATAACTATCACAAG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAACTTGGTTTATTCCACTaGCCCCTGATGTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWELGLFH*PLMSFY
Trigger: GTAAAAAGACATCAGGGGTCAGTGGAATAAACCAAG...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATCACATGAGAGCACAGTaGCCTGGTGTGATAATTCTC +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHHMRAQ*PGVIIL
Trigger: GAGAATTATCACACCAGGTCACTGTGCTCTCATGTG...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAACATAATTTATATTTATaGTGTCCATGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQHNLYL*CPWHHL
Trigger: CAGGTGGTGCCATGGACATCATAAATATAAATTATG...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAATCCTCGTATCAATTTTaGCAAATACCACATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SWMLESTLLATKTSRMSQSSYQF*QIPHLV
Trigger: GACAAGATGTGGTATTTGGCAAAATTGATACGAGGA...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTGCCCCATTTTAGAATaGAATGCTGAGATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVCPILE*NAEIGS
Trigger: TGAACCAATCTCAGCATTGCATTCTAAAATGGGGCA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATTGCCCCATTTTAGAATaGAATGCTGAGATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYCPILE*NAEIGS
Trigger: TGAACCAATCTCAGCATTGCATTCTAAAATGGGGCA...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATCTGCAGGACACTAGTTaGAAAGTTAACATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYLQDTS*KVNIPF
Trigger: AAAGGGAATGTTAACTTTCCAACTAGTGTCCTGCAG...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATCACTCTAACTTCCCATaGTCCCAAGAGAAAATTAAG +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYHSNFP*SQEKIK
Trigger: CTTAATTTTCTCTTGGGACCATGGGAAGTTAGAGTG...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTATCCAGTCTTCTTTCTaGCTAATGAGAATGCACAGA +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVIQSSF*LMRMHR
Trigger: TCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGAT...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTTATATAAATTGGACCTaGATTCCACGTTATGGTCTC +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVYINWT*IPRYGL
Trigger: GAGACCATAACGTGGAATTCAGGTCCAATTTATATA...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAACCAGATACAGTCAGTaGCACAGGTTAGCTATTATT +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWETRYSQ*HRLAII
Trigger: AATAATAGCTAACCTGTGTCACTGACTGTATCTGGT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAGCCAAACCATATCACTaGACATGCAAAGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEAKPYH*TCKVKL
Trigger: AAGTTTCACTTTGCATGTTCAGTGATATGGTTTGGC...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAAACCATCAGATCTCATaGGAACCCACTCACTATCAC +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQNHQIS*EPTHYH
Trigger: GTGATAGTGAGTGGGTTCTCATGAGATCTGATGGTT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATGTGTGGATATATGATTaGGGTAAAACACCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHVWIYD*GKTPKA
Trigger: GGCCTTGGGTGTTTTACCTCAATCATATATCCACAC...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523037.6
CDS-3UTR GCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATATCAAAACAGCCACCTaGAGGACACTAGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHIKTAT*RTLVGK
Trigger: CTTTCCAACTAGTGTCCTGCAGGTGGCTGTTTTGAT...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTATGTCTTTTTACCCATaGATTAGGTTAACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVMSFYP*IRLTGE
Trigger: CTCTCCAGTTAACCTAATGCATGGGTAAAAAGACAT...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAATCTGTCCTACACCTTaGTTTATTCCACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQICPTP*FIPLTP
Trigger: AGGGGTCAGTGGAATAAACCAAGGTGTAGGACAGAT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATATCTGTCCTACACCTTaGTTTATTCCACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHICPTP*FIPLTP
Trigger: AGGGGTCAGTGGAATAAACCAAGGTGTAGGACAGAT...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAGAGAGCACAGTGACCTaGTGTGATAATTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQESTVT*CDNSPT
Trigger: TGTTGGAGAATTATCACACCAGGTCACTGTGCTCTC...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATTCATTGAATTCCAACTaGGCCAAAGCCTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHSLNSN*AKAWSI
Trigger: TATTGACCAGGCTTTGGCTCAGTTGGAATTCAATGA...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAATCATTGAATTCCAACTaGGCCAAAGCCTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQSLNSN*AKAWSI
Trigger: TATTGACCAGGCTTTGGCTCAGTTGGAATTCAATGA...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAATTTAGAATGCAATGCTaGGATTGGTTCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEFRMQC*DWFNSS
Trigger: AGAGGAATTGAACCAATCTCAGCATTGCATTCTAAA...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATTTTAGAATGCAATGCTaGGATTGGTTCAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHFRMQC*DWFNSS
Trigger: AGAGGAATTGAACCAATCTCAGCATTGCATTCTAAA...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATCTTGGTTTATTCCACTaGCCCCTGATGTCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHLGLFH*PLMSFY
Trigger: GTAAAAAGACATCAGGGGTCAGTGGAATAAACCAAG...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAATGTTTCATAAATGAATaGAATGGAGGCCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQCFINE*NGGQQG
Trigger: CCCTTGCTGGCCTCCATTTCATTCATTTATGAAACA...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATTGTTTCATAAATGAATaGAATGGAGGCCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHCFINE*NGGQQG
Trigger: CCCTTGCTGGCCTCCATTTCATTCATTTATGAAACA...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAATCCTCGTATCAATTTTaGCAAATACCACATCTTGTC +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWESSYQF*QIPHLV
Trigger: GACAAGATGTGGTATTTGGCAAAATTGATACGAGGA...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATGATAATTCTCCAACATaGAAATCACTGGGGCATTTA +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHDNSPT*KSLGHL
Trigger: TAAATGCCCCAGTGATTTGCATGTTGGAGAATTATC...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATAAAATATATACACTGTaGAGTCTGAATCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYKIYTL*SLNLLI
Trigger: GATGAGGAGATTCAGACTCCACAGTGTATATATTTT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTAATGAAGGCTTAACCTaGGAAGGAAATTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TYPVFFLANENAQTRMKVNEGLT*EGNFLH
Trigger: ATGAAGAAAATTTCCTTCCCAGGTTAAGCCTTCATT...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATCTTTTTGTAACGTACTaGAAGCAGTTCCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHLFVTY*KQFQMK
Trigger: CTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAG...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR TCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAGCCAAACCATATCACTaGACATGCAAAGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQAKPYH*TCKVKL
Trigger: AAGTTTCACTTTGCATGTTCAGTGATATGGTTTGGC...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAATGCCCCATTTTAGAATaGAATGCTGAGATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQCPILE*NAEIGS
Trigger: TGAACCAATCTCAGCATTGCATTCTAAAATGGGGCA...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAGATTCTTCTTTTGCATaGAAAAGTTGGACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQDSSFA*KSWTRA
Trigger: AGCCCTAGTCCAACTTTTGCATGCAAAAGAAGAATC...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAGCCCCAATATTTACATaGTGTGTGACTTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQAPIFT*CVTCDS
Trigger: ACTATCACAAGTCACACAGCATGTAAATATTGGGGC...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR GCA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAATATACTCAAAAGGTATaGAGAACCAGCTACTTTAGA +
Preference number: 4 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWEYTQKV*RTSYFR
Trigger: TCTAAAGTAGCTGGTTCTGCATACCTTTTGAGTATA...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp AGACAGCGAGTGAAGAGGGAACTTTCAAACACTTATAAAACCATCAGATCTCATAAAATATATACACTGTaGAGTCTGAATCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RQRVKRELSNTYKTIRSHKIYTL*SLNLLI
Trigger: GATGAGGAGATTCAGACTCCACAGTGTATATATTTT...ATGAGATCTGATGGTTTTATAAGTGTTTGAAAGTTCCCTCTTCACTCGCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAATCCAGTCTTCTTTCTaGCTAATGAGAATGCACAGA +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQIQSSF*LMRMHR
Trigger: TCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGAT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAAAAATATATACACTGTaGAGTCTGAATCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQKIYTL*SLNLLI
Trigger: GATGAGGAGATTCAGACTCCACAGTGTATATATTTT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CCA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAAATGAAGGCTTAACCTaGGAAGGAAATTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQNEGLT*EGNFLH
Trigger: ATGAAGAAAATTTCCTTCCCAGGTTAAGCCTTCATT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp ACCTATCCAGTCTTCTTTCTGGCTAATGAGAATGCACAGACTAGAATGAAGGTTGGGCAACTGCCGTCTTaGGTGGCTCAGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TYPVFFLANENAQTRMKVGQLPS*VAQVEV
Trigger: CACCTCCACCTGAGCCACCAAAGACGGCAGTTGCCC...AACCTTCATTCTAGTCTGTGCATTCTCATTAGCCAGAAAGAAGACTGGATAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATGGGCAACTGCCGTCTTaGGTGGCTCAGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHGQLPS*VAQVEV
Trigger: CACCTCCACCTGAGCCACCAAAGACGGCAGTTGCCC...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp GCCACGAAAACTAGCCGGATGTCACAATGGGAAAGATTCATTGAGATAATGTATAATCTGTCCTACACCTaGGTTTATTCCACTGACCCC +
Preference number: 5 (lower is better)
Translates to: ATKTSRMSQWERFIEIMYNLSYT*VYSTDP
Trigger: GGGGTCAGTGGAATAAACCAAGGTGTAGGACAGATT...ATACATTATCTCAATGAATCTTTCCCATTGTGACATCCGGCTAGTTTTCGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAAATCTGTCCTACACCTaGGTTTATTCCACTGACCCC +
Preference number: 5 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWENLSYT*VYSTDP
Trigger: GGGGTCAGTGGAATAAACCAAGGTGTAGGACAGATT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATTCTGCTAATAAAAGGTaGAGTGCCACCTACTGCCCC +
Preference number: 5 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHSANKR*SATYCP
Trigger: GGGGCAGTAGGTGGCACTCAACCTTTTATTAGCAGA...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp AACTGGAGAGACACAAAAACCCAGCTGTATACTCAAAAGGTATGCAGAACCAGCACTTGTGATAGTTATTaGAATTCTGTGTGCTTCGGT +
Preference number: 5 (lower is better)
Translates to: NWRDTKTQLYTQKVCRTSTCDSY*NSVCFG
Trigger: ACCGAAGCACACAGAATTCAAATAACTATCACAAGT...GCTGGTTCTGCATACCTTTTGAGTATACAGCTGGGTTTTTGTGTCTCTCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TCATGGATGTTAGAAAGTACACTCTTAGCCACGAAAACTAGCCGGATGTCACAATGTCAAGAGAAGCACTaGTGTGGATATATGATTGAG +
Preference number: 5 (lower is better)
Translates to: SWMLESTLLATKTSRMSQCQEKH*CGYMIE
Trigger: CTCAATCATATATCCACACAAGTGCTTCTCTTGACA...TTGTGACATCCGGCTAGTTTTCGTGGCTAAGAGTGTACTTTCTAACATCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp ATATCACTGAACATGCAAAGTGAAACTTCAGGTGGGGACCACAATGTTCATGGATGTCAAGAGAAGCACTaGTGTGGATATATGATTGAG +
Preference number: 5 (lower is better)
Translates to: ISLNMQSETSGGDHNVHGCQEKH*CGYMIE
Trigger: CTCAATCATATATCCACACAAGTGCTTCTCTTGACA...TCCATGAACATTGTGGTCCCCACCTGAAGTTTCACTTTGCATGTTCAGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAAATCTGTCCTACACCTaGGTTTATTCCACTGACCCC +
Preference number: 5 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQNLSYT*VYSTDP
Trigger: GGGGTCAGTGGAATAAACCAAGGTGTAGGACAGATT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TACAAATATGCCCAGAGGCTCAAAAGAAATGGGCAAAGCCTTATAAATATTCATAATGCAATGCTGAGATaGGTTCAATTCCTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: YKYAQRLKRNGQSLINIHNAMLR*VQFLSQ
Trigger: CTGAGAGAGGAATTGAACCAATCTCAGCATTGCATT...ATGAATATTTATAAGGCTTTGCCCATTTCTTTTGAGCCTCTGGGCATATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp ATTACTTTTTGTAACGTACTGGAAGCAGTTCCAAATGAAGGCTTAACCTGGGAAACTTGTGATAGTTATTaGAATTCTGTGTGCTTCGGT +
Preference number: 5 (lower is better)
Translates to: ITFCNVLEAVPNEGLTWETCDSY*NSVCFG
Trigger: ACCGAAGCACACAGAATTCAAATAACTATCACAAGT...TTCCCAGGTTAAGCCTTCATTTGGAACTGCTTCCAGTACGTTACAAAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS-3UTR CAA 90 bp TTGAAATATAGTCTGTTACTATGTTTAAAGCTGATTTCCCCTTCCAAGTCGCAAACTTGTGATAGTTATTaGAATTCTGTGTGCTTCGGT +
Preference number: 5 (lower is better)
Translates to: LKYSLLLCLKLISPSKSQTCDSY*NSVCFG
Trigger: ACCGAAGCACACAGAATTCAAATAACTATCACAAGT...TTGCGACTTGGAAGGGGAAATCAGCTTTAAACATAGTAACAGACTATATTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265229.12
ENST00000522038.5
ENST00000523037.6
CDS TCA 72 bp CGAAAATCCCTTGAGCTCAGGAAGTTAAAGCTGCAGTaGGCTGTGATCATGCCACTATACTCCAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: RKSLELRKLKLQ*AVIMPLYSSPG
Trigger: CCCAGGGCTGGAGTATAGTGGCATGATCACAGCTCACTGCAGCTTTAACTTCCTGAGCTCAAGGGATTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518364.1
CDS CCA 72 bp TGGAGTCTGAATCTCCTCATCATAGAGTGTGAACGATaGTCCGGCTGCGAAGCTGCTGAATATACTCTTTGG +
Preference number: 6 (lower is better)
Translates to: WSLNLLIIECER*SGCEAAEYTLW
Trigger: CCAAAGAGTATATTCAGCAGCTTCGCAGCCGGACCATCGTTCACACTCTATGATGAGGAGATTCAGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265229.12
ENST00000439747.7
ENST00000518364.1
ENST00000520040.5
ENST00000522038.5
ENST00000523037.6
CDS TCA 72 bp AGCATAGGTTCTAGAATCAGACTGCCTGCCTGGATTTaGATCCTAACTCTGCCATTTACTAGCTACATAATC +
Preference number: 6 (lower is better)
Translates to: SIGSRIRLPAWI*ILTLPFTSYII
Trigger: GATTATGTAGCTAGTAAATGGCAGAGTTAGGATTCAAATCCAGGCAGGCAGTCTGATTCTAGAACCTATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520040.5
CDS CAA 90 bp CAAGGCATCTCCTTCTCCTATAGGATAAATGTATTACATGTATATTaGCTGCTTCAGTCTCCCCTCATCTATAAATTTCATTTCCTAGGG +
Preference number: 6 (lower is better)
Translates to: QGISFSYRINVLHVY*LLQSPLIYKFHFLG
Trigger: CCCTAGGAAATGAAATTTATAGATGAGGGGAGACTGAAGCAGCAAATATACATGTAATACATTTATCCTATAGGAGAAGGAGATGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520040.5
CDS CAA 90 bp AAATCAAGTGACTTGTCTAAGACCAGAGGTTTGCAAGAGACAAAGTaGGAATTCAAAGAACAGAGAAGTATGATACACCTGATACAATGT +
Preference number: 6 (lower is better)
Translates to: KSSDLSKTRGLQETK*EFKEQRSMIHLIQC
Trigger: ACATTGTATCAGGTGTATCATACTTCTCTGTTCTTTGAATTCCAACTTTGTCTCTTGCAAACCTCTGGTCTTAGACAAGTCACTTGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520040.5